Query 032841
Match_columns 132
No_of_seqs 200 out of 1138
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 10:26:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032841.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032841hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zzx_A Thioredoxin; oxidoreduc 99.9 3.6E-24 1.2E-28 137.9 10.9 99 10-131 5-103 (105)
2 1wou_A Thioredoxin -related pr 99.9 1.3E-23 4.3E-28 138.1 8.4 114 10-131 9-122 (123)
3 2av4_A Thioredoxin-like protei 99.9 6.7E-23 2.3E-27 140.2 11.6 89 10-117 26-123 (160)
4 2qgv_A Hydrogenase-1 operon pr 99.9 8.5E-24 2.9E-28 142.5 5.0 98 8-129 22-124 (140)
5 2qsi_A Putative hydrogenase ex 99.9 4.8E-23 1.6E-27 138.4 7.9 100 7-129 19-122 (137)
6 3evi_A Phosducin-like protein 99.9 3.2E-21 1.1E-25 126.6 11.5 84 27-131 23-111 (118)
7 4euy_A Uncharacterized protein 99.9 3.1E-21 1E-25 122.8 9.3 86 25-130 16-101 (105)
8 3qfa_C Thioredoxin; protein-pr 99.9 4.4E-21 1.5E-25 124.5 9.5 84 26-130 30-113 (116)
9 3gnj_A Thioredoxin domain prot 99.8 5.7E-21 1.9E-25 121.9 9.6 100 6-130 7-106 (111)
10 2o8v_B Thioredoxin 1; disulfid 99.8 1.3E-20 4.5E-25 124.5 11.7 105 1-130 20-124 (128)
11 1t00_A Thioredoxin, TRX; redox 99.8 7.9E-21 2.7E-25 121.7 9.4 105 1-130 3-107 (112)
12 3f3q_A Thioredoxin-1; His TAG, 99.8 5.4E-21 1.9E-25 122.8 8.5 84 26-130 23-106 (109)
13 3tco_A Thioredoxin (TRXA-1); d 99.8 1.5E-20 5.1E-25 119.3 9.7 100 5-130 6-105 (109)
14 2voc_A Thioredoxin; electron t 99.8 2.4E-20 8.2E-25 120.0 10.7 99 6-131 4-102 (112)
15 2trx_A Thioredoxin; electron t 99.8 2.6E-20 8.9E-25 118.4 10.6 101 5-130 4-104 (108)
16 1nsw_A Thioredoxin, TRX; therm 99.8 2.3E-20 7.7E-25 118.2 9.9 100 6-131 3-102 (105)
17 1syr_A Thioredoxin; SGPP, stru 99.8 1.8E-20 6.2E-25 120.5 9.5 99 5-131 11-109 (112)
18 3aps_A DNAJ homolog subfamily 99.8 2.2E-21 7.6E-26 126.2 4.9 107 1-130 1-109 (122)
19 2oe3_A Thioredoxin-3; electron 99.8 4.2E-20 1.5E-24 119.7 10.7 96 11-131 18-113 (114)
20 3uvt_A Thioredoxin domain-cont 99.8 4E-20 1.4E-24 117.8 10.4 104 1-131 3-109 (111)
21 3die_A Thioredoxin, TRX; elect 99.8 5E-20 1.7E-24 116.4 10.8 100 5-131 5-104 (106)
22 3m9j_A Thioredoxin; oxidoreduc 99.8 5.5E-20 1.9E-24 116.2 10.9 98 10-130 5-102 (105)
23 2vlu_A Thioredoxin, thioredoxi 99.8 3.3E-20 1.1E-24 120.6 10.1 84 26-130 33-116 (122)
24 1thx_A Thioredoxin, thioredoxi 99.8 2.8E-20 9.6E-25 119.2 9.6 93 2-117 6-98 (115)
25 1gh2_A Thioredoxin-like protei 99.8 4.8E-20 1.7E-24 117.4 10.3 84 26-130 20-103 (107)
26 1dby_A Chloroplast thioredoxin 99.8 1.4E-20 4.7E-25 119.5 7.7 86 26-130 18-103 (107)
27 2yzu_A Thioredoxin; redox prot 99.8 5.6E-20 1.9E-24 116.5 10.1 100 5-130 3-102 (109)
28 3p2a_A Thioredoxin 2, putative 99.8 4.6E-20 1.6E-24 124.1 10.2 101 4-130 39-139 (148)
29 1qgv_A Spliceosomal protein U5 99.8 1.5E-19 5.2E-24 121.6 12.7 72 26-114 22-93 (142)
30 1ep7_A Thioredoxin CH1, H-type 99.8 2.9E-20 9.9E-25 118.9 8.7 84 27-130 24-107 (112)
31 3h79_A Thioredoxin-like protei 99.8 1.1E-20 3.8E-25 124.1 6.8 104 3-131 15-125 (127)
32 1xfl_A Thioredoxin H1; AT3G510 99.8 5.7E-20 2E-24 120.7 10.1 84 26-130 37-120 (124)
33 3gix_A Thioredoxin-like protei 99.8 4.2E-20 1.5E-24 125.3 9.6 74 26-116 22-104 (149)
34 2ppt_A Thioredoxin-2; thiredox 99.8 3E-20 1E-24 126.7 8.8 87 25-130 62-148 (155)
35 2pu9_C TRX-F, thioredoxin F-ty 99.8 5.6E-20 1.9E-24 117.8 9.6 100 5-130 7-107 (111)
36 2l6c_A Thioredoxin; oxidoreduc 99.8 5.4E-20 1.9E-24 118.2 9.1 102 1-130 1-102 (110)
37 1fb6_A Thioredoxin M; electron 99.8 6.3E-20 2.2E-24 115.8 9.2 100 6-130 3-102 (105)
38 3hz4_A Thioredoxin; NYSGXRC, P 99.8 4.4E-20 1.5E-24 123.4 8.9 75 26-117 23-97 (140)
39 3d6i_A Monothiol glutaredoxin- 99.8 6.8E-20 2.3E-24 117.4 9.4 86 25-130 19-105 (112)
40 3fk8_A Disulphide isomerase; A 99.8 1.5E-20 5.3E-25 124.1 6.5 91 26-130 28-129 (133)
41 2i4a_A Thioredoxin; acidophIle 99.8 7.5E-20 2.6E-24 115.8 9.3 102 5-131 4-105 (107)
42 1w4v_A Thioredoxin, mitochondr 99.8 5.8E-20 2E-24 119.5 8.9 86 26-130 30-115 (119)
43 1oaz_A Thioredoxin 1; immune s 99.8 3.5E-20 1.2E-24 121.8 7.7 106 1-131 1-120 (123)
44 2f51_A Thioredoxin; electron t 99.8 6.5E-20 2.2E-24 119.4 8.7 84 26-130 22-109 (118)
45 1r26_A Thioredoxin; redox-acti 99.8 1E-19 3.4E-24 120.0 9.7 84 26-130 36-119 (125)
46 2e0q_A Thioredoxin; electron t 99.8 1.4E-19 4.7E-24 113.6 9.9 97 7-130 3-99 (104)
47 3qou_A Protein YBBN; thioredox 99.8 4.4E-20 1.5E-24 136.1 8.8 103 4-130 8-110 (287)
48 3ul3_B Thioredoxin, thioredoxi 99.8 4.4E-20 1.5E-24 121.5 7.9 88 25-131 40-127 (128)
49 1faa_A Thioredoxin F; electron 99.8 1.6E-19 5.3E-24 117.8 10.0 100 5-130 20-120 (124)
50 3dxb_A Thioredoxin N-terminall 99.8 3.2E-19 1.1E-23 127.8 12.5 102 4-130 13-114 (222)
51 2dbc_A PDCL2, unnamed protein 99.8 2.2E-19 7.6E-24 119.7 10.9 84 26-130 29-117 (135)
52 1x5d_A Protein disulfide-isome 99.8 5.7E-20 2E-24 120.8 7.9 101 5-130 9-113 (133)
53 2i1u_A Thioredoxin, TRX, MPT46 99.8 1.6E-19 5.5E-24 116.9 9.8 101 5-130 14-114 (121)
54 1ti3_A Thioredoxin H, PTTRXH1; 99.8 2.8E-19 9.6E-24 114.3 10.7 100 12-129 11-111 (113)
55 1xwb_A Thioredoxin; dimerizati 99.8 2.4E-19 8.3E-24 113.3 10.1 86 26-131 19-104 (106)
56 3d22_A TRXH4, thioredoxin H-ty 99.8 1.6E-19 5.3E-24 120.1 9.3 84 26-130 45-128 (139)
57 2vim_A Thioredoxin, TRX; thior 99.8 5E-19 1.7E-23 111.5 10.7 84 26-130 18-101 (104)
58 3hxs_A Thioredoxin, TRXP; elec 99.8 7.7E-20 2.6E-24 121.7 7.0 86 26-130 50-135 (141)
59 2xc2_A Thioredoxinn; oxidoredu 99.8 3.8E-19 1.3E-23 115.0 9.9 83 26-130 32-114 (117)
60 2j23_A Thioredoxin; immune pro 99.8 1.5E-19 5.1E-24 118.0 7.6 99 8-130 18-117 (121)
61 2vm1_A Thioredoxin, thioredoxi 99.8 3.2E-19 1.1E-23 114.9 9.1 83 26-129 27-109 (118)
62 2dj1_A Protein disulfide-isome 99.8 1.4E-19 4.9E-24 120.1 7.2 99 5-130 19-120 (140)
63 3emx_A Thioredoxin; structural 99.8 8.9E-20 3E-24 121.4 6.1 79 29-117 33-111 (135)
64 1mek_A Protein disulfide isome 99.8 2E-19 6.9E-24 115.7 7.6 101 5-131 9-114 (120)
65 2wz9_A Glutaredoxin-3; protein 99.8 4.9E-19 1.7E-23 120.0 9.8 84 26-130 31-114 (153)
66 2dml_A Protein disulfide-isome 99.8 1.6E-19 5.4E-24 118.5 6.9 99 6-129 20-119 (130)
67 2l5l_A Thioredoxin; structural 99.8 3.3E-19 1.1E-23 118.5 7.7 85 26-130 37-122 (136)
68 1x5e_A Thioredoxin domain cont 99.8 9E-19 3.1E-23 114.6 9.1 99 4-131 8-107 (126)
69 1zma_A Bacterocin transport ac 99.8 1.7E-19 5.9E-24 116.9 5.5 90 26-130 28-117 (118)
70 2l57_A Uncharacterized protein 99.8 6.2E-19 2.1E-23 115.3 7.9 87 25-130 24-113 (126)
71 3ga4_A Dolichyl-diphosphooligo 99.8 5.6E-19 1.9E-23 123.4 8.0 113 4-131 19-150 (178)
72 2es7_A Q8ZP25_salty, putative 99.8 8.9E-20 3E-24 123.2 3.8 96 7-129 21-120 (142)
73 1v98_A Thioredoxin; oxidoreduc 99.8 1.4E-18 4.8E-23 115.8 9.3 87 26-130 50-138 (140)
74 1a0r_P Phosducin, MEKA, PP33; 99.8 2.7E-18 9.2E-23 125.4 11.1 87 26-131 132-223 (245)
75 2dj3_A Protein disulfide-isome 99.8 1.4E-19 4.9E-24 119.2 3.9 87 26-130 24-114 (133)
76 3cxg_A Putative thioredoxin; m 99.8 9.9E-19 3.4E-23 116.1 7.8 83 26-130 39-125 (133)
77 2djj_A PDI, protein disulfide- 99.8 4.8E-19 1.6E-23 114.8 6.1 98 6-131 10-114 (121)
78 3apq_A DNAJ homolog subfamily 99.8 8.2E-19 2.8E-23 124.5 7.7 86 26-130 113-198 (210)
79 3dml_A Putative uncharacterize 99.7 1.6E-18 5.5E-23 113.3 6.4 78 26-118 17-96 (116)
80 2dj0_A Thioredoxin-related tra 99.7 8.9E-19 3E-23 116.5 5.1 92 4-117 8-106 (137)
81 2trc_P Phosducin, MEKA, PP33; 99.7 2E-17 6.7E-22 118.8 11.6 87 26-131 119-210 (217)
82 3idv_A Protein disulfide-isome 99.7 3.9E-18 1.3E-22 122.2 7.8 99 5-130 17-118 (241)
83 2r2j_A Thioredoxin domain-cont 99.7 5.5E-18 1.9E-22 130.1 8.8 103 2-130 4-113 (382)
84 3iv4_A Putative oxidoreductase 99.7 1.1E-17 3.6E-22 108.6 8.3 102 9-130 10-112 (112)
85 3ed3_A Protein disulfide-isome 99.7 1.1E-17 3.7E-22 125.1 9.5 106 3-131 17-139 (298)
86 2yj7_A LPBCA thioredoxin; oxid 99.6 2.4E-19 8.1E-24 112.9 0.0 86 26-130 18-103 (106)
87 3f9u_A Putative exported cytoc 99.7 3.9E-18 1.3E-22 117.2 6.0 110 8-129 31-161 (172)
88 1fo5_A Thioredoxin; disulfide 99.7 2.3E-17 7.9E-22 100.4 8.0 80 28-130 3-82 (85)
89 1z6n_A Hypothetical protein PA 99.7 1.4E-17 4.9E-22 115.2 7.5 75 26-118 53-131 (167)
90 2ju5_A Thioredoxin disulfide i 99.7 1.2E-17 4.1E-22 113.4 6.8 95 26-129 46-147 (154)
91 3f8u_A Protein disulfide-isome 99.7 2.2E-17 7.5E-22 129.6 9.1 104 4-130 2-105 (481)
92 2fwh_A Thiol:disulfide interch 99.7 1.3E-17 4.5E-22 110.5 6.7 89 26-130 30-124 (134)
93 2kuc_A Putative disulphide-iso 99.7 7.3E-18 2.5E-22 110.5 5.3 105 6-130 9-117 (130)
94 1wmj_A Thioredoxin H-type; str 99.7 9.4E-19 3.2E-23 114.6 0.9 87 26-130 35-122 (130)
95 3q6o_A Sulfhydryl oxidase 1; p 99.7 2.1E-17 7.1E-22 119.6 7.9 84 6-110 15-101 (244)
96 3idv_A Protein disulfide-isome 99.7 3.1E-17 1.1E-21 117.5 7.7 100 5-131 132-234 (241)
97 2b5e_A Protein disulfide-isome 99.7 5E-17 1.7E-21 128.4 9.2 101 4-130 15-118 (504)
98 1nho_A Probable thioredoxin; b 99.7 2.7E-17 9.2E-22 100.1 5.0 79 29-130 3-81 (85)
99 1a8l_A Protein disulfide oxido 99.7 8.4E-17 2.9E-21 114.6 8.2 86 26-130 132-222 (226)
100 3ph9_A Anterior gradient prote 99.7 5.1E-17 1.7E-21 110.8 6.6 87 11-117 31-120 (151)
101 2djk_A PDI, protein disulfide- 99.7 1.4E-16 4.9E-21 105.7 8.5 98 7-130 10-111 (133)
102 2lst_A Thioredoxin; structural 99.5 3.3E-18 1.1E-22 112.3 0.0 78 25-117 17-101 (130)
103 1sen_A Thioredoxin-like protei 99.7 2.8E-17 9.4E-22 112.9 3.5 88 11-117 33-123 (164)
104 3f8u_A Protein disulfide-isome 99.7 4.2E-16 1.4E-20 122.3 10.2 96 9-130 358-457 (481)
105 2b5x_A YKUV protein, TRXY; thi 99.7 5.4E-16 1.8E-20 102.7 9.3 97 26-130 28-145 (148)
106 3apo_A DNAJ homolog subfamily 99.6 4.5E-16 1.5E-20 128.5 10.0 100 5-130 118-217 (780)
107 1sji_A Calsequestrin 2, calseq 99.6 2.2E-16 7.7E-21 119.7 6.8 99 5-131 13-119 (350)
108 3erw_A Sporulation thiol-disul 99.6 9.2E-16 3.1E-20 101.3 8.9 95 26-130 33-145 (145)
109 3uem_A Protein disulfide-isome 99.6 1.7E-15 5.7E-20 114.9 11.1 98 7-131 253-354 (361)
110 3us3_A Calsequestrin-1; calciu 99.6 5.3E-16 1.8E-20 118.7 8.1 100 4-130 14-120 (367)
111 3fkf_A Thiol-disulfide oxidore 99.6 4.2E-16 1.4E-20 103.4 6.6 97 26-131 32-147 (148)
112 3lor_A Thiol-disulfide isomera 99.6 5.7E-15 2E-19 99.4 11.6 97 26-130 29-155 (160)
113 1zzo_A RV1677; thioredoxin fol 99.6 2E-15 6.8E-20 98.5 8.6 82 26-117 24-120 (136)
114 1lu4_A Soluble secreted antige 99.6 1.5E-15 5.1E-20 99.3 8.0 93 26-130 23-132 (136)
115 1ilo_A Conserved hypothetical 99.6 7E-16 2.4E-20 92.4 5.6 75 30-129 2-76 (77)
116 3kcm_A Thioredoxin family prot 99.6 2E-15 7E-20 101.0 8.4 97 26-130 27-139 (154)
117 3t58_A Sulfhydryl oxidase 1; o 99.6 7.5E-16 2.6E-20 122.9 7.2 102 5-129 14-122 (519)
118 2f9s_A Thiol-disulfide oxidore 99.6 1.5E-15 5.3E-20 101.5 7.6 96 26-129 25-137 (151)
119 3eur_A Uncharacterized protein 99.6 1.5E-15 5.3E-20 100.8 7.3 93 26-131 30-142 (142)
120 3hdc_A Thioredoxin family prot 99.6 2.6E-15 8.8E-20 101.5 8.4 96 26-129 40-147 (158)
121 3raz_A Thioredoxin-related pro 99.6 2.3E-15 8E-20 100.9 8.1 94 26-129 23-135 (151)
122 3gl3_A Putative thiol:disulfid 99.6 2.2E-15 7.5E-20 100.7 7.9 97 26-130 27-138 (152)
123 3eyt_A Uncharacterized protein 99.6 5E-15 1.7E-19 99.6 9.7 97 26-130 27-152 (158)
124 2b5e_A Protein disulfide-isome 99.6 1.6E-15 5.5E-20 119.7 8.3 97 7-130 362-463 (504)
125 2lrn_A Thiol:disulfide interch 99.6 1.7E-15 5.8E-20 101.7 7.2 96 26-130 28-141 (152)
126 3hcz_A Possible thiol-disulfid 99.6 1.8E-15 6.1E-20 100.3 6.9 84 26-117 30-131 (148)
127 4evm_A Thioredoxin family prot 99.6 4.3E-15 1.5E-19 96.7 8.6 95 26-130 21-135 (138)
128 2h30_A Thioredoxin, peptide me 99.6 3.4E-15 1.1E-19 100.9 8.0 95 26-130 37-152 (164)
129 3or5_A Thiol:disulfide interch 99.6 3.5E-15 1.2E-19 100.8 7.4 97 26-130 33-151 (165)
130 2lja_A Putative thiol-disulfid 99.6 5E-15 1.7E-19 98.9 8.0 84 26-117 29-128 (152)
131 4fo5_A Thioredoxin-like protei 99.6 9.8E-15 3.4E-19 97.0 9.0 92 26-130 31-141 (143)
132 3ira_A Conserved protein; meth 99.6 6.2E-16 2.1E-20 107.6 2.7 71 26-113 38-120 (173)
133 3apo_A DNAJ homolog subfamily 99.6 1.1E-15 3.8E-20 126.2 4.6 89 25-130 673-763 (780)
134 1i5g_A Tryparedoxin II; electr 99.6 3.1E-15 1.1E-19 99.4 5.4 82 26-115 27-127 (144)
135 3qcp_A QSOX from trypanosoma b 99.6 1.3E-15 4.5E-20 119.9 3.7 84 4-109 24-115 (470)
136 2qc7_A ERP31, ERP28, endoplasm 99.6 8E-15 2.7E-19 106.7 7.2 101 4-131 6-116 (240)
137 3ewl_A Uncharacterized conserv 99.5 9.1E-15 3.1E-19 96.7 6.6 93 26-131 26-138 (142)
138 3ha9_A Uncharacterized thiored 99.5 1.8E-14 6E-19 97.8 8.1 93 26-130 36-160 (165)
139 3s9f_A Tryparedoxin; thioredox 99.5 8.5E-15 2.9E-19 100.2 6.4 82 26-115 47-147 (165)
140 2l5o_A Putative thioredoxin; s 99.5 2E-14 6.8E-19 96.1 8.1 95 26-130 27-141 (153)
141 1o73_A Tryparedoxin; electron 99.5 8.4E-15 2.9E-19 97.1 6.1 82 26-115 27-127 (144)
142 2ywm_A Glutaredoxin-like prote 99.5 6.3E-15 2.2E-19 105.2 5.9 82 26-130 134-216 (229)
143 1jfu_A Thiol:disulfide interch 99.5 1E-14 3.5E-19 100.9 6.7 85 26-118 59-164 (186)
144 3ia1_A THIO-disulfide isomeras 99.5 1.2E-14 4E-19 97.4 6.8 91 28-130 31-140 (154)
145 1a8l_A Protein disulfide oxido 99.5 2.3E-14 8E-19 101.8 8.7 74 26-117 21-98 (226)
146 1o8x_A Tryparedoxin, TRYX, TXN 99.5 9.9E-15 3.4E-19 97.3 6.3 83 26-116 27-128 (146)
147 3fw2_A Thiol-disulfide oxidore 99.5 1.5E-14 5.2E-19 96.8 7.1 96 26-130 32-148 (150)
148 2c0g_A ERP29 homolog, windbeut 99.5 1.9E-14 6.5E-19 105.2 8.1 100 3-130 16-128 (248)
149 3kp8_A Vkorc1/thioredoxin doma 99.5 3E-15 1E-19 96.1 3.1 79 27-130 12-91 (106)
150 2lrt_A Uncharacterized protein 99.5 1.5E-14 5.1E-19 97.5 6.3 95 26-129 34-144 (152)
151 1kng_A Thiol:disulfide interch 99.5 5.7E-14 2E-18 94.0 8.6 82 26-117 41-137 (156)
152 2lus_A Thioredoxion; CR-Trp16, 99.3 1.4E-15 4.9E-20 100.5 0.0 81 26-114 24-125 (143)
153 2fgx_A Putative thioredoxin; N 99.5 1.4E-14 4.7E-19 93.4 4.2 78 29-130 30-107 (107)
154 3lwa_A Secreted thiol-disulfid 99.5 3.3E-14 1.1E-18 98.2 6.3 97 26-130 58-181 (183)
155 2b1k_A Thiol:disulfide interch 99.5 3.6E-14 1.2E-18 96.5 6.4 79 26-117 50-145 (168)
156 1ttz_A Conserved hypothetical 99.5 2.3E-14 7.7E-19 89.1 4.7 72 31-131 3-74 (87)
157 2hls_A Protein disulfide oxido 99.5 5.8E-14 2E-18 101.9 7.4 82 26-130 137-222 (243)
158 2cvb_A Probable thiol-disulfid 99.5 1.7E-13 5.7E-18 94.9 8.8 80 26-113 32-132 (188)
159 2hyx_A Protein DIPZ; thioredox 99.5 1E-13 3.4E-18 105.9 8.1 96 26-129 81-198 (352)
160 3cmi_A Peroxiredoxin HYR1; thi 99.5 2.9E-13 1E-17 92.6 9.3 97 26-131 31-169 (171)
161 3kh7_A Thiol:disulfide interch 99.5 1.8E-13 6.2E-18 94.4 7.8 81 26-117 57-152 (176)
162 2ywi_A Hypothetical conserved 99.4 2.2E-13 7.6E-18 94.7 7.8 80 26-113 44-146 (196)
163 3drn_A Peroxiredoxin, bacterio 99.4 1.4E-13 4.8E-18 93.4 6.4 83 26-116 27-129 (161)
164 2ywm_A Glutaredoxin-like prote 99.4 1.4E-13 4.8E-18 98.1 6.4 80 26-117 19-100 (229)
165 2k6v_A Putative cytochrome C o 99.4 5.6E-13 1.9E-17 90.5 9.0 97 26-130 34-169 (172)
166 3u5r_E Uncharacterized protein 99.4 5E-13 1.7E-17 95.2 8.0 80 26-113 57-159 (218)
167 3dwv_A Glutathione peroxidase- 99.4 5.4E-13 1.8E-17 92.8 7.8 97 26-130 45-183 (187)
168 2dlx_A UBX domain-containing p 99.4 1.4E-13 4.7E-18 93.9 4.4 88 11-116 29-121 (153)
169 2e7p_A Glutaredoxin; thioredox 99.4 6.1E-14 2.1E-18 90.2 2.0 85 27-130 19-104 (116)
170 2ggt_A SCO1 protein homolog, m 99.4 6.5E-13 2.2E-17 89.5 6.2 97 26-130 22-161 (164)
171 2vup_A Glutathione peroxidase- 99.4 6E-13 2E-17 92.7 6.0 97 26-130 47-185 (190)
172 2ls5_A Uncharacterized protein 99.1 4.1E-14 1.4E-18 95.4 0.0 84 26-117 32-134 (159)
173 2rli_A SCO2 protein homolog, m 99.4 8.4E-13 2.9E-17 89.7 6.3 97 26-130 25-164 (171)
174 1xvw_A Hypothetical protein RV 99.4 1.4E-12 4.7E-17 87.9 7.0 84 26-117 34-141 (160)
175 2p5q_A Glutathione peroxidase 99.4 7.3E-13 2.5E-17 89.8 5.6 98 26-131 31-169 (170)
176 2v1m_A Glutathione peroxidase; 99.3 2.9E-12 9.8E-17 86.7 7.7 98 26-131 30-168 (169)
177 1hyu_A AHPF, alkyl hydroperoxi 99.3 5E-12 1.7E-16 100.5 9.5 81 26-130 116-196 (521)
178 2f8a_A Glutathione peroxidase 99.3 5.5E-12 1.9E-16 89.5 8.5 43 26-76 46-89 (208)
179 3kij_A Probable glutathione pe 99.3 2.3E-12 7.8E-17 89.0 6.1 44 26-77 37-81 (180)
180 1zof_A Alkyl hydroperoxide-red 99.3 1.7E-12 5.9E-17 90.8 5.5 84 26-117 32-142 (198)
181 1we0_A Alkyl hydroperoxide red 99.3 1.6E-12 5.5E-17 90.1 5.1 84 26-117 30-138 (187)
182 2bmx_A Alkyl hydroperoxidase C 99.3 2.2E-12 7.5E-17 90.2 5.7 84 26-117 44-151 (195)
183 3gkn_A Bacterioferritin comigr 99.3 2.4E-12 8.3E-17 87.0 5.4 84 26-117 34-144 (163)
184 2k8s_A Thioredoxin; dimer, str 99.3 9.7E-13 3.3E-17 79.7 2.8 63 31-111 4-66 (80)
185 1xvq_A Thiol peroxidase; thior 99.3 2.7E-12 9.2E-17 88.4 5.2 81 26-116 43-147 (175)
186 2p31_A CL683, glutathione pero 99.3 1.1E-11 3.8E-16 85.6 8.2 95 26-130 48-177 (181)
187 2jsy_A Probable thiol peroxida 99.3 1.7E-11 5.9E-16 83.2 8.7 83 26-117 43-147 (167)
188 2hls_A Protein disulfide oxido 99.3 1E-11 3.6E-16 90.0 7.4 78 18-117 18-102 (243)
189 3uem_A Protein disulfide-isome 99.3 7.3E-12 2.5E-16 94.8 6.8 90 26-130 134-226 (361)
190 1wjk_A C330018D20RIK protein; 99.2 6E-12 2E-16 79.7 4.6 79 26-130 14-92 (100)
191 2h01_A 2-Cys peroxiredoxin; th 99.2 1.4E-11 4.6E-16 85.8 6.0 84 26-117 30-140 (192)
192 2obi_A PHGPX, GPX-4, phospholi 99.2 9.1E-12 3.1E-16 86.0 5.0 43 26-76 46-89 (183)
193 1qmv_A Human thioredoxin perox 99.2 2E-11 6.8E-16 85.4 6.6 84 26-117 33-144 (197)
194 1uul_A Tryparedoxin peroxidase 99.2 1.8E-11 6E-16 86.0 6.3 84 26-117 35-146 (202)
195 3kp9_A Vkorc1/thioredoxin doma 99.2 9.3E-12 3.2E-16 92.8 5.1 75 31-130 201-276 (291)
196 1ego_A Glutaredoxin; electron 99.2 8.3E-12 2.8E-16 75.8 3.8 66 31-112 3-70 (85)
197 1xzo_A BSSCO, hypothetical pro 99.2 3E-11 1E-15 82.1 6.5 98 26-131 32-173 (174)
198 1zye_A Thioredoxin-dependent p 99.2 2.9E-11 1E-15 86.3 6.3 84 26-117 55-166 (220)
199 3ztl_A Thioredoxin peroxidase; 99.2 4.7E-11 1.6E-15 85.3 7.2 84 26-117 68-179 (222)
200 2gs3_A PHGPX, GPX-4, phospholi 99.2 2.4E-11 8.1E-16 84.2 5.4 44 26-77 48-92 (185)
201 1q98_A Thiol peroxidase, TPX; 99.2 2.2E-11 7.4E-16 83.0 4.6 83 26-117 42-149 (165)
202 2i81_A 2-Cys peroxiredoxin; st 99.2 6.2E-11 2.1E-15 84.3 6.6 84 26-117 51-161 (213)
203 2a4v_A Peroxiredoxin DOT5; yea 99.1 4.8E-11 1.6E-15 80.5 4.9 79 27-117 35-136 (159)
204 2b7k_A SCO1 protein; metalloch 99.1 1.2E-10 4E-15 81.8 6.8 97 26-130 40-179 (200)
205 3zrd_A Thiol peroxidase; oxido 99.1 5.3E-11 1.8E-15 83.9 5.0 83 26-117 77-184 (200)
206 1psq_A Probable thiol peroxida 99.1 4.4E-11 1.5E-15 81.2 4.0 83 26-117 41-145 (163)
207 3ixr_A Bacterioferritin comigr 99.1 1.2E-10 4.1E-15 80.4 5.9 84 26-117 50-160 (179)
208 4g2e_A Peroxiredoxin; redox pr 99.1 1.8E-11 6.2E-16 83.0 1.1 97 26-130 29-154 (157)
209 2c0d_A Thioredoxin peroxidase 99.1 1.4E-10 4.9E-15 83.0 5.3 83 26-116 55-164 (221)
210 3p7x_A Probable thiol peroxida 99.1 6.9E-11 2.4E-15 80.4 3.3 81 26-117 45-148 (166)
211 2pn8_A Peroxiredoxin-4; thiore 99.1 2.8E-10 9.6E-15 80.8 6.2 84 26-117 47-158 (211)
212 3gyk_A 27KDA outer membrane pr 99.0 3.4E-10 1.2E-14 77.4 5.6 42 26-76 21-62 (175)
213 2yzh_A Probable thiol peroxida 99.0 7.2E-10 2.5E-14 75.6 7.2 81 26-116 46-151 (171)
214 2i3y_A Epididymal secretory gl 99.0 1E-09 3.4E-14 78.4 8.1 43 26-77 55-98 (215)
215 1n8j_A AHPC, alkyl hydroperoxi 99.0 3.9E-10 1.3E-14 78.3 5.9 84 26-117 29-137 (186)
216 1h75_A Glutaredoxin-like prote 99.0 1.9E-10 6.7E-15 69.2 3.3 73 31-131 3-75 (81)
217 4gqc_A Thiol peroxidase, perox 99.0 1.9E-11 6.4E-16 83.7 -1.8 84 26-117 32-140 (164)
218 1nm3_A Protein HI0572; hybrid, 99.0 9.1E-10 3.1E-14 79.2 6.8 84 26-117 32-143 (241)
219 1kte_A Thioltransferase; redox 99.0 1.9E-10 6.5E-15 72.6 2.8 85 31-130 14-99 (105)
220 1tp9_A Peroxiredoxin, PRX D (t 99.0 5.4E-10 1.8E-14 75.9 5.1 84 26-117 34-146 (162)
221 1eej_A Thiol:disulfide interch 99.0 4E-10 1.4E-14 80.2 4.5 39 26-75 85-123 (216)
222 2wfc_A Peroxiredoxin 5, PRDX5; 99.0 2.2E-09 7.4E-14 73.6 7.9 84 26-117 30-142 (167)
223 3qpm_A Peroxiredoxin; oxidored 99.0 8.8E-10 3E-14 79.8 5.6 84 26-116 76-186 (240)
224 3hd5_A Thiol:disulfide interch 98.9 4.8E-09 1.7E-13 72.9 9.2 43 26-76 24-66 (195)
225 2r37_A Glutathione peroxidase 98.9 2.3E-09 7.9E-14 76.0 7.2 42 26-76 37-79 (207)
226 1r7h_A NRDH-redoxin; thioredox 98.9 1.1E-09 3.9E-14 64.6 4.6 73 31-131 3-75 (75)
227 2hze_A Glutaredoxin-1; thiored 98.9 1.4E-10 4.9E-15 74.7 0.6 85 31-130 21-106 (114)
228 3me7_A Putative uncharacterize 98.9 1.5E-09 5E-14 74.3 5.3 96 26-130 27-158 (170)
229 3h93_A Thiol:disulfide interch 98.9 3.4E-09 1.2E-13 73.6 6.5 43 26-76 24-66 (192)
230 1t3b_A Thiol:disulfide interch 98.9 1.5E-09 5E-14 77.1 4.6 88 26-130 85-207 (211)
231 3uma_A Hypothetical peroxiredo 98.9 3.1E-09 1E-13 74.1 5.4 84 26-117 55-167 (184)
232 1v58_A Thiol:disulfide interch 98.9 6.4E-09 2.2E-13 75.2 7.2 93 26-131 96-230 (241)
233 2cq9_A GLRX2 protein, glutared 98.8 2.2E-09 7.4E-14 70.8 4.0 64 32-113 30-93 (130)
234 2yan_A Glutaredoxin-3; oxidore 98.8 1.2E-09 4.1E-14 69.3 2.0 55 45-112 30-84 (105)
235 3tjj_A Peroxiredoxin-4; thiore 98.8 3.3E-09 1.1E-13 77.5 4.3 83 26-116 90-200 (254)
236 3a2v_A Probable peroxiredoxin; 98.8 8E-09 2.7E-13 75.4 5.4 84 26-117 32-143 (249)
237 2ht9_A Glutaredoxin-2; thiored 98.8 3.2E-09 1.1E-13 71.6 3.0 60 32-112 52-114 (146)
238 3mng_A Peroxiredoxin-5, mitoch 98.7 8.6E-09 2.9E-13 71.2 4.8 84 26-117 42-156 (173)
239 4hde_A SCO1/SENC family lipopr 98.7 1.1E-07 3.8E-12 65.0 10.1 44 26-77 31-78 (170)
240 2v2g_A Peroxiredoxin 6; oxidor 98.7 1.4E-08 4.9E-13 73.2 5.3 82 27-116 28-145 (233)
241 2pwj_A Mitochondrial peroxired 98.7 8.5E-09 2.9E-13 70.8 3.7 84 26-117 42-154 (171)
242 4f9z_D Endoplasmic reticulum r 98.7 6.2E-08 2.1E-12 69.1 8.3 78 45-130 141-221 (227)
243 3c1r_A Glutaredoxin-1; oxidize 98.7 5.6E-09 1.9E-13 67.7 1.9 85 31-130 27-113 (118)
244 2klx_A Glutaredoxin; thioredox 98.6 2.6E-09 8.9E-14 65.5 -0.3 57 31-110 8-65 (89)
245 3rhb_A ATGRXC5, glutaredoxin-C 98.6 1.8E-08 6E-13 64.5 3.3 97 12-130 7-104 (113)
246 1prx_A HORF6; peroxiredoxin, h 98.6 5.8E-08 2E-12 69.5 6.2 80 29-116 34-149 (224)
247 3qmx_A Glutaredoxin A, glutare 98.6 1.6E-08 5.5E-13 63.7 2.4 63 29-112 16-79 (99)
248 1un2_A DSBA, thiol-disulfide i 98.6 2.5E-08 8.5E-13 70.2 3.1 45 26-78 112-159 (197)
