Query 032836
Match_columns 132
No_of_seqs 18 out of 20
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 10:19:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032836.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032836hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iy1a1 d.3.1.7 (A:419-643) Se 32.6 8.1 0.00059 25.7 1.4 36 65-100 186-221 (225)
2 d1mlwa_ d.178.1.1 (A:) Tryptop 31.4 19 0.0014 27.6 3.6 58 71-129 49-123 (290)
3 d2o4ta1 a.69.4.1 (A:16-105) Un 27.7 22 0.0016 22.6 2.9 35 83-120 29-71 (90)
4 d2a1ja1 a.60.2.5 (A:837-898) D 24.7 19 0.0014 20.6 1.9 39 91-129 15-59 (62)
5 d1th0a_ d.3.1.7 (A:) Sentrin-s 23.4 18 0.0013 23.9 1.8 36 65-100 186-221 (226)
6 d1ylia1 d.38.1.1 (A:11-152) Pu 22.4 13 0.00098 24.2 1.0 26 65-91 110-135 (142)
7 d1toha_ d.178.1.1 (A:) Tyrosin 19.6 35 0.0026 26.7 3.1 57 72-129 50-123 (336)
8 d2a2ra1 a.45.1.1 (A:78-209) Cl 19.2 45 0.0033 19.3 2.9 28 88-116 49-77 (132)
9 d1c5ch2 b.1.1.2 (H:114-230) Im 19.0 11 0.00083 22.6 0.0 17 63-80 21-37 (103)
10 g2bi6.2 g.3.12.1 (L:,H:1-7,H:3 18.9 16 0.0011 19.9 0.6 10 2-13 15-24 (28)
No 1
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.56 E-value=8.1 Score=25.67 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=29.6
Q ss_pred cchhhhcccccCCCCCchhhHHHHHHHHHHHHHHhh
Q 032836 65 RNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLA 100 (132)
Q Consensus 65 ~~~v~r~a~ykfPDPIPEFAe~ETeKFr~hLl~KLs 100 (132)
+=|||.-+++-..++.-.|.+.....||.+|...|-
T Consensus 186 Gvfvl~~~~~~~~~~~~~~~q~~~~~~R~~~~~~l~ 221 (225)
T d2iy1a1 186 GMFACKYADCITKDRPINFTQQHMPYFRKRMVWEIL 221 (225)
T ss_dssp HHHHHHHHHHHHTTCCCCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 347888888888886668999999999999988764
No 2
>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.37 E-value=19 Score=27.63 Aligned_cols=58 Identities=26% Similarity=0.422 Sum_probs=37.0
Q ss_pred cccccCCCCCch--hhHHHHHHHHHHHHHHhhh---h---cccccchHHHHHHHH---------HHHHHHhhhccC
Q 032836 71 AAEYKFPDPIPE--FADSETQKFRTHLLNKLAK---K---DMFGDSLEDVVGICT---------EVMLSFTLSNFF 129 (132)
Q Consensus 71 ~a~ykfPDPIPE--FAe~ETeKFr~hLl~KLsk---k---D~FGd~leeVV~VCt---------EIfs~FLh~eYg 129 (132)
|.+||+-||||. ..+.|.+-.| .|+++|.+ + +.|=+-++.+..-|. |-.++||.+.-|
T Consensus 49 a~~~k~g~~ip~v~YT~eE~~~W~-~l~~~l~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~~vs~~L~~~TG 123 (290)
T d1mlwa_ 49 AMNYKHGDPIPKVEFTEEEIKTWG-TVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTG 123 (290)
T ss_dssp HHHCCTTSCCCCCCCCHHHHHHHH-HHHHHHHHHHHHHBCHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHTS
T ss_pred HHhCcCCCCCCCCCcCHHHHHHHH-HHHHHHHHHHhccccHHHHHHHHHHHHhcCCCcccCCCHHHHHHHHHHhcC
Confidence 349999999997 6777777665 34455442 1 555555555555553 455777777654
No 3
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=27.72 E-value=22 Score=22.62 Aligned_cols=35 Identities=14% Similarity=0.313 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHHHHHHhhh--------hcccccchHHHHHHHHHHH
Q 032836 83 FADSETQKFRTHLLNKLAK--------KDMFGDSLEDVVGICTEVM 120 (132)
Q Consensus 83 FAe~ETeKFr~hLl~KLsk--------kD~FGd~leeVV~VCtEIf 120 (132)
|.+.|++.....|+.=|.. +|+||+++.+ .|-|+.
