BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032840
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SL43|MSRA5_ARATH Peptide methionine sulfoxide reductase A5 OS=Arabidopsis thaliana
GN=MSRA5 PE=2 SV=1
Length = 254
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 105/126 (83%), Gaps = 3/126 (2%)
Query: 7 YLFFSVLHLLLLTDTALCIRFPDRVSTSINDELGRPLKAAVFALGSFWRSEAVFGCLNGV 66
+ FF + LL D + IR +++S ++ D RPLK+AVFALGSFWRSEA FGC+NGV
Sbjct: 19 FFFFLCVSLL---DKTVSIRISNQISDTVVDSPDRPLKSAVFALGSFWRSEAAFGCINGV 75
Query: 67 VRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPD 126
VRT+ GYAGG+KTNPE+RNLGDHAESVQVEYDPR+I +RQLL+VFW+SHD RQVFGQGPD
Sbjct: 76 VRTSAGYAGGTKTNPEYRNLGDHAESVQVEYDPRIIGYRQLLDVFWSSHDSRQVFGQGPD 135
Query: 127 VGNQYR 132
VGNQYR
Sbjct: 136 VGNQYR 141
>sp|Q5VPG8|MSRA5_ORYSJ Peptide methionine sulfoxide reductase A5 OS=Oryza sativa subsp.
japonica GN=MSRA5 PE=2 SV=1
Length = 254
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 77/85 (90%)
Query: 48 FALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQL 107
FALGSFWRSEA FGCL GV+RT+VGYAGGSK PE+RNLGDHAE V+VEYDPR+I +++L
Sbjct: 57 FALGSFWRSEAAFGCLPGVIRTSVGYAGGSKARPEYRNLGDHAECVKVEYDPRLIQYKKL 116
Query: 108 LEVFWTSHDCRQVFGQGPDVGNQYR 132
LEVFW SHD R+VFGQGPDVGNQYR
Sbjct: 117 LEVFWASHDPREVFGQGPDVGNQYR 141
>sp|P08761|MSRA_DROME Peptide methionine sulfoxide reductase OS=Drosophila melanogaster
GN=Eip71CD PE=2 SV=2
Length = 246
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 46 AVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFR 105
A F +G FW +E+++G GV+RTTVGYAGGS P +R +GDH E ++++YDP VI+F+
Sbjct: 42 ATFGMGCFWGAESLYGATRGVLRTTVGYAGGSSDLPTYRKMGDHTEVLEIDYDPTVISFK 101
Query: 106 QLLEVFWTSHDCRQVFGQGPDVGNQY 131
+LL++FW +H+ +G + QY
Sbjct: 102 ELLDLFWNNHE----YGLTTPIKRQY 123
>sp|A7MM56|MSRA_CROS8 Peptide methionine sulfoxide reductase MsrA OS=Cronobacter
sakazakii (strain ATCC BAA-894) GN=msrA PE=3 SV=1
Length = 212
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V+V YD
Sbjct: 43 MEVALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG DVG QYR
Sbjct: 103 PNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYR 136
>sp|B2TZL3|MSRA_SHIB3 Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=msrA PE=3
SV=1
Length = 212
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E++F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVESLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7UQN3|MSRA_ECO27 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B5Z3H5|MSRA_ECO5E Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q8XCG3|MSRA_ECO57 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O157:H7 GN=msrA PE=3 SV=3
Length = 212
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L+GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B6I2D2|MSRA_ECOSE Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SE11) GN=msrA PE=3 SV=1
Length = 212
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDQGTQYR 136
>sp|Q31TF9|MSRA_SHIBS Peptide methionine sulfoxide reductase MsrA OS=Shigella boydii
serotype 4 (strain Sb227) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7NGF6|MSRA_ECOLU Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7MTA1|MSRA_ECO81 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O81
(strain ED1a) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7NUD2|MSRA_ECO7I Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q3YUC8|MSRA_SHISS Peptide methionine sulfoxide reductase MsrA OS=Shigella sonnei
(strain Ss046) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|P0A745|MSRA_SHIFL Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
GN=msrA PE=3 SV=2
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q0SXG5|MSRA_SHIF8 Peptide methionine sulfoxide reductase MsrA OS=Shigella flexneri
serotype 5b (strain 8401) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|P0A744|MSRA_ECOLI Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12) GN=msrA PE=1 SV=2
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B1ISY2|MSRA_ECOLC Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|A8A7X5|MSRA_ECOHS Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O9:H4 (strain HS) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B1XDW8|MSRA_ECODH Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / DH10B) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|C4ZR95|MSRA_ECOBW Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7M9I1|MSRA_ECO8A Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli O8
(strain IAI1) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7LCT1|MSRA_ECO55 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain 55989 / EAEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|B7MLN1|MSRA_ECO45 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|A7ZV98|MSRA_ECO24 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=msrA PE=3 SV=1