249 1xcc_A 1-Cys peroxiredoxin; un 98.6 5.1E-08 1.8E-12 69.6 4.3 83 26-116 29-146 (220)
250 3ic4_A Glutaredoxin (GRX-1); s 98.5 3.8E-08 1.3E-12 60.4 3.0 78 31-130 14-91 (92)
251 1fov_A Glutaredoxin 3, GRX3; a 98.5 1E-07 3.5E-12 57.0 3.5 60 31-111 3-62 (82)
252 2khp_A Glutaredoxin; thioredox 98.5 5.2E-08 1.8E-12 59.8 1.9 60 31-111 8-67 (92)
253 4dvc_A Thiol:disulfide interch 98.5 5.1E-07 1.8E-11 61.5 7.0 43 26-76 20-62 (184)
254 2l4c_A Endoplasmic reticulum r 98.4 7.5E-07 2.6E-11 58.3 6.5 93 10-131 26-121 (124)
255 3keb_A Probable thiol peroxida 98.4 3E-07 1E-11 66.1 4.5 78 26-116 47-155 (224)
256 3h8q_A Thioredoxin reductase 3 98.3 2.1E-07 7.2E-12 59.8 2.8 82 31-130 19-101 (114)
257 3nzn_A Glutaredoxin; structura 98.3 6.7E-07 2.3E-11 56.2 5.1 80 29-130 22-102 (103)
258 3hz8_A Thiol:disulfide interch 98.3 1.2E-06 3.9E-11 61.1 6.2 43 26-76 23-65 (193)
259 2lqo_A Putative glutaredoxin R 98.3 3.7E-07 1.3E-11 56.8 2.8 60 31-110 6-66 (92)
260 3ctg_A Glutaredoxin-2; reduced 98.3 1.8E-07 6E-12 61.6 1.0 67 31-112 39-106 (129)
261 3msz_A Glutaredoxin 1; alpha-b 98.2 3.2E-07 1.1E-11 55.5 1.4 61 31-111 6-72 (89)
262 3gv1_A Disulfide interchange p 98.2 2.6E-06 8.9E-11 57.2 5.8 75 26-117 13-124 (147)
263 3l9v_A Putative thiol-disulfid 98.2 1.1E-06 3.9E-11 61.0 3.6 44 26-77 13-59 (189)
264 1wik_A Thioredoxin-like protei 98.2 2.7E-07 9.1E-12 58.8 0.0 67 29-112 16-82 (109)
265 4eo3_A Bacterioferritin comigr 97.9 1.6E-05 5.3E-10 59.8 6.2 81 26-116 23-120 (322)
266 4f82_A Thioredoxin reductase; 97.9 3.8E-05 1.3E-09 53.1 7.6 84 26-117 46-158 (176)
267 4f9z_D Endoplasmic reticulum r 97.9 1E-05 3.5E-10 57.5 4.4 81 26-131 26-109 (227)
268 2ec4_A FAS-associated factor 1 97.9 1.6E-05 5.5E-10 55.0 5.3 83 24-117 52-153 (178)
269 2wci_A Glutaredoxin-4; redox-a 97.9 2.5E-06 8.6E-11 56.6 1.2 66 29-111 36-101 (135)
270 3zyw_A Glutaredoxin-3; metal b 97.9 5.4E-06 1.9E-10 53.0 2.1 54 45-111 29-82 (111)
271 2znm_A Thiol:disulfide interch 97.8 1.9E-05 6.5E-10 54.4 4.4 43 26-76 21-63 (195)
272 3feu_A Putative lipoprotein; a 97.8 8.9E-06 3E-10 56.3 2.7 40 27-76 22-61 (185)
273 1nm3_A Protein HI0572; hybrid, 97.8 5.8E-05 2E-09 53.8 6.7 77 11-110 153-229 (241)
274 1z6m_A Conserved hypothetical 97.7 4.9E-05 1.7E-09 51.4 5.6 43 26-76 26-70 (175)
275 1sji_A Calsequestrin 2, calseq 97.7 7.1E-05 2.4E-09 56.3 6.9 87 28-131 246-343 (350)
276 2rem_A Disulfide oxidoreductas 97.7 6.6E-05 2.3E-09 51.5 6.1 42 26-75 24-65 (193)
277 3l9s_A Thiol:disulfide interch 97.7 2.8E-05 9.7E-10 54.0 4.0 43 26-76 20-65 (191)
278 3ipz_A Monothiol glutaredoxin- 97.7 8.3E-06 2.8E-10 51.9 1.0 55 45-112 31-85 (109)
279 3l4n_A Monothiol glutaredoxin- 97.6 5.2E-06 1.8E-10 54.5 -0.5 62 31-110 16-80 (127)
280 2ct6_A SH3 domain-binding glut 97.6 2E-05 6.7E-10 50.3 2.0 55 45-112 16-84 (111)
281 2wem_A Glutaredoxin-related pr 97.6 2.6E-05 8.9E-10 50.5 2.5 79 13-112 9-88 (118)
282 3gx8_A Monothiol glutaredoxin- 97.6 2.4E-05 8.1E-10 50.8 2.0 57 45-111 29-85 (121)
283 3bj5_A Protein disulfide-isome 97.6 0.00031 1.1E-08 46.9 7.4 74 50-130 47-123 (147)
284 1aba_A Glutaredoxin; electron 97.5 4.9E-05 1.7E-09 46.0 2.4 52 46-109 13-74 (87)
285 1t1v_A SH3BGRL3, SH3 domain-bi 97.5 2.1E-05 7.1E-10 48.4 0.5 55 45-112 10-72 (93)
286 3us3_A Calsequestrin-1; calciu 97.4 0.00065 2.2E-08 51.5 8.5 90 28-130 248-344 (367)
287 3sbc_A Peroxiredoxin TSA1; alp 97.3 0.00021 7.2E-09 50.9 4.1 44 26-77 51-96 (216)
288 2r2j_A Thioredoxin domain-cont 97.2 0.00085 2.9E-08 51.0 6.9 87 26-130 235-325 (382)
289 2axo_A Hypothetical protein AT 97.2 0.001 3.4E-08 48.9 6.7 69 30-109 44-123 (270)
290 1xiy_A Peroxiredoxin, pfaop; a 97.1 0.0014 4.9E-08 45.2 6.4 84 26-116 42-153 (182)
291 3c7m_A Thiol:disulfide interch 97.1 0.0011 3.7E-08 45.2 5.5 42 27-76 17-59 (195)
292 2h8l_A Protein disulfide-isome 97.0 0.0017 5.8E-08 46.6 6.4 92 10-131 11-110 (252)
293 3kzq_A Putative uncharacterize 97.0 0.01 3.6E-07 41.1 10.1 36 32-74 5-40 (208)
294 3ec3_A Protein disulfide-isome 96.9 0.00095 3.2E-08 47.9 4.4 94 10-131 11-112 (250)
295 2wul_A Glutaredoxin related pr 96.6 0.0012 4.1E-08 42.6 2.5 73 45-130 33-107 (118)
296 3tue_A Tryparedoxin peroxidase 96.4 0.0015 5.1E-08 46.5 2.3 44 26-77 55-100 (219)
297 3gha_A Disulfide bond formatio 96.2 0.011 3.6E-07 41.2 5.8 43 26-76 28-73 (202)
298 2jad_A Yellow fluorescent prot 96.1 0.00047 1.6E-08 52.6 -1.8 66 31-111 263-329 (362)
299 1u6t_A SH3 domain-binding glut 96.1 0.0021 7E-08 41.7 1.5 29 45-79 8-42 (121)
300 3gn3_A Putative protein-disulf 96.0 0.0086 2.9E-07 41.1 4.5 43 26-76 13-56 (182)
301 2h8l_A Protein disulfide-isome 95.8 0.014 4.9E-07 41.6 5.3 47 52-107 150-203 (252)
302 3ed3_A Protein disulfide-isome 95.6 0.093 3.2E-06 38.5 8.9 74 53-130 175-263 (298)
303 3ec3_A Protein disulfide-isome 95.5 0.11 3.9E-06 36.9 9.0 87 26-130 131-224 (250)
304 3f4s_A Alpha-DSBA1, putative u 95.5 0.022 7.7E-07 40.3 5.2 42 27-76 39-83 (226)
305 3q6o_A Sulfhydryl oxidase 1; p 95.4 0.049 1.7E-06 38.4 6.7 40 90-130 197-236 (244)
306 3gmf_A Protein-disulfide isome 95.3 0.051 1.7E-06 37.9 6.3 42 26-75 14-58 (205)
307 3bci_A Disulfide bond protein 94.9 0.07 2.4E-06 36.0 6.1 42 27-76 11-55 (186)
308 2xhf_A Peroxiredoxin 5; oxidor 94.5 0.023 8E-07 38.7 2.8 85 26-117 41-152 (171)
309 2in3_A Hypothetical protein; D 94.2 0.037 1.3E-06 38.2 3.4 28 91-118 169-196 (216)
310 2x8g_A Thioredoxin glutathione 93.8 0.031 1E-06 44.7 2.7 61 31-112 20-83 (598)
311 1z3e_A Regulatory protein SPX; 93.8 0.086 3E-06 34.1 4.4 28 45-78 9-36 (132)
312 3l78_A Regulatory protein SPX; 93.7 0.08 2.7E-06 33.8 4.0 29 45-79 8-36 (120)
313 1t4y_A Adaptive-response senso 93.4 0.49 1.7E-05 29.6 7.0 71 46-128 21-93 (105)
314 3t58_A Sulfhydryl oxidase 1; o 93.1 0.32 1.1E-05 38.6 7.3 79 26-130 156-236 (519)
315 3fz4_A Putative arsenate reduc 92.9 0.19 6.5E-06 32.0 4.8 29 45-79 11-39 (120)
316 3tdg_A DSBG, putative uncharac 92.7 0.1 3.5E-06 38.3 3.7 37 27-73 147-183 (273)
317 2kok_A Arsenate reductase; bru 92.7 0.16 5.5E-06 32.2 4.3 26 45-76 13-38 (120)
318 1rw1_A Conserved hypothetical 92.4 0.11 3.7E-06 32.8 3.1 27 45-77 8-34 (114)
319 3gkx_A Putative ARSC family re 91.2 0.22 7.7E-06 31.7 3.7 29 45-79 12-40 (120)
320 1z6m_A Conserved hypothetical 89.1 0.22 7.6E-06 33.0 2.4 34 90-130 141-174 (175)
321 3bci_A Disulfide bond protein 87.8 0.36 1.2E-05 32.4 2.8 34 90-130 141-174 (186)
322 1s3c_A Arsenate reductase; ARS 87.4 0.34 1.2E-05 31.8 2.4 28 45-78 10-37 (141)
323 2in3_A Hypothetical protein; D 87.0 1.2 4E-05 30.4 5.2 38 31-75 9-46 (216)
324 2g2q_A Glutaredoxin-2; thiored 87.0 1.6 5.5E-05 27.9 5.2 38 28-77 2-39 (124)
325 3feu_A Putative lipoprotein; a 86.8 0.26 8.8E-06 33.4 1.6 38 90-129 144-183 (185)
326 3l9s_A Thiol:disulfide interch 86.2 0.37 1.3E-05 32.9 2.1 20 90-111 143-162 (191)
327 3f0i_A Arsenate reductase; str 86.1 0.45 1.6E-05 30.2 2.4 27 45-77 12-38 (119)
328 3rdw_A Putative arsenate reduc 85.9 0.37 1.3E-05 30.7 1.9 28 45-78 13-40 (121)
329 2znm_A Thiol:disulfide interch 85.4 0.35 1.2E-05 32.5 1.7 18 90-109 142-159 (195)
330 3hz8_A Thiol:disulfide interch 84.8 0.41 1.4E-05 32.5 1.9 19 90-110 146-164 (193)
331 2rem_A Disulfide oxidoreductas 83.7 0.42 1.4E-05 32.0 1.5 18 90-109 147-164 (193)
332 1wwj_A Circadian clock protein 83.1 1.4 4.9E-05 27.5 3.6 64 27-107 6-70 (105)
333 3gha_A Disulfide bond formatio 82.6 0.75 2.6E-05 31.6 2.5 18 90-109 155-172 (202)
334 3fz5_A Possible 2-hydroxychrom 81.8 1 3.5E-05 30.8 2.9 34 91-131 166-199 (202)
335 2imf_A HCCA isomerase, 2-hydro 81.6 0.84 2.9E-05 31.1 2.4 27 32-65 3-29 (203)
336 3c7m_A Thiol:disulfide interch 81.2 0.55 1.9E-05 31.4 1.3 18 90-109 154-171 (195)
337 3gn3_A Putative protein-disulf 79.7 0.56 1.9E-05 31.9 0.9 36 90-129 146-181 (182)
338 3gmf_A Protein-disulfide isome 77.8 0.98 3.4E-05 31.2 1.8 21 92-117 162-182 (205)
339 3fy7_A Chloride intracellular 76.3 7 0.00024 27.2 6.0 66 29-109 25-90 (250)
340 2imf_A HCCA isomerase, 2-hydro 75.6 2.7 9.1E-05 28.5 3.5 23 91-118 160-182 (203)
341 1r4w_A Glutathione S-transfera 73.4 3 0.0001 28.8 3.3 37 91-130 175-211 (226)
342 3l9v_A Putative thiol-disulfid 72.1 0.9 3.1E-05 30.7 0.3 18 90-109 137-154 (189)
343 3gl5_A Putative DSBA oxidoredu 71.6 2.7 9.4E-05 29.5 2.8 23 91-117 176-198 (239)
344 3rpp_A Glutathione S-transfera 70.7 2.5 8.5E-05 29.6 2.4 37 91-130 175-211 (234)
345 1r4w_A Glutathione S-transfera 65.9 5.9 0.0002 27.3 3.5 29 30-65 6-34 (226)
346 4f03_A Glutathione transferase 65.8 5.2 0.00018 27.4 3.2 32 40-75 15-46 (253)
347 3p04_A Uncharacterized BCR; SE 65.1 2.8 9.6E-05 25.2 1.5 35 2-37 4-38 (87)
348 4hoj_A REGF protein; GST, glut 64.4 4 0.00014 27.4 2.4 52 45-110 10-61 (210)
349 2r4v_A XAP121, chloride intrac 62.4 15 0.00051 25.4 5.1 54 42-109 25-78 (247)
350 3vhs_A ATPase wrnip1; zinc fin 54.4 0.95 3.2E-05 20.9 -1.5 11 46-56 8-18 (29)
351 4g9p_A 4-hydroxy-3-methylbut-2 52.5 22 0.00076 27.4 4.8 39 92-130 354-399 (406)
352 2a2p_A Selenoprotein M, SELM p 50.6 15 0.00051 23.7 3.1 33 98-131 55-88 (129)
353 2ahe_A Chloride intracellular 48.0 24 0.00084 24.7 4.3 31 42-76 30-60 (267)
354 3ced_A Methionine import ATP-b 41.2 49 0.0017 19.7 4.4 54 11-77 4-57 (98)
355 1k0m_A CLIC1, NCC27, chloride 40.9 55 0.0019 22.3 5.2 54 42-109 19-72 (241)
356 3fz5_A Possible 2-hydroxychrom 38.4 24 0.00084 23.6 2.9 34 32-72 7-40 (202)
357 3fhk_A UPF0403 protein YPHP; d 35.0 94 0.0032 20.3 10.2 65 46-117 55-125 (147)
358 3rpp_A Glutathione S-transfera 33.2 34 0.0012 23.6 3.1 30 29-65 5-34 (234)
359 2yv7_A CG10997-PA, LD46306P, C 31.6 1.3E+02 0.0044 20.9 8.2 32 45-76 38-69 (260)
360 3lno_A Putative uncharacterize 29.1 97 0.0033 18.7 4.4 37 45-82 55-92 (108)
361 4glt_A Glutathione S-transfera 28.8 1E+02 0.0036 20.5 4.9 52 45-109 29-80 (225)
362 3vk8_A Probable formamidopyrim 28.0 9.1 0.00031 28.1 -0.7 10 45-54 280-289 (295)
363 3lyk_A Stringent starvation pr 27.7 1E+02 0.0036 20.2 4.7 52 45-110 13-64 (216)
364 1uwd_A Hypothetical protein TM 27.5 1E+02 0.0034 18.3 4.5 37 45-82 53-89 (103)
365 1ee8_A MUTM (FPG) protein; bet 26.9 7.8 0.00027 28.0 -1.2 8 46-53 257-264 (266)
366 2jvx_A NF-kappa-B essential mo 26.9 5.1 0.00017 18.8 -1.5 18 46-63 5-22 (28)
367 3cq1_A Putative uncharacterize 26.6 84 0.0029 18.7 3.7 37 45-82 52-88 (103)
368 3noy_A 4-hydroxy-3-methylbut-2 26.4 38 0.0013 25.7 2.4 27 92-118 320-347 (366)
369 1hyu_A AHPF, alkyl hydroperoxi 25.0 2.4E+02 0.0081 21.7 10.2 63 27-117 18-81 (521)
370 3gl5_A Putative DSBA oxidoredu 24.9 1E+02 0.0036 21.2 4.4 37 30-73 3-41 (239)
371 1gnw_A Glutathione S-transfera 24.0 1.4E+02 0.0047 19.3 4.7 27 45-75 9-35 (211)
372 4dej_A Glutathione S-transfera 23.9 1.1E+02 0.0037 20.6 4.3 28 45-76 19-46 (231)
373 3u6p_A Formamidopyrimidine-DNA 23.9 12 0.0004 27.1 -0.8 6 46-51 267-272 (273)
374 2l9z_A PR domain zinc finger p 23.2 9.6 0.00033 19.3 -1.0 9 46-54 13-21 (39)
375 3p1v_A Metallo-endopeptidase; 23.0 59 0.002 25.0 2.9 17 45-61 389-405 (407)
376 3q18_A GSTO-2, glutathione S-t 22.5 1.4E+02 0.0048 19.9 4.6 29 45-77 30-58 (239)
377 1k82_A Formamidopyrimidine-DNA 22.3 13 0.00045 26.8 -0.8 6 46-51 262-267 (268)
378 2xzf_A Formamidopyrimidine-DNA 22.1 14 0.00046 26.7 -0.8 7 46-52 264-270 (271)
379 1k3x_A Endonuclease VIII; hydr 21.1 14 0.00049 26.4 -0.8 6 46-51 256-261 (262)
380 3twl_A Formamidopyrimidine-DNA 20.9 14 0.0005 27.2 -0.8 17 44-60 269-285 (310)
381 3mjh_B Early endosome antigen 20.8 8.9 0.0003 18.8 -1.4 18 46-63 7-24 (34)
382 4id0_A Glutathione S-transfera 20.5 1.8E+02 0.0062 18.8 6.1 28 45-76 9-36 (214)
No 1
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.91 E-value=3.6e-24 Score=137.89 Aligned_cols=99 Identities=19% Similarity=0.329 Sum_probs=81.8
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+.+++.+.+.+ .++++++|+|||+ ||++|+.+.|.++++++.++ ++.|+.||+++.+ +
T Consensus 5 i~~~~~f~~~l~~--~~~k~vvv~F~a~--------wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~---~------ 64 (105)
T 3zzx_A 5 VKDQEDFTKQLNE--AGNKLVVIDFYAT--------WCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECE---D------ 64 (105)
T ss_dssp CCSHHHHHHHHHH--TTTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCH---H------
T ss_pred eCCHHHHHHHHHh--cCCCEEEEEEECC--------CCCCccCCCcchhhhhhccC-CeEEEEEecccCH---H------
Confidence 4455555332333 2578999999998 99999999999999999887 7999999998866 3
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|+++||+++|++|+.+.++.|. +.+.|.++|+.
T Consensus 65 l~~~~~V~~~PT~~~~~~G~~v~~~~G~---~~~~l~~~i~k 103 (105)
T 3zzx_A 65 IAQDNQIACMPTFLFMKNGQKLDSLSGA---NYDKLLELVEK 103 (105)
T ss_dssp HHHHTTCCBSSEEEEEETTEEEEEEESC---CHHHHHHHHHH
T ss_pred HHHHcCCCeecEEEEEECCEEEEEEeCc---CHHHHHHHHHh
Confidence 7889999999999999999999999995 45678888763
No 2
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.90 E-value=1.3e-23 Score=138.06 Aligned_cols=114 Identities=31% Similarity=0.641 Sum_probs=89.5
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+.+++.+ .+.. .++++++|+|||+.+ .+|++|||+|+.+.|.++++++++++++.|+.||++....|++....
T Consensus 9 ~~~~~~~~~-~~~~-~~~~~v~v~F~a~~~-~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~-- 83 (123)
T 1wou_A 9 VSGFEEFHR-AVEQ-HNGKTIFAYFTGSKD-AGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNND-- 83 (123)
T ss_dssp EESHHHHHH-HHHT-TTTSEEEEEEECCBC-TTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCH--
T ss_pred eccHHHHHH-HHHH-hCCCEEEEEEEccCC-CCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHH--
Confidence 345555533 3331 148999999999987 89999999999999999999999977899999999755555443332
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|+++||+++|++| .++.|......+.|++||++
T Consensus 84 ~~~~~~i~~~Pt~~~~~~~---~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTAVPTLLKYGTP---QKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCSSSEEEETTSS---CEEEGGGGGCHHHHHHHHHC
T ss_pred HHHHCCCCeeCEEEEEcCC---ceEeccccCCHHHHHHHHhc
Confidence 4467999999999999886 56667666678889999986
No 3
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.89 E-value=6.7e-23 Score=140.20 Aligned_cols=89 Identities=15% Similarity=0.236 Sum_probs=75.1
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+-+++-+.+++ .++++++|+|||+ |||||+.+.|+|+++++++++.+.|++||+|+.+ +
T Consensus 26 l~t~~~f~~~v~~--~~~k~VVVdF~A~--------WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~---e------ 86 (160)
T 2av4_A 26 LNSGWAVDQAIVN--EDERLVCIRFGHD--------YDPDCMKMDELLYKVADDIKNFCVIYLVDITEVP---D------ 86 (160)
T ss_dssp CCSHHHHHHHHHH--CSSSEEEEEEECT--------TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC---T------
T ss_pred cCCHHHHHHHHHh--cCCCEEEEEEECC--------CChhHHHHHHHHHHHHHHccCCcEEEEEECCCCH---H------
Confidence 4455555333432 3678999999998 9999999999999999999878999999999977 3
Q ss_pred ccccccccccceEEEEeCCeEe--E-------EecCc
Q 032841 90 VNSRFKLTGVPTLFRWENDIVS--G-------RLEDH 117 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~--~-------~~~~~ 117 (132)
++.+|+|+++||+++|++|+.+ . ++.|.
T Consensus 87 ~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa 123 (160)
T 2av4_A 87 FNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWP 123 (160)
T ss_dssp TTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSC
T ss_pred HHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEee
Confidence 7889999999999999999987 5 78886
No 4
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.89 E-value=8.5e-24 Score=142.50 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=81.0
Q ss_pred ccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCC--ChhHHhhhHHHHHHHHhCCCC-cEEEEEEeCCCcCccCC
Q 032841 8 ATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSW--CPDCVRAEPVIYKTLEASPDD-IALLQAYVGDRPTWRNP 84 (132)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pW--C~~C~~~~p~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 84 (132)
++..+|++.+. ++++++|+|||+ | |++|+.+.|++++++++++++ +.|++||+|+++ +
T Consensus 22 ~t~~~F~~~v~-------~~~~vlVdF~a~--------~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~---~- 82 (140)
T 2qgv_A 22 VSESRLDDWLT-------QAPDGVVLLSSD--------PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE---A- 82 (140)
T ss_dssp CCHHHHHHHHH-------TCSSEEEEECCC--------TTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHH---H-
T ss_pred CCHHHHHHHHh-------CCCCEEEEEeCC--------cccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCH---H-
Confidence 44456666532 567899999998 8 999999999999999999878 999999999876 3
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcch--hcHHHHHHhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEA--HLEHKIKALL 129 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~--~~~~~l~~~l 129 (132)
++.+|+|+++||+++|++|+.++++.|... ...+.|++++
T Consensus 83 -----lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 83 -----IGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp -----HHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -----HHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 888999999999999999999999999732 3344555544
No 5
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.88 E-value=4.8e-23 Score=138.35 Aligned_cols=100 Identities=16% Similarity=0.229 Sum_probs=82.9
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCC--hhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWC--PDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC--~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
..+..+|++.+. .++++++|+|||+ || ++|+.+.|+++++++++.+++.|++||+|+++ +
T Consensus 19 ~vt~~~F~~~v~------~~~~~vlVdF~A~--------wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~---~- 80 (137)
T 2qsi_A 19 LVDEATVDDFIA------HSGKIVVLFFRGD--------AVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAER---G- 80 (137)
T ss_dssp EECTTTHHHHHH------TSSSEEEEEECCC--------TTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHH---H-
T ss_pred ccCHhHHHHHHh------cCCCcEEEEEeCC--------ccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCH---H-
Confidence 345668887643 2445999999998 99 99999999999999999889999999999876 3
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcch--hcHHHHHHhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEA--HLEHKIKALL 129 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~--~~~~~l~~~l 129 (132)
++.+|+|+++||+++|++|+.++++.|... ...+.|++++
T Consensus 81 -----la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 81 -----LMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp -----HHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -----HHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 888999999999999999999999999743 3344454444
No 6
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.86 E-value=3.2e-21 Score=126.63 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=73.8
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEe
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWE 106 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~ 106 (132)
+++++|+|||+ ||++|+.+.|.+++++++++ ++.|++||+++. +.+|+|+++||+++|+
T Consensus 23 ~~~vvv~F~a~--------wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~------------~~~~~v~~~PT~~~fk 81 (118)
T 3evi_A 23 DVWVIIHLYRS--------SIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC------------IQHYHDNCLPTIFVYK 81 (118)
T ss_dssp TCEEEEEEECT--------TSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT------------STTCCGGGCSEEEEEE
T ss_pred CCeEEEEEeCC--------CChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh------------HHHCCCCCCCEEEEEE
Confidence 44999999997 99999999999999999997 699999999763 2589999999999999
Q ss_pred CCeEeEEecCcc-----hhcHHHHHHhhhc
Q 032841 107 NDIVSGRLEDHE-----AHLEHKIKALLSA 131 (132)
Q Consensus 107 ~g~~~~~~~~~~-----~~~~~~l~~~l~~ 131 (132)
+|+.+.++.|.. ....+.|+.+|..
T Consensus 82 ~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 82 NGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp TTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999999874 3567888888763
No 7
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.85 E-value=3.1e-21 Score=122.84 Aligned_cols=86 Identities=12% Similarity=0.147 Sum_probs=67.6
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFR 104 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~ 104 (132)
.++++++|+|||+ ||++|+.+.|.+++++++++ ++.++.||++..+ + ++.+|+|+++||+++
T Consensus 16 ~~~~~vlv~f~a~--------wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~ 77 (105)
T 4euy_A 16 EEQQLVLLFIKTE--------NCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQ---E------IAGRYAVFTGPTVLL 77 (105)
T ss_dssp TCSSEEEEEEEES--------SCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEEEE
T ss_pred hcCCCEEEEEeCC--------CCcchHHHHHHHHHHHHHcC-CceEEEEECCCCH---H------HHHhcCCCCCCEEEE
Confidence 3789999999998 99999999999999999985 7999999998865 2 678999999999999
Q ss_pred EeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 105 WENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+++|+.+.++.|.. ..+.|.++|+
T Consensus 78 ~~~G~~~~~~~g~~--~~~~l~~~l~ 101 (105)
T 4euy_A 78 FYNGKEILRESRFI--SLENLERTIQ 101 (105)
T ss_dssp EETTEEEEEEESSC--CHHHHHHHHH
T ss_pred EeCCeEEEEEeCCc--CHHHHHHHHH
Confidence 99999999988863 3445666665
No 8
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.85 E-value=4.4e-21 Score=124.54 Aligned_cols=84 Identities=20% Similarity=0.346 Sum_probs=73.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++++ +.|+.||++... + ++.+|+|.++||++++
T Consensus 30 ~~k~vlv~F~a~--------wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~~ 91 (116)
T 3qfa_C 30 GDKLVVVDFSAT--------WCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---D------VASECEVKSMPTFQFF 91 (116)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---H------HHHHcCCccccEEEEE
Confidence 689999999997 999999999999999999875 999999998765 2 7789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|. ..+.|+++|+
T Consensus 92 ~~G~~~~~~~G~---~~~~l~~~l~ 113 (116)
T 3qfa_C 92 KKGQKVGEFSGA---NKEKLEATIN 113 (116)
T ss_dssp SSSSEEEEEESC---CHHHHHHHHH
T ss_pred eCCeEEEEEcCC---CHHHHHHHHH
Confidence 999999998886 4556777665
No 9
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.85 E-value=5.7e-21 Score=121.94 Aligned_cols=100 Identities=16% Similarity=0.401 Sum_probs=80.1
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQ 85 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 85 (132)
..++..+|++.+ . .++++++|+|||+ ||++|+.+.|.++++.+++++++.++.+|++..+ .