T Consensus 29 ~~~~~~~~il~dil~lleea~~~G~~v~ev~G~D~~~---f~deli 71 (90)
T d2o4ta1 29 VELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAA---FCDALI 71 (90)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHCSCHHH---HHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCHHH---HHHHHH
Confidence 3577888888888887772 3788887654 566665
No 4
>d2a1ja1 a.60.2.5 (A:837-898) DNA repair endonuclease XPF {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=19 Score=20.62 Aligned_cols=39 Identities=15% Similarity=0.359 Sum_probs=23.0
Q ss_pred HHHHHHHHhhh-hcccc---cchHHHHH--HHHHHHHHHhhhccC
Q 032836 91 FRTHLLNKLAK-KDMFG---DSLEDVVG--ICTEVMLSFTLSNFF 129 (132)
Q Consensus 91 Fr~hLl~KLsk-kD~FG---d~leeVV~--VCtEIfs~FLh~eYg 129 (132)
=...|+++..- +++.- |+|.+|.| ..++-.-+|||++|-
T Consensus 15 ~~~~Ll~~f~Si~~l~~As~~eL~~v~G~~~~A~~i~~f~~~~~~ 59 (62)
T d2a1ja1 15 NCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDFIHTSFA 59 (62)
T ss_dssp HHHHHHHHCSSHHHHHTCCHHHHHHHHSCHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHhccHHHHHhCCHHHHHHCcCcHHHHHHHHHHHhhhhc
Confidence 34455555543 33333 45556664 456677789999873
No 5
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.36 E-value=18 Score=23.85 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=29.4
Q ss_pred cchhhhcccccCCCCCchhhHHHHHHHHHHHHHHhh
Q 032836 65 RNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLA 100 (132)
Q Consensus 65 ~~~v~r~a~ykfPDPIPEFAe~ETeKFr~hLl~KLs 100 (132)
+=|||.-+++-..++.-.|.+.+-..||.+|..-|=
T Consensus 186 Gvfvl~~~~~~~~~~~~~~tq~di~~~R~~i~~el~ 221 (226)
T d1th0a_ 186 GMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEIL 221 (226)
T ss_dssp HHHHHHHHHHHTTTCCCCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 457888888877776668999999999999987653
No 6
>d1ylia1 d.38.1.1 (A:11-152) Putative acyl-coa thioester hydrolase HI0827 {Haemophilus influenzae [TaxId: 727]}
Probab=22.35 E-value=13 Score=24.24 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=18.3
Q ss_pred cchhhhcccccCCCCCchhhHHHHHHH
Q 032836 65 RNHICRAAEYKFPDPIPEFADSETQKF 91 (132)
Q Consensus 65 ~~~v~r~a~ykfPDPIPEFAe~ETeKF 91 (132)
--||+...+-+ |-|||+..+.|-||-
T Consensus 110 ftfV~vd~~gk-p~~VP~~~~~e~e~~ 135 (142)
T d1ylia1 110 FTFVAVDNNGR-SRTIPRENNQELEKA 135 (142)
T ss_dssp EEEEEBCTTSC-BCCCCCTTCHHHHHH
T ss_pred EEEEEECCCCC-EecCCCCCCccHHHH
Confidence 34666666666 899999877776653
No 7
>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=19.55 E-value=35 Score=26.70 Aligned_cols=57 Identities=18% Similarity=0.273 Sum_probs=38.1
Q ss_pred ccccCCCCCch--hhHHHHHHHHHHHHHHhhh------hcccccchHHHHHHHH---------HHHHHHhhhccC
Q 032836 72 AEYKFPDPIPE--FADSETQKFRTHLLNKLAK------KDMFGDSLEDVVGICT---------EVMLSFTLSNFF 129 (132)
Q Consensus 72 a~ykfPDPIPE--FAe~ETeKFr~hLl~KLsk------kD~FGd~leeVV~VCt---------EIfs~FLh~eYg 129 (132)
.+||+-||||. ..+.|.+-.|. ++++|.+ -+.|=+-++.+..-|. |-.+.||.+.-|
T Consensus 50 ~~~~~g~piP~v~YT~eE~~tW~~-l~~rl~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TG 123 (336)
T d1toha_ 50 FQYKHGEPIPHVEYTAEEIATWKE-VYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKERTG 123 (336)
T ss_dssp HHCCTTSCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHTS
T ss_pred HhccCCCCCCCcCcCHHHHHHHHH-HHHHHHHHHhccccHHHHHHHHHHHHhcCCCcCCCCCHHHHHHHHHHhhC
Confidence 38999999994 56777766653 4444442 2666667776666665 567788877655
No 8
>d2a2ra1 a.45.1.1 (A:78-209) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.21 E-value=45 Score=19.30 Aligned_cols=28 Identities=21% Similarity=0.325 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhhhhccc-ccchHHHHHHH
Q 032836 88 TQKFRTHLLNKLAKKDMF-GDSLEDVVGIC 116 (132)
Q Consensus 88 TeKFr~hLl~KLskkD~F-Gd~leeVV~VC 116 (132)
+.++-..+.+.|.++++| ||.+ -++|++
T Consensus 49 ~~~~~~~~~~~l~~~~~l~Gd~~-T~AD~~ 77 (132)
T d2a2ra1 49 LKPFETLLSQNQGGKTFIVGDQI-SFADYN 77 (132)
T ss_dssp HHHHHHHHHTSGGGTSCSSTTSC-CHHHHH
T ss_pred HHHHHHHHHHhccCCCeeeecee-ehhHHH
Confidence 334444444555556776 5554 566666
No 9
>d1c5ch2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.04 E-value=11 Score=22.65 Aligned_cols=17 Identities=29% Similarity=0.753 Sum_probs=13.5
Q ss_pred cccchhhhcccccCCCCC
Q 032836 63 SFRNHICRAAEYKFPDPI 80 (132)
Q Consensus 63 s~~~~v~r~a~ykfPDPI 80 (132)
....++|.+.+| ||+.|
T Consensus 21 ~~~tl~Cl~~~f-~P~~i 37 (103)
T d1c5ch2 21 GTAALGCLVKDY-FPEPV 37 (103)
T ss_dssp TEEEEEEEEEEE-BSSCC
T ss_pred CeEEEEEEEEeE-eCCCe
Confidence 456789998888 89876
No 10
>g2bi6.2 g.3.12.1 (L:,H:1-7,H:32-41) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=18.91 E-value=16 Score=19.89 Aligned_cols=10 Identities=60% Similarity=1.464 Sum_probs=7.4
Q ss_pred ccccccccccCC
Q 032836 2 ACYCNRSLISSK 13 (132)
Q Consensus 2 ~~~~~~~~~s~~ 13 (132)
.|||. |||||
T Consensus 15 kcycd--lispn 24 (28)
T g2bi6.2 15 KCYCD--LISPN 24 (28)
T ss_dssp SCEEC--CCCSS
T ss_pred eeeee--eeccc
Confidence 47885 78886
Done!