BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032832
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2N923|RL32_ERYLH 50S ribosomal protein L32 OS=Erythrobacter litoralis (strain
HTCC2594) GN=rpmF PE=3 SV=1
Length = 59
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+KVS H+RG R +LK V C +CG +K PH C
Sbjct: 1 MAVPKRKVSPHRRGNRRAHDSLK-VEAFHECNNCGELKRPHNMC 43
>sp|Q2RTT0|RL32_RHORT 50S ribosomal protein L32 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rpmF PE=3 SV=1
Length = 61
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCCS 126
MAVPKKK S+ +R +R ALKP C +CG +K PH C S
Sbjct: 1 MAVPKKKTSKSRRDMRRSHHALKP-SAYGECPNCGELKRPHHVCTS 45
>sp|Q2W4R9|RL32_MAGSA 50S ribosomal protein L32 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rpmF PE=3 SV=1
Length = 60
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPKKK S+ +R +R AL V C +CG VKLPH C
Sbjct: 1 MAVPKKKTSKSRRDMRRAHHALVNV-TGAECPNCGEVKLPHHVC 43
>sp|Q1GT88|RL32_SPHAL 50S ribosomal protein L32 OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=rpmF PE=3 SV=1
Length = 59
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+K S KRG+R +LK V C +CG +K PH C
Sbjct: 1 MAVPKRKTSPSKRGMRRSHDSLK-VEAFQECPNCGELKRPHNLC 43
>sp|Q0BTE2|RL32_GRABC 50S ribosomal protein L32 OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=rpmF PE=3 SV=1
Length = 70
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPKKK S +RG+R +AL C +CG +K PH C
Sbjct: 1 MAVPKKKTSPSRRGMRRSHQALTG-EAYTECSNCGELKRPHHVC 43
>sp|A6TRU4|RL32_ALKMQ 50S ribosomal protein L32 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rpmF PE=3 SV=1
Length = 59
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+K S+ KR +R + P V+C C KLPH C
Sbjct: 1 MAVPKRKTSKSKRDMRRASNSKFVAPGYVKCPQCHETKLPHRVC 44
>sp|A8EZX4|RL32_RICCK 50S ribosomal protein L32 OS=Rickettsia canadensis (strain McKiel)
GN=rpmF PE=3 SV=1
Length = 66
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ KR +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSKRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|Q5FUN5|RL32_GLUOX 50S ribosomal protein L32 OS=Gluconobacter oxydans (strain 621H)
GN=rpmF PE=3 SV=1
Length = 70
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+K + +RG+R +AL V C +CG +K PH C
Sbjct: 1 MAVPKRKTTPSRRGMRRSHQAL-GVEAHAECSNCGEMKRPHHVC 43
>sp|Q28RF9|RL32_JANSC 50S ribosomal protein L32 OS=Jannaschia sp. (strain CCS1) GN=rpmF
PE=3 SV=1
Length = 67
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK K++R KRG+R AL C +CG +K PH C
Sbjct: 1 MAVPKSKITRSKRGMRRAHDALVAANP-NECPNCGELKRPHHVC 43
>sp|Q2G5R9|RL32_NOVAD 50S ribosomal protein L32 OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=rpmF PE=3 SV=1
Length = 59
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+K S +RG+R AL C +CG +K PH C
Sbjct: 1 MAVPKRKTSPSRRGMRRSHDAL-SAEAFHECSNCGELKRPHMLC 43
>sp|Q68VX6|RL32_RICTY 50S ribosomal protein L32 OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rpmF PE=3 SV=1
Length = 65
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ KR +R AL V V+V ++ G KLPH
Sbjct: 1 MAVPKKKTSKSKRNMRRSHLALGKVNVVVDAQT-GEYKLPHHISL 44
>sp|B2IE54|RL32_BEII9 50S ribosomal protein L32 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpmF PE=3
SV=1
Length = 63
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPH 121
MAVPK+K SR KRG R A+K P + K G ++ PH
Sbjct: 1 MAVPKRKTSRMKRGFRRSADAIK-APTYIEDKDSGELRRPH 40
>sp|B6IMR7|RL32_RHOCS 50S ribosomal protein L32 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rpmF PE=3 SV=1
Length = 60
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPKKK S+ +R +R ALK C +CG +K PH C
Sbjct: 1 MAVPKKKTSKSRRDMRRSHHALKG-SAYGECPNCGELKRPHHVC 43
