BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032830
MYAFLALFAVGELLVFATQGPVNFICLHCVKPSIRPLSMAISTVSIHIFGDVPSSPLVGV
LQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKFSEDNEDKVSRIERSKTTPLLED
EKAETTQACAEP

High Scoring Gene Products

Symbol, full name Information P value
AT5G64500 protein from Arabidopsis thaliana 3.4e-45
AT2G22730 protein from Arabidopsis thaliana 8.0e-37
AT5G65687 protein from Arabidopsis thaliana 2.7e-36

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032830
        (132 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2179401 - symbol:AT5G64500 "AT5G64500" species...   475  3.4e-45   1
TAIR|locus:2066045 - symbol:AT2G22730 "AT2G22730" species...   396  8.0e-37   1
TAIR|locus:504954889 - symbol:AT5G65687 "AT5G65687" speci...   391  2.7e-36   1


>TAIR|locus:2179401 [details] [associations]
            symbol:AT5G64500 "AT5G64500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0016020 "membrane" evidence=ISS] [GO:0006635
            "fatty acid beta-oxidation" evidence=RCA] [GO:0016126 "sterol
            biosynthetic process" evidence=RCA] [GO:0016558 "protein import
            into peroxisome matrix" evidence=RCA] [GO:0046520 "sphingoid
            biosynthetic process" evidence=RCA] InterPro:IPR011701 Pfam:PF07690
            GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0031902
            GO:GO:0005765 GO:GO:0006869 GO:GO:0055085 InterPro:IPR016196
            SUPFAM:SSF103473 InterPro:IPR020846 PROSITE:PS50850 EMBL:AB010076
            EMBL:AB025640 HOGENOM:HOG000265160 EMBL:AY034956 EMBL:BT001973
            IPI:IPI00518419 RefSeq:NP_201255.1 UniGene:At.19158
            ProteinModelPortal:Q9FLG8 SMR:Q9FLG8 PaxDb:Q9FLG8 PRIDE:Q9FLG8
            EnsemblPlants:AT5G64500.1 GeneID:836571 KEGG:ath:AT5G64500
            TAIR:At5g64500 eggNOG:NOG305600 InParanoid:Q9FLG8 OMA:PRIMERD
            PhylomeDB:Q9FLG8 ProtClustDB:CLSN2686269 Genevestigator:Q9FLG8
            Uniprot:Q9FLG8
        Length = 484

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 94/121 (77%), Positives = 108/121 (89%)

Query:     1 MYAFLALFAVGELLVFATQGPVNFICLHCVKPSIRPLSMAISTVSIHIFGDVPSSPLVGV 60
             MYAFLALFAVGELLVFATQGPVNFI LHCVKPS+RPL+MA+STVSIHIFGDVPSSPLVGV
Sbjct:   365 MYAFLALFAVGELLVFATQGPVNFIVLHCVKPSLRPLAMAMSTVSIHIFGDVPSSPLVGV 424

Query:    61 LQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDKFSEDNE-DKVSRIERSKTTPLLE 119
             LQD VNNWR T+L+LT +LFPAAAIW IGIFL+SVD+++ED+E D V+R   S   PLL+
Sbjct:   425 LQDYVNNWRVTSLVLTFVLFPAAAIWSIGIFLNSVDRYNEDSEPDAVTR--ESTAAPLLQ 482

Query:   120 D 120
             +
Sbjct:   483 E 483


>TAIR|locus:2066045 [details] [associations]
            symbol:AT2G22730 "AT2G22730" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006869 GO:GO:0005743
            GO:GO:0055085 InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AC006340
            InterPro:IPR020846 PROSITE:PS50850 HOGENOM:HOG000265160
            IPI:IPI00536492 PIR:B84616 RefSeq:NP_179858.2 UniGene:At.39397
            ProteinModelPortal:F4IKF6 EnsemblPlants:AT2G22730.1 GeneID:816803
            KEGG:ath:AT2G22730 TAIR:At2g22730 eggNOG:NOG261370
            InParanoid:Q9ZQ41 OMA:QTVFISC Uniprot:F4IKF6
        Length = 510

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 76/102 (74%), Positives = 91/102 (89%)

Query:     1 MYAFLALFAVGELLVFATQGPVNFICLHCVKPSIRPLSMAISTVSIHIFGDVPSSPLVGV 60
             +Y F+ALFA+GELLVFATQ PVN++CLHCVKPS+RPLSMAISTV+IHIFGDVPSSPLVG+
Sbjct:   390 LYGFIALFALGELLVFATQAPVNYVCLHCVKPSLRPLSMAISTVAIHIFGDVPSSPLVGI 449

Query:    61 LQDRVNNWRETALILTAILFPAAAIWFIG-IFLHSVDKFSED 101
             +QD +N+WR+T LILT+ILF AAAIWFIG I L+S   +S D
Sbjct:   450 VQDHINSWRKTTLILTSILFLAAAIWFIGKINLNSF--YSND 489


>TAIR|locus:504954889 [details] [associations]
            symbol:AT5G65687 "AT5G65687" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB010075 EMBL:AL021684
            GO:GO:0031902 GO:GO:0005765 GO:GO:0006869 GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 EMBL:BT011621 EMBL:BT014809
            IPI:IPI00539504 IPI:IPI00548188 PIR:T05899 RefSeq:NP_680469.1
            UniGene:At.45472 ProteinModelPortal:Q6NMN6 PRIDE:Q6NMN6
            EnsemblPlants:AT5G65687.1 GeneID:836697 KEGG:ath:AT5G65687
            TAIR:At5g65687 HOGENOM:HOG000265160 InParanoid:Q6NMN6 OMA:FHANDAQ
            PhylomeDB:Q6NMN6 Genevestigator:Q6NMN6 Uniprot:Q6NMN6
        Length = 492

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 76/117 (64%), Positives = 96/117 (82%)

Query:     1 MYAFLALFAVGELLVFATQGPVNFICLHCVKPSIRPLSMAISTVSIHIFGDVPSSPLVGV 60
             MYAF+ALFAVGE+L+FA Q PVNF+CLHCV+P++RPLSMA STV IHI GDVPSSPL G 
Sbjct:   371 MYAFIALFAVGEILIFAPQAPVNFVCLHCVRPNLRPLSMASSTVLIHILGDVPSSPLYGK 430

Query:    61 LQDRVNNWRETALILTAILFPAAAIWFIGIFLHSVDK---FSEDNEDKVSRIERSKT 114
             +QD + NWR++ LI+T+ILF AA IW IGIF++SVD+    SED+E +  ++E SKT
Sbjct:   431 MQDHLKNWRKSTLIITSILFLAAIIWGIGIFMNSVDRSNEVSEDDEVEEDKLE-SKT 486


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      132       132   0.00091  102 3  11 22  0.50    30
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  135 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.33u 0.08s 15.41t   Elapsed:  00:00:01
  Total cpu time:  15.33u 0.08s 15.41t   Elapsed:  00:00:01
  Start:  Fri May 10 05:20:27 2013   End:  Fri May 10 05:20:28 2013

Back to top