T Consensus 7 ~~l~~~~~~~~~---~---~~~~~vlv~f~a~--------~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~-- 67 (111)
T 3gnj_A 7 EKLDTNTFEQLI---Y---DEGKACLVMFSRK--------NCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK---T-- 67 (111)
T ss_dssp EECCHHHHHHHH---T---TSCCCEEEEEECS--------SCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---H--
T ss_pred eecCHHHHHHHH---H---hcCCEEEEEEeCC--------CChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh---h--
Confidence 344444555542 1 2679999999997 9999999999999999999878999999998765 2
Q ss_pred CCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 86 HPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.|.++|+
T Consensus 68 ----l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~l~ 106 (111)
T 3gnj_A 68 ----LFQRFSLKGVPQILYFKDGEYKGKMAGDV--EDDEVEQMIA 106 (111)
T ss_dssp ----HHHHTTCCSSCEEEEEETTEEEEEEESSC--CHHHHHHHHH
T ss_pred ----HHHhcCCCcCCEEEEEECCEEEEEEeccC--CHHHHHHHHH
Confidence 77899999999999999999998988862 3345555554
No 10
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.85 E-value=1.3e-20 Score=124.53 Aligned_cols=105 Identities=18% Similarity=0.358 Sum_probs=83.3
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT 80 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (132)
|+-.++.++..+|++. ++ .++++++|+|||+ ||++|+.+.|.++++++++++++.|+.||++...
T Consensus 20 m~~~v~~l~~~~f~~~---~~---~~~k~vlv~F~a~--------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~- 84 (128)
T 2o8v_B 20 HSDKIIHLTDDSFDTD---VL---KADGAILVDFWAE--------WCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP- 84 (128)
T ss_dssp -CCCSEEECTTTHHHH---TT---TCSSEEEEEEECS--------SCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC-
T ss_pred cccccEecChhhHHHH---HH---hcCCEEEEEEECC--------CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH-
Confidence 3334555666666654 22 3789999999998 9999999999999999999878999999998765
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|.++||+++|++|+.+.++.|.. ..+.|.++|+
T Consensus 85 --~------l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~ 124 (128)
T 2o8v_B 85 --G------TAPKYGIRGIPTLLLFKNGEVAATKVGAL--SKGQLKEFLD 124 (128)
T ss_dssp --T------TSGGGTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred --H------HHHHcCCCccCEEEEEeCCEEEEEEcCCC--CHHHHHHHHH
Confidence 2 67799999999999999999998888863 2445666654
No 11
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.84 E-value=7.9e-21 Score=121.71 Aligned_cols=105 Identities=20% Similarity=0.380 Sum_probs=82.7
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT 80 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (132)
|+-.+..++..+|++. ++ .++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++...
T Consensus 3 m~~~v~~l~~~~~~~~---~~---~~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~- 67 (112)
T 1t00_A 3 MAGTLKHVTDDSFEQD---VL---KNDKPVLVDFWAA--------WCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP- 67 (112)
T ss_dssp SSCCCEEECTTTHHHH---TT---TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-
T ss_pred ccceEEecchhhHHHH---Hh---hCCCeEEEEEECC--------CCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH-
Confidence 4444556666666553 22 3689999999997 9999999999999999999778999999998755
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|.++||++++++|+.+.++.|... .+.+.++|+
T Consensus 68 --~------~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~--~~~l~~~l~ 107 (112)
T 1t00_A 68 --G------TAAKYGVMSIPTLNVYQGGEVAKTIVGAKP--KAAIVRDLE 107 (112)
T ss_dssp --H------HHHHTTCCSSSEEEEEETTEEEEEEESCCC--HHHHHHHTH
T ss_pred --H------HHHhCCCCcccEEEEEeCCEEEEEEeCCCC--HHHHHHHHH
Confidence 2 678999999999999999999988888632 334555443
No 12
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.84 E-value=5.4e-21 Score=122.77 Aligned_cols=84 Identities=23% Similarity=0.412 Sum_probs=74.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++.++++ ++.|+.||++... + ++.+|+|+++||++++
T Consensus 23 ~~k~vlv~f~a~--------wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 23 QDKLVVVDFYAT--------WCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELG---D------VAQKNEVSAMPTLLLF 84 (109)
T ss_dssp SSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred cCCEEEEEEECC--------cCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH---H------HHHHcCCCccCEEEEE
Confidence 789999999997 99999999999999999997 6999999998765 2 6789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. .+.|+++|+
T Consensus 85 ~~G~~~~~~~G~~---~~~l~~~i~ 106 (109)
T 3f3q_A 85 KNGKEVAKVVGAN---PAAIKQAIA 106 (109)
T ss_dssp ETTEEEEEEESSC---HHHHHHHHH
T ss_pred ECCEEEEEEeCCC---HHHHHHHHH
Confidence 9999999999873 356777765
No 13
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=1.5e-20 Score=119.33 Aligned_cols=100 Identities=20% Similarity=0.342 Sum_probs=82.1
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
+..++.++|++.+. ++++++|+||++ ||++|+.+.|.++++.+.+++++.++.+|++... +
T Consensus 6 v~~l~~~~~~~~~~-------~~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~- 66 (109)
T 3tco_A 6 TLVLTEENFDEVIR-------NNKLVLVDCWAE--------WCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ---K- 66 (109)
T ss_dssp CEECCTTTHHHHHH-------HSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---H-
T ss_pred EEEecHHHHHHHHh-------cCCeEEEEEECC--------CCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH---H-
Confidence 34556667776643 589999999997 9999999999999999999878999999998765 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++.+|+.+.++.|.. ..+.|.++|+
T Consensus 67 -----~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~l~ 105 (109)
T 3tco_A 67 -----IADKYSVLNIPTTLIFVNGQLVDSLVGAV--DEDTLESTVN 105 (109)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred -----HHHhcCcccCCEEEEEcCCcEEEeeeccC--CHHHHHHHHH
Confidence 67899999999999999999999988863 3345555554
No 14
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.84 E-value=2.4e-20 Score=120.05 Aligned_cols=99 Identities=17% Similarity=0.291 Sum_probs=81.9
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQ 85 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 85 (132)
+.++..+|++.+ ++++++|+|||+ ||++|+.+.|.++++++++++++.++.||++... +
T Consensus 4 ~~l~~~~~~~~~--------~~~~~lv~f~a~--------wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~---~-- 62 (112)
T 2voc_A 4 VKATDQSFSAET--------SEGVVLADFWAP--------WCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ---E-- 62 (112)
T ss_dssp EECCTTTHHHHH--------SSSEEEEEEECT--------TBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC---S--
T ss_pred EEecHHHHHHHh--------CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---H--
Confidence 345556776652 578999999997 9999999999999999988778999999998765 2
Q ss_pred CCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 86 HPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|+++||++++++|+.+.++.|.. ..+.|.+|++.
T Consensus 63 ----l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~~ 102 (112)
T 2voc_A 63 ----TAGKYGVMSIPTLLVLKDGEVVETSVGFK--PKEALQELVNK 102 (112)
T ss_dssp ----HHHHTTCCSBSEEEEEETTEEEEEEESCC--CHHHHHHHHHT
T ss_pred ----HHHHcCCCcccEEEEEeCCEEEEEEeCCC--CHHHHHHHHHH
Confidence 77899999999999999999999988863 34567777653
No 15
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.84 E-value=2.6e-20 Score=118.43 Aligned_cols=101 Identities=20% Similarity=0.421 Sum_probs=81.3
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
++.++..+|++. +. .++++++|+||++ ||++|+.+.|.++++++++++++.++.+|++... .
T Consensus 4 v~~l~~~~f~~~---~~---~~~~~~~v~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~- 65 (108)
T 2trx_A 4 IIHLTDDSFDTD---VL---KADGAILVDFWAE--------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---G- 65 (108)
T ss_dssp EEECCTTTHHHH---TT---TCSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT---T-
T ss_pred ceecchhhHHHH---HH---hcCCeEEEEEECC--------CCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---H-
Confidence 344555666654 22 3789999999997 9999999999999999999878999999998755 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.|.++|+
T Consensus 66 -----~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~ 104 (108)
T 2trx_A 66 -----TAPKYGIRGIPTLLLFKNGEVAATKVGAL--SKGQLKEFLD 104 (108)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred -----HHHHcCCcccCEEEEEeCCEEEEEEecCC--CHHHHHHHHH
Confidence 77899999999999999999998888863 3445666654
No 16
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.84 E-value=2.3e-20 Score=118.16 Aligned_cols=100 Identities=22% Similarity=0.419 Sum_probs=81.1
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQ 85 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 85 (132)
+.++..+|++.. .++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... .
T Consensus 3 ~~l~~~~~~~~~-------~~~~~~~v~f~~~--------~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~-- 62 (105)
T 1nsw_A 3 MTLTDANFQQAI-------QGDGPVLVDFWAA--------WCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP---E-- 62 (105)
T ss_dssp EEECTTTHHHHH-------SSSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH---H--
T ss_pred eeccHHhHHHHH-------hCCCcEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH---H--
Confidence 345555666442 2678999999997 9999999999999999999877999999998755 2
Q ss_pred CCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 86 HPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.+.++|++
T Consensus 63 ----~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~~ 102 (105)
T 1nsw_A 63 ----TTSQFGIMSIPTLILFKGGRPVKQLIGYQ--PKEQLEAQLAD 102 (105)
T ss_dssp ----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHTTT
T ss_pred ----HHHHcCCccccEEEEEeCCeEEEEEecCC--CHHHHHHHHHH
Confidence 67789999999999999999988888863 34567777653
No 17
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.84 E-value=1.8e-20 Score=120.51 Aligned_cols=99 Identities=20% Similarity=0.401 Sum_probs=80.4
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
...++..+|++.+ + ++++++|+||++ ||++|+.+.|.++++.++++ ++.++.||++... .
T Consensus 11 ~~~~~~~~f~~~~----~---~~k~vlv~f~a~--------~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~---~- 70 (112)
T 1syr_A 11 KIVTSQAEFDSII----S---QNELVIVDFFAE--------WCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVS---E- 70 (112)
T ss_dssp EEECSHHHHHHHH----H---HCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTH---H-
T ss_pred EEECCHHHHHHHH----c---cCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCH---H-
Confidence 3344444555543 2 688999999997 99999999999999999987 6999999998755 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|.++||++++++|+.+.++.|. ..+.|.++|++
T Consensus 71 -----~~~~~~v~~~Pt~~~~~~G~~~~~~~G~---~~~~l~~~l~~ 109 (112)
T 1syr_A 71 -----VTEKENITSMPTFKVYKNGSSVDTLLGA---NDSALKQLIEK 109 (112)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESC---CHHHHHHHHHT
T ss_pred -----HHHHcCCCcccEEEEEECCcEEEEEeCC---CHHHHHHHHHH
Confidence 6778999999999999999999888886 45567777753
No 18
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.83 E-value=2.2e-21 Score=126.17 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=81.9
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT 80 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (132)
||..+..++..+|++. ++ .++++++|+|||+ ||++|+.+.|.++++++++++++.|+.||++...
T Consensus 1 ~~~~v~~l~~~~f~~~---~~---~~~~~~lv~f~a~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~- 65 (122)
T 3aps_A 1 LPQASIDLTPQTFNEK---VL---QGKTHWVVDFYAP--------WCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP- 65 (122)
T ss_dssp -CCCSEECCHHHHHHH---TT---TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH-
T ss_pred CCcchhcCCHHHHHHH---Hh---cCCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH-
Confidence 5666676765555432 22 3789999999997 9999999999999999988778999999998765
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeEeEEecCc--chhcHHHHHHhhh
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDH--EAHLEHKIKALLS 130 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~--~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|+++||++++++|+.+.++.|. .....+.|.++|+
T Consensus 66 --~------~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~ 109 (122)
T 3aps_A 66 --Q------TCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIY 109 (122)
T ss_dssp --H------HHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHH
T ss_pred --H------HHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHH
Confidence 2 6778999999999999877667777764 1234445555554
No 19
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.83 E-value=4.2e-20 Score=119.72 Aligned_cols=96 Identities=19% Similarity=0.436 Sum_probs=79.9
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccc
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRV 90 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 90 (132)
.+.+.+ +.+++ ++++++|+|||+ ||++|+.+.|.++++++++++ +.++.||++... + +
T Consensus 18 ~~~~~~-~~~~~---~~k~vvv~F~a~--------wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~---~------l 75 (114)
T 2oe3_A 18 TNLTEF-RNLIK---QNDKLVIDFYAT--------WCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESP---D------I 75 (114)
T ss_dssp CSHHHH-HHHHH---HCSEEEEEEECT--------TCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCH---H------H
T ss_pred CCHHHH-HHHHh---CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---H------H
Confidence 344444 43444 688999999997 999999999999999999874 999999998755 2 6
Q ss_pred cccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+.+|+|+++||++++++|+.+.++.|.. .+.|+++|++
T Consensus 76 ~~~~~v~~~Pt~~~~~~G~~~~~~~G~~---~~~l~~~l~~ 113 (114)
T 2oe3_A 76 AKECEVTAMPTFVLGKDGQLIGKIIGAN---PTALEKGIKD 113 (114)
T ss_dssp HHHTTCCSBSEEEEEETTEEEEEEESSC---HHHHHHHHHT
T ss_pred HHHCCCCcccEEEEEeCCeEEEEEeCCC---HHHHHHHHHh
Confidence 7899999999999999999999998875 5678888764
No 20
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.83 E-value=4e-20 Score=117.81 Aligned_cols=104 Identities=16% Similarity=0.315 Sum_probs=84.9
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC---CCcEEEEEEeCC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP---DDIALLQAYVGD 77 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~---~~~~~~~v~~~~ 77 (132)
|+..++.++..+|++.+. +++++|+||++ ||++|+.+.|.++++.+++. .++.++.+|++.
T Consensus 3 ~~~~v~~l~~~~~~~~~~--------~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 66 (111)
T 3uvt_A 3 LGSTVLALTENNFDDTIA--------EGITFIKFYAP--------WCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA 66 (111)
T ss_dssp --CCSEECCTTTHHHHHH--------SSEEEEEEECS--------SCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT
T ss_pred CCCcceEcChhhHHHHhc--------CCcEEEEEECC--------CChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc
Confidence 345567777788888743 57999999998 99999999999999998864 368999999987
Q ss_pred CcCccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 78 RPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
.. + ++.+|+|+++||++++++|+.+.++.|. ...+.|.+||++
T Consensus 67 ~~---~------l~~~~~v~~~Pt~~~~~~g~~~~~~~g~--~~~~~l~~~l~~ 109 (111)
T 3uvt_A 67 ER---N------ICSKYSVRGYPTLLLFRGGKKVSEHSGG--RDLDSLHRFVLS 109 (111)
T ss_dssp CH---H------HHHHTTCCSSSEEEEEETTEEEEEECSC--CSHHHHHHHHHH
T ss_pred cH---h------HHHhcCCCcccEEEEEeCCcEEEeccCC--cCHHHHHHHHHh
Confidence 65 2 7789999999999999999999888886 345678888763
No 21
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.83 E-value=5e-20 Score=116.45 Aligned_cols=100 Identities=16% Similarity=0.361 Sum_probs=82.8
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
+..++..+|++.+ ++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... +
T Consensus 5 v~~l~~~~~~~~~--------~~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~- 64 (106)
T 3die_A 5 IVKVTDADFDSKV--------ESGVQLVDFWAT--------ACGPCKMIAPVLEELAADYEGKADILKLDVDENP---S- 64 (106)
T ss_dssp CEECCTTTHHHHS--------CSSEEEEEEECS--------BCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H-
T ss_pred eEECCHHHHHHHh--------cCCcEEEEEECC--------CCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH---H-
Confidence 3445556666652 578999999997 9999999999999999999877999999998765 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.+|+|+++||++++++|+.+.++.|.. ..+.|.++|++
T Consensus 65 -----~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~--~~~~l~~~l~~ 104 (106)
T 3die_A 65 -----TAAKYEVMSIPTLIVFKDGQPVDKVVGFQ--PKENLAEVLDK 104 (106)
T ss_dssp -----HHHHTTCCSBSEEEEEETTEEEEEEESCC--CHHHHHHHHHT
T ss_pred -----HHHhCCCcccCEEEEEeCCeEEEEEeCCC--CHHHHHHHHHH
Confidence 67899999999999999999999888863 35567777764
No 22
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.83 E-value=5.5e-20 Score=116.21 Aligned_cols=98 Identities=19% Similarity=0.324 Sum_probs=79.5
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+.+++.+ .++. .++++++|+||++ ||++|+.+.|.++++.++++ ++.++.+|+++.. +
T Consensus 5 i~~~~~~~~-~l~~-~~~~~~~v~f~~~--------~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~---~------ 64 (105)
T 3m9j_A 5 IESKTAFQE-ALDA-AGDKLVVVDFSAT--------WCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQ---D------ 64 (105)
T ss_dssp CCSHHHHHH-HHHH-TTTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCH---H------
T ss_pred cCCHHHHHH-HHHh-cCCCeEEEEEECC--------CChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhH---H------
Confidence 445555533 3332 2588999999997 99999999999999999997 5999999998765 2
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++|+|.++||++++++|+.+.++.|. ..+.|.++|+
T Consensus 65 ~~~~~~v~~~Pt~~~~~~g~~~~~~~g~---~~~~l~~~l~ 102 (105)
T 3m9j_A 65 VASESEVKSMPTFQFFKKGQKVGEFSGA---NKEKLEATIN 102 (105)
T ss_dssp HHHHTTCCBSSEEEEEETTEEEEEEESS---CHHHHHHHHH
T ss_pred HHHHcCCCcCcEEEEEECCeEEEEEeCC---CHHHHHHHHH
Confidence 6789999999999999999999999887 3556777765
No 23
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.83 E-value=3.3e-20 Score=120.60 Aligned_cols=84 Identities=21% Similarity=0.389 Sum_probs=72.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.+++++ +.|+.||++... + ++.+|+|+++||++++
T Consensus 33 ~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~~ 94 (122)
T 2vlu_A 33 AKKLVVIDFTAS--------WCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK---P------IAEQFSVEAMPTFLFM 94 (122)
T ss_dssp TTCCEEEEEECT--------TCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred cCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH---H------HHHHcCCCcccEEEEE
Confidence 688999999997 999999999999999999874 999999998755 2 6779999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. .+.|.++|+
T Consensus 95 ~~G~~~~~~~G~~---~~~l~~~l~ 116 (122)
T 2vlu_A 95 KEGDVKDRVVGAI---KEELTAKVG 116 (122)
T ss_dssp ETTEEEEEEESSC---HHHHHHHHH
T ss_pred eCCEEEEEEeCcC---HHHHHHHHH
Confidence 9999999988875 344555543
No 24
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.83 E-value=2.8e-20 Score=119.23 Aligned_cols=93 Identities=18% Similarity=0.384 Sum_probs=77.2
Q ss_pred CCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCc
Q 032841 2 PLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTW 81 (132)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~ 81 (132)
+-++..++..+|++. +. .++++++|+||++ |||+|+.+.|.++++.+.+++++.++.+|++...
T Consensus 6 ~~~v~~l~~~~~~~~---~~---~~~~~~lv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~-- 69 (115)
T 1thx_A 6 SKGVITITDAEFESE---VL---KAEQPVLVYFWAS--------WCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP-- 69 (115)
T ss_dssp CCSEEECCGGGHHHH---TT---TCSSCEEEEEECT--------TCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH--
T ss_pred cCceEEeeccchhhH---hh---cCCceEEEEEECC--------CCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH--
Confidence 334555666666554 22 3789999999997 9999999999999999999877999999998755
Q ss_pred cCCCCCccccccccccccceEEEEeCCeEeEEecCc
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~ 117 (132)
. ++.+|+|.++||++++++|+.+.++.|.
T Consensus 70 -~------~~~~~~v~~~Pt~~~~~~G~~~~~~~g~ 98 (115)
T 1thx_A 70 -T------TVKKYKVEGVPALRLVKGEQILDSTEGV 98 (115)
T ss_dssp -H------HHHHTTCCSSSEEEEEETTEEEEEEESC
T ss_pred -H------HHHHcCCCceeEEEEEcCCEEEEEecCC
Confidence 2 6789999999999999999999888886
No 25
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.83 E-value=4.8e-20 Score=117.38 Aligned_cols=84 Identities=14% Similarity=0.288 Sum_probs=72.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.+++++++++ ++.|+.+|++... + ++.+|+|+++||++++
T Consensus 20 ~~~~v~v~f~a~--------wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 20 GSRLAVVKFTMR--------GCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQ---G------TAATNNISATPTFQFF 81 (107)
T ss_dssp TTSCEEEEEECS--------SCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CChhhHHHHHHHHHHHHHCC-CcEEEEEECccCH---H------HHHhcCCCcccEEEEE
Confidence 688999999997 99999999999999999985 7999999998765 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|... + .|.++|+
T Consensus 82 ~~G~~~~~~~G~~~--~-~l~~~l~ 103 (107)
T 1gh2_A 82 RNKVRIDQYQGADA--V-GLEEKIK 103 (107)
T ss_dssp ETTEEEEEEESSCH--H-HHHHHHH
T ss_pred ECCeEEEEEeCCCH--H-HHHHHHH
Confidence 99999999988532 2 3666665
No 26
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.83 E-value=1.4e-20 Score=119.53 Aligned_cols=86 Identities=17% Similarity=0.367 Sum_probs=72.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... + ++.+|+|.++||++++
T Consensus 18 ~~~~~lv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 18 SSVPVLVDFWAP--------WCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP---N------VASEYGIRSIPTIMVF 80 (107)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H------HHHHHTCCSSCEEEEE
T ss_pred CCCcEEEEEECC--------CCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH---H------HHHHCCCCcCCEEEEE
Confidence 689999999997 9999999999999999999878999999998755 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|... .+.+.++|+
T Consensus 81 ~~G~~~~~~~G~~~--~~~l~~~l~ 103 (107)
T 1dby_A 81 KGGKKCETIIGAVP--KATIVQTVE 103 (107)
T ss_dssp SSSSEEEEEESCCC--HHHHHHHHH
T ss_pred eCCEEEEEEeCCCC--HHHHHHHHH
Confidence 99999888888632 334444443
No 27
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.83 E-value=5.6e-20 Score=116.49 Aligned_cols=100 Identities=16% Similarity=0.385 Sum_probs=81.8
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
++.++..+|++.++ ++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... .
T Consensus 3 v~~l~~~~~~~~~~-------~~~~~lv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~- 63 (109)
T 2yzu_A 3 PIEVTDQNFDETLG-------QHPLVLVDFWAE--------WCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP---K- 63 (109)
T ss_dssp CEECCTTTHHHHHH-------HCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---H-
T ss_pred ceEccHhHHHHHhc-------CCCeEEEEEECC--------CCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH---h-
Confidence 44566677776533 678999999997 9999999999999999999878999999998755 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.+.++|+
T Consensus 64 -----~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~l~ 102 (109)
T 2yzu_A 64 -----TAMRYRVMSIPTVILFKDGQPVEVLVGAQ--PKRNYQAKIE 102 (109)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred -----HHHhCCCCcCCEEEEEeCCcEeeeEeCCC--CHHHHHHHHH
Confidence 67799999999999999999988888763 3445666654
No 28
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.83 E-value=4.6e-20 Score=124.07 Aligned_cols=101 Identities=19% Similarity=0.431 Sum_probs=81.5
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRN 83 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 83 (132)
.++.++..+|++.+ ..+++++|+|||+ ||++|+.+.|.++++++++.+++.|+.||++... +
T Consensus 39 ~v~~l~~~~~~~~~-------~~~k~vlv~F~a~--------wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~---~ 100 (148)
T 3p2a_A 39 EVINATAETLDKLL-------QDDLPMVIDFWAP--------WCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP---A 100 (148)
T ss_dssp CCEECCTTTHHHHT-------TCSSCEEEEEECS--------SCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H
T ss_pred CceecCHHHHHHHH-------hcCCcEEEEEECC--------CCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH---H
Confidence 34455555665542 3789999999998 9999999999999999999778999999998765 2
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||+++|++|+.+.++.|.. ..+.|.+||+
T Consensus 101 ------l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~ 139 (148)
T 3p2a_A 101 ------LSTRFRIRSIPTIMLYRNGKMIDMLNGAV--PKAPFDNWLD 139 (148)
T ss_dssp ------HHHHTTCCSSSEEEEEETTEEEEEESSCC--CHHHHHHHHH
T ss_pred ------HHHHCCCCccCEEEEEECCeEEEEEeCCC--CHHHHHHHHH
Confidence 67899999999999999999999988862 2344555543
No 29
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.83 E-value=1.5e-19 Score=121.63 Aligned_cols=72 Identities=18% Similarity=0.303 Sum_probs=64.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++.+++.|+.||+++.. + ++.+|+|+++||+++|
T Consensus 22 ~~k~vlv~F~a~--------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~------~~~~~~i~~~Pt~~~~ 84 (142)
T 1qgv_A 22 EDRVVVIRFGHD--------WDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP---D------FNKMYELYDPCTVMFF 84 (142)
T ss_dssp SSSEEEEEEECT--------TSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC---T------TTTSSCSCSSCEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCH---H------HHHHcCCCCCCEEEEE
Confidence 589999999998 9999999999999999988768999999998765 3 6789999999999999
Q ss_pred eCCeEeEEe
Q 032841 106 ENDIVSGRL 114 (132)
Q Consensus 106 ~~g~~~~~~ 114 (132)
++|+.+.+.
T Consensus 85 ~~G~~v~~~ 93 (142)
T 1qgv_A 85 FRNKHIMID 93 (142)
T ss_dssp ETTEEEEEE
T ss_pred ECCcEEEEe
Confidence 999987643
No 30
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.83 E-value=2.9e-20 Score=118.92 Aligned_cols=84 Identities=21% Similarity=0.393 Sum_probs=72.4
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEe
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWE 106 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~ 106 (132)
+++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... . ++.+|+|.++||+++++
T Consensus 24 ~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~~~ 86 (112)
T 1ep7_A 24 HKPIVVDFTAT--------WCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA---A------VAEAAGITAMPTFHVYK 86 (112)
T ss_dssp TCCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH---H------HHHHHTCCBSSEEEEEE
T ss_pred CCeEEEEEECC--------CCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH---H------HHHHcCCCcccEEEEEE
Confidence 78999999997 9999999999999999998878999999998755 2 67789999999999999
Q ss_pred CCeEeEEecCcchhcHHHHHHhhh
Q 032841 107 NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+|+.+.++.|. ..+.|.++|+
T Consensus 87 ~G~~~~~~~G~---~~~~l~~~l~ 107 (112)
T 1ep7_A 87 DGVKADDLVGA---SQDKLKALVA 107 (112)
T ss_dssp TTEEEEEEESC---CHHHHHHHHH
T ss_pred CCeEEEEEcCC---CHHHHHHHHH
Confidence 99999888886 2344555554
No 31
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=1.1e-20 Score=124.11 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=82.4
Q ss_pred CccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC-----CCCcEEEEEEeCC
Q 032841 3 LNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS-----PDDIALLQAYVGD 77 (132)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~-----~~~~~~~~v~~~~ 77 (132)
..++.++..+|++.+. +++++++|+|||+ ||++|+.+.|.++++++.+ .+++.++.||++.
T Consensus 15 ~~v~~l~~~~f~~~~~------~~~~~vlv~F~a~--------wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~ 80 (127)
T 3h79_A 15 SRVVELTDETFDSIVM------DPEKDVFVLYYVP--------WSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK 80 (127)
T ss_dssp CCCEECCTTTHHHHHT------CTTCEEEEEEECT--------TCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT
T ss_pred CceEECChhhHHHHHh------CCCCCEEEEEECC--------ccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc
Confidence 3456677778887632 3689999999997 9999999999999997643 3569999999987
Q ss_pred CcCccCCCCCccccccccccccceEEEEeCCeEe--EEecCcchhcHHHHHHhhhc
Q 032841 78 RPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVS--GRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~--~~~~~~~~~~~~~l~~~l~~ 131 (132)
.. + ++.+|+|+++||+++|++|+.. .++.|. ...+.|.+||++
T Consensus 81 ~~---~------l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~--~~~~~l~~~i~~ 125 (127)
T 3h79_A 81 YP---D------VIERMRVSGFPTMRYYTRIDKQEPFEYSGQ--RYLSLVDSFVFQ 125 (127)
T ss_dssp CH---H------HHHHTTCCSSSEEEEECSSCSSSCEECCSC--CCHHHHHHHHHH
T ss_pred cH---h------HHHhcCCccCCEEEEEeCCCCCCceEecCC--ccHHHHHHHHHh
Confidence 65 3 7789999999999999988764 355554 456788888864
No 32
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.82 E-value=5.7e-20 Score=120.73 Aligned_cols=84 Identities=14% Similarity=0.357 Sum_probs=72.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.++++ ++.|+.||++... . ++.+|+|.++||++++
T Consensus 37 ~~k~vvv~f~a~--------wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~~ 98 (124)
T 1xfl_A 37 SKTLVVVDFTAS--------WCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK---S------VASDWAIQAMPTFMFL 98 (124)
T ss_dssp TTCEEEEEEECT--------TCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH---H------HHHHTTCCSSSEEEEE
T ss_pred cCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH---H------HHHHcCCCccCEEEEE
Confidence 689999999997 99999999999999999987 7999999998755 2 6789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|. ..+.|.++|+
T Consensus 99 ~~G~~~~~~~G~---~~~~l~~~l~ 120 (124)
T 1xfl_A 99 KEGKILDKVVGA---KKDELQSTIA 120 (124)
T ss_dssp ETTEEEEEEESC---CHHHHHHHHH
T ss_pred ECCEEEEEEeCC---CHHHHHHHHH
Confidence 999999998885 3445666654
No 33
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.82 E-value=4.2e-20 Score=125.29 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=67.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++++.+.++.||+++.. + ++.+|+|.++||++++
T Consensus 22 ~~k~vlv~F~a~--------WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 22 AEKVLVLRFGRD--------EDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTA---V------YTQYFDISYIPSTVFF 84 (149)
T ss_dssp CSSEEEEEEECT--------TSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCC---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHccCceEEEEEECCcCH---H------HHHHcCCCccCeEEEE
Confidence 689999999998 9999999999999999999877999999998765 2 7789999999999999
Q ss_pred eCCeEe---------EEecC
Q 032841 106 ENDIVS---------GRLED 116 (132)
Q Consensus 106 ~~g~~~---------~~~~~ 116 (132)
++|+.+ .++.|
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G 104 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVG 104 (149)
T ss_dssp ETTEEEEEECSSSCCSCEES
T ss_pred ECCeEEEeecCCCCCCeEee
Confidence 999998 78888
No 34
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.82 E-value=3e-20 Score=126.75 Aligned_cols=87 Identities=15% Similarity=0.355 Sum_probs=73.9
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFR 104 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~ 104 (132)
.++++++|+|||+ ||++|+.+.|.++++++++.+++.|+.||++... + ++.+|+|+++||+++
T Consensus 62 ~~~~~vlv~F~a~--------wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~---~------l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 62 RDDLPLLVDFWAP--------WCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHP---A------VAGRHRIQGIPAFIL 124 (155)
T ss_dssp TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTST---H------HHHHTTCCSSSEEEE
T ss_pred hCCCcEEEEEECC--------CCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccH---H------HHHHcCCCcCCEEEE
Confidence 3789999999997 9999999999999999998778999999998765 2 778999999999999
Q ss_pred EeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 105 WENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
|++|+.+.++.|.. ..+.|.+||+
T Consensus 125 ~~~G~~~~~~~G~~--~~~~l~~~l~ 148 (155)
T 2ppt_A 125 FHKGRELARAAGAR--PASELVGFVR 148 (155)
T ss_dssp EETTEEEEEEESCC--CHHHHHHHHH
T ss_pred EeCCeEEEEecCCC--CHHHHHHHHH
Confidence 99999999998863 2344555544
No 35
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.82 E-value=5.6e-20 Score=117.78 Aligned_cols=100 Identities=15% Similarity=0.285 Sum_probs=79.8
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC-CCcCccC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG-DRPTWRN 83 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 83 (132)
++.++..+|++.+. . ..+++++|+|||+ ||++|+.+.|.+++++++++ ++.++.+|++ ... +
T Consensus 7 v~~l~~~~~~~~~~---~--~~~~~vlv~f~a~--------wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~---~ 69 (111)
T 2pu9_C 7 VTEVNKDTFWPIVK---A--AGDKPVVLDMFTQ--------WCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQENK---T 69 (111)
T ss_dssp EEEECTTTHHHHHT---T--CTTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTH---H
T ss_pred cEEechHHHHHHHH---h--cCCCEEEEEEECC--------cCHhHHHHCHHHHHHHHHCC-CeEEEEEecCcchH---H
Confidence 44555566666532 1 2578999999997 99999999999999999987 6999999997 333 2
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||++++++|+.+.++.|.. .+.|.++|+
T Consensus 70 ------~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~---~~~l~~~l~ 107 (111)
T 2pu9_C 70 ------LAKELGIRVVPTFKILKENSVVGEVTGAK---YDKLLEAIQ 107 (111)
T ss_dssp ------HHHHHCCSBSSEEEEESSSSEEEEEESSC---HHHHHHHHH
T ss_pred ------HHHHcCCCeeeEEEEEeCCcEEEEEcCCC---HHHHHHHHH
Confidence 67889999999999999999999988873 455666665
No 36
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.82 E-value=5.4e-20 Score=118.22 Aligned_cols=102 Identities=21% Similarity=0.302 Sum_probs=80.1
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT 80 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~ 80 (132)
|..-....+..+| +. + .++++++|+|||+ ||++|+.+.|.++++.+.++ ++.++.+|++...
