Your job contains 1 sequence.
>032833
MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL
EVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRADAPIWWKWGRKRLLYQII
KGHLRVRSRGVN
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032833
(132 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370... 273 5.0e-23 1
ASPGD|ASPL0000014944 - symbol:hdaA species:162425 "Emeric... 174 4.3e-12 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 165 4.4e-11 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 165 4.4e-11 1
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1... 162 1.4e-10 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 157 2.5e-10 1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp... 159 2.9e-10 1
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety... 147 5.2e-09 1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"... 142 1.9e-08 1
POMBASE|SPBC800.03 - symbol:clr3 "histone deacetylase (cl... 139 2.1e-08 1
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s... 141 2.6e-08 1
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s... 141 2.6e-08 1
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"... 138 5.0e-08 1
MGI|MGI:2158340 - symbol:Hdac10 "histone deacetylase 10" ... 131 1.4e-07 1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso... 133 1.7e-07 1
UNIPROTKB|E2RS82 - symbol:HDAC10 "Uncharacterized protein... 129 1.8e-07 1
UNIPROTKB|G4NCI1 - symbol:MGG_01076 "Histone deacetylase ... 130 2.2e-07 1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"... 132 2.2e-07 1
UNIPROTKB|E2RSA8 - symbol:HDAC10 "Uncharacterized protein... 129 2.3e-07 1
UNIPROTKB|Q0VD49 - symbol:HDAC10 "Uncharacterized protein... 128 3.0e-07 1
ZFIN|ZDB-GENE-030131-5464 - symbol:hdac10 "histone deacet... 125 7.0e-07 1
UNIPROTKB|Q969S8 - symbol:HDAC10 "Histone deacetylase 10"... 124 8.0e-07 1
UNIPROTKB|F1RXT2 - symbol:LOC100518786 "Uncharacterized p... 124 8.1e-07 1
UNIPROTKB|I3LDD6 - symbol:LOC100518786 "Uncharacterized p... 124 8.1e-07 1
WB|WBGene00001837 - symbol:hda-4 species:6239 "Caenorhabd... 125 8.8e-07 1
UNIPROTKB|H9KZJ3 - symbol:HDAC10 "Uncharacterized protein... 123 9.2e-07 1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s... 125 9.9e-07 1
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd... 125 9.9e-07 1
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c... 125 9.9e-07 1
ZFIN|ZDB-GENE-061013-95 - symbol:hdac4 "histone deacetyla... 119 4.7e-06 1
FB|FBgn0041210 - symbol:HDAC4 "HDAC4" species:7227 "Droso... 112 3.3e-05 1
UNIPROTKB|F5GX36 - symbol:HDAC4 "Histone deacetylase 4" s... 103 0.00014 1
UNIPROTKB|Q80ZH1 - symbol:HDAC5 "Histone deacetylase 5" s... 104 0.00020 1
TAIR|locus:2159461 - symbol:HDA18 "AT5G61070" species:370... 101 0.00024 1
UNIPROTKB|P56524 - symbol:HDAC4 "Histone deacetylase 4" s... 103 0.00025 1
RGD|1310748 - symbol:Hdac9 "histone deacetylase 9" specie... 98 0.00032 1
UNIPROTKB|F1MYR0 - symbol:HDAC4 "Uncharacterized protein"... 102 0.00032 1
UNIPROTKB|H0YH91 - symbol:HDAC7 "Histone deacetylase 7" s... 96 0.00038 1
UNIPROTKB|F1LQG9 - symbol:Hdac5 "Protein Hdac5" species:1... 99 0.00049 1
UNIPROTKB|F1LM64 - symbol:Hdac5 "Protein Hdac5" species:1... 99 0.00055 1
UNIPROTKB|F1LSL9 - symbol:Hdac5 "Protein Hdac5" species:1... 99 0.00055 1
UNIPROTKB|J9P9N5 - symbol:HDAC5 "Uncharacterized protein"... 99 0.00068 1
