Query 032840
Match_columns 132
No_of_seqs 119 out of 1029
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 10:24:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwb_A Peptide methionine sulf 100.0 3.5E-48 1.2E-52 299.9 8.4 90 43-132 2-91 (168)
2 1fvg_A Peptide methionine sulf 100.0 8.9E-47 3.1E-51 298.6 8.2 93 40-132 40-136 (199)
3 3bqh_A PILB, peptide methionin 100.0 1.2E-46 4.2E-51 296.6 8.5 90 43-132 2-95 (193)
4 1ff3_A Peptide methionine sulf 100.0 2E-46 6.8E-51 298.8 7.5 93 40-132 39-135 (211)
5 2j89_A Methionine sulfoxide re 100.0 1E-45 3.5E-50 301.8 8.1 94 39-132 90-187 (261)
6 3pim_A Peptide methionine sulf 100.0 1.3E-45 4.6E-50 289.5 7.1 93 40-132 16-120 (187)
7 1nwa_A Peptide methionine sulf 100.0 3.3E-45 1.1E-49 290.3 8.9 90 42-132 24-114 (203)
8 3e0m_A Peptide methionine sulf 100.0 9.9E-44 3.4E-48 296.5 7.9 91 42-132 1-93 (313)
9 3dxs_X Copper-transporting ATP 96.7 0.0021 7.2E-08 39.7 4.1 47 50-111 14-60 (74)
10 1cpz_A Protein (COPZ); copper 96.3 0.0084 2.9E-07 35.2 5.2 47 50-111 12-58 (68)
11 1osd_A MERP, hypothetical prot 96.2 0.0096 3.3E-07 35.5 5.2 47 50-111 15-61 (72)
12 1p6t_A Potential copper-transp 96.2 0.0068 2.3E-07 41.9 4.7 49 50-113 86-134 (151)
13 2l3m_A Copper-ION-binding prot 96.0 0.0093 3.2E-07 35.6 4.4 47 50-111 17-63 (71)
14 2ldi_A Zinc-transporting ATPas 96.0 0.017 5.7E-07 33.8 5.2 47 50-111 15-61 (71)
15 1opz_A Potential copper-transp 95.9 0.018 6.2E-07 34.4 5.1 48 49-111 17-64 (76)
16 1yjr_A Copper-transporting ATP 95.8 0.016 5.5E-07 34.7 4.6 47 50-111 16-62 (75)
17 1q8l_A Copper-transporting ATP 95.8 0.026 8.9E-07 35.6 5.8 48 50-112 21-68 (84)
18 2qif_A Copper chaperone COPZ; 95.7 0.016 5.5E-07 33.5 4.4 47 50-111 14-60 (69)
19 2g9o_A Copper-transporting ATP 95.7 0.0094 3.2E-07 38.8 3.6 47 50-111 15-61 (90)
20 3cjk_B Copper-transporting ATP 95.6 0.018 6.2E-07 34.8 4.5 47 50-111 14-60 (75)
21 1kvi_A Copper-transporting ATP 95.6 0.017 5.7E-07 35.5 4.2 47 50-111 20-66 (79)
22 2ofg_X Zinc-transporting ATPas 95.6 0.022 7.7E-07 38.6 5.2 48 50-112 20-67 (111)
23 1y3j_A Copper-transporting ATP 95.5 0.016 5.5E-07 35.5 3.8 47 50-111 15-61 (77)
24 2ew9_A Copper-transporting ATP 95.4 0.01 3.5E-07 40.7 3.0 47 50-111 92-138 (149)
25 1aw0_A Menkes copper-transport 95.3 0.012 4.1E-07 35.0 2.8 47 50-111 15-61 (72)
26 4a4j_A Pacszia, cation-transpo 95.2 0.027 9.2E-07 34.0 4.1 47 50-112 14-60 (69)
27 2xmw_A PACS-N, cation-transpor 95.1 0.028 9.5E-07 33.2 4.0 46 50-111 15-60 (71)
28 1yg0_A COP associated protein; 95.0 0.046 1.6E-06 31.7 4.6 46 50-111 13-58 (66)
29 2kt2_A Mercuric reductase; nme 94.9 0.04 1.4E-06 32.6 4.3 46 50-111 12-57 (69)
30 1jww_A Potential copper-transp 94.3 0.043 1.5E-06 33.3 3.4 47 50-111 15-61 (80)
31 2kkh_A Putative heavy metal tr 93.8 0.13 4.5E-06 33.1 5.3 47 50-111 28-74 (95)
32 2rop_A Copper-transporting ATP 93.8 0.081 2.8E-06 38.9 4.7 47 50-111 134-180 (202)
33 1fvq_A Copper-transporting ATP 93.2 0.11 3.8E-06 30.6 3.8 46 50-111 14-59 (72)
34 1mwy_A ZNTA; open-faced beta-s 93.1 0.18 6.3E-06 30.2 4.9 44 50-110 15-58 (73)
35 2rop_A Copper-transporting ATP 92.6 0.2 6.9E-06 36.7 5.3 47 50-111 32-78 (202)
36 2ew9_A Copper-transporting ATP 91.0 0.24 8.2E-06 33.6 3.9 47 50-111 16-62 (149)
37 3j09_A COPA, copper-exporting 90.3 0.22 7.5E-06 44.5 4.0 49 50-113 14-62 (723)
38 3fry_A Probable copper-exporti 88.2 0.5 1.7E-05 28.9 3.5 43 49-111 16-58 (73)
39 1cc8_A Protein (metallochapero 86.1 0.85 2.9E-05 27.6 3.7 45 49-111 15-60 (73)
40 3iwl_A Copper transport protei 85.7 0.63 2.2E-05 28.1 2.9 43 51-112 14-56 (68)
41 2kwa_A Kinase A inhibitor; bac 85.5 0.35 1.2E-05 32.9 1.8 32 63-111 45-86 (101)
42 1p6t_A Potential copper-transp 82.6 1.9 6.5E-05 29.2 4.6 46 50-110 18-63 (151)
43 2phc_B Uncharacterized protein 80.1 2.6 9E-05 33.0 5.1 32 63-111 39-70 (225)
44 2crl_A Copper chaperone for su 78.2 2.3 8E-05 27.9 3.7 47 49-113 29-75 (98)
45 2aj0_A Probable cadmium-transp 76.3 2.3 8E-05 25.0 3.0 35 50-99 15-49 (71)
46 2kyz_A Heavy metal binding pro 75.8 0.84 2.9E-05 26.8 0.8 42 50-111 13-54 (67)
47 2k2p_A Uncharacterized protein 74.6 1.3 4.6E-05 28.3 1.6 44 50-111 34-77 (85)
48 2roe_A Heavy metal binding pro 71.9 2.1 7.3E-05 24.8 2.0 44 50-111 12-55 (66)
49 3oep_A Putative uncharacterize 70.1 5.8 0.0002 34.6 5.1 34 63-113 33-66 (494)
50 1ans_A Neurotoxin III; NMR {An 69.3 1.2 4.1E-05 24.4 0.4 7 50-56 9-15 (27)
51 3va7_A KLLA0E08119P; carboxyla 67.3 6.3 0.00022 37.8 5.1 34 63-113 877-910 (1236)
52 2xmm_A SSR2857 protein, ATX1; 55.8 1.5 5E-05 24.8 -1.0 27 50-76 13-39 (64)
53 1qup_A Superoxide dismutase 1 54.2 19 0.00066 27.5 5.0 46 49-112 16-61 (222)
54 3mml_B Allophanate hydrolase s 49.9 14 0.00047 29.1 3.5 32 62-111 53-84 (228)
55 1jk9_B CCS, copper chaperone f 39.2 36 0.0012 26.5 4.4 28 49-76 17-44 (249)
56 1xd7_A YWNA; structural genomi 38.4 8.3 0.00028 27.2 0.5 40 55-111 39-80 (145)
57 1ylf_A RRF2 family protein; st 33.0 18 0.00061 25.5 1.6 39 56-111 47-87 (149)
58 1ybx_A Conserved hypothetical 31.9 26 0.00088 25.8 2.3 32 69-103 68-99 (143)
59 2f40_A Hypothetical protein PF 31.4 27 0.00091 24.3 2.2 22 88-109 43-64 (96)
60 1vsr_A Protein (VSR endonuclea 30.5 21 0.00072 25.8 1.6 20 37-56 31-50 (136)