Length = 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q8TQV6|MSRA_METAC Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=msrA PE=3 SV=1
Length = 188
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 32 STSINDELGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----G 87
ST I + G L+ A FA G FW E F + GVV T VGY+GG P + +
Sbjct: 17 STDIFENPGEGLEKATFAAGCFWGIEEAFRQVKGVVATAVGYSGGHFEKPTYEQVCTLDT 76
Query: 88 DHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
HAE+V+V +DP+V++++ LL+VFW HD QGPDVG QYR
Sbjct: 77 GHAEAVRVIFDPKVVSYKNLLDVFWKIHDPTTKNRQGPDVGKQYR 121
>sp|B1LRA3|MSRA_ECOSM Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=msrA PE=3 SV=1
Length = 212
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|A8M3K6|MSRA_SALAI Peptide methionine sulfoxide reductase MsrA OS=Salinispora
arenicola (strain CNS-205) GN=msrA PE=3 SV=1
Length = 220
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 39 LGRPL--------KAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL---- 86
LG PL + AVF +G FW +E +F L GV+ T+VGYAGG NP + +
Sbjct: 33 LGTPLAGPFPEGTQVAVFGMGCFWGAERLFWTLPGVLTTSVGYAGGYTPNPSYEEVCSGR 92
Query: 87 GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
HAE VQV YDP I + LL+VFW +HD Q QG DVG QYR
Sbjct: 93 TGHAEVVQVRYDPTKIAYEDLLKVFWENHDPTQGMRQGNDVGTQYR 138
>sp|Q8YXZ4|MSRA1_NOSS1 Peptide methionine sulfoxide reductase MsrA 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=msrA1 PE=3 SV=1
Length = 163
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRN----LGDHAESVQVEY 97
P++ A F G FW EA F + GVV T+VGY GG NP + + + HAE VQ+EY
Sbjct: 11 PMEKATFGAGCFWGVEAAFRKVKGVVSTSVGYMGGHFPNPCYLDVLSRITGHAEVVQIEY 70
Query: 98 DPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
DP+++++ LL VFW HD + QGPD G QYR
Sbjct: 71 DPQLVSYEDLLAVFWDIHDPTTLNRQGPDKGEQYR 105
>sp|A4X3E5|MSRA_SALTO Peptide methionine sulfoxide reductase MsrA OS=Salinispora tropica
(strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=msrA PE=3
SV=1
Length = 220
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 16 LLLTDTALCIRFPDRVSTSINDELGRPLKA--------AVFALGSFWRSEAVFGCLNGVV 67
L+ + AL R T ++ LG PL AVF +G FW +E +F L GV+
Sbjct: 10 LISPEEALPGRPVATPVTEPHEVLGTPLTGPFPEGTAVAVFGMGCFWGAERLFWTLPGVL 69
Query: 68 RTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQ 123
T+VGYAGG NP + + HAE V V YDP I + LL+VFW +HD Q Q
Sbjct: 70 TTSVGYAGGYTPNPSYDEVCSGRTGHAEVVHVRYDPTKITYEDLLKVFWENHDPTQGMRQ 129
Query: 124 GPDVGNQYR 132
G DVG QYR
Sbjct: 130 GNDVGTQYR 138
>sp|B5Y2Y3|MSRA_KLEP3 Peptide methionine sulfoxide reductase MsrA OS=Klebsiella
pneumoniae (strain 342) GN=msrA PE=3 SV=1
Length = 211
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V+V YD
Sbjct: 43 MEVALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGQTGHAEAVRVVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P+VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|A9N540|MSRA_SALPB Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1
Length = 212
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL++FW +HD Q QG D G QYR
Sbjct: 103 PAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYR 136
>sp|A9MEZ2|MSRA_SALAR Peptide methionine sulfoxide reductase MsrA OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=msrA PE=3
SV=1
Length = 212
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V+V YDP VI++ QLL+VFW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRVVYDPAVISYEQLLQVFWENHDPA 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMRQGNDHGTQYR 136
>sp|B7LMP0|MSRA_ESCF3 Peptide methionine sulfoxide reductase MsrA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=msrA PE=3 SV=1
Length = 212
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGETGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q18J40|MSRA_HALWD Peptide methionine sulfoxide reductase MsrA OS=Haloquadratum
walsbyi (strain DSM 16790) GN=msrA PE=3 SV=1
Length = 174
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 44 KAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDP 99
+ A G FW +EA L GV T GYAGG NP ++ + DHAE VQ+EYDP
Sbjct: 3 ETATVGGGCFWCTEAAMKELAGVNTVTSGYAGGDIDNPTYKQVCSGTTDHAEVVQIEYDP 62
Query: 100 RVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
I + +LLEVF+ +HD Q+ QGPDVG QYR
Sbjct: 63 TKIEYSELLEVFFATHDPTQLNRQGPDVGTQYR 95
>sp|B4TT49|MSRA_SALSV Peptide methionine sulfoxide reductase MsrA OS=Salmonella
schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1
Length = 212
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI + QLL++FW +HD Q QG D G QYR