UNIPROTKB|F1P6I3 - symbol:HDAC5 "Uncharacterized protein"... 99 0.00070 1
UNIPROTKB|F1MNA5 - symbol:HDAC5 "Uncharacterized protein"... 99 0.00071 1
UNIPROTKB|F1PK81 - symbol:HDAC7 "Uncharacterized protein"... 98 0.00075 1
UNIPROTKB|F1N616 - symbol:HDAC7 "Uncharacterized protein"... 98 0.00078 1
UNIPROTKB|F1S1J4 - symbol:HDAC5 "Uncharacterized protein"... 96 0.00079 1
UNIPROTKB|F6X8E7 - symbol:HDAC9 "Uncharacterized protein"... 98 0.00085 1
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 273 (101.2 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 64/123 (52%), Positives = 79/123 (64%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELG-DSAPSKSGLVTV 59
MT ML L GGK+LVILEGGYNLRSIS+SAT+VIKVLLGENP EL + PS +GL TV
Sbjct: 424 MTQMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTV 483
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRADAPIWWKWGRKRLLYQI 119
L+VL IQ+ FWPSLA +++L S E ENK ++ + + G K Q+
Sbjct: 484 LDVLNIQLEFWPSLAISYSKLLSELEARLIENKSEKSDEKEGCSGSDMVEMGTKEAFVQL 543
Query: 120 IKG 122
G
Sbjct: 544 SLG 546
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 174 (66.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
MTHML L+ GK+ V LEGGYN RSIS SA +V K L+G NP L + PS++ + T+
Sbjct: 420 MTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMG-NPPDRLSFTCPSEAAISTIR 478
Query: 61 EVLKIQMNFWPSLASRFTELQSLW 84
V IQ ++W + + + + +W
Sbjct: 479 RVSSIQSDYWKCMYPKAIKNEGVW 502
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 165 (63.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 46/108 (42%), Positives = 62/108 (57%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
MTH L ++ GKL VILEGGYNL SIS SA +V KVL+GE P + P + V
Sbjct: 419 MTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTI-TLRPQAEAIEVVD 477
Query: 61 EVLKIQMNFWPSLASRFTELQSLWE-IY-AAENKKKQIKKIRRADAPI 106
EV+KIQ ++ SL + ++E +Y A+ +K K + AD PI
Sbjct: 478 EVIKIQSKYFKSLRNGIPN--GIFEDVYDLADVEKSNYKLVNIAD-PI 522
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 165 (63.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 46/108 (42%), Positives = 62/108 (57%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
MTH L ++ GKL VILEGGYNL SIS SA +V KVL+GE P + P + V
Sbjct: 419 MTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTI-TLRPQAEAIEVVD 477
Query: 61 EVLKIQMNFWPSLASRFTELQSLWE-IY-AAENKKKQIKKIRRADAPI 106
EV+KIQ ++ SL + ++E +Y A+ +K K + AD PI
Sbjct: 478 EVIKIQSKYFKSLRNGIPN--GIFEDVYDLADVEKSNYKLVNIAD-PI 522
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/107 (35%), Positives = 65/107 (60%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSG-LVTV 59
+TH+L L+GG++++ILEGGYNL SIS S + LLG+ P +L P +SG L ++
Sbjct: 764 LTHLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDPPP-QLTSLRPPQSGALASI 822
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRADAPI 106
EV+++ +W SL R +++ E + + IKK+ ++ +P+
Sbjct: 823 SEVIQVHRKYWRSL--RLMKMEDKEE---RSSSRLVIKKLPQSASPV 864
Score = 119 (46.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDS--APSKSGLVT 58
+TH L L+GGKL++ LEGGYNL +++ + + LLG+ P C + +S AP S +
Sbjct: 368 LTHFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGD-P-CPMLESPVAPCASAQTS 425
Query: 59 VLEVLKIQMNFWPSLASRFTELQSLWEI 86
+ L+ FW L R E Q E+
Sbjct: 426 ISCTLEALEPFWEVL-ERSVEPQDEDEV 452