T Consensus 1 M~~~~~~~~~~~f-~~---~----~~~~~~vv~f~a~--------wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~- 62 (110)
T 2l6c_A 1 MSAIRDITTEAGM-AH---F----EGLSDAIVFFHKN--------LCPHCKNMEKVLDKFGARAP-QVAISSVDSEARP- 62 (110)
T ss_dssp CCCCSBCGGGCSH-HH---H----TTCSEEEEEEECS--------SCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCH-
T ss_pred CcceeecCCHHHH-HH---H----HcCCCEEEEEECC--------CCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCH-
Confidence 3333444555666 32 2 2578999999997 99999999999999998886 7999999997755
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|+++||++++++|+.+.++.|.. ..+.|+++|+
T Consensus 63 --~------l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~--~~~~l~~~~~ 102 (110)
T 2l6c_A 63 --E------LMKELGFERVPTLVFIRDGKVAKVFSGIM--NPRELQALYA 102 (110)
T ss_dssp --H------HHHHTTCCSSCEEEEEESSSEEEEEESCC--CHHHHHHHHH
T ss_pred --H------HHHHcCCcccCEEEEEECCEEEEEEcCCC--CHHHHHHHHH
Confidence 2 67789999999999999999999999862 3445666654
No 37
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.82 E-value=6.3e-20 Score=115.82 Aligned_cols=100 Identities=17% Similarity=0.354 Sum_probs=80.0
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQ 85 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 85 (132)
.+.+..+|++.+ . .++++++|+||++ ||++|+.+.|.++++++++++++.++.+|++... +
T Consensus 3 ~~~~~~~~~~~~---~---~~~~~~~v~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~-- 63 (105)
T 1fb6_A 3 QDVNDSSWKEFV---L---ESEVPVMVDFWAP--------WCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP---G-- 63 (105)
T ss_dssp EECCTTTHHHHT---T---TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H--
T ss_pred eechhhhHHHHH---h---cCCCcEEEEEECC--------CChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH---H--
Confidence 344555666642 2 3688999999997 9999999999999999999877999999998755 2
Q ss_pred CCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 86 HPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.+.++|+
T Consensus 64 ----~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~--~~~~l~~~l~ 102 (105)
T 1fb6_A 64 ----IATQYNIRSIPTVLFFKNGERKESIIGAV--PKSTLTDSIE 102 (105)
T ss_dssp ----HHHHTTCCSSSEEEEEETTEEEEEEEECC--CHHHHHHHHH
T ss_pred ----HHHhCCCCcccEEEEEeCCeEEEEEecCC--CHHHHHHHHH
Confidence 67789999999999999999988888763 3445656554
No 38
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.82 E-value=4.4e-20 Score=123.42 Aligned_cols=75 Identities=15% Similarity=0.258 Sum_probs=69.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.+.++++++++++.|+.||++... + ++.+|+|+++||+++|
T Consensus 23 ~~~~vlv~F~a~--------wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 85 (140)
T 3hz4_A 23 SKKPVVVMFYSP--------ACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP---W------TAEKYGVQGTPTFKFF 85 (140)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH---H------HHHHHTCCEESEEEEE
T ss_pred CCCcEEEEEECC--------CChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH---h------HHHHCCCCcCCEEEEE
Confidence 689999999997 9999999999999999999877999999998765 2 7789999999999999
Q ss_pred eCCeEeEEecCc
Q 032841 106 ENDIVSGRLEDH 117 (132)
Q Consensus 106 ~~g~~~~~~~~~ 117 (132)
++|+.+.++.|.
T Consensus 86 ~~G~~~~~~~G~ 97 (140)
T 3hz4_A 86 CHGRPVWEQVGQ 97 (140)
T ss_dssp ETTEEEEEEESS
T ss_pred eCCcEEEEEcCC
Confidence 999999999887
No 39
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.82 E-value=6.8e-20 Score=117.44 Aligned_cols=86 Identities=14% Similarity=0.333 Sum_probs=69.5
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcCccCCCCCccccccccccccceEE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLF 103 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~ 103 (132)
..+++++|+|||+ ||++|+.+.|.++++++++. .++.++.+|++... + ++.+|+|.++||++
T Consensus 19 ~~~~~~~v~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 19 AGDKLIVLYFHTS--------WAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS---E------ISELFEISAVPYFI 81 (112)
T ss_dssp TTTCCEEEEEECC--------C--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH---H------HHHHTTCCSSSEEE
T ss_pred cCCCEEEEEEECC--------CCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH---H------HHHHcCCCcccEEE
Confidence 3589999999998 99999999999999998842 47999999998755 2 67789999999999
Q ss_pred EEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 104 RWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++|+.+.++.|... +.|.++|+
T Consensus 82 ~~~~G~~~~~~~G~~~---~~l~~~l~ 105 (112)
T 3d6i_A 82 IIHKGTILKELSGADP---KEYVSLLE 105 (112)
T ss_dssp EEETTEEEEEECSCCH---HHHHHHHH
T ss_pred EEECCEEEEEecCCCH---HHHHHHHH
Confidence 9999999999988732 12555543
No 40
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.82 E-value=1.5e-20 Score=124.12 Aligned_cols=91 Identities=16% Similarity=0.333 Sum_probs=74.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHH--HHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccc---cccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIY--KTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKL---TGVP 100 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v---~~vP 100 (132)
++++++|+|||+ ||++|+.+.|.+. ++.+.+.+++.++.||++......+ ++.+|+| .++|
T Consensus 28 ~~k~vlv~f~a~--------wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~------l~~~~~v~~~~~~P 93 (133)
T 3fk8_A 28 THKPTLLVFGAN--------WCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLE------LSQAYGDPIQDGIP 93 (133)
T ss_dssp HTCCEEEEEECT--------TCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHH------HHHHTTCGGGGCSS
T ss_pred cCCcEEEEEcCC--------CCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHH------HHHHhCCccCCccc
Confidence 789999999998 9999999999999 8888876679999999943221112 7789999 9999
Q ss_pred eEEEE-eCCeEeEEecCcc-----hhcHHHHHHhhh
Q 032841 101 TLFRW-ENDIVSGRLEDHE-----AHLEHKIKALLS 130 (132)
Q Consensus 101 t~~~~-~~g~~~~~~~~~~-----~~~~~~l~~~l~ 130 (132)
|++++ .+|+.+.+..|.. ....+.+++||+
T Consensus 94 t~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~ 129 (133)
T 3fk8_A 94 AVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFA 129 (133)
T ss_dssp EEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHH
T ss_pred eEEEECCCCCEEEEecCCcccccccCCHHHHHHHHH
Confidence 99999 5798888887732 456777888875
No 41
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.82 E-value=7.5e-20 Score=115.84 Aligned_cols=102 Identities=18% Similarity=0.323 Sum_probs=82.4
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
++.++..+|++.+ . .++++++|+||++ ||++|+.+.|.++++.+++++++.++.+|++... .
T Consensus 4 v~~l~~~~~~~~~---~---~~~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~- 65 (107)
T 2i4a_A 4 TLAVSDSSFDQDV---L---KASGLVLVDFWAE--------WCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP---E- 65 (107)
T ss_dssp EEECCTTTHHHHT---T---TCSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC---H-
T ss_pred eeecchhhhhHHH---H---hCCCEEEEEEECC--------CChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH---H-
Confidence 4455556666542 2 3789999999997 9999999999999999988778999999998755 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++++|+|.++||++++.+|+.+.++.|.. ..+.|.++|++
T Consensus 66 -----~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~~ 105 (107)
T 2i4a_A 66 -----TPNAYQVRSIPTLMLVRDGKVIDKKVGAL--PKSQLKAWVES 105 (107)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHHH
T ss_pred -----HHHhcCCCccCEEEEEeCCEEEEEecCCC--CHHHHHHHHHh
Confidence 67789999999999999999998888763 35567777653
No 42
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.82 E-value=5.8e-20 Score=119.52 Aligned_cols=86 Identities=19% Similarity=0.408 Sum_probs=73.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.+++.+++.++.||++... + ++.+|+|.++||++++
T Consensus 30 ~~k~vlv~f~a~--------~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~~ 92 (119)
T 1w4v_A 30 SETPVVVDFHAQ--------WCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT---D------LAIEYEVSAVPTVLAM 92 (119)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCcEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH---H------HHHHcCCCcccEEEEE
Confidence 688999999997 9999999999999999998778999999998755 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. ..+.|.++|+
T Consensus 93 ~~G~~~~~~~G~~--~~~~l~~~l~ 115 (119)
T 1w4v_A 93 KNGDVVDKFVGIK--DEDQLEAFLK 115 (119)
T ss_dssp ETTEEEEEEESCC--CHHHHHHHHH
T ss_pred eCCcEEEEEcCCC--CHHHHHHHHH
Confidence 9999988888762 3445666654
No 43
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.82 E-value=3.5e-20 Score=121.78 Aligned_cols=106 Identities=21% Similarity=0.414 Sum_probs=81.4
Q ss_pred CCCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCCh--------------hHHhhhHHHHHHHHhCCC
Q 032841 1 MPLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCP--------------DCVRAEPVIYKTLEASPD 66 (132)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~--------------~C~~~~p~~~~~~~~~~~ 66 (132)
|+-+++.++..+|++.+ + .++++++|+|||+ ||+ +|+.+.|.++++++++++
T Consensus 1 m~~~v~~l~~~~f~~~~---~---~~~k~vlv~F~a~--------wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~ 66 (123)
T 1oaz_A 1 MSDKIIHLTDDSFDTDV---L---KADGAILVDFWAE--------WCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG 66 (123)
T ss_dssp -CCSCEECCSTTHHHHT---T---SCSSEEEEEEECS--------SCSCBSSSTTSCCSCCCCCCTTHHHHTTC------
T ss_pred CCCccEecChhhHHHHH---H---hCCCeEEEEEECC--------CCccccccccccccCCCCcHHHHHHHHHHHHHhcC
Confidence 66667777777777642 2 3789999999998 999 999999999999988877
Q ss_pred CcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 67 DIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 67 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++.++.||++... . ++.+|+|+++||++++++|+.+.++.|.. ..+.+.++|++
T Consensus 67 ~~~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~~ 120 (123)
T 1oaz_A 67 KLTVAKLNIDQNP---G------TAPKYGIRGIPTLLLFKNGEVAATKVGAL--SKGQLKEFLDA 120 (123)
T ss_dssp -CEEEEEETTSCT---T------TGGGGTCCBSSEEEEEESSSEEEEEESCC--CHHHHHHHHTT
T ss_pred CeEEEEEECCCCH---H------HHHHcCCCccCEEEEEECCEEEEEEeCCC--CHHHHHHHHHH
Confidence 8999999998765 2 77899999999999999999999988863 35567777764
No 44
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.81 E-value=6.5e-20 Score=119.42 Aligned_cols=84 Identities=20% Similarity=0.407 Sum_probs=71.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++ +++.|+.||++... + ++.+|+|+++||+++|
T Consensus 22 ~~~~vlv~f~a~--------wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~---~------~~~~~~i~~~Pt~~~~ 83 (118)
T 2f51_A 22 APGLVLVDFFAT--------WCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNG---N------AADAYGVSSIPALFFV 83 (118)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCH---H------HHHhcCCCCCCEEEEE
Confidence 688999999997 9999999999999999998 58999999998765 2 6789999999999999
Q ss_pred eC----CeEeEEecCcchhcHHHHHHhhh
Q 032841 106 EN----DIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~----g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++ |+.+.++.|... +.|+++++
T Consensus 84 ~~~~~~G~~~~~~~G~~~---~~l~~~~~ 109 (118)
T 2f51_A 84 KKEGNEIKTLDQFVGADV---SRIKADIE 109 (118)
T ss_dssp EEETTEEEEEEEEESCCH---HHHHHHHH
T ss_pred eCCCCcceEEEeecCCCH---HHHHHHHH
Confidence 98 989999999742 23555443
No 45
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.81 E-value=1e-19 Score=119.95 Aligned_cols=84 Identities=15% Similarity=0.288 Sum_probs=71.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.+++++++++ ++.|+.||++... + ++.+|+|.++||++++
T Consensus 36 ~~k~vvv~F~a~--------wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~---~------l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 36 EDILTVAWFTAV--------WCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNS---E------IVSKCRVLQLPTFIIA 97 (125)
T ss_dssp SSSCEEEEEECT--------TCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred cCCEEEEEEECC--------cCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH---H------HHHHcCCCcccEEEEE
Confidence 789999999997 99999999999999999985 7999999998755 2 7788999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. .+.|.++|+
T Consensus 98 ~~G~~~~~~~G~~---~~~l~~~l~ 119 (125)
T 1r26_A 98 RSGKMLGHVIGAN---PGMLRQKLR 119 (125)
T ss_dssp ETTEEEEEEESSC---HHHHHHHHH
T ss_pred eCCeEEEEEeCCC---HHHHHHHHH
Confidence 9999999988842 234444443
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.81 E-value=1.4e-19 Score=113.60 Aligned_cols=97 Identities=16% Similarity=0.425 Sum_probs=78.4
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCC
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQH 86 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 86 (132)
.++..+|++.+. ++++++|+||++ ||++|+.+.|.++++.+.+++ +.++.+|++... +
T Consensus 3 ~l~~~~~~~~~~-------~~~~~~v~f~~~--------~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~--- 60 (104)
T 2e0q_A 3 HLDSKNFDSFLA-------SHEIAVVDFWAE--------WCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENP---D--- 60 (104)
T ss_dssp ECCTTTHHHHHH-------HSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---H---
T ss_pred ecCHHHHHHHHh-------cCCcEEEEEECC--------CChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCH---H---
Confidence 455667777643 678999999997 999999999999999999975 999999998755 2
Q ss_pred CccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 87 PFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||++++++|+.+.++.|.. ..+.+.++|+
T Consensus 61 ---~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~--~~~~l~~~l~ 99 (104)
T 2e0q_A 61 ---IAARYGVMSLPTVIFFKDGEPVDEIIGAV--PREEIEIRIK 99 (104)
T ss_dssp ---HHHHTTCCSSCEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred ---HHHhCCccccCEEEEEECCeEhhhccCCC--CHHHHHHHHH
Confidence 67789999999999999999988888863 2334444443
No 47
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.81 E-value=4.4e-20 Score=136.11 Aligned_cols=103 Identities=17% Similarity=0.352 Sum_probs=83.7
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRN 83 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 83 (132)
.++.++..+|++.+. .+.+++++|+|||+ ||++|+.+.|.++++.+++++++.|+.||++..+ +
T Consensus 8 ~v~~~~~~~f~~~~~-----~~~~~~v~v~f~a~--------wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~---~ 71 (287)
T 3qou_A 8 NIVNINESNLQQVLE-----QSMTTPVLFYFWSE--------RSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ---M 71 (287)
T ss_dssp TEEECCTTTHHHHHT-----TTTTSCEEEEEECT--------TCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH---H
T ss_pred ccEECCHHHHHHHHH-----hcCCCeEEEEEECC--------CChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH---H
Confidence 355677778887532 12489999999997 9999999999999999999878999999998765 2
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||+++|++|+.+.++.|.. ..+.+..++.
T Consensus 72 ------~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~--~~~~l~~~l~ 110 (287)
T 3qou_A 72 ------IAAQFGLRAIPTVYLFQNGQPVDGFQGPQ--PEEAIRALLD 110 (287)
T ss_dssp ------HHHTTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred ------HHHHcCCCCCCeEEEEECCEEEEEeeCCC--CHHHHHHHHH
Confidence 77899999999999999999999988863 2334555543
No 48
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.81 E-value=4.4e-20 Score=121.49 Aligned_cols=88 Identities=20% Similarity=0.386 Sum_probs=77.2
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFR 104 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~ 104 (132)
.++++++|+|||+ ||++|+.+.|.++++.+++++++.++.||++... . ++.+|+|+++||+++
T Consensus 40 ~~~k~vlv~F~a~--------wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~---~------l~~~~~v~~~Pt~~~ 102 (128)
T 3ul3_B 40 MKNTVIVLYFFAK--------WCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE---S------LARKFSVKSLPTIIL 102 (128)
T ss_dssp SCCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH---H------HHHHTTCCSSSEEEE
T ss_pred ccCCEEEEEEECC--------CCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---H------HHHHcCCCCcCEEEE
Confidence 3789999999998 9999999999999999988778999999998765 2 778999999999999
Q ss_pred EeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 105 WENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+++|+.+.++.|. ...+.|.++|+.
T Consensus 103 ~~~G~~~~~~~G~--~~~~~l~~~l~~ 127 (128)
T 3ul3_B 103 LKNKTMLARKDHF--VSSNDLIALIKK 127 (128)
T ss_dssp EETTEEEEEESSC--CCHHHHHHHHTT
T ss_pred EECCEEEEEecCC--CCHHHHHHHHHh
Confidence 9999999998886 345678888865
No 49
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.81 E-value=1.6e-19 Score=117.81 Aligned_cols=100 Identities=16% Similarity=0.317 Sum_probs=80.3
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC-CcCccC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD-RPTWRN 83 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~-~~~~~~ 83 (132)
+..++.++|++.+. . .++++++|+|||+ |||+|+.+.|.++++.++++ ++.++.+|++. .. +
T Consensus 20 v~~l~~~~~~~~~~---~--~~~~~~vv~f~a~--------wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~---~ 82 (124)
T 1faa_A 20 VTEVNKDTFWPIVK---A--AGDKPVVLDMFTQ--------WCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENK---T 82 (124)
T ss_dssp EEEECTTTHHHHHH---H--TTTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTH---H
T ss_pred eEEecchhHHHHHH---h--cCCCEEEEEEECC--------cCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchH---H
Confidence 44555667766543 1 2678999999997 99999999999999999987 69999999873 32 2
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||++++++|+.+.++.|.. .+.+.++|+
T Consensus 83 ------~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~---~~~l~~~i~ 120 (124)
T 1faa_A 83 ------LAKELGIRVVPTFKILKENSVVGEVTGAK---YDKLLEAIQ 120 (124)
T ss_dssp ------HHHHHCCSSSSEEEEEETTEEEEEEESSC---HHHHHHHHH
T ss_pred ------HHHHcCCCeeeEEEEEeCCcEEEEEcCCC---HHHHHHHHH
Confidence 67789999999999999999999988874 455666665
No 50
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.81 E-value=3.2e-19 Score=127.81 Aligned_cols=102 Identities=20% Similarity=0.420 Sum_probs=83.0
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRN 83 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 83 (132)
....++..+|++. ++ .++++++|+|||+ ||++|+.+.|.++++++++++++.++.||++... +
T Consensus 13 ~~~~lt~~~f~~~---v~---~~~k~vvv~F~a~--------wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~ 75 (222)
T 3dxb_A 13 KIIHLTDDSFDTD---VL---KADGAILVDFWAE--------WCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---G 75 (222)
T ss_dssp CCEECCTTTHHHH---HT---TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCT---T
T ss_pred CceeCCHHHHHHH---HH---hcCCEEEEEEECC--------cCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCH---H
Confidence 3455666777764 22 3789999999997 9999999999999999999877999999998765 3
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.|.++|+
T Consensus 76 ------l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--~~~~l~~~l~ 114 (222)
T 3dxb_A 76 ------TAPKYGIRGIPTLLLFKNGEVAATKVGAL--SKGQLKEFLD 114 (222)
T ss_dssp ------TGGGGTCCSBSEEEEEETTEEEEEEESCC--CHHHHHHHHH
T ss_pred ------HHHHcCCCcCCEEEEEECCeEEEEecccc--ChHHHHHHHH
Confidence 67899999999999999999999988863 2344555543
No 51
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2.2e-19 Score=119.67 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=72.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.+++++++++ ++.|+.||++... .+|+|.++||+++|
T Consensus 29 ~~~~vvv~f~a~--------wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------------~~~~i~~~Pt~~~~ 87 (135)
T 2dbc_A 29 KDLWVVIHLYRS--------SVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------------EHYHDNCLPTIFVY 87 (135)
T ss_dssp SSCEEEEEECCT--------TCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------------SSCCSSCCSEEEEE
T ss_pred CCCEEEEEEECC--------CChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------------ccCCCCCCCEEEEE
Confidence 457999999997 99999999999999999986 7999999987643 47999999999999
Q ss_pred eCCeEeEEecCcch-----hcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEA-----HLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~-----~~~~~l~~~l~ 130 (132)
++|+.+.++.|... ...+.|+++|+
T Consensus 88 ~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~ 117 (135)
T 2dbc_A 88 KNGQIEGKFIGIIECGGINLKLEELEWKLS 117 (135)
T ss_dssp SSSSCSEEEESTTTTTCTTCCHHHHHHHHH
T ss_pred ECCEEEEEEEeEEeeCCCcCCHHHHHHHHH
Confidence 99999999998742 25677887775
No 52
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=5.7e-20 Score=120.83 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=78.3
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC----CCcEEEEEEeCCCcC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP----DDIALLQAYVGDRPT 80 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~----~~~~~~~v~~~~~~~ 80 (132)
++.++..+|++. +. .++++++|+|||+ ||++|+.+.|.++++++++. +++.|+.||++...
T Consensus 9 v~~l~~~~~~~~---~~---~~~~~~lv~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~- 73 (133)
T 1x5d_A 9 VIELTDDSFDKN---VL---DSEDVWMVEFYAP--------WCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ- 73 (133)
T ss_dssp CEECCTTHHHHH---TT---TSSSEEEEEEECT--------TCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC-
T ss_pred CEEcCHhhHHHH---Hh---cCCCeEEEEEECC--------CCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH-
Confidence 344454555543 22 3688999999997 99999999999999998875 67999999998754
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
. ++.+|+|+++||+++|++|+.+.++.|.. ..+.|.+||.
T Consensus 74 --~------l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~--~~~~l~~~l~ 113 (133)
T 1x5d_A 74 --V------LASRYGIRGFPTIKIFQKGESPVDYDGGR--TRSDIVSRAL 113 (133)
T ss_dssp --H------HHHHHTCCSSSEEEEEETTEEEEEECSCC--SHHHHHHHHH
T ss_pred --H------HHHhCCCCeeCeEEEEeCCCceEEecCCC--CHHHHHHHHH
Confidence 2 77899999999999999999888888852 2334555543
No 53
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.81 E-value=1.6e-19 Score=116.89 Aligned_cols=101 Identities=22% Similarity=0.370 Sum_probs=80.9
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
+..++..+|++. ++ .++++++|+||++ ||++|+.+.|.++++++++++++.++.||++... .
T Consensus 14 v~~l~~~~~~~~---~~---~~~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~- 75 (121)
T 2i1u_A 14 TIKVTDASFATD---VL---SSNKPVLVDFWAT--------WCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP---E- 75 (121)
T ss_dssp SEECCTTTHHHH---TT---TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H-
T ss_pred ceecCHHHHHHH---HH---hCCCcEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH---H-
Confidence 334444555443 22 3688999999997 9999999999999999999778999999998755 2
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||++++++|+.+.++.|.. ..+.|.++|+
T Consensus 76 -----~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~--~~~~l~~~l~ 114 (121)
T 2i1u_A 76 -----TARNFQVVSIPTLILFKDGQPVKRIVGAK--GKAALLRELS 114 (121)
T ss_dssp -----HHHHTTCCSSSEEEEEETTEEEEEEESCC--CHHHHHHHTC
T ss_pred -----HHHhcCCCcCCEEEEEECCEEEEEecCCC--CHHHHHHHHH
Confidence 67789999999999999999988888864 3446777765
No 54
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.81 E-value=2.8e-19 Score=114.32 Aligned_cols=100 Identities=17% Similarity=0.363 Sum_probs=77.2
Q ss_pred chHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccc
Q 032841 12 SFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVN 91 (132)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 91 (132)
+.+++.+.+..+..++++++|+||++ ||++|+.+.|.++++.++++ ++.++.+|++... + ++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~------~~ 72 (113)
T 1ti3_A 11 TVDTWKEHFEKGKGSQKLIVVDFTAS--------WCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELK---A------VA 72 (113)
T ss_dssp SHHHHHHHHHHHTTSSSEEEEEEECS--------SCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCH---H------HH
T ss_pred cHHHHHHHHHHhhhcCCeEEEEEECC--------CCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccH---H------HH
Confidence 44444332333334689999999997 99999999999999999987 7999999998755 2 67
Q ss_pred ccccccccceEEEEeCCeEeEEecCcc-hhcHHHHHHhh
Q 032841 92 SRFKLTGVPTLFRWENDIVSGRLEDHE-AHLEHKIKALL 129 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~~g~~~~~~~~~~-~~~~~~l~~~l 129 (132)
.+|+|.++||++++++|+.+.++.|.. ....+.|++++
T Consensus 73 ~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 73 EEWNVEAMPTFIFLKDGKLVDKTVGADKDGLPTLVAKHA 111 (113)
T ss_dssp HHHHCSSTTEEEEEETTEEEEEEECCCTTHHHHHHHHHH
T ss_pred HhCCCCcccEEEEEeCCEEEEEEecCCHHHHHHHHHHhh
Confidence 789999999999999999998888852 23344444444
No 55
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.81 E-value=2.4e-19 Score=113.28 Aligned_cols=86 Identities=16% Similarity=0.405 Sum_probs=74.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.+++.+++.++.+|++... + ++.+|+|.++||++++
T Consensus 19 ~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 19 SGKLVVLDFFAT--------WCGPCKMISPKLVELSTQFADNVVVLKVDVDECE---D------IAMEYNISSMPTFVFL 81 (106)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------cCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH---H------HHHHcCCCcccEEEEE
Confidence 678999999997 9999999999999999998668999999998755 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++|+.+.++.|. ..+.|.++|++
T Consensus 82 ~~G~~~~~~~g~---~~~~l~~~i~~ 104 (106)
T 1xwb_A 82 KNGVKVEEFAGA---NAKRLEDVIKA 104 (106)
T ss_dssp ETTEEEEEEESC---CHHHHHHHHHH
T ss_pred cCCcEEEEEcCC---CHHHHHHHHHH
Confidence 999999988884 34557777653
No 56
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.81 E-value=1.6e-19 Score=120.08 Aligned_cols=84 Identities=17% Similarity=0.341 Sum_probs=71.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++.++++ ++.|+.||++... + ++.+|+|+++||++++
T Consensus 45 ~~k~vvv~f~a~--------wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 106 (139)
T 3d22_A 45 DGKIVLANFSAR--------WCGPSRQIAPYYIELSENYP-SLMFLVIDVDELS---D------FSASWEIKATPTFFFL 106 (139)
T ss_dssp HTCCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---H------HHHHTTCCEESEEEEE
T ss_pred cCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccH---H------HHHHcCCCcccEEEEE
Confidence 578999999997 99999999999999999985 7999999998765 2 6789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. .+.|+++|+
T Consensus 107 ~~G~~~~~~~G~~---~~~l~~~l~ 128 (139)
T 3d22_A 107 RDGQQVDKLVGAN---KPELHKKIT 128 (139)
T ss_dssp ETTEEEEEEESCC---HHHHHHHHH
T ss_pred cCCeEEEEEeCCC---HHHHHHHHH
Confidence 9999999998872 334444443
No 57
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.80 E-value=5e-19 Score=111.46 Aligned_cols=84 Identities=18% Similarity=0.423 Sum_probs=73.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ |||+|+.+.|.++++.++++ ++.++.+|++... + ++.+|+|.++||++++
T Consensus 18 ~~~~~~v~f~~~--------~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 18 KGRLIVVDFFAQ--------WCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE---E------AAAKYSVTAMPTFVFI 79 (104)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEECC--------CCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH---H------HHHHcCCccccEEEEE
Confidence 688999999997 99999999999999999987 8999999998755 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|. ..+.|.++|+
T Consensus 80 ~~g~~~~~~~G~---~~~~l~~~l~ 101 (104)
T 2vim_A 80 KDGKEVDRFSGA---NETKLRETIT 101 (104)
T ss_dssp ETTEEEEEEESS---CHHHHHHHHH
T ss_pred eCCcEEEEEeCC---CHHHHHHHHH
Confidence 999999998884 3455777765
No 58
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.80 E-value=7.7e-20 Score=121.72 Aligned_cols=86 Identities=17% Similarity=0.356 Sum_probs=69.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.+.++.+++++++.++.||++... + ++.+|+|.++||+++|
T Consensus 50 ~~k~vlv~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 112 (141)
T 3hxs_A 50 GDKPAIVDFYAD--------WCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP---E------LARDFGIQSIPTIWFV 112 (141)
T ss_dssp CSSCEEEEEECT--------TCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH---H------HHHHcCCCCcCEEEEE
Confidence 479999999997 9999999999999999999878999999998765 2 7789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++.+.++.|.. ..+.|.++|+
T Consensus 113 ~~~g~~~~~~G~~--~~~~l~~~l~ 135 (141)
T 3hxs_A 113 PMKGEPQVNMGAL--SKEQLKGYID 135 (141)
T ss_dssp CSSSCCEEEESCC--CHHHHHHHHH
T ss_pred eCCCCEEEEeCCC--CHHHHHHHHH
Confidence 6544444777752 2334555443
No 59
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.80 E-value=3.8e-19 Score=114.96 Aligned_cols=83 Identities=20% Similarity=0.413 Sum_probs=71.9
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++ ++.++.||++... + ++++|+|+++||++++
T Consensus 32 ~~~~~vv~f~a~--------wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 32 KNKLVVVDFFAT--------WCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE---E------TARKYNISAMPTFIAI 92 (117)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH---H------HHHHcCCCccceEEEE
Confidence 688999999997 9999999999999999887 7999999998755 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|. ..+.|+++|+
T Consensus 93 ~~G~~~~~~~G~---~~~~l~~~l~ 114 (117)
T 2xc2_A 93 KNGEKVGDVVGA---SIAKVEDMIK 114 (117)
T ss_dssp ETTEEEEEEESS---CHHHHHHHHH
T ss_pred eCCcEEEEEeCC---CHHHHHHHHH
Confidence 999999999884 3445777765
No 60
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.80 E-value=1.5e-19 Score=117.97 Aligned_cols=99 Identities=20% Similarity=0.399 Sum_probs=80.2
Q ss_pred ccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCC-cEEEEEEeCCCcCccCCCC
Q 032841 8 ATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDD-IALLQAYVGDRPTWRNPQH 86 (132)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 86 (132)
..+.+.+++ ++++ .++++++|+||++ ||++|+.+.|.++++.+++++. +.++.||++... +
T Consensus 18 ~~i~~~~~f-~~~l---~~~k~vvv~f~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~---~--- 79 (121)
T 2j23_A 18 QVISSYDQF-KQVT---GGDKVVVIDFWAT--------WCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS---Q--- 79 (121)
T ss_dssp EECCSHHHH-HHHH---SSSSCEEEEEECT--------TCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH---H---
T ss_pred EEcCCHHHH-HHHH---cCCCEEEEEEECC--------CCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH---H---
Confidence 345566666 3344 3789999999997 9999999999999999888743 999999998755 2
Q ss_pred CccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 87 PFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++|+|.++||++++++|+.+.++.|. ..+.|+++|+
T Consensus 80 ---~~~~~~v~~~Pt~~~~~~G~~~~~~~G~---~~~~l~~~l~ 117 (121)
T 2j23_A 80 ---IAQEVGIRAMPTFVFFKNGQKIDTVVGA---DPSKLQAAIT 117 (121)
T ss_dssp ---HHHHHTCCSSSEEEEEETTEEEEEEESS---CHHHHHHHHH
T ss_pred ---HHHHcCCCcccEEEEEECCeEEeeEcCC---CHHHHHHHHH
Confidence 6778999999999999999999998886 3456767665
No 61
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.80 E-value=3.2e-19 Score=114.87 Aligned_cols=83 Identities=19% Similarity=0.358 Sum_probs=70.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.++++ ++.++.+|++... . ++.+|+|+++||++++
T Consensus 27 ~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 88 (118)
T 2vm1_A 27 TGKLVIIDFTAS--------WCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK---D------VAEAYNVEAMPTFLFI 88 (118)
T ss_dssp HTCCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---H------HHHHTTCCSBSEEEEE
T ss_pred CCCEEEEEEECC--------CCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH---H------HHHHcCCCcCcEEEEE
Confidence 578999999997 99999999999999999987 7999999998754 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
++|+.+.++.|.. .+.|.++|
T Consensus 89 ~~g~~~~~~~g~~---~~~l~~~l 109 (118)
T 2vm1_A 89 KDGEKVDSVVGGR---KDDIHTKI 109 (118)
T ss_dssp ETTEEEEEEESCC---HHHHHHHH
T ss_pred eCCeEEEEecCCC---HHHHHHHH
Confidence 9999999888852 33444444
No 62
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=120.14 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=76.9
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC---CcEEEEEEeCCCcCc
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD---DIALLQAYVGDRPTW 81 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~---~~~~~~v~~~~~~~~ 81 (132)
+..++..+|++.+. .+++++|+||++ ||++|+.+.|.++++++++.+ ++.++.||++...