61 1cw0_A Protein (DNA mismatch e 28.7 24 0.00082 26.2 1.7 20 37-56 50-69 (155)
62 4ggj_A Mitochondrial cardiolip 22.2 10 0.00035 28.0 -1.5 51 67-119 130-181 (196)
63 2bps_A YUKD protein; ubiquitin 21.0 89 0.003 20.6 3.2 24 99-122 24-47 (81)
64 3lwf_A LIN1550 protein, putati 21.0 54 0.0018 23.7 2.3 41 56-112 61-103 (159)
No 1
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-48 Score=299.87 Aligned_cols=90 Identities=42% Similarity=0.783 Sum_probs=89.0
Q ss_pred ccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHhcCCCCCCCC
Q 032840 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQVFG 122 (132)
Q Consensus 43 ~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~~hdPt~~~~ 122 (132)
.++|+||||||||+|+.|+++|||++|+|||+||..+||||++||+|+|+|+|+|||++|||++||++||++||||+.||
T Consensus 2 te~A~fagGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~hDPT~~nr 81 (168)
T 4gwb_A 2 TKRAVLAGGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQIHDPTTKDR 81 (168)
T ss_dssp CEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTSTTE
T ss_pred ceEEEEEccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhhcCCcCcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC
Q 032840 123 QGPDVGNQYR 132 (132)
Q Consensus 123 Qg~D~G~qYR 132 (132)
||+|+|+|||
T Consensus 82 Qg~D~G~QYR 91 (168)
T 4gwb_A 82 QGNDIGTSYR 91 (168)
T ss_dssp ETTEESGGGC
T ss_pred CCCCCCcCce
Confidence 9999999999
No 2
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=100.00 E-value=8.9e-47 Score=298.56 Aligned_cols=93 Identities=45% Similarity=0.819 Sum_probs=90.6
Q ss_pred CCCccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccC----CceeEEEEEecCCCCCHHHHHHHHHhcC
Q 032840 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (132)
Q Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~----gh~E~V~V~yDp~~is~~~Ll~~f~~~h 115 (132)
...+++|+||||||||+|+.|.++|||++|+|||+||..+||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 119 (199)
T 1fvg_A 40 PEGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENH 119 (199)
T ss_dssp CTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHTS
T ss_pred CCCceEEEEecCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999999999999994 9999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC
Q 032840 116 DCRQVFGQGPDVGNQYR 132 (132)
Q Consensus 116 dPt~~~~Qg~D~G~qYR 132 (132)
|||+.||||+|+|+|||
T Consensus 120 DPT~~nrQG~D~G~QYR 136 (199)
T 1fvg_A 120 DPTQGMRQGNDHGSQYR 136 (199)
T ss_dssp CTTCSSEETTEESGGGC
T ss_pred CCcccCCCCCCCChhhe
Confidence 99999999999999999
No 3
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=100.00 E-value=1.2e-46 Score=296.58 Aligned_cols=90 Identities=37% Similarity=0.684 Sum_probs=88.3
Q ss_pred ccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCcccc----CCceeEEEEEecCCCCCHHHHHHHHHhcCCCC
Q 032840 43 LKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL----GDHAESVQVEYDPRVINFRQLLEVFWTSHDCR 118 (132)
Q Consensus 43 ~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v----~gh~E~V~V~yDp~~is~~~Ll~~f~~~hdPt 118 (132)
+++|+||||||||+|+.|.++|||++|+|||+||..+||||++| +||+|+|+|+|||++|||++||++||++||||
T Consensus 2 ~~~a~fagGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT 81 (193)
T 3bqh_A 2 TRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDPT 81 (193)
T ss_dssp EEEEEEEESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHHSCCB
T ss_pred ccEEEEecCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999 49999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCC
Q 032840 119 QVFGQGPDVGNQYR 132 (132)
Q Consensus 119 ~~~~Qg~D~G~qYR 132 (132)
+.||||+|+|+|||
T Consensus 82 ~~nrQG~D~G~QYR 95 (193)
T 3bqh_A 82 SLNKQGNDTGTQYR 95 (193)
T ss_dssp GGGSSSCCTTCTTC
T ss_pred CCCCCCCCcCccce
Confidence 99999999999999
No 4
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=100.00 E-value=2e-46 Score=298.75 Aligned_cols=93 Identities=47% Similarity=0.873 Sum_probs=90.6
Q ss_pred CCCccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccC----CceeEEEEEecCCCCCHHHHHHHHHhcC
Q 032840 40 GRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTSH 115 (132)
Q Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~----gh~E~V~V~yDp~~is~~~Ll~~f~~~h 115 (132)
..++++|+||||||||+|+.|.++|||++|+|||+||..+||||++|| ||+|+|+|+|||++|||++||++||++|
T Consensus 39 ~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~~h 118 (211)
T 1ff3_A 39 PDGMEIAIFAMGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENH 118 (211)
T ss_dssp CTTCEEEEEECSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHSS
T ss_pred CCCceEEEEecCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHHhc
Confidence 467899999999999999999999999999999999999999999995 9999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCC
Q 032840 116 DCRQVFGQGPDVGNQYR 132 (132)
Q Consensus 116 dPt~~~~Qg~D~G~qYR 132 (132)
|||+.||||+|+|+|||
T Consensus 119 DPT~~nrQG~D~GtQYR 135 (211)
T 1ff3_A 119 DPAQGMRQGNDHGTQYR 135 (211)
T ss_dssp CTTSSSEETTEESGGGC
T ss_pred CCcccCCCCCCcCccce
Confidence 99999999999999999
No 5
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=100.00 E-value=1e-45 Score=301.79 Aligned_cols=94 Identities=39% Similarity=0.739 Sum_probs=91.1
Q ss_pred CCCCccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccC----CceeEEEEEecCCCCCHHHHHHHHHhc