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 157 (60.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGD--SAPSKSGLVT 58
MTHML +L+ G L V+LEGGYNL +I+ SA SV KVL+GE P EL D S P +
Sbjct: 358 MTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPD-ELPDPLSDPKPEVIEM 416
Query: 59 VLEVLKIQMNFW 70
+ +V+++Q +W
Sbjct: 417 IDKVIRLQSKYW 428
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 159 (61.0 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/107 (36%), Positives = 64/107 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSG-LVTV 59
+TH+L L+GG++++ILEGGYNL SIS S + LLG+ P +L P +SG LV++
Sbjct: 761 LTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDPPP-QLTLLRPPQSGALVSI 819
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRADAPI 106
EV+++ +W SL R +++ E + + IKK+ +P+
Sbjct: 820 SEVIQVHRKYWRSL--RLMKMEDKEE---CSSSRLVIKKLPPTASPV 861
Score = 127 (49.8 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSA--PSKSGLVT 58
+TH+L L+GGKL++ LEGGYNLR+++ ++ + LLG+ P C + +S P S +
Sbjct: 365 LTHLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGD-P-CPMLESCVVPCASAQTS 422
Query: 59 VLEVLKIQMNFWPSLASRFTELQSLWEIYAA 89
+ L+ FW L R E Q E+ A
Sbjct: 423 IYCTLEALEPFWEVL-ERSVETQEEDEVEEA 452
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 147 (56.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSK-SGLVTV 59
+TH L +L+ G++L+ILEGGYNL SIS S + +LLG++P L P K S V++
Sbjct: 725 LTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSPP-SLDHLTPLKTSATVSI 783
Query: 60 LEVLKIQMNFWPSLASRFTE 79
VL+ FW SL E
Sbjct: 784 NNVLRAHAPFWSSLRVNIPE 803
Score = 122 (48.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDS-APSKSGLVTV 59
+THML ++ G+L++ LEGGYNL+S + + ++ LLG+ P L S AP +S L ++
Sbjct: 343 LTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASMRSLLGD-PCPHLPSSGAPCESALKSI 401
Query: 60 LEVLKIQMNFWPSL 73
+ + FW SL
Sbjct: 402 SKTISDLYPFWKSL 415
Score = 35 (17.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 96 IKKIRRADAPIW 107
I + RA AP W
Sbjct: 783 INNVLRAHAPFW 794
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 142 (55.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSG-LVTV 59
+TH+L L+ G++++ILEGGYNL SIS S + + LLG+ P L S P SG L ++
Sbjct: 775 LTHLLMGLANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPL-LTLSRPPLSGALASI 833
Query: 60 LEVLKIQMNFWPSL 73
E +++ +W SL
Sbjct: 834 TETIQVHRRYWRSL 847
Score = 130 (50.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCEL--GDSAPSKSGLVT 58
+TH+L L+GGKL++ LEGGYNLR+++ ++ + LLG+ P C + SAP S +
Sbjct: 380 LTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGD-P-CPILESPSAPCPSAQAS 437
Query: 59 VLEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQ 95
+ L+ FW L L+ +I E +K+
Sbjct: 438 LFCALEALEPFWEVLVRSAEALEE--DILEEEKAEKE 472
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 139 (54.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 32/70 (45%), Positives = 42/70 (60%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
MT ML L+ GK+ + LEGGYNL SIS+SA +V + LLG PG L + + T+
Sbjct: 347 MTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPG-RLHTTYACPQAVATIN 405
Query: 61 EVLKIQMNFW 70
V KIQ +W
Sbjct: 406 HVTKIQSQYW 415
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+TH+L L+ G++++ILEGGYNL SIS S + + LLG+ P P L ++
Sbjct: 762 LTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASIT 821
Query: 61 EVLKIQMNFWPSL 73
E +++ +W SL
Sbjct: 822 ETIQVHRRYWRSL 834