Sbjct: 103 PAVIRYEQLLQIFWENHDPTQGMQQGNDHGTQYR 136
>sp|Q0T9G6|MSRA_ECOL5 Peptide methionine sulfoxide reductase MsrA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=msrA PE=3 SV=1
Length = 212
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L GV T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+VFW +HD Q QG D QYR
Sbjct: 103 PSVISYEQLLQVFWENHDPAQGMRQGNDHSTQYR 136
>sp|A8G8X6|MSRA_SERP5 Peptide methionine sulfoxide reductase MsrA OS=Serratia
proteamaculans (strain 568) GN=msrA PE=3 SV=1
Length = 213
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYD 98
L+ A+FA+G FW E +F GV T GY+GG NP +R + H E V+V +D
Sbjct: 44 LEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFD 103
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P++I+++QLL+VFW +HD Q QG DVG QYR
Sbjct: 104 PKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYR 137
>sp|Q8ZK71|MSRA_SALTY Peptide methionine sulfoxide reductase MsrA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=msrA PE=3 SV=1
Length = 212
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+ FW +HD Q QG D G QYR
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYR 136
>sp|B4T3H1|MSRA_SALNS Peptide methionine sulfoxide reductase MsrA OS=Salmonella newport
(strain SL254) GN=msrA PE=3 SV=1
Length = 212
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYD 98
++ A FA+G FW E +F L GV T GYAGG NP +R + HAE+V++ YD
Sbjct: 43 MEIAYFAMGCFWGVERLFWQLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL+ FW +HD Q QG D G QYR
Sbjct: 103 PAVISYEQLLQTFWENHDPTQGMQQGNDHGTQYR 136
>sp|Q328B8|MSRA_SHIDS Peptide methionine sulfoxide reductase MsrA OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=msrA PE=3 SV=1
Length = 212
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GD--HAESVQVEYD 98
++ A+FA+G FW E +F L V T GY GG NP +R + GD HAE+V++ YD
Sbjct: 43 MEIAIFAMGCFWGVERLFWQLPSVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD 102
Query: 99 PRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
P VI++ QLL++FW +HD Q QG D G QYR
Sbjct: 103 PSVISYEQLLQIFWENHDPAQGMRQGNDHGTQYR 136
>sp|Q8PUD6|MSRA_METMA Peptide methionine sulfoxide reductase MsrA OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=msrA PE=3 SV=1
Length = 211
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 33 TSINDELGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GD 88
T I + G L+ A FA G FW E F + GVV T VGY+GG P + +
Sbjct: 41 TEIFENPGEGLEKATFAAGCFWGIEEAFRQIKGVVATAVGYSGGHFKRPTYEQVCTLDTG 100
Query: 89 HAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFGQGPDVGNQYR 132
HAE+V+V +DP +++++ LL+VFW HD QGPDVG QYR
Sbjct: 101 HAEAVRVIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYR 144
>sp|B5F3D4|MSRA_SALA4 Peptide methionine sulfoxide reductase MsrA OS=Salmonella agona
(strain SL483) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|Q8Z150|MSRA_SALTI Peptide methionine sulfoxide reductase MsrA OS=Salmonella typhi
GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|B5BKM8|MSRA_SALPK Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain AKU_12601) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|C0Q6H8|MSRA_SALPC Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
C (strain RKS4594) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|Q5PJ81|MSRA_SALPA Peptide methionine sulfoxide reductase MsrA OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|B4TFF2|MSRA_SALHS Peptide methionine sulfoxide reductase MsrA OS=Salmonella
heidelberg (strain SL476) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|B5R9G7|MSRA_SALG2 Peptide methionine sulfoxide reductase MsrA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=msrA PE=3
SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
>sp|B5R0T7|MSRA_SALEP Peptide methionine sulfoxide reductase MsrA OS=Salmonella
enteritidis PT4 (strain P125109) GN=msrA PE=3 SV=1
Length = 212
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 9 FFSVLHLLLLTDTALCIRFPDRVST--SINDE----LGRPLKAAVFALGSFWRSEAVFGC 62
F HL+ D P ++T ++N+ + ++ A FA+G FW E +F
Sbjct: 3 LFDKKHLVTQADALPGRNTPMPIATLHAVNEHSMTNVPAGMEIAYFAMGCFWGVERLFWQ 62
Query: 63 LNGVVRTTVGYAGGSKTNPEFRNLGD----HAESVQVEYDPRVINFRQLLEVFWTSHDCR 118
L GV T GYAGG NP +R + HAE+V++ YDP VI + QLL+ FW +HD
Sbjct: 63 LPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVIRYEQLLQTFWENHDPT 122
Query: 119 QVFGQGPDVGNQYR 132
Q QG D G QYR
Sbjct: 123 QGMQQGNDHGTQYR 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,983,006
Number of Sequences: 539616
Number of extensions: 1717377
Number of successful extensions: 4203
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3570
Number of HSP's gapped (non-prelim): 332
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)