Q 032840 39 LGRPLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLG----DHAESVQVEYDPRVINFRQLLEVFWTS 114 (132)
Q Consensus 39 ~~~~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~----gh~E~V~V~yDp~~is~~~Ll~~f~~~ 114 (132)
|..++++|+||||||||+|+.|+++|||++|+|||+||..+||||++|| ||+|+|+|+|||++|||++||++||++
T Consensus 90 p~~~~e~a~fAgGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 90 PAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp CSTTCEEEEEEESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 3367899999999999999999999999999999999999999999996 999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 032840 115 HDCRQVFGQGPDVGNQYR 132 (132)
Q Consensus 115 hdPt~~~~Qg~D~G~qYR 132 (132)
||||+.||||+|+|+|||
T Consensus 170 hDPT~~nrQG~D~GtQYR 187 (261)
T 2j89_A 170 HDPTTLNRQGNDVGTQYR 187 (261)
T ss_dssp SCTTSTTEETTEESGGGC
T ss_pred cCCcccCCCCCCCCcccc
Confidence 999999999999999999
No 6
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=100.00 E-value=1.3e-45 Score=289.52 Aligned_cols=93 Identities=39% Similarity=0.695 Sum_probs=80.4
Q ss_pred CCCccEEEEcCCCcchhhhhhccC--CCeEEEEeeecCC--CCCC----CCccccC----CceeEEEEEecCCCCCHHHH
Q 032840 40 GRPLKAAVFALGSFWRSEAVFGCL--NGVVRTTVGYAGG--SKTN----PEFRNLG----DHAESVQVEYDPRVINFRQL 107 (132)
Q Consensus 40 ~~~~~~a~fagGCFWg~E~~F~~l--~GV~~t~vGYagG--~~~~----PtY~~v~----gh~E~V~V~yDp~~is~~~L 107 (132)
+..+++|+||||||||+|+.|+++ |||++|++||+|| ..+| |||++|| ||+|+|+|+|||++|||++|
T Consensus 16 p~~~~~a~fagGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~L 95 (187)
T 3pim_A 16 PAKDKLITLACGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLREL 95 (187)
T ss_dssp TTTCEEEEEESSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHH
T ss_pred CCCCcEEEEecCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHH
Confidence 456899999999999999999999 9999999999999 8999 9999995 89999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCCC
Q 032840 108 LEVFWTSHDCRQVFGQGPDVGNQYR 132 (132)
Q Consensus 108 l~~f~~~hdPt~~~~Qg~D~G~qYR 132 (132)
|++||++||||+.||||+|+|+|||
T Consensus 96 L~~Ff~~hDPT~~nrQG~D~G~QYR 120 (187)
T 3pim_A 96 TDFFFRIHDPTTSNSQGPDKGTQYR 120 (187)
T ss_dssp HHHHTTSSCCBTTCC-----CGGGC
T ss_pred HHHHHHhcCCCcCCCCCCCcCcccc
Confidence 9999999999999999999999999
No 7
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=100.00 E-value=3.3e-45 Score=290.34 Aligned_cols=90 Identities=41% Similarity=0.714 Sum_probs=87.6
Q ss_pred CccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCC-ceeEEEEEecCCCCCHHHHHHHHHhcCCCCCC
Q 032840 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGD-HAESVQVEYDPRVINFRQLLEVFWTSHDCRQV 120 (132)
Q Consensus 42 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~g-h~E~V~V~yDp~~is~~~Ll~~f~~~hdPt~~ 120 (132)
.+++|+||||||||+|+.|.++|||++|+|||+||.++||||++ .| |+|+|+|+|||++|||++||++||++||||+.
T Consensus 24 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~-~G~HaEaV~V~yDp~~iSy~~LL~~Ff~~hDPT~~ 102 (203)
T 1nwa_A 24 SNQKAILAGGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRN-HGTHAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTK 102 (203)
T ss_dssp CCEEEEEEESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSC-CTTCEEEEEEEECTTTCCHHHHHHHHHHHSCTTST
T ss_pred ccceEEEecCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhh-cCCceEEEEEEECCCcCCHHHHHHHHHHhcCCccc
Confidence 46899999999999999999999999999999999999999999 55 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCC
Q 032840 121 FGQGPDVGNQYR 132 (132)
Q Consensus 121 ~~Qg~D~G~qYR 132 (132)
||||+|+|+|||
T Consensus 103 nrQG~D~GtQYR 114 (203)
T 1nwa_A 103 DRQGNDRGTSYR 114 (203)
T ss_dssp TEETTEESGGGC
T ss_pred CCCCCCCCcccc
Confidence 999999999999
No 8
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=100.00 E-value=9.9e-44 Score=296.52 Aligned_cols=91 Identities=37% Similarity=0.644 Sum_probs=88.7
Q ss_pred CccEEEEcCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCcccc--CCceeEEEEEecCCCCCHHHHHHHHHhcCCCCC
Q 032840 42 PLKAAVFALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNL--GDHAESVQVEYDPRVINFRQLLEVFWTSHDCRQ 119 (132)
Q Consensus 42 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v--~gh~E~V~V~yDp~~is~~~Ll~~f~~~hdPt~ 119 (132)
++++|+||||||||+|+.|.++|||++|+|||+||.++||||++| +||+|+|+|+|||++|||++||++||++||||+
T Consensus 1 ~~~~a~fagGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~hDPT~ 80 (313)
T 3e0m_A 1 HMAEIYLAGGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRVIDPLS 80 (313)
T ss_dssp -CEEEEEECSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHHSCTTC
T ss_pred CccEEEEecCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhhcCCCc
Confidence 368999999999999999999999999999999999999999999 499999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC
Q 032840 120 VFGQGPDVGNQYR 132 (132)
Q Consensus 120 ~~~Qg~D~G~qYR 132 (132)
.||||+|+|+|||
T Consensus 81 ~nrQG~D~G~QYR 93 (313)
T 3e0m_A 81 INQQGNDRGRQYR 93 (313)
T ss_dssp SSEETTEESGGGC
T ss_pred CCCcCCCCccccc
Confidence 9999999999999
No 9
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=96.67 E-value=0.0021 Score=39.75 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=41.0
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|+.+.+++||.++.+-+..+ .+.|.||+..++.++|.+..