Score = 133 (51.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDS--APSKSGLVT 58
+TH+L L+GGKL++ LEGGYNLR+++ ++ + LLG+ P C + +S AP +S +
Sbjct: 366 LTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGD-P-CPMLESPGAPCRSAQAS 423
Query: 59 VLEVLKIQMNFWPSLASRFTE 79
V L+ FW L R TE
Sbjct: 424 VSCALEALEPFWEVLV-RSTE 443
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+TH+L L+ G++++ILEGGYNL SIS S + + LLG+ P P L ++
Sbjct: 776 LTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASIT 835
Query: 61 EVLKIQMNFWPSL 73
E +++ +W SL
Sbjct: 836 ETIQVHRRYWRSL 848
Score = 133 (51.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDS--APSKSGLVT 58
+TH+L L+GGKL++ LEGGYNLR+++ ++ + LLG+ P C + +S AP +S +
Sbjct: 380 LTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGD-P-CPMLESPGAPCRSAQAS 437
Query: 59 VLEVLKIQMNFWPSLASRFTE 79
V L+ FW L R TE
Sbjct: 438 VSCALEALEPFWEVLV-RSTE 457
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 138 (53.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+TH+L L+ G++++ILEGGYNL SIS S + + LLG++P P L ++
Sbjct: 771 LTHLLMGLANGRIILILEGGYNLISISESMAACTRSLLGDSPPLLTLLRPPLSRALASIA 830
Query: 61 EVLKIQMNFWPSLASRFTELQ 81
E +I +W SL R T+++
Sbjct: 831 ETTQIHRRYWRSL--RVTKVE 849
Score = 125 (49.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN-PGCEL-GDSAPS-KSGLV 57
+TH+L L+GGKL++ LEGGYNLRS++ ++ + LLG+ P E G PS ++ L
Sbjct: 376 LTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPLLEFPGAPCPSAQASLS 435
Query: 58 TVLEVLKIQMNFWPSL 73
LE L+ FW L
Sbjct: 436 CALEALE---PFWEVL 448
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+T +L L+GG++ +LEGGY+L S++ S +++ LLG+ LG P +S L ++
Sbjct: 285 LTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPTPPLLGLMVPCQSALESIQ 344
Query: 61 EVLKIQMNFWPSL 73
V Q +W SL
Sbjct: 345 SVQTAQTPYWTSL 357
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 133 (51.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN-PGCELGDSAPSKSGLV-- 57
+TH L+AL+ G+++V LEGGYN+ SIS + T K LLG+ P +LG +A K V
Sbjct: 824 LTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAF 883
Query: 58 -----TVLEVLKIQMNFWPSL 73
++ + L++Q N W SL
Sbjct: 884 QSCVESLQQCLQVQRNHWRSL 904
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 129 (50.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+T +L L+GG++ +LEGGY+L S+S S V++ LLG+ G P +S L ++
Sbjct: 167 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQ 226
Query: 61 EVLKIQMNFWPSL 73
V Q W SL
Sbjct: 227 SVRAAQAPHWTSL 239
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAP--SKSGLVT 58
MTHML +L+ G++ V LEGGYNL +IS SA +V + L+GE P ++G ++P ++
Sbjct: 393 MTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMGEPPP-KMGMASPKINREAARL 451
Query: 59 VLEVLKIQMNFW 70
+ +V Q +W
Sbjct: 452 LAQVQAYQAPYW 463
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 132 (51.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/112 (30%), Positives = 61/112 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDS--APSKSGLVT 58
+TH+L L+ GKL++ LEGGYNL S++ ++ + LLG+ P C + +S AP S +
Sbjct: 366 LTHLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGD-P-CPVLESPGAPCPSAQAS 423
Query: 59 VLEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRA---DAPIW 107
+ L+ FW SL L+ + + ++K+ +++ ++ PIW
Sbjct: 424 LSCTLEALEPFWESLVRSVESLEEKDTVEKDDVEEKEEERLPQSPELSVPIW 475
