Query 032838
Match_columns 132
No_of_seqs 192 out of 1026
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 10:22:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k7j_A Protein YCIO, protein T 99.6 7.4E-16 2.5E-20 120.3 5.7 55 78-132 1-55 (206)
2 1jcu_A Conserved protein MTH16 99.5 1.4E-15 4.7E-20 119.1 3.3 54 79-132 1-54 (208)
3 2eqa_A Hypothetical protein ST 99.5 4.9E-15 1.7E-19 125.3 5.9 55 78-132 1-55 (352)
4 1hru_A YRDC gene product; prot 99.4 6.5E-14 2.2E-18 107.6 2.9 46 87-132 3-48 (188)
5 3l7v_A Putative uncharacterize 99.1 6.8E-11 2.3E-15 98.3 4.9 39 92-132 44-83 (295)
6 3vth_A Hydrogenase maturation 98.9 9.4E-10 3.2E-14 100.5 5.9 43 90-132 201-243 (761)
7 3ttc_A HYPF, transcriptional r 98.9 1.1E-09 3.8E-14 98.9 4.3 41 92-132 112-152 (657)
8 4g9i_A Hydrogenase maturation 98.5 6.5E-08 2.2E-12 88.4 5.2 42 91-132 200-241 (772)
9 1u7i_A Hypothetical protein; s 33.8 34 0.0012 22.9 3.1 27 90-116 88-115 (136)
10 2fca_A TRNA (guanine-N(7)-)-me 28.9 36 0.0012 24.7 2.6 23 91-113 133-155 (213)
11 1u6l_A Hypothetical protein; s 28.5 35 0.0012 23.4 2.5 26 91-116 91-117 (149)
12 2phj_A 5'-nucleotidase SURE; S 27.6 68 0.0023 25.6 4.3 35 78-112 1-37 (251)
13 1tks_A 3,4-dihydroxy-2-butanon 24.6 1.1E+02 0.0037 24.0 4.8 37 92-128 6-48 (204)
14 3p04_A Uncharacterized BCR; SE 24.5 62 0.0021 22.0 3.1 30 81-112 7-36 (87)
15 1yzh_A TRNA (guanine-N(7)-)-me 24.0 39 0.0013 24.1 2.0 23 91-113 136-158 (214)
16 1g57_A DHBP synthase, 3,4-dihy 22.5 1.1E+02 0.0039 24.0 4.6 38 91-128 13-56 (217)
17 2x5n_A SPRPN10, 26S proteasome 21.9 1.4E+02 0.0049 21.8 4.9 41 85-130 115-155 (192)
18 3mio_A DHBP synthase, 3,4-dihy 20.7 1.4E+02 0.0049 23.3 4.8 21 92-112 5-25 (206)
No 1
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=99.60 E-value=7.4e-16 Score=120.26 Aligned_cols=55 Identities=29% Similarity=0.532 Sum_probs=52.0
Q ss_pred ceEEEEeCCCCCChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 78 GLMYVEADPSGADSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 78 mm~i~~i~p~np~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
|.+++++++.+++.+.++++++.|++||+|+|||||+|||+||++|++|++|||+
T Consensus 1 M~~~~~~~~~~~~~~~i~~a~~~L~~G~iva~pTdtvygL~~da~n~~Av~rl~~ 55 (206)
T 1k7j_A 1 MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICR 55 (206)
T ss_dssp CCEEEECCSSSCCHHHHHHHHHHHHTTCCEEEEETTEEEEEEETTCHHHHHHHHH
T ss_pred CCceEecCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHHH
Confidence 4478999999999999999999999999999999999999999999999999984
No 2
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=99.55 E-value=1.4e-15 Score=119.06 Aligned_cols=54 Identities=22% Similarity=0.410 Sum_probs=50.4
Q ss_pred eEEEEeCCCCCChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 79 LMYVEADPSGADSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 79 m~i~~i~p~np~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
|.++++++.+++.+.+++++++|++||+|+|||||+|||+||++|++|++|||+
T Consensus 1 ~~~~~~~~~~~~~~~i~~a~~~L~~G~vVa~pTdtvygL~~da~n~~Av~rl~~ 54 (208)
T 1jcu_A 1 MLIRKITRKNPSPDVLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFR 54 (208)
T ss_dssp CCSCCCCSSCCCCHHHHHHHHHHHTTCEEECCCSSSCEEEEETTSHHHHHHHHH
T ss_pred CeEEEecCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHHH
Confidence 456789999999899999999999999999999999999999999999999984
No 3
>2eqa_A Hypothetical protein ST1526; YRDC/RIBB fold, YRDC domain, SUA5 domain, structural genomics, NPPSFA; HET: AMP; 1.80A {Sulfolobus tokodaii} PDB: 3aje_A* 4e1b_A*