T Consensus 19 v~~l~~~~~~~~~~-------~~~~vlv~f~a~--------wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-- 81 (140)
T 2dj1_A 19 VWVLNDGNFDNFVA-------DKDTVLLEFYAP--------WCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS-- 81 (140)
T ss_dssp EEECCTTTHHHHHT-------TCSEEEEEECCT--------TCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH--
T ss_pred CEEcChHhHHHHHh-------cCCeEEEEEECC--------CCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH--
Confidence 34456666666532 689999999997 999999999999999887753 3999999987754
Q ss_pred cCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|.++||+++|++|+ +.++.|. ...+.|.+||+
T Consensus 82 -~------~~~~~~v~~~Pt~~~~~~G~-~~~~~g~--~~~~~l~~~l~ 120 (140)
T 2dj1_A 82 -M------LASKFDVSGYPTIKILKKGQ-AVDYDGS--RTQEEIVAKVR 120 (140)
T ss_dssp -H------HHHHTTCCSSSEEEEEETTE-EEECCSC--CCHHHHHHHHH
T ss_pred -H------HHHHCCCCccCeEEEEECCc-EEEcCCC--CCHHHHHHHHH
Confidence 2 67899999999999999998 6677765 23445555554
No 63
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.79 E-value=8.9e-20 Score=121.35 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=63.9
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
+++|+|||+ ||++|+.+.|.+++++++++ +.|+.||++...........-.++.+|+|.++||++++++|
T Consensus 33 ~vlv~F~a~--------wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G 102 (135)
T 3emx_A 33 DAILAVYSK--------TCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEG 102 (135)
T ss_dssp SEEEEEEET--------TCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETT
T ss_pred cEEEEEECC--------cCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCC
Confidence 999999998 99999999999999998886 99999999543211000000016778999999999999999
Q ss_pred eEeEEecCc
Q 032841 109 IVSGRLEDH 117 (132)
Q Consensus 109 ~~~~~~~~~ 117 (132)
+.+.++.|.
T Consensus 103 ~~v~~~~G~ 111 (135)
T 3emx_A 103 RIVDKLVGA 111 (135)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999999987
No 64
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.79 E-value=2e-19 Score=115.71 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=80.3
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC---CCcEEEEEEeCCCcCc
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP---DDIALLQAYVGDRPTW 81 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~---~~~~~~~v~~~~~~~~ 81 (132)
+..++..+|++.+. ++++++|+||++ ||++|+.+.|.++++.+.+. .++.++.+|++...
T Consensus 9 v~~l~~~~~~~~~~-------~~~~~lv~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-- 71 (120)
T 1mek_A 9 VLVLRKSNFAEALA-------AHKYLLVEFYAP--------WCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES-- 71 (120)
T ss_dssp EEECCTTTHHHHHH-------HCSEEEEEEECS--------SCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC--
T ss_pred cEEechhhHHHHHc-------cCCeEEEEEECC--------CCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH--
Confidence 44566677776543 578999999997 99999999999999998875 36899999987754
Q ss_pred cCCCCCccccccccccccceEEEEeCCeEe--EEecCcchhcHHHHHHhhhc
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWENDIVS--GRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~--~~~~~~~~~~~~~l~~~l~~ 131 (132)
. ++.+|+|+++||++++++|+.+ .++.|. ...+.|.+||++
T Consensus 72 -~------~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~--~~~~~l~~~l~~ 114 (120)
T 1mek_A 72 -D------LAQQYGVRGYPTIKFFRNGDTASPKEYTAG--READDIVNWLKK 114 (120)
T ss_dssp -S------SHHHHTCCSSSEEEEEESSCSSSCEECCCC--SSHHHHHHHHHT
T ss_pred -H------HHHHCCCCcccEEEEEeCCCcCCcccccCc--cCHHHHHHHHHh
Confidence 2 6778999999999999999876 677764 345567777653
No 65
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.79 E-value=4.9e-19 Score=120.01 Aligned_cols=84 Identities=18% Similarity=0.449 Sum_probs=71.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+||++ ||++|+.+.|.++++.++++ ++.|+.||++... + ++.+|+|+++||+++|
T Consensus 31 ~~~~vvv~F~a~--------wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 31 AKSLLVVHFWAP--------WAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVP---E------VSEKYEISSVPTFLFF 92 (153)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEECC--------CCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCH---H------HHHHcCCCCCCEEEEE
Confidence 389999999997 99999999999999999985 7999999998765 2 6778999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. .+.|.++|+
T Consensus 93 ~~G~~~~~~~G~~---~~~l~~~i~ 114 (153)
T 2wz9_A 93 KNSQKIDRLDGAH---APELTKKVQ 114 (153)
T ss_dssp ETTEEEEEEESSC---HHHHHHHHH
T ss_pred ECCEEEEEEeCCC---HHHHHHHHH
Confidence 9999999988853 233555543
No 66
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.6e-19 Score=118.55 Aligned_cols=99 Identities=17% Similarity=0.279 Sum_probs=77.0
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQ 85 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 85 (132)
..++..+|++. +. .++++++|+||++ ||++|+.+.|.++++++++++.+.|+.||++... .
T Consensus 20 ~~l~~~~f~~~---~~---~~~~~~lv~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~-- 80 (130)
T 2dml_A 20 IELTPSNFNRE---VI---QSDGLWLVEFYAP--------WCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ---S-- 80 (130)
T ss_dssp EECCTTTHHHH---TT---TCSSCEEEEEECT--------TCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH---H--
T ss_pred EECCHHHHHHH---Hh---cCCCeEEEEEECC--------CCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH---H--
Confidence 44455556553 22 3688999999997 9999999999999999999877999999998755 2
Q ss_pred CCccccccccccccceEEEEeCCeE-eEEecCcchhcHHHHHHhh
Q 032841 86 HPFRVNSRFKLTGVPTLFRWENDIV-SGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~~g~~-~~~~~~~~~~~~~~l~~~l 129 (132)
++.+|+|+++||+++|++|+. +.++.|.. ..+.+.++|
T Consensus 81 ----l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~--~~~~l~~~l 119 (130)
T 2dml_A 81 ----LGGQYGVQGFPTIKIFGANKNKPEDYQGGR--TGEAIVDAA 119 (130)
T ss_dssp ----HHHHHTCCSSSEEEEESSCTTSCEECCSCC--SHHHHHHHH
T ss_pred ----HHHHcCCCccCEEEEEeCCCCeEEEeecCC--CHHHHHHHH
Confidence 678999999999999998765 67777753 233444444
No 67
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=3.3e-19 Score=118.48 Aligned_cols=85 Identities=14% Similarity=0.331 Sum_probs=70.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.++++++++++++.++.||++... . ++.+|+|.++||+++|
T Consensus 37 ~~k~~lv~f~a~--------wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 99 (136)
T 2l5l_A 37 GDKPAIVDFYAD--------WCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ---E------LAGAFGIRSIPSILFI 99 (136)
T ss_dssp CSSCEEEEEECT--------TSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---H------HHHHTTCCSSCEEEEE
T ss_pred CCCEEEEEEECC--------cCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH---H------HHHHcCCCCCCEEEEE
Confidence 578999999997 9999999999999999999878999999998755 2 6788999999999999
Q ss_pred -eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 -ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 -~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+|+.+ ++.|. ...+.|.++|+
T Consensus 100 ~~~G~~~-~~~G~--~~~~~l~~~l~ 122 (136)
T 2l5l_A 100 PMEGKPE-MAQGA--MPKASFKKAID 122 (136)
T ss_dssp CSSSCCE-EEESC--CCHHHHHHHHH
T ss_pred CCCCcEE-EEeCC--CCHHHHHHHHH
Confidence 577766 56664 23445666654
No 68
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=9e-19 Score=114.56 Aligned_cols=99 Identities=20% Similarity=0.444 Sum_probs=77.0
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcCcc
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPTWR 82 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 82 (132)
.++.++..+|++.+ .+ .++|+|||+ ||++|+.+.|.++++++++++ ++.++.||++...
T Consensus 8 ~v~~l~~~~f~~~~--------~~-~vlv~f~a~--------wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~--- 67 (126)
T 1x5e_A 8 NVRVITDENWRELL--------EG-DWMIEFYAP--------WCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP--- 67 (126)
T ss_dssp SEEECCTTTHHHHT--------SS-EEEEEEECS--------SCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH---
T ss_pred ccEEecHHHHHHHh--------CC-CEEEEEECC--------CCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH---
Confidence 34556666777642 22 489999998 999999999999999988764 7999999998755
Q ss_pred CCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+ ++.+|+|+++||++++++|+ +.++.|. ...+.|.++|++
T Consensus 68 ~------~~~~~~v~~~Pt~~~~~~G~-~~~~~G~--~~~~~l~~~l~~ 107 (126)
T 1x5e_A 68 G------LSGRFIINALPTIYHCKDGE-FRRYQGP--RTKKDFINFISD 107 (126)
T ss_dssp H------HHHHTTCCSSSEEEEEETTE-EEECCSC--CCHHHHHHHHHT
T ss_pred H------HHHHcCCcccCEEEEEeCCe-EEEeecC--CCHHHHHHHHHH
Confidence 2 67899999999999999898 4677775 334566666653
No 69
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.78 E-value=1.7e-19 Score=116.88 Aligned_cols=90 Identities=12% Similarity=0.219 Sum_probs=68.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ |||+|+.+.|.+++++++++.. ++.++++....... .-.++.+|+|.++||++++
T Consensus 28 ~~~~~~v~f~a~--------wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~---~~~~~~~~~i~~~Pt~~~~ 94 (118)
T 1zma_A 28 KKETATFFIGRK--------TCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLND---LQAFRSRYGIPTVPGFVHI 94 (118)
T ss_dssp TTCCEEEEEECT--------TCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHH---HHHHHHHHTCCSSCEEEEE
T ss_pred CCCeEEEEEECC--------CCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHH---HHHHHHHcCCCCCCeEEEE
Confidence 678999999997 9999999999999999887634 45566654321000 0015678999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. ..+.|.+||+
T Consensus 95 ~~G~~~~~~~G~~--~~~~l~~~l~ 117 (118)
T 1zma_A 95 TDGQINVRCDSSM--SAQEIKDFAG 117 (118)
T ss_dssp ETTEEEEECCTTC--CHHHHHHHHT
T ss_pred ECCEEEEEecCCC--CHHHHHHHhh
Confidence 9999998888763 4567888876
No 70
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.78 E-value=6.2e-19 Score=115.33 Aligned_cols=87 Identities=15% Similarity=0.209 Sum_probs=72.6
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEE--eCCCcCccCCCCCccccccccccccceE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAY--VGDRPTWRNPQHPFRVNSRFKLTGVPTL 102 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~v~~vPt~ 102 (132)
.++++++|+|||+ ||++|+.+.|.++++.+++.+++.++.|| ++... . ++.+|+|.++||+
T Consensus 24 ~~~k~~lv~f~a~--------wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~---~------~~~~~~v~~~Pt~ 86 (126)
T 2l57_A 24 KEGIPTIIMFKTD--------TCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNI---D------LAYKYDANIVPTT 86 (126)
T ss_dssp CSSSCEEEEEECS--------SCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHH---H------HHHHTTCCSSSEE
T ss_pred hCCCcEEEEEECC--------CCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchH---H------HHHHcCCcceeEE
Confidence 4789999999998 99999999999999999987789999999 66543 2 6778999999999
Q ss_pred EEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 103 FRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 103 ~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++ +|+.+.++.|.. ..+.|.++|+
T Consensus 87 ~~~~~~G~~~~~~~G~~--~~~~l~~~l~ 113 (126)
T 2l57_A 87 VFLDKEGNKFYVHQGLM--RKNNIETILN 113 (126)
T ss_dssp EEECTTCCEEEEEESCC--CHHHHHHHHH
T ss_pred EEECCCCCEEEEecCCC--CHHHHHHHHH
Confidence 9999 899888888852 3345555554
No 71
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.78 E-value=5.6e-19 Score=123.41 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=82.7
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-----CCcEEEEEEeCCC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-----DDIALLQAYVGDR 78 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-----~~~~~~~v~~~~~ 78 (132)
.++.++..+|++++. . ..+.+++|+|||+. +...++||++|+.+.|.++++++++. +++.|++||+++.
T Consensus 19 ~vi~lt~~nF~~~v~---~--~~~~~vvV~F~A~~-~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~ 92 (178)
T 3ga4_A 19 GVITVTADNYPLLSR---G--VPGYFNILYITMRG-TNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV 92 (178)
T ss_dssp SEEECCTTTHHHHTT---C--CTTCEEEEEEECCS-BCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC
T ss_pred CCEECCHHHHHHHHc---c--cCCCcEEEEEeCCC-CCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC
Confidence 456778888887632 1 24678999999930 00022499999999999999998875 6899999999987
Q ss_pred cCccCCCCCccccccccccccceEEEEeCCeEeE------------Ee--cCcchhcHHHHHHhhhc
Q 032841 79 PTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSG------------RL--EDHEAHLEHKIKALLSA 131 (132)
Q Consensus 79 ~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~------------~~--~~~~~~~~~~l~~~l~~ 131 (132)
+ + ++.+|+|+++||+++|++|+... ++ ........+.+.+||+.
T Consensus 93 ~---~------la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 93 P---Q------LVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp H---H------HHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred H---H------HHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 6 3 88899999999999999875322 22 11124556678888863
No 72
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.78 E-value=8.9e-20 Score=123.15 Aligned_cols=96 Identities=16% Similarity=0.248 Sum_probs=63.4
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCC--ChhHHhhhHHHHHHHHhCCCCcE--EEEEEeCCCcCcc
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSW--CPDCVRAEPVIYKTLEASPDDIA--LLQAYVGDRPTWR 82 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pW--C~~C~~~~p~~~~~~~~~~~~~~--~~~v~~~~~~~~~ 82 (132)
.++..+|++++. +++.++|+|+++ | |++|+.+.|.++++++++ +++. |+.||++...
T Consensus 21 ~l~~~~f~~~i~-------~~~~~vv~f~~~--------~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~--- 81 (142)
T 2es7_A 21 PVEASTVDDWIK-------RVGDGVILLSSD--------PRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSE--- 81 (142)
T ss_dssp ECCCC---------------CCSEEEEECCC--------SCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHH---
T ss_pred ccccccHHHHHH-------hCCCEEEEEECC--------CCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCH---
Confidence 344566776643 445678889886 6 999999999999999999 6888 9999998755
Q ss_pred CCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhh
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
+ ++.+|+|+++||+++|++|+.+.++.|... .+.|.++|
T Consensus 82 ~------la~~~~V~~iPT~~~fk~G~~v~~~~G~~~--~~~l~~~i 120 (142)
T 2es7_A 82 A------IGDRFNVRRFPATLVFTDGKLRGALSGIHP--WAELLTLM 120 (142)
T ss_dssp H------HHHTTTCCSSSEEEEESCC----CEESCCC--HHHHHHHH
T ss_pred H------HHHhcCCCcCCeEEEEeCCEEEEEEeCCCC--HHHHHHHH
Confidence 2 778999999999999999999999988632 23444444
No 73
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.77 E-value=1.4e-18 Score=115.78 Aligned_cols=87 Identities=18% Similarity=0.442 Sum_probs=71.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.++ ++|+||++ ||++|+.+.|.++++++++++++.|+.||++... + ++.+|+|.++||+++|
T Consensus 50 ~~~-vvv~f~~~--------~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 50 APL-TLVDFFAP--------WCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP---G------LAARYGVRSVPTLVLF 111 (140)
T ss_dssp CCE-EEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCC-EEEEEECC--------CCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH---H------HHHHCCCCccCEEEEE
Confidence 444 99999997 9999999999999999999878999999998765 2 6778999999999999
Q ss_pred eCCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. ....+.|+++++
T Consensus 112 ~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 112 RRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred eCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 9999998888863 223344444443
No 74
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.77 E-value=2.7e-18 Score=125.43 Aligned_cols=87 Identities=11% Similarity=0.190 Sum_probs=75.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.|.+++++++ ++.|+.||++. . . ++.+|+|.++||+++|
T Consensus 132 ~~k~VvV~Fya~--------wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~-~---~------l~~~~~I~~~PTll~~ 192 (245)
T 1a0r_P 132 KITTIVVHIYED--------GIKGCDALNSSLICLAAEYP-MVKFCKIKASN-T---G------AGDRFSSDVLPTLLVY 192 (245)
T ss_dssp TTCEEEEEEECT--------TSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH-H---C------CTTSSCTTTCSEEEEE
T ss_pred CCCEEEEEEECC--------CChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc-H---H------HHHHCCCCCCCEEEEE
Confidence 588999999997 99999999999999999997 69999999976 2 2 6678999999999999
Q ss_pred eCCeEeEEecCcch-----hcHHHHHHhhhc
Q 032841 106 ENDIVSGRLEDHEA-----HLEHKIKALLSA 131 (132)
Q Consensus 106 ~~g~~~~~~~~~~~-----~~~~~l~~~l~~ 131 (132)
++|+.+.++.|... ...+.|+.||..
T Consensus 193 ~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 193 KGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp ETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred ECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 99999999998732 345678888764
No 75
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.4e-19 Score=119.17 Aligned_cols=87 Identities=18% Similarity=0.360 Sum_probs=66.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCcCccCCCCCccccccccccccceEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLF 103 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~ 103 (132)
++++++|+|||+ ||++|+.+.|.++++++++. +++.++.||++... . ++.+|+|.++||++
T Consensus 24 ~~~~vlv~f~a~--------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~ 86 (133)
T 2dj3_A 24 PKKDVLIEFYAP--------WCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND---I------TNDQYKVEGFPTIY 86 (133)
T ss_dssp TTSEEEEEECCT--------TCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC---C------CCSSCCCSSSSEEE
T ss_pred CCCcEEEEEECC--------CChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH---H------HHhhcCCCcCCEEE
Confidence 589999999997 99999999999999998876 46899999987754 2 56689999999999
Q ss_pred EEeCCeEeE--EecCcchhcHHHHHHhhh
Q 032841 104 RWENDIVSG--RLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 104 ~~~~g~~~~--~~~~~~~~~~~~l~~~l~ 130 (132)
++++|+.+. ++.|. ....+.|.+||+
T Consensus 87 ~~~~g~~~~~~~~~gg-~~~~~~l~~~l~ 114 (133)
T 2dj3_A 87 FAPSGDKKNPIKFEGG-NRDLEHLSKFID 114 (133)
T ss_dssp EECTTCTTSCEECCSS-CCSTTHHHHHHH
T ss_pred EEeCCCcccceEecCC-CcCHHHHHHHHH
Confidence 999876543 34422 122334555543
No 76
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.77 E-value=9.9e-19 Score=116.14 Aligned_cols=83 Identities=20% Similarity=0.372 Sum_probs=68.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.++++.+++ ++.++.||++... . ++.+|+|+++||+++|
T Consensus 39 ~~k~vvv~F~a~--------wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 39 QNSSIVIKFGAV--------WCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHP---K------LNDQHNIKALPTFEFY 99 (133)
T ss_dssp CCSEEEEEEECT--------TCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHhc--CEEEEEEeccchH---H------HHHhcCCCCCCEEEEE
Confidence 478999999998 9999999999999988776 5899999988755 2 6778999999999999
Q ss_pred e--CCe--EeEEecCcchhcHHHHHHhhh
Q 032841 106 E--NDI--VSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~--~g~--~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ +|+ .+.++.|.. .+.|.++|+
T Consensus 100 ~~~~g~g~~~~~~~G~~---~~~l~~~l~ 125 (133)
T 3cxg_A 100 FNLNNEWVLVHTVEGAN---QNDIEKAFQ 125 (133)
T ss_dssp EEETTEEEEEEEEESCC---HHHHHHHHH
T ss_pred EecCCCeEEEEEEcCCC---HHHHHHHHH
Confidence 6 777 788888862 344555554
No 77
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.77 E-value=4.8e-19 Score=114.76 Aligned_cols=98 Identities=12% Similarity=0.261 Sum_probs=75.2
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-----CcEEEEEEeCCCcC
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-----DIALLQAYVGDRPT 80 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-----~~~~~~v~~~~~~~ 80 (132)
..++..+|++.+ ..++++++|+|||+ ||++|+.+.|.++++++++++ ++.++.||++...
T Consensus 10 ~~l~~~~f~~~v------~~~~~~vlv~f~a~--------wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~- 74 (121)
T 2djj_A 10 TVVVAKNYNEIV------LDDTKDVLIEFYAP--------WCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND- 74 (121)
T ss_dssp EECCTTTTTTSS------SCTTSCEEEEEECS--------SCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-
T ss_pred EEecccCHHHHh------hcCCCCEEEEEECC--------CCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-
Confidence 344445555542 13789999999998 999999999999999998875 7999999997754
Q ss_pred ccCCCCCccccccccccccceEEEEeCCeE--eEEecCcchhcHHHHHHhhhc
Q 032841 81 WRNPQHPFRVNSRFKLTGVPTLFRWENDIV--SGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~--~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++. +|+++||+++|++|+. +.++.|. ...+.|.+||++
T Consensus 75 ---------~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~--~~~~~l~~~i~~ 114 (121)
T 2djj_A 75 ---------VPD--EIQGFPTIKLYPAGAKGQPVTYSGS--RTVEDLIKFIAE 114 (121)
T ss_dssp ---------CSS--CCSSSSEEEEECSSCTTSCCCCCCC--SCHHHHHHHHHH
T ss_pred ---------ccc--ccCcCCeEEEEeCcCCCCceEecCC--CCHHHHHHHHHh
Confidence 444 9999999999998755 5666664 345567777653
No 78
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=8.2e-19 Score=124.53 Aligned_cols=86 Identities=13% Similarity=0.225 Sum_probs=73.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+|||+ ||++|+.+.|.++++++++++++.|+.||++... . ++.+|+|.++||++++
T Consensus 113 ~~~~vlv~F~a~--------wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~~ 175 (210)
T 3apq_A 113 SGELWFVNFYSP--------GCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDR---M------LCRMKGVNSYPSLFIF 175 (210)
T ss_dssp HSCCEEEEEECT--------TCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---H------HHHHTTCCSSSEEEEE
T ss_pred cCCcEEEEEeCC--------CChhHHHHHHHHHHHHHHhcCceEEEEEECCccH---H------HHHHcCCCcCCeEEEE
Confidence 688999999997 9999999999999999999878999999998765 2 7789999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+|+.+.++.|.. ..+.|.+||+
T Consensus 176 ~~G~~~~~~~G~~--~~~~l~~~i~ 198 (210)
T 3apq_A 176 RSGMAAVKYNGDR--SKESLVAFAM 198 (210)
T ss_dssp CTTSCCEECCSCC--CHHHHHHHHH
T ss_pred ECCCceeEecCCC--CHHHHHHHHH
Confidence 9999888888852 3344555543
No 79
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.75 E-value=1.6e-18 Score=113.32 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=59.9
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCcCccCCCCCccccccccccccceEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLF 103 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~ 103 (132)
+...++|+|||+ ||++|+.+.+.+...++... ..+.++.||++... .+. ++.+|+|.++||++
T Consensus 17 ~~~~~LV~F~A~--------wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~---~~~----la~~~~V~g~PT~i 81 (116)
T 3dml_A 17 KAELRLLMFEQP--------GCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPL---PPG----LELARPVTFTPTFV 81 (116)
T ss_dssp --CEEEEEEECT--------TCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCC---CTT----CBCSSCCCSSSEEE
T ss_pred cCCCEEEEEECC--------CCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCC---chh----HHHHCCCCCCCEEE
Confidence 456899999997 99999999986554433221 12678999998753 112 66789999999999
Q ss_pred EEeCCeEeEEecCcc
Q 032841 104 RWENDIVSGRLEDHE 118 (132)
Q Consensus 104 ~~~~g~~~~~~~~~~ 118 (132)
+|++|+++.|+.|..
T Consensus 82 ~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 82 LMAGDVESGRLEGYP 96 (116)
T ss_dssp EEETTEEEEEEECCC
T ss_pred EEECCEEEeeecCCC
Confidence 999999999999973
No 80
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=8.9e-19 Score=116.45 Aligned_cols=92 Identities=18% Similarity=0.307 Sum_probs=75.3
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcCcc
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPTWR 82 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 82 (132)
.+..++..+|++.+. + ..+++++|+|||+ ||++|+.+.|.++++++++.+ ++.|+.||+++..
T Consensus 8 ~v~~l~~~~f~~~~~---~--~~~~~vlv~f~a~--------wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~--- 71 (137)
T 2dj0_A 8 YIKYFNDKTIDEELE---R--DKRVTWIVEFFAN--------WSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT--- 71 (137)
T ss_dssp CCEECCTTHHHHHHH---H--STTSCEEEEECCT--------TCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---
T ss_pred eEEEccHhhHHHHHh---c--CCCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---
Confidence 445556666666542 2 2456999999997 999999999999999998874 7999999998755
Q ss_pred CCCCCcccccccccc------ccceEEEEeCCeEeEEecCc
Q 032841 83 NPQHPFRVNSRFKLT------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~------~vPt~~~~~~g~~~~~~~~~ 117 (132)
+ ++.+|+|. ++||+++|++|+.+.++.|.
T Consensus 72 ~------~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~ 106 (137)
T 2dj0_A 72 D------VSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQI 106 (137)
T ss_dssp H------HHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCB
T ss_pred H------HHHHccCcccCCcCCCCEEEEEECCEEEEEecCc
Confidence 2 66789998 99999999999999888876
No 81
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.74 E-value=2e-17 Score=118.79 Aligned_cols=87 Identities=11% Similarity=0.181 Sum_probs=74.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.+++++|+|||+ ||++|+.+.|.+.+++++++ ++.|+.||++ .. + ++.+|+|.++||+++|
T Consensus 119 ~~k~vvV~F~a~--------wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~---~------l~~~~~i~~~PTl~~~ 179 (217)
T 2trc_P 119 KVTTIVVNIYED--------GVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NT---G------AGDRFSSDVLPTLLVY 179 (217)
T ss_dssp TTCEEEEEEECT--------TSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HH---T------CSTTSCGGGCSEEEEE
T ss_pred CCcEEEEEEECC--------CCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cH---H------HHHHCCCCCCCEEEEE
Confidence 468999999997 99999999999999999996 8999999997 33 2 6678999999999999
Q ss_pred eCCeEeEEecCcch-----hcHHHHHHhhhc
Q 032841 106 ENDIVSGRLEDHEA-----HLEHKIKALLSA 131 (132)
Q Consensus 106 ~~g~~~~~~~~~~~-----~~~~~l~~~l~~ 131 (132)
++|+.+.++.|... ...+.|+.||..
T Consensus 180 ~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 180 KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 99999999998743 234678887764
No 82
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.74 E-value=3.9e-18 Score=122.18 Aligned_cols=99 Identities=21% Similarity=0.344 Sum_probs=78.0
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCC---cEEEEEEeCCCcCc
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDD---IALLQAYVGDRPTW 81 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~---~~~~~v~~~~~~~~ 81 (132)
++.++..+|++.+. ++++++|+|||+ ||++|+.+.|.+.++++++.+. +.++.||++...
T Consensus 17 v~~l~~~~~~~~~~-------~~~~v~v~F~a~--------wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-- 79 (241)
T 3idv_A 17 VLVLNDANFDNFVA-------DKDTVLLEFYAP--------WCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS-- 79 (241)
T ss_dssp EEEECTTTHHHHHT-------TCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH--
T ss_pred cEEecccCHHHHHh-------cCCeEEEEEECC--------CCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH--
Confidence 45566667777632 689999999997 9999999999999999877533 999999998765
Q ss_pred cCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|+++||++++++|+.+ ++.|. ...+.|.++++
T Consensus 80 -~------l~~~~~v~~~Pt~~~~~~g~~~-~~~g~--~~~~~l~~~i~ 118 (241)
T 3idv_A 80 -V------LASRFDVSGYPTIKILKKGQAV-DYEGS--RTQEEIVAKVR 118 (241)
T ss_dssp -H------HHHHTTCCSSSEEEEEETTEEE-ECCSC--SCHHHHHHHHH
T ss_pred -H------HHHhcCCCcCCEEEEEcCCCcc-cccCc--ccHHHHHHHHh
Confidence 2 7789999999999999999877 45554 33445555554
No 83
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.74 E-value=5.5e-18 Score=130.09 Aligned_cols=103 Identities=13% Similarity=0.364 Sum_probs=80.5
Q ss_pred CCccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC------CCCcEEEEEEe
Q 032841 2 PLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS------PDDIALLQAYV 75 (132)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~------~~~~~~~~v~~ 75 (132)
+.+++.++..+|++.+. ++++++|+|||+ ||++|+++.|.++++++.+ .+++.++.||+
T Consensus 4 ~~~v~~l~~~~f~~~~~-------~~~~vlV~F~a~--------wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~ 68 (382)
T 2r2j_A 4 GSEITSLDTENIDEILN-------NADVALVNFYAD--------WCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDC 68 (382)
T ss_dssp ----CBCCTTTHHHHHH-------HCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEET
T ss_pred CCceEECCHHHHHHHHh-------cCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEEC
Confidence 34567778888887643 578999999997 9999999999999998876 34599999999
Q ss_pred CCCcCccCCCCCccccccccccccceEEEEeCCeEeEE-ecCcchhcHHHHHHhhh
Q 032841 76 GDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGR-LEDHEAHLEHKIKALLS 130 (132)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~-~~~~~~~~~~~l~~~l~ 130 (132)
+... + ++.+|+|+++||+++|++|+.+.+ +.|. ...+.|.+|+.
T Consensus 69 ~~~~---~------l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~--~~~~~l~~~i~ 113 (382)
T 2r2j_A 69 DQHS---D------IAQRYRISKYPTLKLFRNGMMMKREYRGQ--RSVKALADYIR 113 (382)
T ss_dssp TTCH---H------HHHHTTCCEESEEEEEETTEEEEEECCSC--CSHHHHHHHHH
T ss_pred CccH---H------HHHhcCCCcCCEEEEEeCCcEeeeeecCc--chHHHHHHHHH
Confidence 8765 3 788999999999999999988774 6664 33456666664
No 84
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.73 E-value=1.1e-17 Score=108.56 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=77.7
Q ss_pred cccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCc
Q 032841 9 TVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPF 88 (132)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 88 (132)
.+.+-+++ +++++ ++++++|+|+|+ |||+|+.+.|.++++.+. .++.+++||+++.....+ .
T Consensus 10 ~i~s~e~f-~~ii~---~~~~vvi~khat--------wCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn-~--- 71 (112)
T 3iv4_A 10 KLSSIDQF-EQVIE---ENKYVFVLKHSE--------TCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSD-Y--- 71 (112)
T ss_dssp ECCSHHHH-HHHHH---HCSEEEEEEECT--------TCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHH-H---
T ss_pred ecCCHHHH-HHHHh---cCCCEEEEEECC--------cCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhH-H---
Confidence 44555665 44555 488999999999 999999999999999875 479999999987642110 1
Q ss_pred cccccccccc-cceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 89 RVNSRFKLTG-VPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 89 ~~~~~~~v~~-vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|++ .||+++|++|+.+++....... .+.|++.++
T Consensus 72 -IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~-~~~l~~~~e 112 (112)
T 3iv4_A 72 -IAKKTNVKHESPQAFYFVNGEMVWNRDHGDIN-VSSLAQAEE 112 (112)
T ss_dssp -HHHHHTCCCCSSEEEEEETTEEEEEEEGGGCS-HHHHHHHTC
T ss_pred -HHHHhCCccCCCeEEEEECCEEEEEeeccccC-HHHHHHhhC
Confidence 578999995 9999999999999987665443 335666553
No 85
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.1e-17 Score=125.09 Aligned_cols=106 Identities=16% Similarity=0.299 Sum_probs=81.9
Q ss_pred CccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCcc
Q 032841 3 LNLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWR 82 (132)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~ 82 (132)
-.++.++..+|++.+. +.+++++|+|||+ ||++|+.+.|.++++++++.+.+.++.|+++... ..