T Consensus 14 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 60 (74)
T 3dxs_X 14 AACSNSVEAALMNVNGVFKASVALLQN---------------RADVVFDPNLVKEEDIKEEI 60 (74)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEGGGT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 468899999999999999999988754 67899999999999998775
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=96.33 E-value=0.0084 Score=35.23 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=40.1
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 58 (68)
T 1cpz_A 12 NHCVARIEEAVGRISGVKKVKVQLKKE---------------KAVVKFDEANVQATEICQAI 58 (68)
T ss_dssp SSHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999999887654 56789999989988887753
No 11
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=96.24 E-value=0.0096 Score=35.48 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=40.2
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1osd_A 15 SACPITVKKAISKVEGVSKVDVTFETR---------------QAVVTFDDAKTSVQKLTKAT 61 (72)
T ss_dssp TTHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999999887654 56789999999988888764
No 12
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=96.15 E-value=0.0068 Score=41.91 Aligned_cols=49 Identities=27% Similarity=0.341 Sum_probs=42.2
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHh
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~ 113 (132)
.+|-|.+|+.+.+++||.+..+-++.+ .+.|.|||..++.++|++..=+
T Consensus 86 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~~ 134 (151)
T 1p6t_A 86 AACANRIEKRLNKIEGVANAPVNFALE---------------TVTVEYNPKEASVSDLKEAVDK 134 (151)
T ss_dssp SSHHHHHHHHHTTSSSEEECCEETTTT---------------EEEEEECTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccCC---------------EEEEEECCCCCCHHHHHHHHHH
Confidence 479999999999999999998887654 6779999999999999887643
No 13
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=96.04 E-value=0.0093 Score=35.55 Aligned_cols=47 Identities=28% Similarity=0.369 Sum_probs=39.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 17 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 63 (71)
T 2l3m_A 17 GHCVNAIESSVKELNGVEQVKVQLAEG---------------TVEVTIDSSVVTLKDIVAVI 63 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 368889999999999999999887654 56789999999998887753
No 14
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=95.97 E-value=0.017 Score=33.82 Aligned_cols=47 Identities=26% Similarity=0.342 Sum_probs=38.9
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (71)
T 2ldi_A 15 AACASSIERALERLKGVAEASVTVATG---------------RLTVTYDPKQVSEITIQERI 61 (71)
T ss_dssp SGGGHHHHTGGGGCSSEEEEEEETTTT---------------EEEEEECTTTCCTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 578999999999999999988877654 56689999888888877653
No 15
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=95.86 E-value=0.018 Score=34.36 Aligned_cols=48 Identities=25% Similarity=0.261 Sum_probs=40.0
Q ss_pred cCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 49 agGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
..+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 17 C~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 64 (76)
T 1opz_A 17 CAACAARIEKGLKRMPGVTDANVNLATE---------------TVNVIYDPAETGTAAIQEKI 64 (76)
T ss_dssp STTHHHHHHHHHHTSTTEEEEEEEGGGT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 3578899999999999999998887644 56789999989988887754
No 16
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=95.75 E-value=0.016 Score=34.71 Aligned_cols=47 Identities=19% Similarity=0.416 Sum_probs=39.1
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 16 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 62 (75)
T 1yjr_A 16 ASCVHKIESSLTKHRGILYCSVALATN---------------KAHIKYDPEIIGPRDIIHTI 62 (75)
T ss_dssp TTHHHHHHHHHTTSTTEEEEEEETTTT---------------EEEEEECTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 578999999999999999998877644 57789999888888777653
No 17
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=95.75 E-value=0.026 Score=35.57 Aligned_cols=48 Identities=21% Similarity=0.300 Sum_probs=40.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..=
T Consensus 21 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~ 68 (84)
T 1q8l_A 21 HSCTSTIEGKIGKLQGVQRIKVSLDNQ---------------EATIVYQPHLISVEEMKKQIE 68 (84)
T ss_dssp CSSCHHHHHHHHTCTTEEEEEECSTTT---------------EEEEEECTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHHH
Confidence 479999999999999999998877644 677899999999988887643
No 18
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=95.73 E-value=0.016 Score=33.48 Aligned_cols=47 Identities=21% Similarity=0.380 Sum_probs=38.7
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 60 (69)
T 2qif_A 14 QHCVKAVETSVGELDGVSAVHVNLEAG---------------KVDVSFDADKVSVKDIADAI 60 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 468899999999999999988877644 56689999989988887653
No 19
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=95.72 E-value=0.0094 Score=38.77 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=40.3
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|+.+.+++||.++.+-+..+ .+.|.|||..++.++|.+..
T Consensus 15 ~~C~~~Ie~~L~~~~GV~~v~v~l~~~---------------~~~V~~~~~~~~~~~i~~~i 61 (90)
T 2g9o_A 15 KSCVSNIESTLSALQYVSSIVVSLENR---------------SAIVVYNASSVTPESLRKAI 61 (90)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEETTTT---------------EEEEEECCSSCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 368999999999999999999887754 67799999989988888764
No 20
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=95.64 E-value=0.018 Score=34.82 Aligned_cols=47 Identities=26% Similarity=0.446 Sum_probs=39.8
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 60 (75)
T 3cjk_B 14 NSCVWTIEQQIGKVNGVHHIKVSLEEK---------------NATIIYDPKLQTPKTLQEAI 60 (75)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 368899999999999999999887654 56789999989988888764
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=95.58 E-value=0.017 Score=35.46 Aligned_cols=47 Identities=26% Similarity=0.446 Sum_probs=39.8
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 20 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 66 (79)
T 1kvi_A 20 NSCVWTIEQQIGKVNGVHHIKVSLEEK---------------NATIIYDPKLQTPKTLQEAI 66 (79)
T ss_dssp TTTHHHHHHHHHHSSSCCCEEEEGGGT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999888877644 67789999989988887764
No 22
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=95.57 E-value=0.022 Score=38.59 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=41.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
.+|-|.+|+.+.+++||.++.+-+..+ .+.|.|||..++.++|.+..=
T Consensus 20 ~~Ca~~Ie~~L~~~~GV~~v~v~~~~~---------------~~~V~~~~~~~~~~~i~~~i~ 67 (111)
T 2ofg_X 20 TSCKLKIEGSLERLKGVAEASVTVATG---------------RLTVTYDPKQVSEITIQERIA 67 (111)
T ss_dssp GGTHHHHHHHHTTSSSEEEEEEETTTT---------------EEEEEECTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEECCCC---------------EEEEEECCCCCCHHHHHHHHH
Confidence 489999999999999999999988754 677999999999988888653
No 23
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=95.45 E-value=0.016 Score=35.48 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=39.0
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (77)
T 1y3j_A 15 ASCVANIERNLRREEGIYSILVALMAG---------------KAEVRYNPAVIQPPMIAEFI 61 (77)
T ss_dssp CSHHHHHHHHHTTSSSEEECCCBTTTT---------------BEEEEECTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 579999999999999999888766543 56689999989988888764
No 24
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=95.39 E-value=0.01 Score=40.68 Aligned_cols=47 Identities=21% Similarity=0.413 Sum_probs=40.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|+.+.+++||.+..+-+..+ .+.|.|||..++.++|++..
T Consensus 92 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 138 (149)
T 2ew9_A 92 ASCVHNIESKLTRTNGITYASVALATS---------------KALVKFDPEIIGPRDIIKII 138 (149)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEETTTT---------------EEEEECCTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 378899999999999999999887654 67799999999999888764
No 25
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=95.32 E-value=0.012 Score=35.04 Aligned_cols=47 Identities=26% Similarity=0.240 Sum_probs=39.2
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (72)
T 1aw0_A 15 NSCVQSIEGVISKKPGVKSIRVSLANS---------------NGTVEYDPLLTSPETLRGAI 61 (72)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCCcCCHHHHHHHH
Confidence 368899999999999999888877654 56789999988988887754
No 26
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=95.15 E-value=0.027 Score=33.99 Aligned_cols=47 Identities=17% Similarity=0.083 Sum_probs=39.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.| +..++.++|.+..=
T Consensus 14 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~-~~~~~~~~i~~~i~ 60 (69)
T 4a4j_A 14 TSCASSIERAIAKVPGVQSCQVNFALE---------------QAVVSY-HGETTPQILTDAVE 60 (69)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEE-CTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEE-CCCCCHHHHHHHHH
Confidence 468899999999999999999987654 667899 78899999987653
No 27
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=95.13 E-value=0.028 Score=33.17 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=35.5
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+. ++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~i 60 (71)
T 2xmw_A 15 AACASSIERAIAKVPGVQSCQVNFALE---------------QAVVSYHGE-TTPQILTDAV 60 (71)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEEC----CHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCC---------------EEEEEECCC-CCHHHHHHHH
Confidence 468899999999999999999887654 567899987 8888887653
No 28
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=94.95 E-value=0.046 Score=31.69 Aligned_cols=46 Identities=24% Similarity=0.224 Sum_probs=37.2
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+.. +.++|.+..