Probab=99.54 E-value=4.9e-15 Score=125.26 Aligned_cols=55 Identities=16% Similarity=0.302 Sum_probs=51.6
Q ss_pred ceEEEEeCCCCCChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 78 GLMYVEADPSGADSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 78 mm~i~~i~p~np~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
|+++++++++|++.+.+++++++|++||+|+||||||||||||++|++||+|||+
T Consensus 1 ~t~~~~i~~~~~~~~~i~~aa~~L~~G~iVa~PTeTvYGLg~da~n~~AV~rI~~ 55 (352)
T 2eqa_A 1 MTQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQ 55 (352)
T ss_dssp -CEEEECCSSSCCHHHHHHHHHHHHTTCCEEECCSSSCEEEEETTCHHHHHHHHH
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHcCCEEEEECCCEeEEEEeCCCHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999984
No 4
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=99.41 E-value=6.5e-14 Score=107.57 Aligned_cols=46 Identities=24% Similarity=0.442 Sum_probs=42.5
Q ss_pred CCCChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 87 SGADSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 87 ~np~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
++++.+.+++++++|++||||+|||||+|||+||+.|++|++|||+
T Consensus 3 ~~~~~~~i~~a~~~L~~G~iva~ptdt~ygL~~da~~~~av~rl~~ 48 (188)
T 1hru_A 3 NNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLE 48 (188)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEECSSSEEEEECTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEeCCCEeeeEEcCCCHHHHHHHHH
Confidence 4456778999999999999999999999999999999999999984
No 5
>3l7v_A Putative uncharacterized protein SMU.1377C; transcription; 2.26A {Streptococcus mutans}
Probab=99.08 E-value=6.8e-11 Score=98.31 Aligned_cols=39 Identities=31% Similarity=0.342 Sum_probs=36.7
Q ss_pred hcHHHHHHHHh-cCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 92 WKLEPVVELLK-EGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 92 ~~I~~aae~L~-~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
+.+++|+++|+ +||||+|||||+|||+| .|++||+|||+
T Consensus 44 ~~i~~Aa~~L~~~GgIVa~PTdTvYGL~c--~n~~AV~rL~~ 83 (295)
T 3l7v_A 44 NLSQEGFEIVKGEGGVIVCPTKVGYIIMT--SDKKGLERKFE 83 (295)
T ss_dssp SCCHHHHHHHHSTTCEEEEEETTEEEEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEE--cCHHHHHHHHH
Confidence 35899999999 99999999999999999 99999999984
No 6
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=98.92 E-value=9.4e-10 Score=100.54 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=40.2
Q ss_pred ChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 90 DSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 90 ~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
..+.|++++++|++||||+|||||+|||+||++|++||+|||+
T Consensus 201 ~~~~i~~aa~~L~~G~IVa~pt~t~YgL~cda~n~~AV~rL~~ 243 (761)
T 3vth_A 201 FDDEIKCVAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRR 243 (761)
T ss_dssp CSCHHHHHHHHHHTTCCEEEECSSSEEEECBTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCCEEEEECCcEEEEEecCCCHHHHHHHHH
Confidence 3457999999999999999999999999999999999999984
No 7
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=98.86 E-value=1.1e-09 Score=98.88 Aligned_cols=41 Identities=24% Similarity=0.391 Sum_probs=39.2
Q ss_pred hcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 92 WKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 92 ~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
+.|++++++|++||||+|||||+|||+||+.|++||+|||+
T Consensus 112 ~~i~~aa~~L~~G~IVa~pt~ggYgL~cda~n~~AV~rL~~ 152 (657)