Score = 121 (47.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGL-VTV 59
+TH L L+ G +++ILEGGYNL SIS S + + LLG+ P L P SG ++
Sbjct: 762 LTHQLMGLANGHIILILEGGYNLTSISESMAACTRSLLGD-PLPLLTRLRPPLSGAQASI 820
Query: 60 LEVLKIQMNFWPSL 73
+ +++ +W SL
Sbjct: 821 TKTIQVHRRYWRSL 834
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 129 (50.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+T +L L+GG++ +LEGGY+L S+S S V++ LLG+ G P +S L ++
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDPVPPLSGPMEPHRSALESIQ 344
Query: 61 EVLKIQMNFWPSL 73
V Q W SL
Sbjct: 345 SVRAAQAPHWTSL 357
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 128 (50.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCEL-GDSAPSKSGLVTV 59
+TH+L L+GG++ +LEGGY+L S+S S +++ LLG+ P L G P S L ++
Sbjct: 285 LTHLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVRALLGD-PALPLSGPMEPHGSALESL 343
Query: 60 LEVLKIQMNFWPSL 73
V Q W SL
Sbjct: 344 QCVRAAQAPHWVSL 357
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 125 (49.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+TH+L L+ GK+ V+LEGGYNL S+ S + LLG+ G S L ++
Sbjct: 340 LTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQ 399
Query: 61 EVLKIQMNFWPS 72
V +Q ++W S
Sbjct: 400 NVRNVQSSYWSS 411
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 124 (48.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCEL-GDSAPSKSGLVTV 59
+T +L L+GG++ +LEGGY+L S++ S ++ LLG+ P L G AP +S L ++
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGD-PAPPLSGPMAPCQSALESI 343
Query: 60 LEVLKIQMNFWPSL 73
Q W SL
Sbjct: 344 QSARAAQAPHWKSL 357
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 124 (48.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCEL-GDSAPSKSGLVTV 59
+T +L L+GG++ +LEGGY+L S+S S +++ LLG+ P L G P S L ++
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGD-PAPPLSGPMVPHGSALQSI 343
Query: 60 LEVLKIQMNFWPSL 73
V Q W SL
Sbjct: 344 QSVRAAQAPHWMSL 357
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 124 (48.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCEL-GDSAPSKSGLVTV 59
+T +L L+GG++ +LEGGY+L S+S S +++ LLG+ P L G P S L ++
Sbjct: 287 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGD-PAPPLSGPMVPHGSALQSI 345
Query: 60 LEVLKIQMNFWPSL 73
V Q W SL
Sbjct: 346 QSVRAAQAPHWMSL 359
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 125 (49.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGC-ELG----DSAPSKSG 55
MT L + GK+++ LEGGY+L+SIS +A ++ L+GE+ L +S P+ S
Sbjct: 760 MTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALIGESDDAGRLSSVALESLPNPSA 819
Query: 56 LVTVLEVLKIQMNFWPSL 73
+ T+ +V+ I ++WP+L
Sbjct: 820 VETLQKVIAIHKSYWPAL 837
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 123 (48.4 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
+TH L L+ GKL VILEGGY+L+S+S S +K LL + G+ AP S + ++
Sbjct: 287 LTHFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKTLLRDPLPQVTGEMAPCLSAIESIQ 346
Query: 61 EVLKIQMNFW 70
V +W
Sbjct: 347 NVRAAHKPYW 356
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 125 (49.1 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGD------SAPSK- 53
MT+ L++L+GG+++ +LEGGYNL SIS+SA +V +VL + L + + P K
Sbjct: 711 MTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKI 770
Query: 54 --SGLVTVLEVLKIQMNFWPSL 73
S + T+ EV +Q +W L
Sbjct: 771 ESSCIKTIREVCAVQQKYWSIL 792