>sp|Q1RKA6|RL32_RICBR 50S ribosomal protein L32 OS=Rickettsia bellii (strain RML369-C)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|A8GY07|RL32_RICB8 50S ribosomal protein L32 OS=Rickettsia bellii (strain OSU 85-389)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|Q4UK48|RL32_RICFE 50S ribosomal protein L32 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=rpmF PE=3 SV=1
Length = 66
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|A8GPW2|RL32_RICAH 50S ribosomal protein L32 OS=Rickettsia akari (strain Hartford)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|Q9ZCH0|RL32_RICPR 50S ribosomal protein L32 OS=Rickettsia prowazekii (strain Madrid
E) GN=rpmF PE=3 SV=3
Length = 65
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ KR +R AL + VIV + G KLPH
Sbjct: 1 MAVPKKKTSKSKRNMRRSHLALGKINVIVDSHT-GEYKLPHHISL 44
>sp|A1UR57|RL32_BARBK 50S ribosomal protein L32 OS=Bartonella bacilliformis (strain ATCC
35685 / KC583) GN=rpmF PE=3 SV=1
Length = 61
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKDSGELRRPHHI 42
>sp|B5ZU94|RL32_RHILW 50S ribosomal protein L32 OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=rpmF PE=3 SV=1
Length = 61
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q1MAD1|RL32_RHIL3 50S ribosomal protein L32 OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=rpmF PE=3 SV=1
Length = 61
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q2K327|RL32_RHIEC 50S ribosomal protein L32 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rpmF PE=3 SV=1
Length = 61
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|B3PR77|RL32_RHIE6 50S ribosomal protein L32 OS=Rhizobium etli (strain CIAT 652)
GN=rpmF PE=3 SV=1
Length = 61
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q98FG9|RL32_RHILO 50S ribosomal protein L32 OS=Rhizobium loti (strain MAFF303099)
GN=rpmF PE=3 SV=1
Length = 60
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGEMRRPHHI 42
>sp|A8GTP3|RL32_RICRS 50S ribosomal protein L32 OS=Rickettsia rickettsii (strain Sheila
Smith) GN=rpmF PE=3 SV=1
Length = 66
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|B0BV81|RL32_RICRO 50S ribosomal protein L32 OS=Rickettsia rickettsii (strain Iowa)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|C4K1E1|RL32_RICPU 50S ribosomal protein L32 OS=Rickettsia peacockii (strain Rustic)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|Q92GC0|RL32_RICCN 50S ribosomal protein L32 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rpmF PE=3 SV=3
Length = 66
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|C3PLQ4|RL32_RICAE 50S ribosomal protein L32 OS=Rickettsia africae (strain ESF-5)
GN=rpmF PE=3 SV=1
Length = 66
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCC 125
MAVPKKK S+ +R +R AL V VIV ++ G KLPH
Sbjct: 1 MAVPKKKTSKSRRNMRRSHLALGKVNVIVDSQT-GEYKLPHHVSL 44
>sp|A6WXZ4|RL32_OCHA4 50S ribosomal protein L32 OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=rpmF PE=3 SV=1
Length = 59
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q92L25|RL32_RHIME 50S ribosomal protein L32 OS=Rhizobium meliloti (strain 1021)
GN=rpmF PE=3 SV=1
Length = 61
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P + K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYIEDKNSGELRRPHHI 42
>sp|A6UE65|RL32_SINMW 50S ribosomal protein L32 OS=Sinorhizobium medicae (strain WSM419)
GN=rpmF PE=3 SV=1
Length = 61
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P + K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYIEDKNSGELRRPHHI 42
>sp|Q11CS8|RL32_MESSB 50S ribosomal protein L32 OS=Mesorhizobium sp. (strain BNC1)
GN=rpmF PE=3 SV=1
Length = 60
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYVEDKNSGELRRPHHV 42
>sp|Q6G1X6|RL32_BARHE 50S ribosomal protein L32 OS=Bartonella henselae (strain ATCC 49882
/ Houston 1) GN=rpmF PE=3 SV=1
Length = 59
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P + K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYIEDKNSGELRRPHHI 42