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~-~~~~i~~~i 58 (66)
T 1yg0_A 13 NHCVDKIEKFVGEIEGVSFIDVSVEKK---------------SVVVEFDAPA-TQDLIKEAL 58 (66)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEETTTT---------------EEEEEECTTC-CHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEEcCCC---------------EEEEEECCCC-CHHHHHHHH
Confidence 478999999999999999988877644 5678999875 777777653
No 29
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=94.88 E-value=0.04 Score=32.59 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=38.0
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+. ++.++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~-~~~~~i~~~i 57 (69)
T 2kt2_A 12 DSCAAHVKEALEKVPGVQSALVSYPKG---------------TAQLAIVPG-TSPDALTAAV 57 (69)
T ss_dssp THHHHHHHHHHHHSTTEEEEEEETTTT---------------EEEEEECTT-SCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEccCC---------------EEEEEECCC-CCHHHHHHHH
Confidence 468899999999999999999887654 566899987 6888887764
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=94.27 E-value=0.043 Score=33.29 Aligned_cols=47 Identities=28% Similarity=0.391 Sum_probs=38.1
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 15 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 61 (80)
T 1jww_A 15 AACANRIEKRLNKIEGVANAPVNFALE---------------TVTVEYNPKEASVSDLKEAV 61 (80)
T ss_dssp HHHHHHHHHHHHTSTTEEECCCCSSSS---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 468889999999999998887766543 56789999989988887754
No 31
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=93.80 E-value=0.13 Score=33.13 Aligned_cols=47 Identities=21% Similarity=0.159 Sum_probs=39.3
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 28 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 74 (95)
T 2kkh_A 28 TSEVPIIENILKSLDGVKEYSVIVPSR---------------TVIVVHDSLLISPFQIAKAL 74 (95)
T ss_dssp TTTHHHHHHHHHHSSSEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 478899999999999999998877644 56689999888888887764
No 32
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=93.77 E-value=0.081 Score=38.87 Aligned_cols=47 Identities=28% Similarity=0.411 Sum_probs=40.5
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|+.+.+++||.+..+-+..+ .+.|.|||..++.++|++..
T Consensus 134 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 180 (202)
T 2rop_A 134 ASCVHSIEGMISQLEGVQQISVSLAEG---------------TATVLYNPAVISPEELRAAI 180 (202)
T ss_dssp THHHHHHHHHGGGSSSEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEccCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 478899999999999999999987654 67789999999999888765
No 33
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=93.17 E-value=0.11 Score=30.62 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=36.8
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.|| ..++.++|.+..
T Consensus 14 ~~c~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v~~~-~~~~~~~i~~~i 59 (72)
T 1fvq_A 14 SACTNTINTQLRALKGVTKCDISLVTN---------------ECQVTYD-NEVTADSIKEII 59 (72)
T ss_dssp HHHHHHHHHHHHTSSSEEEECCBTTTT---------------EEEEEEC-TTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEEC-CCCCHHHHHHHH
Confidence 368889999999999999888776543 5678899 778888887754
No 34
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=93.14 E-value=0.18 Score=30.18 Aligned_cols=44 Identities=20% Similarity=0.139 Sum_probs=35.1
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~ 110 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.||+. ..++|.+.
T Consensus 15 ~~C~~~ie~~l~~~~gV~~~~v~~~~~---------------~~~v~~~~~--~~~~i~~~ 58 (73)
T 1mwy_A 15 AACARKVENAVRQLAGVNQVQVLFATE---------------KLVVDADND--IRAQVESA 58 (73)
T ss_dssp TTHHHHHHHHHHTSSSEEEEEEETTTT---------------EEEEEESSC--CHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEecCC---------------EEEEEECCC--CHHHHHHH
Confidence 579999999999999999999887654 566889984 35666654
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=92.56 E-value=0.2 Score=36.68 Aligned_cols=47 Identities=26% Similarity=0.297 Sum_probs=39.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-|.+|..+.+++||.+..+-+..+ .+.|.||+..++.++|.+..
T Consensus 32 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 78 (202)
T 2rop_A 32 KSCVLNIEENIGQLLGVQSIQVSLENK---------------TAQVKYDPSCTSPVALQRAI 78 (202)
T ss_dssp STHHHHHHHHTTSBTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEecCC---------------EEEEEECCCCCCHHHHHHHH
Confidence 578999999999999999999887654 56788999988888877653
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=90.98 E-value=0.24 Score=33.60 Aligned_cols=47 Identities=21% Similarity=0.328 Sum_probs=37.9
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.|||..++.++|.+..
T Consensus 16 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i 62 (149)
T 2ew9_A 16 ASCVSNIERNLQKEAGVLSVLVALMAG---------------KAEIKYDPEVIQPLEIAQFI 62 (149)
T ss_dssp SSHHHHHHHHHHTTSSCCCEEEETTTT---------------EEEEEECTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC---------------EEEEEEcCCCCCHHHHHHHH
Confidence 588999999999999998888776543 56688999888887776653
No 37
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=90.33 E-value=0.22 Score=44.51 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=42.9
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHh
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~ 113 (132)
++|-|.+|+.+.++|||.++++-++.+ .+.|.||+..++.++|.+..=+
T Consensus 14 a~Ca~~Ie~~L~~~~GV~~v~Vnl~~~---------------~~~V~~d~~~~~~~~i~~ai~~ 62 (723)
T 3j09_A 14 AMCVKSIETAVGSLEGVEEVRVNLATE---------------TAFIRFDEKRIDFETIKRVIED 62 (723)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTT---------------EEEEEECTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCceEEEEEcCCC---------------EEEEEeCCCcCCHHHHHHHHHh
Confidence 478999999999999999999988754 6779999999999999987755
No 38
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=88.21 E-value=0.5 Score=28.95 Aligned_cols=43 Identities=9% Similarity=0.084 Sum_probs=34.6
Q ss_pred cCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 49 agGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
-++|-+.+|+.+.+ +||.++.+-+. ...+.|.|| +.++|.+..
T Consensus 16 C~~C~~~ie~~l~~-~gv~~~~v~~~---------------~~~~~v~~~----~~~~i~~~i 58 (73)
T 3fry_A 16 CHHCVARVKKALEE-AGAKVEKVDLN---------------EAVVAGNKE----DVDKYIKAV 58 (73)
T ss_dssp CGGGHHHHHHHHHH-TTCEEEEECSS---------------EEEEEEEGG----GHHHHHHHH
T ss_pred CHHHHHHHHHHhcc-CCcEEEEEEcc---------------CCEEEEEEC----CHHHHHHHH
Confidence 35799999999999 99999998775 456788998 667777655
No 39
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=86.12 E-value=0.85 Score=27.60 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=34.7
Q ss_pred cCCCcchhhhhhccCC-CeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 49 ALGSFWRSEAVFGCLN-GVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 49 agGCFWg~E~~F~~l~-GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
-.+|-+.+|+.+.+++ ||.+..+-+..+ .+.|.+ .++.++|.+..