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 5 LNALSGGKLLVILEGGYNLRSISSSATS-VIKVLLGENP-GCELGDSAPSKSGL---VTV 59
L +L+ G++LV+LEGGYN IS+ A ++VLLG P EL + AP +S + V++
Sbjct: 299 LKSLAQGRMLVVLEGGYN-HQISAVAVQRCVRVLLGYAPFSIELNE-APKESTVDSCVSL 356
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRAD 103
+ VL+ N + SR + + W I + RRAD
Sbjct: 357 VSVLRHHWNCFDYFPSRTSLRLAQWPIVNTKVIYNYDPTTRRAD 400
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 125 (49.1 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGD------SAPSK- 53
MT+ L++L+GG+++ +LEGGYNL SIS+SA +V +VL + L + + P K
Sbjct: 713 MTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKI 772
Query: 54 --SGLVTVLEVLKIQMNFWPSL 73
S + T+ EV +Q +W L
Sbjct: 773 ESSCIKTIREVCAVQQKYWSIL 794
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 5 LNALSGGKLLVILEGGYNLRSISSSATS-VIKVLLGENP-GCELGDSAPSKSGL---VTV 59
L +L+ G++LV+LEGGYN IS+ A ++VLLG P EL + AP +S + V++
Sbjct: 301 LKSLAQGRMLVVLEGGYN-HQISAVAVQRCVRVLLGYAPFSIELNE-APKESTVDSCVSL 358
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRAD 103
+ VL+ N + SR + + W I + RRAD
Sbjct: 359 VSVLRHHWNCFDYFPSRTSLRLAQWPIVNTKVIYNYDPTTRRAD 402
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 125 (49.1 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGD------SAPSK- 53
MT+ L++L+GG+++ +LEGGYNL SIS+SA +V +VL + L + + P K
Sbjct: 713 MTYQLSSLAGGRIITVLEGGYNLTSISNSAQAVCEVLQNRSMLRRLREEKEQFATKPQKI 772
Query: 54 --SGLVTVLEVLKIQMNFWPSL 73
S + T+ EV +Q +W L
Sbjct: 773 ESSCIKTIREVCAVQQKYWSIL 794
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 5 LNALSGGKLLVILEGGYNLRSISSSATS-VIKVLLGENP-GCELGDSAPSKSGL---VTV 59
L +L+ G++LV+LEGGYN IS+ A ++VLLG P EL + AP +S + V++
Sbjct: 301 LKSLAQGRMLVVLEGGYN-HQISAVAVQRCVRVLLGYAPFSIELNE-APKESTVDSCVSL 358
Query: 60 LEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKIRRAD 103
+ VL+ N + SR + + W I + RRAD
Sbjct: 359 VSVLRHHWNCFDYFPSRTSLRLAQWPIVNTKVIYNYDPTTRRAD 402
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 119 (46.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/99 (30%), Positives = 57/99 (57%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCE-LGDSAPSKSGLV 57
+T L L+GG+L++ LEGG++L +I ++ + + LLG +P E + P+ + +
Sbjct: 895 LTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPIPEDILQQRPNANAIQ 954
Query: 58 TVLEVLKIQMNFWPSLASRFTEL-QSLWEIYAAENKKKQ 95
++ +VL++Q +W SL + L SL E EN++ +
Sbjct: 955 SMEKVLEVQSKYWRSLQRSVSTLGYSLREAQRCENEEAE 993
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 112 (44.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELG----DSAPSKSGL 56
MT L L+ GK+++ LEGGY+L +I SA ++ LLG+ P + + P ++ +
Sbjct: 1125 MTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGD-PAAPIAKAELERPPCQNAI 1183
Query: 57 VTVLEVLKIQMNFWP 71
T+ + + IQ WP
Sbjct: 1184 NTLQKTIAIQQTHWP 1198
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 27/99 (27%), Positives = 56/99 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LLG +P E + P+ + +
Sbjct: 540 LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVR 599
Query: 58 TVLEVLKIQMNFWPSLA-SRFTELQSLWEIYAAENKKKQ 95
++ +V++I +W L + T +SL E EN++ +
Sbjct: 600 SMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQTCENEEAE 638
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 104 (41.7 bits), Expect = 0.00020, P = 0.00020
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + PS + +
Sbjct: 975 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVA 1034