T Consensus 17 ~~vv~lt~~~f~~~i~------~~~~~vlV~F~A~--------wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~ 81 (298)
T 3ed3_A 17 PHISELTPKSFDKAIH------NTNYTSLVEFYAP--------WCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NK 81 (298)
T ss_dssp TTCEECCHHHHHHHHT------SSSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-TH
T ss_pred CCeEEeCHHHHHHHHH------hCCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CH
Confidence 4566777777777642 3688999999997 9999999999999999999877999999997422 01
Q ss_pred CCCCCccccccccccccceEEEEeCCeE-----------------eEEecCcchhcHHHHHHhhhc
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRWENDIV-----------------SGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~~~g~~-----------------~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+ ++.+|+|.++||+++|++|+. ..++.|. ...+.|.+|+..
T Consensus 82 ~------l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~--r~~~~i~~fl~~ 139 (298)
T 3ed3_A 82 A------LCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGA--RTLAPIVDFSLS 139 (298)
T ss_dssp H------HHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSC--CSHHHHHHHHHT
T ss_pred H------HHHhCCCCccceEEEEECCceeecccccccccccccccceeecCC--cCHHHHHHHHHH
Confidence 2 788999999999999999873 3445444 455667777653
No 86
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.58 E-value=2.4e-19 Score=112.89 Aligned_cols=86 Identities=22% Similarity=0.493 Sum_probs=72.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|.||++ |||+|+.+.|.++++.+++++++.++.+|++... . ++++|+|.++||++++
T Consensus 18 ~~~~~~v~f~~~--------~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 18 SDKPVLVDFWAP--------WCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP---N------TAAQYGIRSIPTLLLF 80 (106)
Confidence 688999999997 9999999999999999888777999999987755 2 6779999999999999
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. ..+.+.++|+
T Consensus 81 ~~g~~~~~~~g~~--~~~~l~~~l~ 103 (106)
T 2yj7_A 81 KNGQVVDRLVGAQ--PKEALKERID 103 (106)
Confidence 8898887777753 3445666654
No 87
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.73 E-value=3.9e-18 Score=117.21 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=71.2
Q ss_pred ccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCccC-
Q 032841 8 ATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWRN- 83 (132)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~~- 83 (132)
.+..+|++.++.... ++++++|+|||+ ||++|+.+.+.+ .++.+.+.+++.++.||+++......
T Consensus 31 ~~~~~~~~~~~~a~~---~gk~vlv~F~A~--------WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~ 99 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQ---HNKPVMLDFTGY--------GCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEP 99 (172)
T ss_dssp CCBSCHHHHHHHHHH---TTCCEEEEEECT--------TCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEE
T ss_pred cchhhHHHHHHHHHH---cCCeEEEEEECC--------CCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchh
Confidence 445677766543333 789999999998 999999984443 33443333368999999987542100
Q ss_pred ----C-CCCccc-----------cccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhh
Q 032841 84 ----P-QHPFRV-----------NSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 84 ----~-~~~~~~-----------~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
. .....+ +.+|+|.++||+++++ +|+.+.+..|... +.+.+.++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~-~~~~l~~~l 161 (172)
T 3f9u_A 100 VKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDE-DISKYINFL 161 (172)
T ss_dssp EEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCC-CHHHHHHHH
T ss_pred hhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCC-CHHHHHHHH
Confidence 0 000000 4679999999999995 6888888877642 133444444
No 88
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.72 E-value=2.3e-17 Score=100.40 Aligned_cols=80 Identities=21% Similarity=0.373 Sum_probs=65.8
Q ss_pred CeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeC
Q 032841 28 KANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEN 107 (132)
Q Consensus 28 ~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~ 107 (132)
.+.++.||++ |||+|+.+.|.++++.+++++++.++.+|+++.. + ++.+|+|.++||+++ +
T Consensus 3 ~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~--~ 63 (85)
T 1fo5_A 3 KVKIELFTSP--------MCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP---Q------KAMEYGIMAVPTIVI--N 63 (85)
T ss_dssp CEEEEEEECC--------CSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC---C------TTTSTTTCCSSEEEE--T
T ss_pred ceEEEEEeCC--------CCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH---H------HHHHCCCcccCEEEE--C
Confidence 4678999997 9999999999999999999878999999998755 2 677999999999988 7
Q ss_pred CeEeEEecCcchhcHHHHHHhhh
Q 032841 108 DIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 108 g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
|+. ++.|. ...+.|.++|+
T Consensus 64 G~~--~~~G~--~~~~~l~~~l~ 82 (85)
T 1fo5_A 64 GDV--EFIGA--PTKEALVEAIK 82 (85)
T ss_dssp TEE--ECCSS--SSSHHHHHHHH
T ss_pred CEE--eeecC--CCHHHHHHHHH
Confidence 765 66665 23445666664
No 89
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.72 E-value=1.4e-17 Score=115.16 Aligned_cols=75 Identities=16% Similarity=0.283 Sum_probs=62.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccccccc---ccccceE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFK---LTGVPTL 102 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---v~~vPt~ 102 (132)
.+++++|.|||+ |||||+.+.|.++++++.++ ++.++.||+++.+ + ++.+|. +.++||+
T Consensus 53 ~~k~vvv~F~A~--------WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~---~------~~~~~~~~~v~~iPt~ 114 (167)
T 1z6n_A 53 ERRYRLLVAGEM--------WCPDCQINLAALDFAQRLQP-NIELAIISKGRAE---D------DLRQRLALERIAIPLV 114 (167)
T ss_dssp CSCEEEEEECCT--------TCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHH---H------HTTTTTTCSSCCSSEE
T ss_pred CCCEEEEEEECC--------CChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCH---H------HHHHHHHcCCCCcCeE
Confidence 578999999998 99999999999999998886 7999999987654 2 445565 9999999
Q ss_pred EEEeC-CeEeEEecCcc
Q 032841 103 FRWEN-DIVSGRLEDHE 118 (132)
Q Consensus 103 ~~~~~-g~~~~~~~~~~ 118 (132)
+++++ |+.+.++.+..
T Consensus 115 i~~~~~G~~~~~~g~~p 131 (167)
T 1z6n_A 115 LVLDEEFNLLGRFVERP 131 (167)
T ss_dssp EEECTTCCEEEEEESSC
T ss_pred EEECCCCCEEEEEcCCC
Confidence 99997 47777775543
No 90
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.71 E-value=1.2e-17 Score=113.44 Aligned_cols=95 Identities=16% Similarity=0.262 Sum_probs=67.6
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCccCC--CCCcccccccccccc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWRNP--QHPFRVNSRFKLTGV 99 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~v~~v 99 (132)
.+++++|+|| |+ ||++|+.+.|.+ .++.+.+..++.++.+|++....+..+ ...-.++.+|+|.++
T Consensus 46 ~gk~vlv~F~ga~--------wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~ 117 (154)
T 2ju5_A 46 DHKPIGLFFTGSD--------WCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF 117 (154)
T ss_dssp HCCCEEEEEECTT--------TCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS
T ss_pred CCCeEEEEEeCCC--------CCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC
Confidence 6899999999 87 999999999999 777655545789999998764310000 000015678999999
Q ss_pred ceEEEE-eCCeEeEEecCcchhcHHHHHHhh
Q 032841 100 PTLFRW-ENDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 100 Pt~~~~-~~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
||++++ .+|+.+.+. |......+.+.++|
T Consensus 118 Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l 147 (154)
T 2ju5_A 118 PELVFIDAEGKQLARM-GFEPGGGAAYVSKV 147 (154)
T ss_dssp SEEEEECTTCCEEEEE-CCCTTCHHHHHHHH
T ss_pred CEEEEEcCCCCEEEEe-cCCCCCHHHHHHHH
Confidence 999999 578888888 76522344444444
No 91
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.71 E-value=2.2e-17 Score=129.58 Aligned_cols=104 Identities=16% Similarity=0.293 Sum_probs=84.1
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRN 83 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 83 (132)
+++.++..+|++.+. ....+++++|+|||+ ||++|+++.|.++++++.+.+.+.++.||++... +
T Consensus 2 ~v~~l~~~~f~~~i~----~~~~~~~~lv~F~a~--------wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~ 66 (481)
T 3f8u_A 2 DVLELTDDNFESRIS----DTGSAGLMLVEFFAP--------WCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANT---N 66 (481)
T ss_dssp CCEEECTTTHHHHTT----CCSSSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCH---H
T ss_pred ceEEecHHHHHHHHH----hCCCCCeEEEEEECC--------CCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCH---H
Confidence 456677778887632 112338999999997 9999999999999999999877999999998865 3
Q ss_pred CCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||+++|++|+.+.++.|. ...+.|.+|+.
T Consensus 67 ------l~~~~~v~~~Ptl~~~~~g~~~~~~~G~--~~~~~l~~~~~ 105 (481)
T 3f8u_A 67 ------TCNKYGVSGYPTLKIFRDGEEAGAYDGP--RTADGIVSHLK 105 (481)
T ss_dssp ------HHHHTTCCEESEEEEEETTEEEEECCSC--SSHHHHHHHHH
T ss_pred ------HHHhcCCCCCCEEEEEeCCceeeeecCc--cCHHHHHHHHH
Confidence 7889999999999999999888888875 33455666654
No 92
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.71 E-value=1.3e-17 Score=110.54 Aligned_cols=89 Identities=24% Similarity=0.350 Sum_probs=69.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTL 102 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~ 102 (132)
.+++++|+|||+ ||++|+.+.|.+ .++.+.++ ++.++.||++.... ..-.++.+|+|.++||+
T Consensus 30 ~~k~vlv~F~a~--------wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~-----~~~~l~~~~~v~~~Pt~ 95 (134)
T 2fwh_A 30 KGKPVMLDLYAD--------WCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDA-----QDVALLKHLNVLGLPTI 95 (134)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCH-----HHHHHHHHTTCCSSSEE
T ss_pred cCCcEEEEEECC--------CCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcc-----hHHHHHHHcCCCCCCEE
Confidence 478999999997 999999999999 88888887 59999999965320 00116778999999999
Q ss_pred EEE-eCCeEe--EEecCcchhcHHHHHHhhh
Q 032841 103 FRW-ENDIVS--GRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 103 ~~~-~~g~~~--~~~~~~~~~~~~~l~~~l~ 130 (132)
+++ .+|+.+ .++.|.. ..+.|.++|+
T Consensus 96 ~~~d~~G~~v~~~~~~G~~--~~~~l~~~l~ 124 (134)
T 2fwh_A 96 LFFDGQGQEHPQARVTGFM--DAETFSAHLR 124 (134)
T ss_dssp EEECTTSCBCGGGCBCSCC--CHHHHHHHHH
T ss_pred EEECCCCCEeeeeeeeecc--CHHHHHHHHH
Confidence 999 578776 5777753 3456666665
No 93
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=7.3e-18 Score=110.50 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=75.6
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCcc
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWR 82 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~ 82 (132)
+..+..+|++.+..... ++++++|+|||+ ||++|+.+.|.+ ..+.+.+..++.++.+|++... ..
T Consensus 9 ~~~~~~~~~~~~~~~~~---~~k~vlv~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~ 76 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEV---EDKLLFVDCFTT--------WCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GV 76 (130)
T ss_dssp CCCBCCCHHHHHHHHHH---HSSCEEEEECCT--------TCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HH
T ss_pred CCcccCCHHHHHHHHHh---cCCeEEEEEECC--------CCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hH
Confidence 34456678776543222 578999999997 999999999998 6666555456888888886411 01
Q ss_pred CCCCCccccccccccccceEEEE-eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRW-ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~-~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
. ++.+|+|.++||++++ .+|+.+.++.|.. ..+.|.++|+
T Consensus 77 ~------~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~--~~~~l~~~l~ 117 (130)
T 2kuc_A 77 E------LRKKYGVHAYPTLLFINSSGEVVYRLVGAE--DAPELLKKVK 117 (130)
T ss_dssp H------HHHHTTCCSSCEEEEECTTSCEEEEEESCC--CHHHHHHHHH
T ss_pred H------HHHHcCCCCCCEEEEECCCCcEEEEecCCC--CHHHHHHHHH
Confidence 2 6778999999999999 4788888888863 2334555543
No 94
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.71 E-value=9.4e-19 Score=114.55 Aligned_cols=87 Identities=20% Similarity=0.384 Sum_probs=71.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
++++++|+||++ ||++|+.+.|.++++.++++ ++.++.||++... . ++.+|+|.++||++++
T Consensus 35 ~~~~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~------~~~~~~v~~~Pt~~~~ 96 (130)
T 1wmj_A 35 AGKVVIIDFTAS--------WCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELK---E------VAEKYNVEAMPTFLFI 96 (130)
T ss_dssp TTCBCBEECCSS--------SCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSG---G------GHHHHTCCSSCCCCBC
T ss_pred cCCEEEEEEECC--------CChhHHHHHHHHHHHHHHCC-CCEEEEEeccchH---H------HHHHcCCCccceEEEE
Confidence 688999999997 99999999999999999987 7999999987754 2 6778999999999999
Q ss_pred eCCeEeEEecCcc-hhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHE-AHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~-~~~~~~l~~~l~ 130 (132)
++|+.+.++.|.. ....+.|+++++
T Consensus 97 ~~g~~~~~~~g~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 97 KDGAEADKVVGARKDDLQNTIVKHVG 122 (130)
T ss_dssp TTTTCCBCCCTTCTTTHHHHHHHHTS
T ss_pred eCCeEEEEEeCCCHHHHHHHHHHHHh
Confidence 9999888888752 233444554443
No 95
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=119.62 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=66.9
Q ss_pred ccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC---CcEEEEEEeCCCcCcc
Q 032841 6 SDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD---DIALLQAYVGDRPTWR 82 (132)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~---~~~~~~v~~~~~~~~~ 82 (132)
..++..+|++.+ . .++++++|+|||+ ||++|+++.|.++++++++++ .+.++.||++... ..
T Consensus 15 ~~l~~~~f~~~i---~---~~~~~vlv~F~a~--------wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~ 79 (244)
T 3q6o_A 15 TLLQADTVRGAV---L---GSRSAWAVEFFAS--------WCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET-NS 79 (244)
T ss_dssp EEECTTTHHHHH---S---SCSSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT-TH
T ss_pred eeCChhhHHHHH---h---hCCCeEEEEEECC--------cCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh-hH
Confidence 345556666653 2 3679999999998 999999999999999999875 7999999985322 01
Q ss_pred CCCCCccccccccccccceEEEEeCCeE
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
+ ++.+|+|.++||+++|++|+.
T Consensus 80 ~------l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 80 A------VCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp H------HHHHTTCCSSSEEEEECTTCC
T ss_pred H------HHHHcCCCccCEEEEEeCCCc
Confidence 2 778999999999999998544
No 96
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.70 E-value=3.1e-17 Score=117.49 Aligned_cols=100 Identities=20% Similarity=0.323 Sum_probs=78.7
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC---CcEEEEEEeCCCcCc
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD---DIALLQAYVGDRPTW 81 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~---~~~~~~v~~~~~~~~ 81 (132)
....+..+|++.+. .+++++|+|||+ ||++|+.+.|.+.++++++.+ ++.++.||++...
T Consensus 132 ~~~~~~~~~~~~~~-------~~~~~~v~f~a~--------wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~-- 194 (241)
T 3idv_A 132 TLVLTKENFDEVVN-------DADIILVEFYAP--------WCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET-- 194 (241)
T ss_dssp SEECCTTTHHHHHH-------HCSEEEEEEECT--------TCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH--
T ss_pred ceeccHHHHHHhhc-------cCCeEEEEEECC--------CCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH--
Confidence 34455566666543 568999999997 999999999999999887643 4999999998765
Q ss_pred cCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+ ++.+|+|+++||+++|++|+.+. +.|. ...+.|.+||.+
T Consensus 195 -~------l~~~~~v~~~Pt~~~~~~g~~~~-~~g~--~~~~~l~~~l~~ 234 (241)
T 3idv_A 195 -D------LAKRFDVSGYPTLKIFRKGRPYD-YNGP--REKYGIVDYMIE 234 (241)
T ss_dssp -H------HHHHTTCCSSSEEEEEETTEEEE-CCSC--CSHHHHHHHHHH
T ss_pred -H------HHHHcCCcccCEEEEEECCeEEE-ecCC--CCHHHHHHHHHh
Confidence 3 77899999999999999998765 5553 456667777753
No 97
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.70 E-value=5e-17 Score=128.39 Aligned_cols=101 Identities=21% Similarity=0.355 Sum_probs=82.9
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcCcc
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPTWR 82 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 82 (132)
.++.++..+|++.+. ++++++|+|||+ ||++|+.+.|.++++++.+.+ ++.++.||++...
T Consensus 15 ~v~~l~~~~f~~~~~-------~~~~~lv~F~a~--------wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~--- 76 (504)
T 2b5e_A 15 AVVKLATDSFNEYIQ-------SHDLVLAEFFAP--------WCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ--- 76 (504)
T ss_dssp SCEECCTTTHHHHHT-------TCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH---
T ss_pred CcEECCHHHHHHHHh-------cCCeEEEEEECC--------CCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH---
Confidence 355667778887642 689999999997 999999999999999999986 5999999998765
Q ss_pred CCCCCccccccccccccceEEEEeCCeE--eEEecCcchhcHHHHHHhhh
Q 032841 83 NPQHPFRVNSRFKLTGVPTLFRWENDIV--SGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 83 ~~~~~~~~~~~~~v~~vPt~~~~~~g~~--~~~~~~~~~~~~~~l~~~l~ 130 (132)
+ ++.+|+|+++||+++|++|+. ..++.|. ...+.|.+|+.
T Consensus 77 ~------l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~--~~~~~l~~~l~ 118 (504)
T 2b5e_A 77 D------LCMEHNIPGFPSLKIFKNSDVNNSIDYEGP--RTAEAIVQFMI 118 (504)
T ss_dssp H------HHHHTTCCSSSEEEEEETTCTTCEEECCSC--CSHHHHHHHHH
T ss_pred H------HHHhcCCCcCCEEEEEeCCccccceeecCC--CCHHHHHHHHH
Confidence 3 788999999999999999986 7777775 33455666654
No 98
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.68 E-value=2.7e-17 Score=100.11 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=63.2
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
..++.||++ |||+|+.+.|.++++.+++++++.++.+|+++.. + ++.+|+|.++||+++ +|
T Consensus 3 ~~vv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~--~G 63 (85)
T 1nho_A 3 VNIEVFTSP--------TCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR---E------KAIEYGLMAVPAIAI--NG 63 (85)
T ss_dssp CCEEEESCS--------SSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG---G------GGGGTCSSCSSEEEE--TT
T ss_pred EEEEEEECC--------CCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH---H------HHHhCCceeeCEEEE--CC
Confidence 358899997 9999999999999999988878999999998765 2 677999999999998 77
Q ss_pred eEeEEecCcchhcHHHHHHhhh
Q 032841 109 IVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+. ++.|.. ..+.|.++|+
T Consensus 64 ~~--~~~G~~--~~~~l~~~l~ 81 (85)
T 1nho_A 64 VV--RFVGAP--SREELFEAIN 81 (85)
T ss_dssp TE--EEECSS--CCHHHHHHHH
T ss_pred EE--EEccCC--CHHHHHHHHH
Confidence 65 666752 2334555543
No 99
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.68 E-value=8.4e-17 Score=114.57 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=71.0
Q ss_pred CCCeE-EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC----CCcEEEEEEeCCCcCccCCCCCccccccccccccc
Q 032841 26 KNKAN-FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP----DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVP 100 (132)
Q Consensus 26 ~~~~v-~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vP 100 (132)
.++++ +|.|||+ ||++|+.+.|.+++++++++ +++.++.||++... + ++.+|+|.++|
T Consensus 132 ~~~~~~~v~F~a~--------wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~P 194 (226)
T 1a8l_A 132 IDQDVRILVFVTP--------TCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP---E------WADQYNVMAVP 194 (226)
T ss_dssp CCSCEEEEEEECS--------SCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH---H------HHHHTTCCSSC
T ss_pred cCCCcEEEEEeCC--------CCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH---H------HHHhCCCcccC
Confidence 45566 9999997 99999999999999998875 58999999998755 2 67899999999
Q ss_pred eEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 101 TLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 101 t~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
|++++++|+.+.++.|... .+.|.++|+
T Consensus 195 t~~~~~~G~~~~~~~G~~~--~~~l~~~l~ 222 (226)
T 1a8l_A 195 KIVIQVNGEDRVEFEGAYP--EKMFLEKLL 222 (226)
T ss_dssp EEEEEETTEEEEEEESCCC--HHHHHHHHH
T ss_pred eEEEEeCCceeEEEcCCCC--HHHHHHHHH
Confidence 9999999998888888632 335555554
No 100
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.68 E-value=5.1e-17 Score=110.76 Aligned_cols=87 Identities=8% Similarity=0.065 Sum_probs=64.9
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHH--HhCCCCcEEEEEEeCCCcCccCCCCCc
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTL--EASPDDIALLQAYVGDRPTWRNPQHPF 88 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~ 88 (132)
.++++.++...+ ++++++|+|||+ ||++|+.+.|.+.+.. ..+. +..|+.|+++... .+
T Consensus 31 ~~~~~al~~A~~---~~KpVlV~F~A~--------WC~~Ck~m~p~~~~~~~~~~~~-~~~fv~V~vD~e~--~~----- 91 (151)
T 3ph9_A 31 QTYEEGLFYAQK---SKKPLMVIHHLE--------DCQYSQALKKVFAQNEEIQEMA-QNKFIMLNLMHET--TD----- 91 (151)
T ss_dssp SSHHHHHHHHHH---HTCCEEEEECCT--------TCHHHHHHHHHHHHCHHHHHHH-HHTCEEEEESSCC--SC-----
T ss_pred hCHHHHHHHHHH---cCCcEEEEEECC--------CCHhHHHHHHHHhcCHHHHHHh-hcCeEEEEecCCc--hh-----
Confidence 466776554444 789999999998 9999999999998632 1221 2346777776322 01
Q ss_pred cccccccccccceEEEEe-CCeEeEEecCc
Q 032841 89 RVNSRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
++.++++.++||+++++ +|+++.++.|.
T Consensus 92 -~~~~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 92 -KNLSPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp -GGGCTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred -hHhhcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 45689999999999999 89999898886
No 101
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.68 E-value=1.4e-16 Score=105.69 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=73.6
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCC
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQH 86 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 86 (132)
..+..+|++++ + ++.+++|+|||+ |++|+.+.|.++++++++.+++.|+.+|+++.. .
T Consensus 10 ~~t~~~f~~~~----~---~~~pv~v~f~a~---------~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~---~--- 67 (133)
T 2djk_A 10 EIGPETYSDYM----S---AGIPLAYIFAET---------AEERKELSDKLKPIAEAQRGVINFGTIDAKAFG---A--- 67 (133)
T ss_dssp ECCHHHHHHHH----H---TTSCEEEEECSC---------SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTG---G---
T ss_pred ccChHHHHHHh----c---CCCCEEEEEecC---------hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhH---H---
Confidence 34555665543 2 678999999994 689999999999999999888999999998765 3
Q ss_pred Cccccccccccc--cceEEEEeC--CeEeEEecCcchhcHHHHHHhhh
Q 032841 87 PFRVNSRFKLTG--VPTLFRWEN--DIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 87 ~~~~~~~~~v~~--vPt~~~~~~--g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++..|||++ +||++++++ |+. .++...+....+.|++||+
T Consensus 68 ---~a~~~gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~ 111 (133)
T 2djk_A 68 ---HAGNLNLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVD 111 (133)
T ss_dssp ---GTTTTTCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHH
T ss_pred ---HHHHcCCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHH
Confidence 778999999 999999986 554 4554112233445555554
No 102
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.50 E-value=3.3e-18 Score=112.32 Aligned_cols=78 Identities=15% Similarity=0.333 Sum_probs=64.3
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccce
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPT 101 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt 101 (132)
.++++++|+|||+ ||++|+.+.|.+ .++.+.+++++.++.||++... .+. ++.+|+|.++||
T Consensus 17 ~~~k~vlv~f~a~--------wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~----~~~~~~v~~~Pt 81 (130)
T 2lst_A 17 AHGRMVMVYFHSE--------HCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPE---GQE----LARRYRVPGTPT 81 (130)
Confidence 4789999999998 999999999999 8888877767899999985322 111 677999999999
Q ss_pred EEEE--eCCeE--eEEecCc
Q 032841 102 LFRW--ENDIV--SGRLEDH 117 (132)
Q Consensus 102 ~~~~--~~g~~--~~~~~~~ 117 (132)
++++ ++|+. +.++.|.
T Consensus 82 ~~~~d~~~G~~~~~~~~~G~ 101 (130)
T 2lst_A 82 FVFLVPKAGAWEEVGRLFGS 101 (130)
Confidence 9999 56877 7788775
No 103
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.66 E-value=2.8e-17 Score=112.91 Aligned_cols=88 Identities=11% Similarity=0.238 Sum_probs=65.1
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccc
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRV 90 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 90 (132)
.++++.++.... ++++++|+|||+ ||++|+.+.|.+.++.+.+..++.|+.|+++.... . +
T Consensus 33 ~~~~~~~~~~~~---~~k~vlv~F~a~--------WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~--~------~ 93 (164)
T 1sen_A 33 RTLEDGKKEAAA---SGLPLMVIIHKS--------WCGACKALKPKFAESTEISELSHNFVMVNLEDEEE--P------K 93 (164)
T ss_dssp CCHHHHHHHHHH---HTCCEEEEEECT--------TCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGS--C------S
T ss_pred cCHHHHHHHHHh---cCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCch--H------H
Confidence 456655444433 689999999998 99999999999999765443346777888866441 0 2
Q ss_pred cccccc--cccceEEEE-eCCeEeEEecCc
Q 032841 91 NSRFKL--TGVPTLFRW-ENDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v--~~vPt~~~~-~~g~~~~~~~~~ 117 (132)
+..|++ .++||++++ .+|+.+.++.|.
T Consensus 94 ~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 94 DEDFSPDGGYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp CGGGCTTCSCSSEEEEECTTSCBCTTCCCT
T ss_pred HHHhcccCCcCCeEEEECCCCCEEEEEeCC
Confidence 346776 679999999 578888888775
No 104
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.66 E-value=4.2e-16 Score=122.30 Aligned_cols=96 Identities=22% Similarity=0.380 Sum_probs=76.4
Q ss_pred cccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEEEeCCCcCccCCCC
Q 032841 9 TVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQAYVGDRPTWRNPQH 86 (132)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 86 (132)
+..+|++.+. .++++++|+|||+ ||++|+.+.|.++++++.+.+ ++.++.+|++...
T Consensus 358 ~~~~~~~~~~------~~~k~vlv~f~a~--------wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~------- 416 (481)
T 3f8u_A 358 VAENFDEIVN------NENKDVLIEFYAP--------WCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAND------- 416 (481)
T ss_dssp CTTTHHHHHT------CTTCEEEEEEECT--------TBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSC-------
T ss_pred cccCHHHHhh------cCCCcEEEEEecC--------cChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchh-------
Confidence 3446665532 3689999999997 999999999999999999874 6899999987753
Q ss_pred CccccccccccccceEEEEeCCeE--eEEecCcchhcHHHHHHhhh
Q 032841 87 PFRVNSRFKLTGVPTLFRWENDIV--SGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~~g~~--~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|.++||+++|++|+. ..++.|. ...+.|.+||+
T Consensus 417 ---~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~--~~~~~l~~~l~ 457 (481)
T 3f8u_A 417 ---VPSPYEVRGFPTIYFSPANKKLNPKKYEGG--RELSDFISYLQ 457 (481)
T ss_dssp ---CCTTCCCCSSSEEEEECTTCTTSCEECCSC--CSHHHHHHHHH
T ss_pred ---hHhhCCCcccCEEEEEeCCCeEeeeEeCCC--CCHHHHHHHHH
Confidence 667899999999999998876 5667665 34556667765
No 105
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.66 E-value=5.4e-16 Score=102.72 Aligned_cols=97 Identities=14% Similarity=0.257 Sum_probs=71.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC------ccC------------CCCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT------WRN------------PQHP 87 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~------~~~------------~~~~ 87 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++++.++.|+++.... ++. ....
T Consensus 28 ~gk~~lv~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 99 (148)
T 2b5x_A 28 GEKPTLIHFWSI--------SCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSD 99 (148)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSS
T ss_pred CCCEEEEEEEcC--------CCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCc
Confidence 678999999998 99999999999999999887569999999865220 000 0111
Q ss_pred ccccccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 88 FRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 88 ~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
..++..|+|.++||+++++ +|+.+.+..|.. ....+.|+++++
T Consensus 100 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 100 HALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp CHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred hhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 1256789999999999995 788888887752 234455555554
No 106
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.65 E-value=4.5e-16 Score=128.48 Aligned_cols=100 Identities=11% Similarity=0.146 Sum_probs=74.2
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 84 (132)
++.++..+|++.+ .++++++|+|||+ ||++|+.+.|.++++++.+.+.+.++.||++... +
T Consensus 118 v~~l~~~~f~~~i-------~~~~~~lv~Fya~--------wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~- 178 (780)
T 3apo_A 118 IITLERREFDAAV-------NSGELWFVNFYSP--------GSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDR---M- 178 (780)
T ss_dssp EEECCHHHHHHHH-------TSSSCEEEEEECS--------SCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCS---S-
T ss_pred eeeechHhHHhhh-------cCCCcEEEEEeCC--------CCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcH---H-
Confidence 3445555555553 2789999999997 9999999999999999998877999999998765 3
Q ss_pred CCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.+|+|+++||+++|++|+.+.++.|.. ..+.|.+|+.
T Consensus 179 -----l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~--~~~~l~~~l~ 217 (780)
T 3apo_A 179 -----LCRMKGVNSYPSLFIFRSGMAAVKYNGDR--SKESLVAFAM 217 (780)
T ss_dssp -----CC--------CEEEEECTTSCCEECCSCS--CHHHHHHHHH
T ss_pred -----HHHHcCCceeeeEEEEeCCcEeeEecCCC--CHHHHHHHHH
Confidence 78899999999999999998888888763 3456767665
No 107
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.64 E-value=2.2e-16 Score=119.72 Aligned_cols=99 Identities=10% Similarity=0.137 Sum_probs=77.3
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHH-------HHHHHHhCCC-CcEEEEEEeC
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPV-------IYKTLEASPD-DIALLQAYVG 76 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~-------~~~~~~~~~~-~~~~~~v~~~ 76 (132)
++.++..+|++.+. ++++++|+|||+ ||+ |+.+.|. ++++++.+.+ ++.++.||++
T Consensus 13 v~~l~~~~f~~~i~-------~~~~~lV~F~a~--------wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~ 76 (350)
T 1sji_A 13 VVSLTEKNFKQVLK-------KYDVLCLYYHES--------VSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAK 76 (350)
T ss_dssp CEEECHHHHHHHHT-------TCSEEEEEEECC--------SCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETT
T ss_pred cEECCHHHHHHHHh-------hCCeEEEEEECC--------CCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCC
Confidence 44555556666532 678999999997 999 9999888 8888888764 6999999998
Q ss_pred CCcCccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 77 DRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
... + ++.+|+|+++||+++|++|+ ..++.|. ...+.|.+|+..
T Consensus 77 ~~~---~------l~~~~~v~~~Pt~~~~~~g~-~~~~~G~--~~~~~l~~~i~~ 119 (350)
T 1sji_A 77 KEA---K------LAKKLGFDEEGSLYVLKGDR-TIEFDGE--FAADVLVEFLLD 119 (350)
T ss_dssp TTH---H------HHHHHTCCSTTEEEEEETTE-EEEECSC--CCHHHHHHHHHT
T ss_pred CCH---H------HHHhcCCCccceEEEEECCc-EEEecCC--CCHHHHHHHHHH
Confidence 765 3 78899999999999999998 4567765 345567777653
No 108
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.64 E-value=9.2e-16 Score=101.26 Aligned_cols=95 Identities=16% Similarity=0.353 Sum_probs=72.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc----CccC----C--------CCCc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP----TWRN----P--------QHPF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~----~~~~----~--------~~~~ 88 (132)
.+++++|+||++ ||++|+.+.|.+.++.++++ .++.++.|+++... .++. . ...-
T Consensus 33 ~gk~~ll~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 104 (145)
T 3erw_A 33 KGQKTILHFWTS--------WCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKG 104 (145)
T ss_dssp TTSEEEEEEECS--------SCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSS
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCch
Confidence 689999999998 99999999999999999997 67999999986421 0000 0 0011
Q ss_pred cccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 89 RVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.++..|+|.++||+++++ +|+.+.++.|. ...+.|+++|+
T Consensus 105 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~--~~~~~l~~~l~ 145 (145)
T 3erw_A 105 ELMKEYHIITIPTSFLLNEKGEIEKTKIGP--MTAEQLKEWTE 145 (145)
T ss_dssp HHHHHTTCCEESEEEEECTTCCEEEEEESC--CCHHHHHHHHC
T ss_pred hHHHhcCcCccCeEEEEcCCCcEEEEEcCC--cCHHHHHHhhC
Confidence 256789999999999995 68888888776 34567777764
No 109
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.64 E-value=1.7e-15 Score=114.88 Aligned_cols=98 Identities=20% Similarity=0.284 Sum_probs=77.0
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEEEeCCCcCccCC
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQAYVGDRPTWRNP 84 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 84 (132)
.++..+|++.+ + .++++++|+|||+ ||++|+++.|.++++++.+.+ ++.++.+|.+...