T Consensus 15 C~~C~~~ie~~l~~~~~GV~~~~v~~~~~---------------~~~v~~---~~~~~~i~~~i 60 (73)
T 1cc8_A 15 CSGCSGAVNKVLTKLEPDVSKIDISLEKQ---------------LVDVYT---TLPYDFILEKI 60 (73)
T ss_dssp SHHHHHHHHHHHHTTTTSEEEEEEETTTT---------------EEEEEE---SSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCceEEEEECCCC---------------EEEEEE---eCCHHHHHHHH
Confidence 4679999999999999 999999988755 445566 25677777654
No 40
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=85.73 E-value=0.63 Score=28.14 Aligned_cols=43 Identities=21% Similarity=0.267 Sum_probs=33.9
Q ss_pred CCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 51 GSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 51 GCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
+|-+.+|+.+.+++|| ++.+-+..+ .+.|.++ ++.++|++..-
T Consensus 14 ~C~~~i~~~l~~~~gV-~v~v~~~~~---------------~~~v~~~---~~~~~i~~~i~ 56 (68)
T 3iwl_A 14 GCAEAVSRVLNKLGGV-KYDIDLPNK---------------KVCIESE---HSMDTLLATLK 56 (68)
T ss_dssp HHHHHHHHHHHHHCSE-EEEEETTTT---------------EEEEEES---SCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCe-EEEEEcCCC---------------EEEEEec---CCHHHHHHHHH
Confidence 6788889999999999 999988754 4556663 57788887664
No 41
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=85.52 E-value=0.35 Score=32.88 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=26.3
Q ss_pred CCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCC----------CHHHHHHHH
Q 032840 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVI----------NFRQLLEVF 111 (132)
Q Consensus 63 l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~i----------s~~~Ll~~f 111 (132)
.+||++.+.||. .|.|.|||.++ +++.|....
T Consensus 45 ~~Gv~EiVPa~~-----------------SllV~ydp~~i~~~~~~~~~~~~~~l~~~L 86 (101)
T 2kwa_A 45 FPGFIECIPAFT-----------------SLTVFYDMYEVYKHLPQGISSPFESVKRDV 86 (101)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECHHHHHTTCCTTCCSHHHHHHHHH
T ss_pred CCCeEEeccCce-----------------EEEEEEcchHhcccccccccCCHHHHHHHH
Confidence 699999999997 68899999988 676665543
No 42
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=82.64 E-value=1.9 Score=29.22 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=35.8
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEV 110 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~ 110 (132)
.+|-+.+|..+.+++||.+..+-+..+ .+.|.||+..++.+++.+.
T Consensus 18 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~ 63 (151)
T 1p6t_A 18 AACAARIEKGLKRMPGVTDANVNLATE---------------TVNVIYDPAETGTAAIQEK 63 (151)
T ss_dssp SHHHHHHHHHHTTSSSEEEEEEEGGGT---------------EEEEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEccCC---------------EEEEEEcCCcCCHHHHHHH
Confidence 478888999999999999888877643 4457788887777776554
No 43
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=80.07 E-value=2.6 Score=33.03 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=27.5
Q ss_pred CCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 63 l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
++||++++.||. .+.|.|||.+++..+|++..
T Consensus 39 ~~gv~e~vP~~~-----------------sl~V~~dp~~~~~~~l~~~l 70 (225)
T 2phc_B 39 PEWLVELVPAYS-----------------SLLVIYDPLKASYEEVESYL 70 (225)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHHH
T ss_pred CCCeEEeeccce-----------------EEEEEEcCCcCCHHHHHHHH
Confidence 799999999996 68899999999988776543
No 44
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.19 E-value=2.3 Score=27.93 Aligned_cols=47 Identities=11% Similarity=0.035 Sum_probs=36.2
Q ss_pred cCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHh
Q 032840 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (132)
Q Consensus 49 agGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~ 113 (132)
-.+|-|.+|+.+.+++||.++.+-+..+ .+.|.|+ ++.++|++..-+
T Consensus 29 C~~C~~~Ie~aL~~l~GV~~v~vdl~~~---------------~~~V~~~---~~~~~i~~~i~~ 75 (98)
T 2crl_A 29 CQSCVDAVRKSLQGVAGVQDVEVHLEDQ---------------MVLVHTT---LPSQEVQALLEG 75 (98)
T ss_dssp SHHHHHHHHHTTTTCTTCCEEEEETTTT---------------EEEEEES---SCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCceEEEEECCCC---------------EEEEEEe---CCHHHHHHHHHH
Confidence 4578899999999999999999887654 4556774 567778777643
No 45
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=76.26 E-value=2.3 Score=25.00 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=28.3
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecC
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDP 99 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp 99 (132)
.+|-+.+|..+.+++||.+..+-+.. +.+.|.+|+
T Consensus 15 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~ 49 (71)
T 2aj0_A 15 TNCAAKFERNVKEIEGVTEAIVNFGA---------------SKITVTGEA 49 (71)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEECCSS---------------EEEEEEESC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECCC---------------CEEEEEecC
Confidence 35889999999999999998887764 356677887
No 46
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=75.83 E-value=0.84 Score=26.81 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=32.4
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.++ ||.+..+-+..+ .+.|.||+. ++|.+..
T Consensus 13 ~~C~~~i~~~l~~~-gv~~~~v~~~~~---------------~~~v~~~~~----~~i~~~i 54 (67)
T 2kyz_A 13 NHCKMRISKALEEL-GVKNYEVSVEEK---------------KVVVETENL----DSVLKKL 54 (67)
T ss_dssp HHHHHHHHHHHHHH-TCSEEEEETTTT---------------EEEEECSCH----HHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCeEEEEECCCC---------------EEEEEECCH----HHHHHHH
Confidence 47889999999999 999888877654 566788875 5565543
No 47
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=74.61 E-value=1.3 Score=28.34 Aligned_cols=44 Identities=9% Similarity=-0.147 Sum_probs=33.5
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.|.|+ ++.++|.+..
T Consensus 34 ~~C~~~Ie~aL~~~~GV~~v~v~l~~~---------------~~~V~~~---~~~~~i~~~i 77 (85)
T 2k2p_A 34 GHCAGVIKGAIEKTVPGAAVHADPASR---------------TVVVGGV---SDAAHIAEII 77 (85)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEETTTT---------------EEEEESC---CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeeEEEEECCCC---------------EEEEEec---CCHHHHHHHH
Confidence 478899999999999999998887654 4556664 5677776653
No 48
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=71.92 E-value=2.1 Score=24.78 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=32.0
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+|-+.+|+.+.+++||.+..+-+..+ .+.| + ..++.++|.+..