Query: 58 TVLEVLKIQMNFWPSLASRF-TELQ-SLWEIYAAENKKKQ 95
T+ +V++IQ W S RF T L SL E A E ++ +
Sbjct: 1035 TLEKVIEIQSKHW-SCVQRFATGLGCSLQEAQAGETEEAE 1073
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 101 (40.6 bits), Expect = 0.00024, P = 0.00024
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGDSAPSKSGLVTVL 60
M L + GK+++ LEGGYNL S+ S+ + ++VLL + ++ P +S +
Sbjct: 344 MLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQ 403
Query: 61 EVLKIQMNFWPSLASRFTELQSLWEIYAAEN 91
V + +WPSL + ++L A N
Sbjct: 404 AVRERLCTYWPSLDASMASNENLKNPSAERN 434
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 103 (41.3 bits), Expect = 0.00025, P = 0.00025
Identities = 27/99 (27%), Positives = 56/99 (56%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LLG +P E + P+ + +
Sbjct: 956 LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVR 1015
Query: 58 TVLEVLKIQMNFWPSLA-SRFTELQSLWEIYAAENKKKQ 95
++ +V++I +W L + T +SL E EN++ +
Sbjct: 1016 SMEKVMEIHSKYWRCLQRTTSTAGRSLIEAQTCENEEAE 1054
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 98 (39.6 bits), Expect = 0.00032, P = 0.00032
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGENPGCELGD---SAPSKSGLV 57
+T L L+ G++ + LEGG++L +I ++ + I LLG PG D + + +
Sbjct: 366 LTKQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEPGSLEEDVLHQSVNTNAAA 425
Query: 58 TVLEVLKIQMNFWPSL 73
++ + ++IQ +W S+
Sbjct: 426 SLQKTIEIQSKYWKSI 441
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 102 (41.0 bits), Expect = 0.00032, P = 0.00032
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LLG +P E + P+ + +
Sbjct: 956 LTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVR 1015
Query: 58 TVLEVLKIQMNFWPSLAS-RFTELQSLWEIYAAENKKKQ 95
++ +V++I +W SL T SL E EN++ +
Sbjct: 1016 SMEKVIEIHSQYWRSLQRLASTAGYSLVEAQKCENEEAE 1054
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 96 (38.9 bits), Expect = 0.00038, P = 0.00038
Identities = 24/102 (23%), Positives = 51/102 (50%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCELG-DSAPSKSGLV 57
MT L L+GG +++ LEGG++L +I ++ + + LLG +P E G P+ + +
Sbjct: 255 MTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIR 314
Query: 58 TVLEVLKIQMNFWPSLASRFTELQSLWEIYAAENKKKQIKKI 99
++ V+++ +W + R W K++++ +
Sbjct: 315 SLEAVIRVHSKYWGCM-QRLASCPDSWVPRVPGADKEEVEAV 355
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 99 (39.9 bits), Expect = 0.00049, P = 0.00049
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + PS + +
Sbjct: 690 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVA 749
Query: 58 TVLEVLKIQMNFWPSLASRF-TELQ-SLWEIYAAENKKKQ 95
T+ +V++IQ W S RF T L SL E E ++ +
Sbjct: 750 TLEKVIEIQSKHW-SCVQRFATGLGCSLREAQTGEKEEAE 788
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 99 (39.9 bits), Expect = 0.00055, P = 0.00055
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + PS + +
Sbjct: 772 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVA 831
Query: 58 TVLEVLKIQMNFWPSLASRF-TELQ-SLWEIYAAENKKKQ 95
T+ +V++IQ W S RF T L SL E E ++ +
Sbjct: 832 TLEKVIEIQSKHW-SCVQRFATGLGCSLREAQTGEKEEAE 870
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 99 (39.9 bits), Expect = 0.00055, P = 0.00055
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + PS + +
Sbjct: 772 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVA 831
Query: 58 TVLEVLKIQMNFWPSLASRF-TELQ-SLWEIYAAENKKKQ 95