T Consensus 253 ~l~~~~f~~~~---~---~~~k~~lv~f~a~--------wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~----- 313 (361)
T 3uem_A 253 VLVGKNFEDVA---F---DEKKNVFVEFYAP--------WCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE----- 313 (361)
T ss_dssp EECTTTHHHHH---T---CTTCEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-----
T ss_pred EeecCchhhhc---c---cCCCcEEEEEecC--------cCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-----
Confidence 34455666653 2 3689999999997 999999999999999999874 4888888886643
Q ss_pred CCCccccccccccccceEEEEeCC--eEeEEecCcchhcHHHHHHhhhc
Q 032841 85 QHPFRVNSRFKLTGVPTLFRWEND--IVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 85 ~~~~~~~~~~~v~~vPt~~~~~~g--~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+.+|+|.++||+++|.+| +...++.|. ...+.|.+||++
T Consensus 314 ------~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~--~~~~~l~~~l~~ 354 (361)
T 3uem_A 314 ------VEAVKVHSFPTLKFFPASADRTVIDYNGE--RTLDGFKKFLES 354 (361)
T ss_dssp ------CSSCCCCSSSEEEEECSSSSCCCEECCSC--SSHHHHHHHHTT
T ss_pred ------hhhcCCcccCeEEEEECCCCcceeEecCC--CCHHHHHHHHHh
Confidence 358999999999999654 456677774 556788888875
No 110
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.63 E-value=5.3e-16 Score=118.69 Aligned_cols=100 Identities=13% Similarity=0.188 Sum_probs=78.7
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhh------HHHHHHHHhCCC-CcEEEEEEeC
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAE------PVIYKTLEASPD-DIALLQAYVG 76 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~------p~~~~~~~~~~~-~~~~~~v~~~ 76 (132)
.++.++..+|++++. ++++++|+|||+ ||++|+... |.++++++.+.+ ++.++.||++
T Consensus 14 ~v~~lt~~~f~~~i~-------~~~~vlV~FyAp--------WC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~ 78 (367)
T 3us3_A 14 RVINVNAKNYKNVFK-------KYEVLALLYHEP--------PEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSE 78 (367)
T ss_dssp CCEECCTTTHHHHHH-------HCSEEEEEEECC--------CCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETT
T ss_pred ccEECCHHHHHHHHh-------hCCeEEEEEECC--------CchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCc
Confidence 466778888988754 578999999997 999974443 688888887754 6999999998
Q ss_pred CCcCccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 77 DRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
... + ++.+|+|+++||+++|++|+.+ ++.|. ...+.|.+|+.
T Consensus 79 ~~~---~------l~~~~~V~~~PTl~~f~~G~~~-~y~G~--~~~~~i~~~i~ 120 (367)
T 3us3_A 79 KDA---A------VAKKLGLTEEDSIYVFKEDEVI-EYDGE--FSADTLVEFLL 120 (367)
T ss_dssp TTH---H------HHHHHTCCSTTEEEEEETTEEE-ECCSC--CSHHHHHHHHH
T ss_pred ccH---H------HHHHcCCCcCceEEEEECCcEE-EeCCC--CCHHHHHHHHH
Confidence 865 3 8899999999999999999764 56664 34556666664
No 111
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.63 E-value=4.2e-16 Score=103.39 Aligned_cols=97 Identities=18% Similarity=0.291 Sum_probs=71.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC-CC-CcEEEEEEeCCCc-Ccc--------------CCC-CC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS-PD-DIALLQAYVGDRP-TWR--------------NPQ-HP 87 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~-~~-~~~~~~v~~~~~~-~~~--------------~~~-~~ 87 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++ .+ ++.++.|+++... .|+ ++. ..
T Consensus 32 ~gk~vll~F~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 103 (148)
T 3fkf_A 32 RNRYLLLNFWAS--------WCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLS 103 (148)
T ss_dssp TTSEEEEEEECG--------GGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG
T ss_pred CCcEEEEEEECC--------CCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcc
Confidence 689999999998 9999999999999999998 64 5999999987643 110 000 01
Q ss_pred ccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhhc
Q 032841 88 FRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 88 ~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
..++..|+|.++||+++++ +|+.+.+.. ......+.|++++++
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~-~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 104 SETAKQYAILTLPTNILLSPTGKILARDI-QGEALTGKLKELLKT 147 (148)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEEEESC-CHHHHHHHHHHHC--
T ss_pred hHHHHhcCCCCcCEEEEECCCCeEEEecC-CHHHHHHHHHHHHcc
Confidence 1256789999999999995 687777766 333445666666654
No 112
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.62 E-value=5.7e-15 Score=99.40 Aligned_cols=97 Identities=14% Similarity=0.212 Sum_probs=70.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHh-hhHHHHHHHHhCCC-CcEEEEEEeCC-------CcCc--------------c
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVR-AEPVIYKTLEASPD-DIALLQAYVGD-------RPTW--------------R 82 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~-~~p~~~~~~~~~~~-~~~~~~v~~~~-------~~~~--------------~ 82 (132)
.|++++|+|||+ ||++|+. +.|.+.++.+++++ ++.++.|+++. ...+ .
T Consensus 29 ~gk~vlv~F~a~--------~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (160)
T 3lor_A 29 RGKVVVVEVFQM--------LCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAV 100 (160)
T ss_dssp TTSEEEEEEECT--------TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEEEEcC--------CCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEE
Confidence 689999999998 9999999 59999999999974 59999999741 1100 0
Q ss_pred CCCCC---c-cccccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 83 NPQHP---F-RVNSRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 83 ~~~~~---~-~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
+.... . .++..|+|.++||+++++ +|+.+.++.|.. ....+.|+++|+
T Consensus 101 d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 101 DMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp ECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 11110 0 145689999999999997 688888888762 234455665554
No 113
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.62 E-value=2e-15 Score=98.47 Aligned_cols=82 Identities=21% Similarity=0.380 Sum_probs=63.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc-------------CccC-CCCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP-------------TWRN-PQHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~-------------~~~~-~~~~~~~~ 91 (132)
.+++++|+||++ ||++|+.+.|.++++.++++ ++.++.|+++... .|.. ......++
T Consensus 24 ~~k~~ll~f~~~--------~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 94 (136)
T 1zzo_A 24 LGKPAVLWFWAP--------WCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW 94 (136)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH
T ss_pred CCCeEEEEEEcC--------CChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH
Confidence 578999999997 99999999999999999998 8999999986521 0000 00111256
Q ss_pred ccccccccceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
..|+|.++||+++++ +|+.+ ++.|.
T Consensus 95 ~~~~i~~~P~~~~id~~g~i~-~~~g~ 120 (136)
T 1zzo_A 95 ANFGVTQQPAYAFVDPHGNVD-VVRGR 120 (136)
T ss_dssp HHTTCCSSSEEEEECTTCCEE-EEESC
T ss_pred HHcCCCCCceEEEECCCCCEE-EEecC
Confidence 789999999999996 67777 77775
No 114
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.62 E-value=1.5e-15 Score=99.35 Aligned_cols=93 Identities=12% Similarity=0.312 Sum_probs=69.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc-CccC------------CCCCccccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP-TWRN------------PQHPFRVNS 92 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~-~~~~------------~~~~~~~~~ 92 (132)
.+++++|.||++ ||++|+.+.|.+.++.++++ ++.++.|+++... .|+. ....-.+++
T Consensus 23 ~~k~~lv~f~~~--------~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 93 (136)
T 1lu4_A 23 QGKPAVLWFWTP--------WCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWA 93 (136)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHH
T ss_pred CCCEEEEEEECC--------cChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHH
Confidence 578999999997 99999999999999999998 8999999987621 0000 000112567
Q ss_pred cccccccceEEEEe-CCeEeEEec---CcchhcHHHHHHhhh
Q 032841 93 RFKLTGVPTLFRWE-NDIVSGRLE---DHEAHLEHKIKALLS 130 (132)
Q Consensus 93 ~~~v~~vPt~~~~~-~g~~~~~~~---~~~~~~~~~l~~~l~ 130 (132)
.|+|.++||+++++ +|+.+ ++. |. ...+.|.++|+
T Consensus 94 ~~~i~~~P~~~lid~~G~i~-~~~~~~g~--~~~~~l~~~l~ 132 (136)
T 1lu4_A 94 RYNVPWQPAFVFYRADGTST-FVNNPTAA--MSQDELSGRVA 132 (136)
T ss_dssp HTTCCSSSEEEEECTTSCEE-EECCSSSC--CCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCCcEE-EEEcCCCc--cCHHHHHHHHH
Confidence 89999999999996 67777 777 64 23445666554
No 115
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.61 E-value=7e-16 Score=92.39 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=59.7
Q ss_pred EEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 30 NFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 30 v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
..|.|||+ ||++|+.+.|.++++.++++.++.++.+| . . + ++.+|+|.++||+++ +|+
T Consensus 2 ~~v~f~a~--------wC~~C~~~~~~l~~~~~~~~~~~~~~~v~--~-~---~------~~~~~~v~~~Pt~~~--~G~ 59 (77)
T 1ilo_A 2 MKIQIYGT--------GCANCQMLEKNAREAVKELGIDAEFEKIK--E-M---D------QILEAGLTALPGLAV--DGE 59 (77)
T ss_dssp EEEEEECS--------SSSTTHHHHHHHHHHHHHTTCCEEEEEEC--S-H---H------HHHHHTCSSSSCEEE--TTE
T ss_pred cEEEEEcC--------CChhHHHHHHHHHHHHHHcCCceEEEEec--C-H---H------HHHHCCCCcCCEEEE--CCE
Confidence 35899998 99999999999999999987778888887 2 2 2 677899999999988 887
Q ss_pred EeEEecCcchhcHHHHHHhh
Q 032841 110 VSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~l 129 (132)
.+.+ |.. ...+.|+++|
T Consensus 60 ~~~~--G~~-~~~~~l~~~l 76 (77)
T 1ilo_A 60 LKIM--GRV-ASKEEIKKIL 76 (77)
T ss_dssp EEEC--SSC-CCHHHHHHHC
T ss_pred EEEc--CCC-CCHHHHHHHh
Confidence 7655 432 1456777776
No 116
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.61 E-value=2e-15 Score=101.02 Aligned_cols=97 Identities=20% Similarity=0.367 Sum_probs=73.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc--CccC----C--------CCCccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP--TWRN----P--------QHPFRV 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~--~~~~----~--------~~~~~~ 90 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .++. . ...-.+
T Consensus 27 ~gk~vll~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (154)
T 3kcm_A 27 KGQVVIVNFWAT--------WCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRV 98 (154)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHH
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHH
Confidence 679999999998 999999999999999999974 7899999998741 0000 0 001124
Q ss_pred cccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 91 NSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+..|+|.++|++++++ +|+.+.++.|......+.+.++|+
T Consensus 99 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 139 (154)
T 3kcm_A 99 GKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLN 139 (154)
T ss_dssp HHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHH
Confidence 5689999999887875 688888888875445556666665
No 117
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.61 E-value=7.5e-16 Score=122.89 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=74.2
Q ss_pred cccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC---CcEEEEEEeCCCcCc
Q 032841 5 LSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD---DIALLQAYVGDRPTW 81 (132)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~---~~~~~~v~~~~~~~~ 81 (132)
+..++..+|++.+ . .++++++|+|||+ ||++|+++.|.++++++++.+ .+.|+.||++... .
T Consensus 14 V~~Lt~~~f~~~v---~---~~~k~vlV~FyA~--------WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~ 78 (519)
T 3t58_A 14 LTLLDADSVRPTV---L---GSSSAWAVEFFAS--------WCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-N 78 (519)
T ss_dssp SEEECTTTHHHHH---S---SCSSEEEEEEECT--------TSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-G
T ss_pred cEECChHHHHHHH---H---hCCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-c
Confidence 3445566776653 2 3679999999998 999999999999999998865 7999999996421 1
Q ss_pred cCCCCCccccccccccccceEEEEeCC----eEeEEecCcchhcHHHHHHhh
Q 032841 82 RNPQHPFRVNSRFKLTGVPTLFRWEND----IVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 82 ~~~~~~~~~~~~~~v~~vPt~~~~~~g----~~~~~~~~~~~~~~~~l~~~l 129 (132)
.+ ++.+|+|+++||+++|++| +.+.+..|. ...+.|+++|
T Consensus 79 ~~------l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~--~~~~~L~~~l 122 (519)
T 3t58_A 79 SA------VCREFNIAGFPTVRFFQAFTKNGSGATLPGAG--ANVQTLRMRL 122 (519)
T ss_dssp HH------HHHHTTCCSBSEEEEECTTCCSCCCEEECCSS--CCHHHHHHHH
T ss_pred HH------HHHHcCCcccCEEEEEcCcccCCCceeEecCC--CCHHHHHHHH
Confidence 12 7889999999999999954 333444443 3344444444
No 118
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.61 E-value=1.5e-15 Score=101.55 Aligned_cols=96 Identities=17% Similarity=0.341 Sum_probs=69.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc-CccC------C------CCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP-TWRN------P------QHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~------~------~~~~~~~ 91 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .++. . ...-.++
T Consensus 25 ~gk~vlv~F~~~--------~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (151)
T 2f9s_A 25 KGKGVFLNFWGT--------WCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL 96 (151)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 679999999998 999999999999999988864 6999999997632 0000 0 0011256
Q ss_pred ccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhh
Q 032841 92 SRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALL 129 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l 129 (132)
..|+|.++||+++++ +|+.+.++.|.. ....+.|++++
T Consensus 97 ~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 97 DAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 789999999999995 688888888762 22334444444
No 119
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.61 E-value=1.5e-15 Score=100.81 Aligned_cols=93 Identities=14% Similarity=0.301 Sum_probs=69.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHH---HHHhCC-CCcEEEEEEeCCCc-Ccc--------------CCCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYK---TLEASP-DDIALLQAYVGDRP-TWR--------------NPQH 86 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~---~~~~~~-~~~~~~~v~~~~~~-~~~--------------~~~~ 86 (132)
.+++++|+|||+ ||++|+.+.|.+.+ +.+++. .++.++.|+.+... .|+ ++..
T Consensus 30 ~gk~vll~F~a~--------wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 101 (142)
T 3eur_A 30 PAEYTLLFINNP--------GCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKEL 101 (142)
T ss_dssp CCSEEEEEECCS--------SSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccc
Confidence 579999999998 99999999999999 888774 57999999987652 111 1111
Q ss_pred CccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhhc
Q 032841 87 PFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
...++..|+|.++||+++++ +|+.+.+..+ .+.|+++|++
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~-----~~~l~~~l~e 142 (142)
T 3eur_A 102 VIKNKNLYDLRAIPTLYLLDKNKTVLLKDAT-----LQKVEQYLAE 142 (142)
T ss_dssp HHHHTTCSCCTTCSEEEEECTTCBEEEEEEC-----HHHHHHHHHC
T ss_pred hhhhhhhcCCCcCCeEEEECCCCcEEecCCC-----HHHHHHHHhC
Confidence 11135789999999999997 5777776654 4567777753
No 120
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.61 E-value=2.6e-15 Score=101.49 Aligned_cols=96 Identities=23% Similarity=0.411 Sum_probs=71.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc-Cc-cCCCC--------Cccccccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP-TW-RNPQH--------PFRVNSRF 94 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~-~~-~~~~~--------~~~~~~~~ 94 (132)
.+++++|+||++ ||++|+.+.|.+.++.++++ .++.++.|+.+... .| +.... .-.++..|
T Consensus 40 ~gk~vll~F~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (158)
T 3hdc_A 40 RGKIVLVNFWAS--------WCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRY 111 (158)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHT
T ss_pred CCCEEEEEEECC--------cCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHh
Confidence 578999999998 99999999999999999987 67999999987621 11 00000 11256789
Q ss_pred cccccceEEEEe-CCeEeEEecCcchhcHHHHHHhh
Q 032841 95 KLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 95 ~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
+|.++|++++++ +|+.+.++.|....+.+.+.+.+
T Consensus 112 ~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~ 147 (158)
T 3hdc_A 112 GANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYL 147 (158)
T ss_dssp TCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHH
T ss_pred CCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHH
Confidence 999999988885 68888899988544444444433
No 121
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.60 E-value=2.3e-15 Score=100.88 Aligned_cols=94 Identities=12% Similarity=0.189 Sum_probs=69.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcCccC--------------C-CCCcc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPTWRN--------------P-QHPFR 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~~~~--------------~-~~~~~ 89 (132)
.|++++|+|||+ |||+|+.+.|.+.++.+++. .++.++.|+++....++. . ...-.
T Consensus 23 ~gk~vlv~F~a~--------wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (151)
T 3raz_A 23 KAPVRIVNLWAT--------WCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRN 94 (151)
T ss_dssp CSSEEEEEEECT--------TCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHH
T ss_pred CCCEEEEEEEcC--------cCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHH
Confidence 689999999998 99999999999999999985 579999999975332110 0 00111
Q ss_pred cccccc--ccccceEEEEe-CCeEeEEecCcchhcHHHHHHhh
Q 032841 90 VNSRFK--LTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 90 ~~~~~~--v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
++..|+ +.++||+++++ +|+.+.++.|.. ..+.|.++|
T Consensus 95 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~~l 135 (151)
T 3raz_A 95 FMKTYGNTVGVLPFTVVEAPKCGYRQTITGEV--NEKSLTDAV 135 (151)
T ss_dssp HHHTTTCCSCCSSEEEEEETTTTEEEECCSCC--CHHHHHHHH
T ss_pred HHHHhCCccCCCCEEEEECCCCcEEEEECCCC--CHHHHHHHH
Confidence 446788 99999999996 688888888763 233444444
No 122
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.60 E-value=2.2e-15 Score=100.67 Aligned_cols=97 Identities=12% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc-Ccc----CCC--------CCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP-TWR----NPQ--------HPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~-~~~----~~~--------~~~~~~ 91 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .++ ... ....++
T Consensus 27 ~gk~vll~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 98 (152)
T 3gl3_A 27 TGSVVYLDFWAS--------WCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTP 98 (152)
T ss_dssp TTSEEEEEEECT--------TCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHH
T ss_pred CCCEEEEEEECC--------cCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhH
Confidence 678999999998 999999999999999998874 4899999987543 110 000 011245
Q ss_pred ccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 92 SRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
..|+|.++||+++++ +|+.+.+..|......+.|.++|+
T Consensus 99 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~ 138 (152)
T 3gl3_A 99 RLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQIL 138 (152)
T ss_dssp HHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHH
T ss_pred HHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHH
Confidence 779999999999995 688888898875555556666654
No 123
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.60 E-value=5e-15 Score=99.62 Aligned_cols=97 Identities=22% Similarity=0.267 Sum_probs=71.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhh-hHHHHHHHHhCC-CCcEEEEEEeCCC-------cCc--------------c
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRA-EPVIYKTLEASP-DDIALLQAYVGDR-------PTW--------------R 82 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~-~p~~~~~~~~~~-~~~~~~~v~~~~~-------~~~--------------~ 82 (132)
.+++++|+|||+ ||++|+.. .|.+.++.++++ .++.++.|+++.. ..+ .
T Consensus 27 ~gk~vlv~f~a~--------wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 27 RGKVIVIEAFQM--------LCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp TTSEEEEEEECT--------TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEEEECC--------cCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 589999999998 99999996 999999999997 5799999997521 000 0
Q ss_pred CCCCCc---cccccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 83 NPQHPF---RVNSRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 83 ~~~~~~---~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
++...- .++..|+|.++||+++++ +|+.+.++.|.. ....+.|+++++
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 111100 256789999999999996 688888888762 234555666654
No 124
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.60 E-value=1.6e-15 Score=119.74 Aligned_cols=97 Identities=15% Similarity=0.324 Sum_probs=74.5
Q ss_pred cccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC---CCcEEEEEEeCCCcCccC
Q 032841 7 DATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP---DDIALLQAYVGDRPTWRN 83 (132)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~---~~~~~~~v~~~~~~~~~~ 83 (132)
.++..+|++.+. .++++++|+|||+ ||++|+.+.|.++++++.++ .++.++.+|.+...
T Consensus 362 ~l~~~~f~~~v~------~~~k~vlv~F~a~--------wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~---- 423 (504)
T 2b5e_A 362 QLVGKNHDEIVN------DPKKDVLVLYYAP--------WCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND---- 423 (504)
T ss_dssp EECTTTHHHHHH------CTTCCEEEEEECT--------TCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC----
T ss_pred ecccccHHHhhc------cCCCCEEEEEECC--------CChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc----
Confidence 344556666532 3689999999997 99999999999999988764 37899999987654
Q ss_pred CCCCccccccccccccceEEEEeCCeE--eEEecCcchhcHHHHHHhhh
Q 032841 84 PQHPFRVNSRFKLTGVPTLFRWENDIV--SGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ~~~~~~~~~~~~v~~vPt~~~~~~g~~--~~~~~~~~~~~~~~l~~~l~ 130 (132)
... |+|+++||+++|.+|+. ..++.|. ...+.|.+||+
T Consensus 424 ------~~~-~~v~~~Pt~~~~~~G~~~~~~~~~G~--~~~~~l~~~i~ 463 (504)
T 2b5e_A 424 ------VRG-VVIEGYPTIVLYPGGKKSESVVYQGS--RSLDSLFDFIK 463 (504)
T ss_dssp ------CSS-CCCSSSSEEEEECCTTSCCCCBCCSC--CCHHHHHHHHH
T ss_pred ------ccc-CCceecCeEEEEeCCceecceEecCC--CCHHHHHHHHH
Confidence 333 99999999999998876 5566664 34556666665
No 125
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.60 E-value=1.7e-15 Score=101.69 Aligned_cols=96 Identities=17% Similarity=0.313 Sum_probs=70.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc-CccC----CCC-----------Cc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP-TWRN----PQH-----------PF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~----~~~-----------~~ 88 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .|+. ... .-
T Consensus 28 ~gk~vll~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 99 (152)
T 2lrn_A 28 KGKYVLVDFWFA--------GCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVK 99 (152)
T ss_dssp TTSEEEEEEECT--------TCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHH
T ss_pred CCCEEEEEEECC--------CChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhH
Confidence 689999999998 999999999999999998874 5999999988532 1100 000 01
Q ss_pred cccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 89 RVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.++..|+|.++||+++++ +|+.+.+..+. ...++.|+++++
T Consensus 100 ~~~~~~~v~~~P~~~lid~~G~i~~~~~~~-~~l~~~l~~l~~ 141 (152)
T 2lrn_A 100 DVLESYCIVGFPHIILVDPEGKIVAKELRG-DDLYNTVEKFVN 141 (152)
T ss_dssp HHHHHTTCCSSCEEEEECTTSEEEEECCCT-THHHHHHHHHHT
T ss_pred HHHHHhCCCcCCeEEEECCCCeEEEeeCCH-HHHHHHHHHHHh
Confidence 255789999999999995 68888776443 344556666654
No 126
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.60 E-value=1.8e-15 Score=100.31 Aligned_cols=84 Identities=14% Similarity=0.378 Sum_probs=66.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcC-------------cc---CCCCCc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPT-------------WR---NPQHPF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~-------------~~---~~~~~~ 88 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++...+ |. ++...-
T Consensus 30 ~gk~vll~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 101 (148)
T 3hcz_A 30 QAKYTILFFWDS--------QCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHT 101 (148)
T ss_dssp CCSEEEEEEECG--------GGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccch
Confidence 689999999998 999999999999999998874 59999999986542 21 111111
Q ss_pred cccccccccccceEEEEe-CCeEeEEecCc
Q 032841 89 RVNSRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.++..|+|.++||+++++ +|+.+.+..|.
T Consensus 102 ~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 102 DFKITYDIYATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp CHHHHHCCCSSCEEEEECTTCBEEEESCCG
T ss_pred hHHHhcCcCCCCEEEEECCCCcEEEecCCH
Confidence 156789999999999995 68888888776
No 127
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.60 E-value=4.3e-15 Score=96.68 Aligned_cols=95 Identities=16% Similarity=0.249 Sum_probs=70.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC------c----cCC---------CC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT------W----RNP---------QH 86 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~------~----~~~---------~~ 86 (132)
.+++++|+||++ ||++|+.+.|.+.++.++++.++.++.++.+.... + +.. ..
T Consensus 21 ~gk~~lv~f~~~--------~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 92 (138)
T 4evm_A 21 KGKKVYLKFWAS--------WCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDP 92 (138)
T ss_dssp TTSEEEEEECCT--------TCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECT
T ss_pred CCCEEEEEEEcC--------cCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECc
Confidence 689999999998 99999999999999999987789999996533110 0 000 00
Q ss_pred CccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 87 PFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.-.++..|+|.++||+++++ +|+.+.+..|.. ..+.+.++|+
T Consensus 93 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~~l~ 135 (138)
T 4evm_A 93 SGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFM--EKDAILQTLK 135 (138)
T ss_dssp TCHHHHHTTCCSSSEEEEECTTCCEEEEEESCC--CHHHHHHHHH
T ss_pred chHHHHHcCcccCCeEEEECCCCcEEEeecCCC--cHHHHHHHHH
Confidence 11245789999999999995 688888887753 3455666664
No 128
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.59 E-value=3.4e-15 Score=100.92 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=69.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---------------Ccc----CCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---------------TWR----NPQ 85 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---------------~~~----~~~ 85 (132)
.+++++|+|||+ ||++|+.+.|.+.++.+++. .++.++.|+++... .+. ...
T Consensus 37 ~gk~vlv~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 108 (164)
T 2h30_A 37 KDKPTLIKFWAS--------WCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTD 108 (164)
T ss_dssp TTSCEEEEECCT--------TCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEEC
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEc
Confidence 688999999998 99999999999999998874 57999999975321 000 000
Q ss_pred CCccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 86 HPFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
..-.++..|+|.++||+++++ +|+.+.++.|.. ..+.|.++|+
T Consensus 109 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~~i~ 152 (164)
T 2h30_A 109 NGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSI--NEAQALALIR 152 (164)
T ss_dssp TTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCC--CHHHHHHHHH
T ss_pred CchHHHHHcCCCccceEEEECCCCcEEEEEcCCC--CHHHHHHHHH
Confidence 011245789999999999995 688888887752 3445555554
No 129
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.58 E-value=3.5e-15 Score=100.81 Aligned_cols=97 Identities=25% Similarity=0.456 Sum_probs=68.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc-CccC----CCCCc-------cccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP-TWRN----PQHPF-------RVNS 92 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~----~~~~~-------~~~~ 92 (132)
.+++++|+||++ |||+|+.+.|.+.++.+++++ ++.++.|+++... .++. ....| .+..
T Consensus 33 ~gk~vlv~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3or5_A 33 KGKAYIVNFFAT--------WCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIR 104 (165)
T ss_dssp TTCEEEEEEECT--------TSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHH
T ss_pred CCCEEEEEEEcC--------cCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHH
Confidence 679999999998 999999999999999998874 5999999988643 1110 00000 1112
Q ss_pred cc------cccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 93 RF------KLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 93 ~~------~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
.| ++.++||+++++ +|+.+.++.|.. ....+.|+++++
T Consensus 105 ~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 105 AFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp HHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred HHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 23 899999999995 688888887763 233444555443
No 130
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.58 E-value=5e-15 Score=98.90 Aligned_cols=84 Identities=18% Similarity=0.351 Sum_probs=65.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc-CccC-------C------CCCccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP-TWRN-------P------QHPFRV 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~-~~~~-------~------~~~~~~ 90 (132)
.+++++|.||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .|+. + .....+
T Consensus 29 ~gk~~lv~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 100 (152)
T 2lja_A 29 KGKYIYIDVWAT--------WCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTF 100 (152)
T ss_dssp TTSEEEEEECCS--------SCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHH
T ss_pred CCCEEEEEEECC--------cCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhH
Confidence 679999999998 999999999999999999874 6999999987643 1100 0 001135
Q ss_pred cccccccccceEEEEe-CCeEeEEecCc
Q 032841 91 NSRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
+..|+|.++||+++++ +|+.+.+..|.
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i~~~~~g~ 128 (152)
T 2lja_A 101 MDAYLINGIPRFILLDRDGKIISANMTR 128 (152)
T ss_dssp HHHTTCCSSCCEEEECTTSCEEESSCCC
T ss_pred HHHcCcCCCCEEEEECCCCeEEEccCCC
Confidence 6789999999999998 78888777664
No 131
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.58 E-value=9.8e-15 Score=96.99 Aligned_cols=92 Identities=10% Similarity=0.131 Sum_probs=69.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc-C-----------c----cCCCC-C
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP-T-----------W----RNPQH-P 87 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~-~-----------~----~~~~~-~ 87 (132)
.+++++|+|||+ ||++|+.+.|.+.++.++++ .++.++.|+++... . | .+... .
T Consensus 31 ~gk~vll~F~a~--------wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 102 (143)
T 4fo5_A 31 LGRYTLLNFWAA--------YDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKE 102 (143)
T ss_dssp SCCEEEEEEECT--------TCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGG
T ss_pred CCCEEEEEEEcC--------cCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccc
Confidence 689999999998 99999999999999999987 46999999988543 1 1 01000 0
Q ss_pred ccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 88 FRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 88 ~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
-.++..|+|.++|++++++ +|+.+.+..+ .+.++++|+
T Consensus 103 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~-----~~~l~~~l~ 141 (143)
T 4fo5_A 103 SELYKKYDLRKGFKNFLINDEGVIIAANVT-----PEKLTEILK 141 (143)
T ss_dssp SHHHHHTTGGGCCCEEEECTTSBEEEESCC-----HHHHHHHHT
T ss_pred hHHHHHcCCCCCCcEEEECCCCEEEEccCC-----HHHHHHHHH
Confidence 1245679999999999998 6887776554 345666654
No 132
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.57 E-value=6.2e-16 Score=107.55 Aligned_cols=71 Identities=13% Similarity=0.114 Sum_probs=56.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHH-H--HHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccc--------
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPV-I--YKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF-------- 94 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~-~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------- 94 (132)
++++|+|+|||+ ||++|+.|.|. + .++.+.+.+++.++.||.++.+ + ++..|
T Consensus 38 ~~KpVlvdF~A~--------WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~---~------l~~~y~~~~q~~~ 100 (173)
T 3ira_A 38 ENKPVFLSIGYS--------TCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERP---D------IDNIYMTVCQIIL 100 (173)
T ss_dssp HTCCEEEEEECT--------TCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCH---H------HHHHHHHHHHHHH
T ss_pred hCCCEEEecccc--------hhHhhccccccccCCHHHHHHHHhcCceeeeCCcccC---c------HHHHHHHHHHHHc
Confidence 789999999998 99999999983 3 3455555446889999998765 2 55556
Q ss_pred cccccceEEEEe-CCeEeEE
Q 032841 95 KLTGVPTLFRWE-NDIVSGR 113 (132)
Q Consensus 95 ~v~~vPt~~~~~-~g~~~~~ 113 (132)
++.++||+++++ +|+++..