T 3ttc_A 112 AALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRA 152 (657)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSSEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCceeEEEeecCCHHHHHHHHH
Confidence 57999999999999999999999999999999999999984
No 8
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=98.53 E-value=6.5e-08 Score=88.37 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=39.7
Q ss_pred hhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHHhC
Q 032838 91 SWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERLRR 132 (132)
Q Consensus 91 ~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRIy~ 132 (132)
.+.|+++++.|++|++|++||+|+|+|+||+.|++||++|++
T Consensus 200 ~~~i~~a~~~l~~G~iva~kg~ggy~L~cda~n~~aV~~lr~ 241 (772)
T 4g9i_A 200 GDPLRKAAELIDKGYIVAIKGIGGIHLACDAANEEVVAELRR 241 (772)
T ss_dssp THHHHHHHHHHTTSCCEEECCSSSBEEECCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEecCCeeEEEEecCCHHHHHHHHH
Confidence 357999999999999999999999999999999999999974
No 9
>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=33.83 E-value=34 Score=22.89 Aligned_cols=27 Identities=19% Similarity=0.338 Sum_probs=19.9
Q ss_pred ChhcHHHHHHHHhcCCeEEE-ccCccee
Q 032838 90 DSWKLEPVVELLKEGAVGVI-PTDTLYA 116 (132)
Q Consensus 90 ~~~~I~~aae~L~~GgVVi~-PTDTVYG 116 (132)
+.+.++++.+.|..||.|+. |+|+-||
T Consensus 88 d~~evd~~~~~l~~Gg~v~~p~~~~~~G 115 (136)
T 1u7i_A 88 SNAQIERLAEALSDGGKALMPLGDYGFS 115 (136)
T ss_dssp CHHHHHHHHHHHHTTSEEEEEEECCSSS
T ss_pred CHHHHHHHHHHHHcCCEEecccccCCCc
Confidence 34558888888888887665 5777776
No 10
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=28.86 E-value=36 Score=24.68 Aligned_cols=23 Identities=26% Similarity=0.229 Sum_probs=19.7
Q ss_pred hhcHHHHHHHHhcCCeEEEccCc
Q 032838 91 SWKLEPVVELLKEGAVGVIPTDT 113 (132)
Q Consensus 91 ~~~I~~aae~L~~GgVVi~PTDT 113 (132)
...++++.+.|+.||.+++-||.
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCCEEEEEeCC
Confidence 35689999999999999998864
No 11
>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=28.53 E-value=35 Score=23.41 Aligned_cols=26 Identities=23% Similarity=0.242 Sum_probs=19.7
Q ss_pred hhcHHHHHHHHhcCCeEEE-ccCccee
Q 032838 91 SWKLEPVVELLKEGAVGVI-PTDTLYA 116 (132)
Q Consensus 91 ~~~I~~aae~L~~GgVVi~-PTDTVYG 116 (132)
.+.++++.+.|..||.|+. |+|+-||
T Consensus 91 ~~evd~~~~~l~~Gg~i~~p~~~~~wG 117 (149)
T 1u6l_A 91 KAEAERLFNALAEGGSVQMPLGPTFWA 117 (149)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHCCCEEeecccccCcc
Confidence 3458888888999987765 5777776
No 12
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=27.62 E-value=68 Score=25.63 Aligned_cols=35 Identities=23% Similarity=0.150 Sum_probs=27.3
Q ss_pred ceEEEEeCCCCCChhcHHHHHHHHhcCC--eEEEccC
Q 032838 78 GLMYVEADPSGADSWKLEPVVELLKEGA--VGVIPTD 112 (132)
Q Consensus 78 mm~i~~i~p~np~~~~I~~aae~L~~Gg--VVi~PTD 112 (132)
||+|+-.+.+.....-|...+++|++-| +|+.|-.
T Consensus 1 ~M~ILlTNDDGi~apGi~aL~~~l~~~g~V~VVAP~~ 37 (251)
T 2phj_A 1 MPTFLLVNDDGYFSPGINALREALKSLGRVVVVAPDR 37 (251)
T ss_dssp -CEEEEECSSCTTCHHHHHHHHHHTTTSEEEEEEESS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 6888888888888888999999998776 4556644
No 13
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=24.57 E-value=1.1e+02 Score=24.03 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=26.7
Q ss_pred hcHHHHHHHHhcCCeEEEccC------cceeecccCCCHHHHH
Q 032838 92 WKLEPVVELLKEGAVGVIPTD------TLYAIVCDLKSHSAIE 128 (132)
Q Consensus 92 ~~I~~aae~L~~GgVVi~PTD------TVYGLgcda~n~~AVe 128 (132)
..+++|++.|++|++|++=.| .-.-+.+..-.++.|.