>sp|Q6G107|RL32_BARQU 50S ribosomal protein L32 OS=Bartonella quintana (strain Toulouse)
GN=rpmF PE=3 SV=1
Length = 59
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S KRG+R ALK P + K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSKRGMRRSADALK-APTYIEDKNSGELRRPHHI 42
>sp|B0S1M9|RL32_FINM2 50S ribosomal protein L32 OS=Finegoldia magna (strain ATCC 29328)
GN=rpmF PE=3 SV=1
Length = 62
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
MAVPK+K S+ +R R P I C +CG KLPH C
Sbjct: 1 MAVPKRKTSKTRRDKRRASSYKLPRVTITTCPNCGSPKLPHRVC 44
>sp|P25348|RM32_YEAST 54S ribosomal protein L32, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MRPL32 PE=1
SV=1
Length = 183
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 74 FAGSMELMAVPKKKVSRHKRGIRN---GPKALKPVPVIVRCKSCGRVKLPHFFC--CSGE 128
F+ + L+AVPKKKVS K+ + G K LK + + +C SCG K + C C G+
Sbjct: 64 FSNNGILLAVPKKKVSHQKKRQKLYGPGKKQLKMIHHLNKCPSCGHYKRANTLCMYCVGQ 123
>sp|Q4AA63|RL32_MYCHJ 50S ribosomal protein L32 OS=Mycoplasma hyopneumoniae (strain J /
ATCC 25934 / NCTC 10110) GN=rpmF PE=3 SV=1
Length = 65
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 80 LMAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
+ VPK+K S+ ++ R ALK +P +V C +C KLPH C
Sbjct: 1 MAIVPKRKTSKQRKHKRQSHSALK-LPNLVSCSNCANKKLPHHIC 44
>sp|Q4A890|RL32_MYCH7 50S ribosomal protein L32 OS=Mycoplasma hyopneumoniae (strain 7448)
GN=rpmF PE=3 SV=1
Length = 65
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 80 LMAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFC 124
+ VPK+K S+ ++ R ALK +P +V C +C KLPH C
Sbjct: 1 MAIVPKRKTSKQRKHKRQSHSALK-LPNLVSCSNCANKKLPHHIC 44
>sp|Q5GS20|RL32_WOLTR 50S ribosomal protein L32 OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=rpmF PE=3 SV=2
Length = 60
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFFCCSGERK 130
MAVPK+K S+ +R + A+KP ++V C + G LPH G K
Sbjct: 1 MAVPKRKKSKSRRNMHRSHHAIKPKNIVV-CTTTGEFMLPHSIAVDGSYK 49
>sp|P66206|RL32_BRUSU 50S ribosomal protein L32 OS=Brucella suis biovar 1 (strain 1330)
GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|A9WWP9|RL32_BRUSI 50S ribosomal protein L32 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|A5VSC1|RL32_BRUO2 50S ribosomal protein L32 OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|P66205|RL32_BRUME 50S ribosomal protein L32 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|C0RF29|RL32_BRUMB 50S ribosomal protein L32 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|A9M817|RL32_BRUC2 50S ribosomal protein L32 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q57BA8|RL32_BRUAB 50S ribosomal protein L32 OS=Brucella abortus biovar 1 (strain
9-941) GN=rpmF PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|Q2YLD3|RL32_BRUA2 50S ribosomal protein L32 OS=Brucella abortus (strain 2308) GN=rpmF
PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|B2S7K3|RL32_BRUA1 50S ribosomal protein L32 OS=Brucella abortus (strain S19) GN=rpmF
PE=3 SV=1
Length = 59
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K+ G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKNSGELRRPHHI 42
>sp|B1LV66|RL32_METRJ 50S ribosomal protein L32 OS=Methylobacterium radiotolerans (strain
ATCC 27329 / DSM 1819 / JCM 2831) GN=rpmF PE=3 SV=1
Length = 62
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 81 MAVPKKKVSRHKRGIRNGPKALKPVPVIVRCKSCGRVKLPHFF 123
MAVPK+K S +RG+R ALK P V K G ++ PH
Sbjct: 1 MAVPKRKTSPSRRGMRRSADALK-APTYVEDKDSGELRRPHHI 42
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,973,731
Number of Sequences: 539616
Number of extensions: 2227719
Number of successful extensions: 6548
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 6381
Number of HSP's gapped (non-prelim): 321
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)