T+ +V++IQ W S RF T L SL E E ++ +
Sbjct: 832 TLEKVIEIQSKHW-SCVQRFATGLGCSLREAQTGEKEEAE 870
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 99 (39.9 bits), Expect = 0.00068, P = 0.00068
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + P+ + +
Sbjct: 954 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVA 1013
Query: 58 TVLEVLKIQMNFWPSLASRFTE-L-QSLWEIYAAENKKKQ 95
T+ +V++IQ W S RF L +SL E A E ++ +
Sbjct: 1014 TLEKVIEIQSKHW-SCVQRFAAGLGRSLREAQAGETEEAE 1052
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 99 (39.9 bits), Expect = 0.00070, P = 0.00070
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + P+ + +
Sbjct: 981 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVA 1040
Query: 58 TVLEVLKIQMNFWPSLASRFTE-L-QSLWEIYAAENKKKQ 95
T+ +V++IQ W S RF L +SL E A E ++ +
Sbjct: 1041 TLEKVIEIQSKHW-SCVQRFAAGLGRSLREAQAGETEEAE 1079
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 99 (39.9 bits), Expect = 0.00071, P = 0.00071
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + P+ + +
Sbjct: 989 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVA 1048
Query: 58 TVLEVLKIQMNFWPSLASRFTE-L-QSLWEIYAAENKKKQ 95
T+ +V++IQ W S RF L +SL E A E ++ +
Sbjct: 1049 TLEKVIEIQSKHW-SCVQRFAAGLGRSLREAQAGETEEAE 1087
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 98 (39.6 bits), Expect = 0.00075, P = 0.00075
Identities = 23/87 (26%), Positives = 46/87 (52%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCELG-DSAPSKSGLV 57
MT L +L+GG +++ LEGG++L +I ++ + + LLG +P E G P+ + +
Sbjct: 822 MTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIR 881
Query: 58 TVLEVLKIQMNFWPSLASRFTELQSLW 84
++ V+++ +W + R W
Sbjct: 882 SLEAVIRVHSKYWGCM-QRLASCPDSW 907
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 98 (39.6 bits), Expect = 0.00078, P = 0.00078
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGE--NPGCELG-DSAPSKSGLV 57
MT L +L+GG +++ LEGG++L +I ++ + + LLG +P E G P+ + +
Sbjct: 859 MTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIR 918
Query: 58 TVLEVLKIQMNFW---PSLASR 76
++ V+++ +W LASR
Sbjct: 919 SLEAVIRVHSEYWGCMQRLASR 940
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 96 (38.9 bits), Expect = 0.00079, P = 0.00079
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+GG++++ LEGG++L +I ++ + + LL P E + P+ + +
Sbjct: 526 LTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVA 585
Query: 58 TVLEVLKIQMNFWPSLASRFTE-L-QSLWEIYAAENKKKQ 95
T+ +V+ IQ W S RF L +SL E A E ++ +
Sbjct: 586 TLEKVIGIQSKHW-SCVQRFAAGLGRSLREAQAGETEEAE 624
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 98 (39.6 bits), Expect = 0.00085, P = 0.00085
Identities = 20/76 (26%), Positives = 45/76 (59%)
Query: 1 MTHMLNALSGGKLLVILEGGYNLRSISSSATSVIKVLLGEN--PGCE-LGDSAPSKSGLV 57
+T L L+ G +++ LEGG++L +I ++ + + LLG P E + P+ + ++
Sbjct: 938 LTKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVI 997
Query: 58 TVLEVLKIQMNFWPSL 73
++ ++++IQ +W S+
Sbjct: 998 SLQKIIEIQSKYWKSV 1013
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 132 0.00091 102 3 11 22 0.41 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 583 (62 KB)
Total size of DFA: 132 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.83u 0.10s 12.93t Elapsed: 00:00:01
Total cpu time: 12.84u 0.10s 12.94t Elapsed: 00:00:01
Start: Fri May 10 05:21:41 2013 End: Fri May 10 05:21:42 2013