T Consensus 6 ~~ie~Ai~~lr~G~~Viv~DdedREnEgDli~aAe~~T~e~i~ 48 (204)
T 1tks_A 6 TPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMA 48 (204)
T ss_dssp CCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHH
T ss_pred hhHHHHHHHHHCCCeEEEEeCCCCCCCEEEEEEhhhCCHHHHH
Confidence 469999999999999998765 4444555555555554
No 14
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=24.53 E-value=62 Score=22.04 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=22.2
Q ss_pred EEEeCCCCCChhcHHHHHHHHhcCCeEEEccC
Q 032838 81 YVEADPSGADSWKLEPVVELLKEGAVGVIPTD 112 (132)
Q Consensus 81 i~~i~p~np~~~~I~~aae~L~~GgVVi~PTD 112 (132)
+.-+.|.. .+..+++++.|++|..|++=.+
T Consensus 7 Ivv~~P~s--y~Da~~I~d~Lr~~~~VvvNL~ 36 (87)
T 3p04_A 7 IVPVELHS--FEDAQVIGGAFRDGDAVVFDMS 36 (87)
T ss_dssp CEEEECSS--GGGHHHHHHHHHTTCCEEEECT
T ss_pred EEEEecCc--HHHHHHHHHHHHCCCEEEEECC
Confidence 44555553 4568999999999999997543
No 15
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=24.00 E-value=39 Score=24.06 Aligned_cols=23 Identities=22% Similarity=0.137 Sum_probs=19.7
Q ss_pred hhcHHHHHHHHhcCCeEEEccCc
Q 032838 91 SWKLEPVVELLKEGAVGVIPTDT 113 (132)
Q Consensus 91 ~~~I~~aae~L~~GgVVi~PTDT 113 (132)
...++++.+.|+.||++++-||.
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESC
T ss_pred HHHHHHHHHHcCCCcEEEEEeCC
Confidence 35788999999999999998864
No 16
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=22.50 E-value=1.1e+02 Score=24.02 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=26.6
Q ss_pred hhcHHHHHHHHhcCCeEEEccC------cceeecccCCCHHHHH
Q 032838 91 SWKLEPVVELLKEGAVGVIPTD------TLYAIVCDLKSHSAIE 128 (132)
Q Consensus 91 ~~~I~~aae~L~~GgVVi~PTD------TVYGLgcda~n~~AVe 128 (132)
...+++|++.|++|.+|++=.| .-.-+.+....++.+.
T Consensus 13 ~~~ie~Ai~~lr~G~~Viv~DdedREnEgdli~aAe~~T~e~i~ 56 (217)
T 1g57_A 13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMA 56 (217)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCCCcCEEEEEEhhhCCHHHHH
Confidence 4569999999999999888665 3445555555555554
No 17
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=21.86 E-value=1.4e+02 Score=21.82 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=26.7
Q ss_pred CCCCCChhcHHHHHHHHhcCCeEEEccCcceeecccCCCHHHHHHH
Q 032838 85 DPSGADSWKLEPVVELLKEGAVGVIPTDTLYAIVCDLKSHSAIERL 130 (132)
Q Consensus 85 ~p~np~~~~I~~aae~L~~GgVVi~PTDTVYGLgcda~n~~AVeRI 130 (132)
++.+.+...+.++++.+++.|+-++ +.|+|....|.+ ++.+
T Consensus 115 ~~~~~~~~~~~~~a~~lk~~gi~v~----~Ig~G~~~~~~~-l~~l 155 (192)
T 2x5n_A 115 SPIVEDEKNLIRLAKRMKKNNVAID----IIHIGELQNESA-LQHF 155 (192)
T ss_dssp SCCSSCHHHHHHHHHHHHHTTEEEE----EEEESCC---CH-HHHH
T ss_pred CCCCCCchhHHHHHHHHHHCCCEEE----EEEeCCCCccHH-HHHH
Confidence 3333345678888999999998776 567777765655 6654
No 18
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=20.70 E-value=1.4e+02 Score=23.32 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=18.0
Q ss_pred hcHHHHHHHHhcCCeEEEccC
Q 032838 92 WKLEPVVELLKEGAVGVIPTD 112 (132)
Q Consensus 92 ~~I~~aae~L~~GgVVi~PTD 112 (132)
..|++|++.|++|++|++=.|
T Consensus 5 ~~ie~Ai~~lr~G~~Viv~Dd 25 (206)
T 3mio_A 5 DSVERAVADIAAGKAVIVIDD 25 (206)
T ss_dssp CCHHHHHHHHHTTCCEEEESS
T ss_pred hhHHHHHHHHHCCCeEEEEeC
Confidence 359999999999999988664
Done!