T Consensus 12 ~~C~~~i~~~l~~~~gv~~~~v~~~~~---------------~~~v--~-~~~~~~~i~~~i 55 (66)
T 2roe_A 12 NHCVMAVTKALKKVPGVEKVEVSLEKG---------------EALV--E-GTADPKALVQAV 55 (66)
T ss_dssp HHHHHHHHHHHHTSTTCCCEEECSSSC---------------BEEE--C-SCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEeCCC---------------EEEE--C-CCCCHHHHHHHH
Confidence 468899999999999999888877654 2223 3 446777777654
No 49
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=70.06 E-value=5.8 Score=34.63 Aligned_cols=34 Identities=26% Similarity=0.493 Sum_probs=29.7
Q ss_pred CCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHh
Q 032840 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (132)
Q Consensus 63 l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~ 113 (132)
++||++++.+|. .+.|.|||.++++++|++..-+
T Consensus 33 ~~gv~e~vP~~~-----------------sllV~ydp~~~~~~~l~~~l~~ 66 (494)
T 3oep_A 33 PPGLLDAVPAYG-----------------VLYLEYDPRRLSRGRLLRLLKG 66 (494)
T ss_dssp CTTEEEEEEETT-----------------EEEEEECTTTSCHHHHHHHHHH
T ss_pred CCCcEEeecccc-----------------EEEEEecCCCCCHHHHHHHHHH
Confidence 699999999986 6889999999999999887644
No 50
>1ans_A Neurotoxin III; NMR {Anemonia sulcata} SCOP: g.11.1.1
Probab=69.27 E-value=1.2 Score=24.41 Aligned_cols=7 Identities=29% Similarity=0.567 Sum_probs=6.0
Q ss_pred CCCcchh
Q 032840 50 LGSFWRS 56 (132)
Q Consensus 50 gGCFWg~ 56 (132)
+|||||-
T Consensus 9 ~gCpWGQ 15 (27)
T 1ans_A 9 GGCPWGQ 15 (27)
T ss_dssp TTCSSSC
T ss_pred cCCcccc
Confidence 8999984
No 51
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=67.32 E-value=6.3 Score=37.77 Aligned_cols=34 Identities=32% Similarity=0.481 Sum_probs=29.3
Q ss_pred CCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHHh
Q 032840 63 LNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFWT 113 (132)
Q Consensus 63 l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~~ 113 (132)
++||++++.||. .+.|.|||.++++++|++..-+
T Consensus 877 ~~gv~e~vP~~~-----------------sl~v~~dp~~~~~~~l~~~l~~ 910 (1236)
T 3va7_A 877 TVGIVEMSQGVR-----------------SVLIEFDGSKINQKALLKCLIA 910 (1236)
T ss_dssp CTTEEEEEECSS-----------------EEEEEECTTTSCHHHHHHHHHH
T ss_pred CCCeEEeeccce-----------------EEEEEECCCCCCHHHHHHHHHH
Confidence 799999999996 6889999999999988876533
No 52
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=55.78 E-value=1.5 Score=24.78 Aligned_cols=27 Identities=4% Similarity=-0.142 Sum_probs=22.8
Q ss_pred CCCcchhhhhhccCCCeEEEEeeecCC
Q 032840 50 LGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (132)
Q Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG 76 (132)
.+|-+.+|..+.+++||.+..+-+..+
T Consensus 13 ~~C~~~i~~~l~~~~gv~~~~v~~~~~ 39 (64)
T 2xmm_A 13 EACAEAVTKAVQNEDAQATVQVDLTSK 39 (64)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEECTTTC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 468899999999999999888877644
No 53
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=54.25 E-value=19 Score=27.50 Aligned_cols=46 Identities=9% Similarity=0.086 Sum_probs=35.0
Q ss_pred cCCCcchhhhhhccCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 49 agGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
-.+|-+.+|+.+.+++||.++.+-+..+ .+.|.++ ++.++|.+..=
T Consensus 16 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~---------------~v~V~~~---~~~~~I~~aI~ 61 (222)
T 1qup_A 16 CENCVNDIKACLKNVPGINSLNFDIEQQ---------------IMSVESS---VAPSTIINTLR 61 (222)
T ss_dssp STTHHHHHHHHHTTCTTEEEEEEETTTT---------------EEEEEES---SCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCeeEEEEEcCCC---------------EEEEecc---CCHHHHHHHHH
Confidence 5789999999999999999999988754 3445543 56677776653
No 54
>3mml_B Allophanate hydrolase subunit 1; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=49.94 E-value=14 Score=29.05 Aligned_cols=32 Identities=19% Similarity=0.056 Sum_probs=25.7
Q ss_pred cCCCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 62 CLNGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 62 ~l~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.++||++++.||. .+.|.|||..++. ++++..
T Consensus 53 ~~~gv~e~vP~~~-----------------SllV~ydp~~~~~-~~~~~l 84 (228)
T 3mml_B 53 ELLGVVDIVPAAR-----------------TVLVKLAGPRYQA-PTRQRL 84 (228)
T ss_dssp TCTTEEEEEECSS-----------------EEEEEESSGGGHH-HHHHHH
T ss_pred CCCCcEEeecccc-----------------EEEEEEcCccCCH-HHHHHH
Confidence 4699999999986 6889999999887 455543
No 55
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=39.19 E-value=36 Score=26.53 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=25.0
Q ss_pred cCCCcchhhhhhccCCCeEEEEeeecCC
Q 032840 49 ALGSFWRSEAVFGCLNGVVRTTVGYAGG 76 (132)
Q Consensus 49 agGCFWg~E~~F~~l~GV~~t~vGYagG 76 (132)
-.+|-+.+|+.+.+++||.++.+-+..+
T Consensus 17 C~~Ca~~IekaL~~l~GV~~v~Vnl~~~ 44 (249)
T 1jk9_B 17 CENCVNDIKACLKNVPGINSLNFDIEQQ 44 (249)
T ss_dssp SSSHHHHHHHHHTTCTTEEEEEEETTTT
T ss_pred cHHHHHHHHHHHhccCCeeEEEEEcCCC
Confidence 5789999999999999999999988755
No 56
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=38.45 E-value=8.3 Score=27.17 Aligned_cols=40 Identities=15% Similarity=0.331 Sum_probs=27.2
Q ss_pred hhhhhhccC--CCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 55 RSEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 55 g~E~~F~~l--~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
.+++.+.+| .|++.+.-| .||-. +.-||+.|++.++++..
T Consensus 39 ~l~kIl~~L~~aGlv~s~rG-~GGy~----------------Lar~p~~Itl~dVi~av 80 (145)
T 1xd7_A 39 VVRRMISLLKKADILTSRAG-VPGAS----------------LKKDPADISLLEVYRAV 80 (145)
T ss_dssp HHHHHHHHHHHTTSEECCSS-SSSCE----------------ESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHHCCceEeecC-CCCce----------------ecCCHHHCCHHHHHHHH
Confidence 357778777 799999999 77732 34456666666666654
No 57
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=33.03 E-value=18 Score=25.49 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=24.3
Q ss_pred hhhhhccC--CCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHH
Q 032840 56 SEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVF 111 (132)
Q Consensus 56 ~E~~F~~l--~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f 111 (132)
+++.+.+| .|++.++-| .||- ++.=||+.|++.++++.+
T Consensus 47 l~kil~~L~~~Glv~s~rG-~GGy----------------~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 47 IRKIMSYLKQAGFVYVNRG-PGGA----------------GLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp HHHHHHHHHHTTSEEEC----CCE----------------EESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEccC-CCce----------------EeCCChhhCcHHHHHHHH
Confidence 56777766 799999889 6662 244456667777777654
No 58
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=31.92 E-value=26 Score=25.82 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=21.8
Q ss_pred EEeeecCCCCCCCCccccCCceeEEEEEecCCCCC
Q 032840 69 TTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVIN 103 (132)
Q Consensus 69 t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is 103 (132)
+..|.+||..-..+ +.|.-|++.|..||+.+.
T Consensus 68 eveg~sGgGlVkVt---vnG~~ev~~I~Idp~lld 99 (143)
T 1ybx_A 68 TVEASAGGGAVTVV---ATGRKDIKEITIKPEVVD 99 (143)
T ss_dssp EEEEEETTTTEEEE---EETTCCEEEEEECGGGCC
T ss_pred EEEEEECCCEEEEE---EecCceEEEEEECHHHcC
Confidence 45566665332111 258899999999999985
No 59
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=31.41 E-value=27 Score=24.30 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=19.1
Q ss_pred CceeEEEEEecCCCCCHHHHHH
Q 032840 88 DHAESVQVEYDPRVINFRQLLE 109 (132)
Q Consensus 88 gh~E~V~V~yDp~~is~~~Ll~ 109 (132)
|.+-.=.|.||+++++-++||+
T Consensus 43 gYAk~g~ViFDe~kl~~e~lLe 64 (96)
T 2f40_A 43 PYAKVAEVVIDDSKVNIEELKE 64 (96)
T ss_dssp TTTTCCEEECCBCSCSHHHHHH
T ss_pred cccccceEEECcccCCHHHHHH
Confidence 5566667999999999999998
No 60
>1vsr_A Protein (VSR endonuclease); DNA repair, mismatch recognition, hydrolase; 1.80A {Escherichia coli} SCOP: c.52.1.15 PDB: 1odg_A*
Probab=30.46 E-value=21 Score=25.85 Aligned_cols=20 Identities=25% Similarity=0.649 Sum_probs=15.7
Q ss_pred CCCCCCccEEEEcCCCcchh
Q 032840 37 DELGRPLKAAVFALGSFWRS 56 (132)
Q Consensus 37 ~~~~~~~~~a~fagGCFWg~ 56 (132)
|..-...+.|+|--||||+-
T Consensus 31 D~v~~~~rlvIfvdGcfWHg 50 (136)
T 1vsr_A 31 DFVVDEYRCVIFTHGCFWHH 50 (136)
T ss_dssp SEEEGGGTEEEEEECTTTTT
T ss_pred cEEeccCCEEEEEeCccccC
Confidence 44345788999999999994
No 61
>1cw0_A Protein (DNA mismatch endonuclease); protein-DNA complex, intercalation, zinc, hydrolase/DNA; HET: DNA; 2.30A {Escherichia coli} SCOP: c.52.1.15
Probab=28.73 E-value=24 Score=26.15 Aligned_cols=20 Identities=25% Similarity=0.649 Sum_probs=15.7
Q ss_pred CCCCCCccEEEEcCCCcchh
Q 032840 37 DELGRPLKAAVFALGSFWRS 56 (132)
Q Consensus 37 ~~~~~~~~~a~fagGCFWg~ 56 (132)
|..-...+.|+|--||||+-
T Consensus 50 Dfv~~~~rlvIfVdGcfWHg 69 (155)
T 1cw0_A 50 DFVVDEYRCVIFTHGCFWHH 69 (155)
T ss_dssp SEEEGGGTEEEEEECTTTTT
T ss_pred cEEcccCCEEEEEeChhhcc
Confidence 44345788999999999994
No 62
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=22.22 E-value=10 Score=28.05 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=32.5
Q ss_pred EEEEeeecCCCCCCCCccccCCceeEEEEEecCCCC-CHHHHHHHHHhcCCCCC
Q 032840 67 VRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVI-NFRQLLEVFWTSHDCRQ 119 (132)
Q Consensus 67 ~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~i-s~~~Ll~~f~~~hdPt~ 119 (132)
++-+..|+||. |=+.+....+.|.+-+.+|+..+ .|.+..+..|+..+|..
T Consensus 130 iD~~~~~~GS~--N~t~~~~~~n~E~~~~i~~~~~~~~~~~~F~~~W~~~~p~~ 181 (196)
T 4ggj_A 130 VDKKVLITGSL--NWTTQAIQNNRENVLIMEDTEYVRLFLEEFERIWEEFDPTK 181 (196)
T ss_dssp ETTTEEEEESC--CBCHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHTCCC-
T ss_pred EcceEEEecCc--cCChhhhcccceeEEEEECHHHHHHHHHHHHHHHHhCCCCC
Confidence 34445666652 33333334568999999998754 35677777798888864
No 63
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=21.03 E-value=89 Score=20.60 Aligned_cols=24 Identities=4% Similarity=0.245 Sum_probs=19.5
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCC
Q 032840 99 PRVINFRQLLEVFWTSHDCRQVFG 122 (132)
Q Consensus 99 p~~is~~~Ll~~f~~~hdPt~~~~ 122 (132)
|..+|..+|++..|+..+....+.
T Consensus 24 P~~~tvK~Li~~l~ea~~l~~~~~ 47 (81)
T 2bps_A 24 SDYHPVKKVIDIAWQAQSVSMPPR 47 (81)
T ss_dssp ETTSBTTHHHHHHHHHSCCCSCCC
T ss_pred CCchhHHHHHHHHHHHhCCCcCCC
Confidence 788999999999999887654443
No 64
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=21.00 E-value=54 Score=23.74 Aligned_cols=41 Identities=27% Similarity=0.454 Sum_probs=31.4
Q ss_pred hhhhhccC--CCeEEEEeeecCCCCCCCCccccCCceeEEEEEecCCCCCHHHHHHHHH
Q 032840 56 SEAVFGCL--NGVVRTTVGYAGGSKTNPEFRNLGDHAESVQVEYDPRVINFRQLLEVFW 112 (132)
Q Consensus 56 ~E~~F~~l--~GV~~t~vGYagG~~~~PtY~~v~gh~E~V~V~yDp~~is~~~Ll~~f~ 112 (132)
+++.+.+| .|++.++-|=.|| .++.=+|+.|++.++++..=
T Consensus 61 l~kil~~L~~aGlv~s~rG~~GG----------------y~Lar~p~eItL~dVi~avE 103 (159)
T 3lwf_A 61 LEQLIGPLRNAGIVKSIRGAHGG----------------YVLNGDPEKITAGDIIRTLE 103 (159)
T ss_dssp HHHHHHHHHHTTSEEEECSTTCE----------------EEECSCTTTCBHHHHHHHHS
T ss_pred HHHHHHHHHHCCeEEEecCCCCc----------------eEecCCHHHCCHHHHHHHHc
Confidence 57777776 7999999887665 34556888899999888763
Done!