T Consensus 101 gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp SCCCSSEEEEECTTSCEEEE
T ss_pred CCCCCcceeeECCCCCceee
Confidence 999999999998 6877654
No 133
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.57 E-value=1.1e-15 Score=126.16 Aligned_cols=89 Identities=10% Similarity=0.120 Sum_probs=74.1
Q ss_pred CCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEE
Q 032841 25 PKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFR 104 (132)
Q Consensus 25 ~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~ 104 (132)
..+++++|+|||+ ||++|+.+.|.++++++++.+++.++.||++... . ++.+|+|+++||+++
T Consensus 673 ~~~~~v~v~F~a~--------wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~---~------~~~~~~v~~~Pt~~~ 735 (780)
T 3apo_A 673 QGKTHWVVDFYAP--------WSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYP---Q------TCQKAGIKAYPSVKL 735 (780)
T ss_dssp TCSSCEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH---H------HHHHTTCCSSSEEEE
T ss_pred cCCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCH---H------HHHhcCCCcCCEEEE
Confidence 3789999999997 9999999999999999988778999999998765 2 677899999999999
Q ss_pred EeCCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 105 WENDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 105 ~~~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
+++|+.+.++.|.. ....+.|.++|+
T Consensus 736 ~~~g~~~~~~~G~~~g~~~~~~l~~~l~ 763 (780)
T 3apo_A 736 YQYERAKKSIWEEQINSRDAKTIAALIY 763 (780)
T ss_dssp EEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred EcCCCccccccCcccCCcCHHHHHHHHH
Confidence 99888877777742 344555666654
No 134
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.56 E-value=3.1e-15 Score=99.42 Aligned_cols=82 Identities=17% Similarity=0.349 Sum_probs=62.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCc-CccC--CCC------------Cc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRP-TWRN--PQH------------PF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~-~~~~--~~~------------~~ 88 (132)
.+++++|+|||+ ||++|+.+.|.+.++.++++ .++.++.|+++... .|+. ... .-
T Consensus 27 ~gk~vll~F~a~--------wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 98 (144)
T 1i5g_A 27 AGKTVFFYFSAS--------WCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGME 98 (144)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHH
Confidence 678999999998 99999999999999999886 47999999988632 0100 000 01
Q ss_pred cccccccccccceEEEEe--CCeEeEEec
Q 032841 89 RVNSRFKLTGVPTLFRWE--NDIVSGRLE 115 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~--~g~~~~~~~ 115 (132)
.+++.|+|.++||+++++ +|+.+.+..
T Consensus 99 ~~~~~~~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 99 FLTTGFDVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHcCCCCCCEEEEEECCCCcEEeccc
Confidence 256789999999999997 677666543
No 135
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.56 E-value=1.3e-15 Score=119.92 Aligned_cols=84 Identities=17% Similarity=0.212 Sum_probs=67.7
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC---C-----CcEEEEEEe
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP---D-----DIALLQAYV 75 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~---~-----~~~~~~v~~ 75 (132)
.++.++..+|++.+. . .++++++|+|||+ ||++|+.+.|.++++++++. + .+.|+.||+
T Consensus 24 ~V~~Lt~~~F~~~l~---~--~~~k~VlV~FyA~--------WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~ 90 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHR---V--APLCPWIVLFYND--------GCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNC 90 (470)
T ss_dssp TEEECSCSCGGGTCT---T--GGGSCEEEEEECT--------TCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEET
T ss_pred CcEECCHHHHHHHHH---h--CCCCeEEEEEECC--------CCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEEC
Confidence 355666677776532 1 2457999999997 99999999999999999886 2 499999999
Q ss_pred CCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 76 GDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
+... + ++.+|+|.++||+++|++|+
T Consensus 91 d~~~---~------la~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 91 ASEV---D------LCRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp TTCH---H------HHHHTTCCSSCEEEEEEESS
T ss_pred CCCH---H------HHHHcCCCccCeEEEEECCC
Confidence 8765 3 78899999999999997543
No 136
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.55 E-value=8e-15 Score=106.71 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=77.4
Q ss_pred ccccccccchHHHHHHHhhhCCCCCeEEEEEEe--eCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCC--
Q 032841 4 NLSDATVSSFDNVFDKFKSEAPKNKANFILFLA--DKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGD-- 77 (132)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a--~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~-- 77 (132)
.++.++..+|++++. ++++++|.||| + ||+ +.|.++++++.+. +++.|+.||+++
T Consensus 6 ~v~~Lt~~nF~~~i~-------~~~~vlV~FyA~~p--------WCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g 66 (240)
T 2qc7_A 6 GALPLDTVTFYKVIP-------KSKFVLVKFDTQYP--------YGE----KQDEFKRLAENSASSDDLLVAEVGISDYG 66 (240)
T ss_dssp TCEECCTTHHHHHGG-------GCSEEEEEECCSSC--------CSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS
T ss_pred CceECCHHHHHHHHc-------CCCCEEEEEeCCCC--------CCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc
Confidence 455667777777532 57899999999 7 999 9999999998874 479999999876
Q ss_pred CcCccCCCCCcccccccccc--ccceEEEEeCCe--EeEEecCcchhcHHHHHHhhhc
Q 032841 78 RPTWRNPQHPFRVNSRFKLT--GVPTLFRWENDI--VSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~v~--~vPt~~~~~~g~--~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
.....+ ++.+|+|+ ++||+++|.+|+ ...++.|. ...+.|.+||+.
T Consensus 67 ~~~~~~------l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~--~~~~~L~~fi~~ 116 (240)
T 2qc7_A 67 DKLNME------LSEKYKLDKESYPVFYLFRDGDFENPVPYTGA--VKVGAIQRWLKG 116 (240)
T ss_dssp SCCSHH------HHHHTTCCGGGCSEEEEEETTCSSCCEECCSC--SCHHHHHHHHHH
T ss_pred chhhHH------HHHHcCCCCCCCCEEEEEeCCCcCcceeecCC--CCHHHHHHHHHH
Confidence 332223 78899999 999999999987 45677764 345577777763
No 137
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.55 E-value=9.1e-15 Score=96.71 Aligned_cols=93 Identities=15% Similarity=0.340 Sum_probs=65.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHH---HHHhCC-CCcEEEEEEeCCCc-CccC--------------CCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYK---TLEASP-DDIALLQAYVGDRP-TWRN--------------PQH 86 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~---~~~~~~-~~~~~~~v~~~~~~-~~~~--------------~~~ 86 (132)
.+++++|+|||+ |||+|+.+.|.+.+ +.+++. .++.++.|+++... .|+. +..
T Consensus 26 ~gk~vll~F~a~--------~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 97 (142)
T 3ewl_A 26 KAQYTMLFFYDP--------DCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAG 97 (142)
T ss_dssp CCSEEEEEECCS--------SCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCcc
Confidence 689999999998 99999999999888 777765 46999999988543 1110 000
Q ss_pred CccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhhc
Q 032841 87 PFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
....+..|+|.++||+++++ +|+.+.+. ...+.|+++|++
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~-----~~~~~l~~~l~~ 138 (142)
T 3ewl_A 98 DIRTRQLYDIRATPTIYLLDGRKRVILKD-----TSMEQLIDYLAT 138 (142)
T ss_dssp HHHHTTCSCCCSSSEEEEECTTCBEEECS-----CCHHHHHHHHHC
T ss_pred chhhHHHcCCCCCCeEEEECCCCCEEecC-----CCHHHHHHHHHH
Confidence 00013489999999999997 57665422 335566676653
No 138
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.54 E-value=1.8e-14 Score=97.77 Aligned_cols=93 Identities=15% Similarity=0.333 Sum_probs=66.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC------------------CCc-CccC---
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG------------------DRP-TWRN--- 83 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~------------------~~~-~~~~--- 83 (132)
.+++++|+||++ ||++|+.+.|.+.++.++++ ++.++.|+++ ... .|+.
T Consensus 36 ~gk~~lv~F~~~--------~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (165)
T 3ha9_A 36 GGDVVILWFMAA--------WCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIA 106 (165)
T ss_dssp CSSEEEEEEECT--------TCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHH
T ss_pred CCCEEEEEEECC--------CCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHH
Confidence 689999999998 99999999999999999998 8999999987 221 0000
Q ss_pred ---C-CC-----CccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 84 ---P-QH-----PFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 84 ---~-~~-----~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
. .. ...++..|+|.++||+++++ +|+.+. .|.. ...+.|+++|+
T Consensus 107 ~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~-~~~~~l~~~l~ 160 (165)
T 3ha9_A 107 NYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTT-PSLGELESVIK 160 (165)
T ss_dssp HHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEES-CCHHHHHHHHH
T ss_pred HcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCC-CCHHHHHHHHH
Confidence 0 00 01356789999999999996 466555 3332 03445555554
No 139
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.54 E-value=8.5e-15 Score=100.21 Aligned_cols=82 Identities=20% Similarity=0.443 Sum_probs=63.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEEEeCCCcC-ccC--CCCC------------c
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQAYVGDRPT-WRN--PQHP------------F 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~--~~~~------------~ 88 (132)
.+++++|+|||+ ||++|+.+.|.+.++.+++++ ++.++.|+++...+ |+. .... -
T Consensus 47 ~gk~vll~F~a~--------wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (165)
T 3s9f_A 47 SGKTVFFYFSAS--------WCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVE 118 (165)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred CCCEEEEEEECC--------cChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHH
Confidence 689999999998 999999999999999998864 78999999886531 100 0000 1
Q ss_pred cccccccccccceEEEEe-C-CeEeEEec
Q 032841 89 RVNSRFKLTGVPTLFRWE-N-DIVSGRLE 115 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~-g~~~~~~~ 115 (132)
.+++.|+|.++||+++++ + |+.+.+..
T Consensus 119 ~l~~~~~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 119 ALTKKYSVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHcCCCCCCEEEEEeCCCCEEEeccc
Confidence 256789999999999998 3 77666543
No 140
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.54 E-value=2e-14 Score=96.06 Aligned_cols=95 Identities=20% Similarity=0.238 Sum_probs=69.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc----------------CccCCCCCc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP----------------TWRNPQHPF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~----------------~~~~~~~~~ 88 (132)
.+++++|.||++ ||++|+.+.|.+.++.+++++ ++.++.|+.+... .+.+. .-
T Consensus 27 ~gk~~lv~f~~~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~ 96 (153)
T 2l5o_A 27 QGKVTLINFWFP--------SCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDA--DK 96 (153)
T ss_dssp TTCEEEEEEECT--------TCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECS--SC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCc--hH
Confidence 578999999997 999999999999999998873 5889988864321 00011 11
Q ss_pred cccccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 89 RVNSRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
.++..|+|.++||+++++ +|+.+.++.|.. ....+.|+++++
T Consensus 97 ~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 97 AVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp HHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 256789999999999995 688788887752 233444555554
No 141
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.54 E-value=8.4e-15 Score=97.09 Aligned_cols=82 Identities=20% Similarity=0.414 Sum_probs=62.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCc-Ccc----CC---CC-------Cc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRP-TWR----NP---QH-------PF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~-~~~----~~---~~-------~~ 88 (132)
.+++++|+|||+ ||++|+.+.|.+.++.++++ .++.++.|+++... .|+ .. .. .-
T Consensus 27 ~gk~vll~F~a~--------wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 1o73_A 27 VGKTVFLYFSAS--------WCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVS 98 (144)
T ss_dssp TTCEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred CCCEEEEEEECc--------CCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHH
Confidence 688999999998 99999999999999998876 57899999987632 000 00 00 01
Q ss_pred cccccccccccceEEEEe--CCeEeEEec
Q 032841 89 RVNSRFKLTGVPTLFRWE--NDIVSGRLE 115 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~--~g~~~~~~~ 115 (132)
.+++.|+|.++||+++++ +|+.+.+..
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 99 ELGKTFGVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHcCCCCCCEEEEEECCCCeEEecch
Confidence 255789999999999999 677666543
No 142
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.54 E-value=6.3e-15 Score=105.20 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=64.6
Q ss_pred CCCeE-EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEE
Q 032841 26 KNKAN-FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFR 104 (132)
Q Consensus 26 ~~~~v-~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~ 104 (132)
.++++ +|+|||+ ||++|+.+.|.+++++.+++ ++.++.+|++... + ++.+|+|.++||+++
T Consensus 134 ~~~~~~~v~F~a~--------wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~---~------l~~~~~v~~~Pt~~~ 195 (229)
T 2ywm_A 134 VDIPIEIWVFVTT--------SCGYCPSAAVMAWDFALAND-YITSKVIDASENQ---D------LAEQFQVVGVPKIVI 195 (229)
T ss_dssp CCSCEEEEEEECT--------TCTTHHHHHHHHHHHHHHCT-TEEEEEEEGGGCH---H------HHHHTTCCSSSEEEE
T ss_pred cCCCeEEEEEECC--------CCcchHHHHHHHHHHHHHCC-CeEEEEEECCCCH---H------HHHHcCCcccCEEEE
Confidence 34444 8899997 99999999999999999985 8999999998755 2 778999999999988
Q ss_pred EeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 105 WENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+|+ +.++.|.. ..+.|.++|+
T Consensus 196 --~G~-~~~~~G~~--~~~~l~~~l~ 216 (229)
T 2ywm_A 196 --NKG-VAEFVGAQ--PENAFLGYIM 216 (229)
T ss_dssp --GGG-TEEEESCC--CHHHHHHHHH
T ss_pred --CCE-EEEeeCCC--CHHHHHHHHH
Confidence 776 66677753 2334555543
No 143
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.54 E-value=1e-14 Score=100.85 Aligned_cols=85 Identities=14% Similarity=0.277 Sum_probs=63.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc--CccC----CC---C------Ccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP--TWRN----PQ---H------PFR 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~--~~~~----~~---~------~~~ 89 (132)
.+++++|+||++ ||++|+.+.|.+.++.++++ .++.++.|+++... .++. .. . ...
T Consensus 59 ~gk~vll~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 130 (186)
T 1jfu_A 59 RGKTLLVNLWAT--------WCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAK 130 (186)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCH
T ss_pred CCCEEEEEEEeC--------CCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcch
Confidence 689999999998 99999999999999999886 67999999987641 1110 00 0 011
Q ss_pred cccccccc----ccceEEEEe-CCeEeEEecCcc
Q 032841 90 VNSRFKLT----GVPTLFRWE-NDIVSGRLEDHE 118 (132)
Q Consensus 90 ~~~~~~v~----~vPt~~~~~-~g~~~~~~~~~~ 118 (132)
+.+.|++. ++|++++++ +|+.+.++.|..
T Consensus 131 ~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~ 164 (186)
T 1jfu_A 131 VFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPA 164 (186)
T ss_dssp HHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHhccccccCCCCEEEEECCCCCEEEEEecCC
Confidence 23345553 899999995 688888888864
No 144
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.54 E-value=1.2e-14 Score=97.43 Aligned_cols=91 Identities=22% Similarity=0.355 Sum_probs=66.8
Q ss_pred CeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---Ccc--------------CC-CCCcc
Q 032841 28 KANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWR--------------NP-QHPFR 89 (132)
Q Consensus 28 ~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~--------------~~-~~~~~ 89 (132)
++++|+||++ ||++|+.+.|.+.++.+++ ++.++.|+++... .|+ +. .....
T Consensus 31 k~vll~f~~~--------~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (154)
T 3ia1_A 31 KPAVIVFWAS--------WCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHE 100 (154)
T ss_dssp SSEEEEEECT--------TCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHH
T ss_pred CeEEEEEEcc--------cChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHH
Confidence 8999999998 9999999999999999988 7889999983211 110 00 01122
Q ss_pred ccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 90 VNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++..|+|.++|++++++ +|+.+.+..|.. ..+.|+++|+
T Consensus 101 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~~l~ 140 (154)
T 3ia1_A 101 VAARFKVLGQPWTFVVDREGKVVALFAGRA--GREALLDALL 140 (154)
T ss_dssp HHTTSSBCSSCEEEEECTTSEEEEEEESBC--CHHHHHHHHH
T ss_pred HHHHhCCCcccEEEEECCCCCEEEEEcCCC--CHHHHHHHHH
Confidence 56789999999998885 688888888762 2444555554
No 145
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.54 E-value=2.3e-14 Score=101.82 Aligned_cols=74 Identities=14% Similarity=0.222 Sum_probs=61.7
Q ss_pred CCCeEEEEEEeeCCCCCCCC-CChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC--CcCccCCCCCccccccccccccceE
Q 032841 26 KNKANFILFLADKDPSTSLS-WCPDCVRAEPVIYKTLEASPDDIALLQAYVGD--RPTWRNPQHPFRVNSRFKLTGVPTL 102 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~p-WC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~v~~vPt~ 102 (132)
++..++++||+ | ||++|+.+.|.++++++.. +++.|+.||++. .. + ++.+|+|+++||+
T Consensus 21 ~~~v~lv~f~~--------~~~C~~C~~~~~~~~~la~~~-~~v~~~~vd~~~~~~~---~------~~~~~~v~~~Pt~ 82 (226)
T 1a8l_A 21 VNPVKLIVFVR--------KDHCQYCDQLKQLVQELSELT-DKLSYEIVDFDTPEGK---E------LAKRYRIDRAPAT 82 (226)
T ss_dssp CSCEEEEEEEC--------SSSCTTHHHHHHHHHHHHTTC-TTEEEEEEETTSHHHH---H------HHHHTTCCSSSEE
T ss_pred CCCeEEEEEec--------CCCCchhHHHHHHHHHHHhhC-CceEEEEEeCCCcccH---H------HHHHcCCCcCceE
Confidence 45667788988 6 9999999999999998654 589999999886 44 3 7889999999999
Q ss_pred EEEeCCeEe-EEecCc
Q 032841 103 FRWENDIVS-GRLEDH 117 (132)
Q Consensus 103 ~~~~~g~~~-~~~~~~ 117 (132)
+++++|+.. .++.|.
T Consensus 83 ~~~~~g~~~~~~~~G~ 98 (226)
T 1a8l_A 83 TITQDGKDFGVRYFGL 98 (226)
T ss_dssp EEEETTBCCSEEEESC
T ss_pred EEEcCCceeeEEEecc
Confidence 999988764 677665
No 146
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.54 E-value=9.9e-15 Score=97.29 Aligned_cols=83 Identities=16% Similarity=0.322 Sum_probs=63.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCc-CccC--CCC------------Cc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRP-TWRN--PQH------------PF 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~-~~~~--~~~------------~~ 88 (132)
.+++++|+|||+ ||++|+.+.|.+.++.++++ .++.++.|+++... .|+. ... .-
T Consensus 27 ~gk~vll~F~a~--------wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 98 (146)
T 1o8x_A 27 AGKLVFFYFSAS--------WCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQ 98 (146)
T ss_dssp TTCEEEEEEECT--------TCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHH
T ss_pred CCCEEEEEEEcc--------CCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHH
Confidence 678999999998 99999999999999999886 47999999988632 0100 000 01
Q ss_pred cccccccccccceEEEEe--CCeEeEEecC
Q 032841 89 RVNSRFKLTGVPTLFRWE--NDIVSGRLED 116 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~--~g~~~~~~~~ 116 (132)
.+++.|+|.++||+++++ +|+.+.+..+
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 99 KLSKHFNVESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEEESCHH
T ss_pred HHHHHhCCCCCCEEEEEECCCCeEEEecch
Confidence 256789999999999998 6877665543
No 147
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=1.5e-14 Score=96.76 Aligned_cols=96 Identities=15% Similarity=0.258 Sum_probs=71.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChh--HHhhhHHHHHHHHhC-C-CCcEEEEEEeCCCc-Ccc--------------CCC-
Q 032841 26 KNKANFILFLADKDPSTSLSWCPD--CVRAEPVIYKTLEAS-P-DDIALLQAYVGDRP-TWR--------------NPQ- 85 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~--C~~~~p~~~~~~~~~-~-~~~~~~~v~~~~~~-~~~--------------~~~- 85 (132)
.|++++|+||++ ||++ |+.+.|.+.++.+++ . .++.++.|+++... .|+ ++.
T Consensus 32 ~gk~vll~F~a~--------~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 32 KQKSLLINFWAS--------WNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TTSEEEEEEECT--------TCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred CCCEEEEEEEeC--------CCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 689999999998 9999 999999999999988 5 35999999998653 111 100
Q ss_pred CCccccccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 86 HPFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
....++..|+|.++|++++++ +|+.+.+.. .....++.|+++++
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~-~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKILAKNL-RGEELKKKIENIVE 148 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBEEEESC-CHHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEEEEccC-CHHHHHHHHHHHHh
Confidence 011356789999999999996 688777765 33344556666654
No 148
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.53 E-value=1.9e-14 Score=105.20 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=76.0
Q ss_pred CccccccccchHHHHHHHhhhCCCCCeEEEEEE--eeCCCCCCCCCChhHHhhhHHHHHHHHhC---CCCcEEEEEEeCC
Q 032841 3 LNLSDATVSSFDNVFDKFKSEAPKNKANFILFL--ADKDPSTSLSWCPDCVRAEPVIYKTLEAS---PDDIALLQAYVGD 77 (132)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~--a~~~~~~~~pWC~~C~~~~p~~~~~~~~~---~~~~~~~~v~~~~ 77 (132)
-.++.++..+|++++. ++++++|.|| |+ ||+ +.|.++++++.+ .+++.|+.||+++
T Consensus 16 ~~v~~Lt~~nF~~vi~-------~~~~vlV~Fy~~Ap--------WCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~ 76 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVE-------RFPYSVVKFDIASP--------YGE----KHEAFTAFSKSAHKATKDLLIATVGVKD 76 (248)
T ss_dssp TTCEECCTTTHHHHHT-------TSSEEEEEEEESSC--------CSH----HHHHHHHHHHHHHHHCSSEEEEEEEECS
T ss_pred CCcEECCHHHHHHHHh-------cCCCEEEEEECCCC--------CCc----cHHHHHHHHHHHhccCCCeEEEEEECCc
Confidence 3456677788888642 6789999999 86 999 999999999887 3479999999987
Q ss_pred Cc--CccCCCCCcccccccccc--ccceEEEEeCCeE--eEEe--cCcchhcHHHHHHhhh
Q 032841 78 RP--TWRNPQHPFRVNSRFKLT--GVPTLFRWENDIV--SGRL--EDHEAHLEHKIKALLS 130 (132)
Q Consensus 78 ~~--~~~~~~~~~~~~~~~~v~--~vPt~~~~~~g~~--~~~~--~~~~~~~~~~l~~~l~ 130 (132)
.. ...+ ++.+|+|+ ++||+++|. |+. ..++ .|. ...+.|.+||+
T Consensus 77 ~g~~~n~~------la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~--~~~~~L~~fi~ 128 (248)
T 2c0g_A 77 YGELENKA------LGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVD--VTLDNLKAFVS 128 (248)
T ss_dssp STTCTTHH------HHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSC--CCHHHHHHHHH
T ss_pred ccccccHH------HHHHhCCCcCCCCeEEEEe-CCcCcceeecccCC--CCHHHHHHHHH
Confidence 21 0113 78899999 999999999 873 4555 554 44557777776
No 149
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.53 E-value=3e-15 Score=96.10 Aligned_cols=79 Identities=13% Similarity=0.222 Sum_probs=55.9
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC-cCccCCCCCccccccccccccceEEEE
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR-PTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
+++++|+|||+ |||+|+.+.|.+++++++++ ++.++.+.. .+..+ ++.+|+|+++||+++
T Consensus 12 ~k~~vV~F~A~--------WC~~C~~~~p~~~~~a~~~~----~v~~~~~~~~~~~~~------l~~~~~V~~~PT~~i- 72 (106)
T 3kp8_A 12 RQIGGTMYGAY--------WCPHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQ------ECTEAGITSYPTWII- 72 (106)
T ss_dssp HHHTCEEEECT--------TCHHHHHHHHHHGGGGGGSC----EEESCTTCTTSCCCH------HHHHTTCCSSSEEEE-
T ss_pred CCCEEEEEECC--------CCHHHHHHHHHHHHHHHhCC----EEEEecccccchhHH------HHHHcCCeEeCEEEE-
Confidence 46778999997 99999999999999987764 333333221 00112 778999999999877
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+|+ ++.|. ...+.|.+++.
T Consensus 73 -~G~---~~~G~--~~~~~l~~~~~ 91 (106)
T 3kp8_A 73 -NGR---TYTGV--RSLEALAVASG 91 (106)
T ss_dssp -TTE---EEESC--CCHHHHHHHHT
T ss_pred -CCE---EecCC--CCHHHHHHHhC
Confidence 775 35554 34567777764
No 150
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.52 E-value=1.5e-14 Score=97.49 Aligned_cols=95 Identities=19% Similarity=0.250 Sum_probs=70.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcC-cc------------CCCCC-ccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPT-WR------------NPQHP-FRV 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~-~~------------~~~~~-~~~ 90 (132)
.+++++|+||++ ||++|+...|.+.++.+++++ ++.++.|+++...+ |+ ++... ..+
T Consensus 34 ~gk~vll~F~a~--------wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 105 (152)
T 2lrt_A 34 KGKVVLIDFTVY--------NNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSY 105 (152)
T ss_dssp GGSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHH
T ss_pred CCCEEEEEEEcC--------CChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHH
Confidence 578999999998 999999999999999998863 59999999986541 11 11100 014
Q ss_pred cccccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhh
Q 032841 91 NSRFKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
+..|+|.++||+++++ +|+.+.+..|.... ++.+.+.+
T Consensus 106 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~-e~~~~~~~ 144 (152)
T 2lrt_A 106 ISLYNVTNLPSVFLVNRNNELSARGENIKDL-DEAIKKLL 144 (152)
T ss_dssp HHHHTCCSCSEEEEEETTTEEEEETTTCSCH-HHHHHHHH
T ss_pred HHHcCcccCceEEEECCCCeEEEecCCHHHH-HHHHHHHH
Confidence 5689999999999996 68888888876443 33444443
No 151
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.51 E-value=5.7e-14 Score=93.96 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=62.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC-cc---------CC----CCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT-WR---------NP----QHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~-~~---------~~----~~~~~~~ 91 (132)
.+++++|+||++ ||++|+.+.|.++++.++ +++.++.|+++...+ |+ -+ .....++
T Consensus 41 ~gk~~ll~f~~~--------~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (156)
T 1kng_A 41 KGKVSLVNVWAS--------WCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS 110 (156)
T ss_dssp TTSCEEEEEECT--------TCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH
T ss_pred CCCEEEEEEEcc--------cCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH
Confidence 588999999998 999999999999999876 479999999865320 00 00 0111255
Q ss_pred ccccccccceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
..|+|.++||+++++ +|+.+.++.|.
T Consensus 111 ~~~~v~~~P~~~~id~~G~i~~~~~g~ 137 (156)
T 1kng_A 111 IEWGVYGVPETFVVGREGTIVYKLVGP 137 (156)
T ss_dssp HHTTCCSSCEEEEECTTSBEEEEEESC
T ss_pred HhcCcCccCeEEEEcCCCCEEEEEeCC
Confidence 679999999877774 78888888776
No 152
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.25 E-value=1.4e-15 Score=100.48 Aligned_cols=81 Identities=17% Similarity=0.313 Sum_probs=61.3
Q ss_pred CCC-eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC---CCcEEEEEEeCCCc-CccCC---------------C
Q 032841 26 KNK-ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP---DDIALLQAYVGDRP-TWRNP---------------Q 85 (132)
Q Consensus 26 ~~~-~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~---~~~~~~~v~~~~~~-~~~~~---------------~ 85 (132)
.++ +++|+|||+ |||+|+.+.|.+.++.+++. .++.++.|+++... .|+.- .
T Consensus 24 ~gk~~vll~F~a~--------wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (143)
T 2lus_A 24 KDKDIIGFYFSAH--------WCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSG 95 (143)
Confidence 467 999999998 99999999999999998883 47888888887542 11110 0
Q ss_pred CCccccccccccccceEEEEe-CCeEeEEe
Q 032841 86 HPFRVNSRFKLTGVPTLFRWE-NDIVSGRL 114 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~-~g~~~~~~ 114 (132)
..-.++..|+|.++||+++++ +|+.+.+.
T Consensus 96 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 96 PASNVTAKYGITGIPALVIVKKDGTLISMN 125 (143)
Confidence 001366789999999999998 68776664
No 153
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.50 E-value=1.4e-14 Score=93.37 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=63.0
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
+.++.||++ |||+|+.+.|.|++++++++ +.+..+|+++.+ + ++.+|+++ +||++++.+|
T Consensus 30 ~~vv~y~~~--------~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~---~------l~~~ygv~-VP~l~~~~dG 89 (107)
T 2fgx_A 30 RKLVVYGRE--------GCHLCEEMIASLRVLQKKSW--FELEVINIDGNE---H------LTRLYNDR-VPVLFAVNED 89 (107)
T ss_dssp CCEEEEECS--------SCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCH---H------HHHHSTTS-CSEEEETTTT
T ss_pred cEEEEEeCC--------CChhHHHHHHHHHHHHHhcC--CeEEEEECCCCH---H------HHHHhCCC-CceEEEEECC
Confidence 568899997 99999999999999988875 889999998765 2 66689997 9999999999
Q ss_pred eEeEEecCcchhcHHHHHHhhh
Q 032841 109 IVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 109 ~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+.+. .|. .+.+.|+++|+
T Consensus 90 ~~v~--~g~--~~~~~L~~~L~ 107 (107)
T 2fgx_A 90 KELC--HYF--LDSDVIGAYLS 107 (107)
T ss_dssp EEEE--CSS--CCCHHHHHHHC
T ss_pred EEEE--ecC--CCHHHHHHHhC
Confidence 8762 232 45567888763
No 154
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.49 E-value=3.3e-14 Score=98.15 Aligned_cols=97 Identities=11% Similarity=0.155 Sum_probs=66.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-Cc------EEEEEEeCC-Cc-CccC----CCCCc----
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DI------ALLQAYVGD-RP-TWRN----PQHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~------~~~~v~~~~-~~-~~~~----~~~~~---- 88 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++ .|+.|+++. .. .++. ....|
T Consensus 58 ~gk~vlv~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 129 (183)
T 3lwa_A 58 ENQVVILNAWGQ--------WCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIY 129 (183)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEE
T ss_pred CCCEEEEEEECC--------cCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEE
Confidence 689999999998 999999999999999988763 47 999999987 22 1111 00001
Q ss_pred ----ccccc---ccccccceEEEEe-CCeEeEEecCc--chhcHHHHHHhhh
Q 032841 89 ----RVNSR---FKLTGVPTLFRWE-NDIVSGRLEDH--EAHLEHKIKALLS 130 (132)
Q Consensus 89 ----~~~~~---~~v~~vPt~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~ 130 (132)
.+... |++.++|++++++ +|+.+.++.|. .....+.|+++++
T Consensus 130 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 130 DPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp CTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 12223 4689999877775 68888888775 2233444555544
No 155
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.49 E-value=3.6e-14 Score=96.47 Aligned_cols=79 Identities=18% Similarity=0.289 Sum_probs=60.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC-c---------------cCCCCCcc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT-W---------------RNPQHPFR 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~-~---------------~~~~~~~~ 89 (132)
.+++++|+||++ |||+|+.+.|.++++.++ ++.++.|+++...+ + .+. .-.
T Consensus 50 ~gk~vll~F~a~--------~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~ 116 (168)
T 2b1k_A 50 QGKPVLLNVWAT--------WCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDG--DGM 116 (168)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEET--TCH
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECc--chH
Confidence 689999999998 999999999999999876 68899999765320 0 011 112
Q ss_pred ccccccccccceEEEEe-CCeEeEEecCc
Q 032841 90 VNSRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
++..|+|.++|++++++ +|+.+.+..|.
T Consensus 117 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 145 (168)
T 2b1k_A 117 LGLDLGVYGAPETFLIDGNGIIRYRHAGD 145 (168)
T ss_dssp HHHHHTCCSSSEEEEECTTSBEEEEEESC
T ss_pred HHHHcCccccCEEEEECCCCeEEEEEeCC
Confidence 55689999999776665 68888888775
No 156
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.49 E-value=2.3e-14 Score=89.08 Aligned_cols=72 Identities=19% Similarity=0.296 Sum_probs=55.3
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.||++ ||++|+.+.|.|+++..++ +..||+++.+ + ++.+|+++ +||+++ .+|+.
T Consensus 3 vv~f~a~--------~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~---~------l~~~~g~~-vPtl~~-~~G~~ 58 (87)
T 1ttz_A 3 LTLYQRD--------DCHLCDQAVEALAQARAGA-----FFSVFIDDDA---A------LESAYGLR-VPVLRD-PMGRE 58 (87)
T ss_dssp EEEEECS--------SCHHHHHHHHHHHHTTCCC-----EEEEECTTCH---H------HHHHHTTT-CSEEEC-TTCCE
T ss_pred EEEEECC--------CCchHHHHHHHHHHHHHhh-----eEEEECCCCH---H------HHHHhCCC-cCeEEE-ECCEE
Confidence 6789997 9999999999999875433 6889998865 2 66789998 999998 78877
Q ss_pred eEEecCcchhcHHHHHHhhhc
Q 032841 111 SGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+. |. ...+.|+++|+.
T Consensus 59 v~---g~--~~~~~L~~~l~~ 74 (87)
T 1ttz_A 59 LD---WP--FDAPRLRAWLDA 74 (87)
T ss_dssp EE---SC--CCHHHHHHHHHT
T ss_pred Ee---CC--CCHHHHHHHHHH
Confidence 64 32 345567777653
No 157
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.49 E-value=5.8e-14 Score=101.94 Aligned_cols=82 Identities=13% Similarity=0.181 Sum_probs=63.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC----CCcEEEEEEeCCCcCccCCCCCccccccccccccce
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP----DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPT 101 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt 101 (132)
.++.+++.|||+ |||+|+.+.|.+++++..+. .++.+..||++... + ++.+|+|.++||
T Consensus 137 ~~~~~vv~F~a~--------wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~---~------~~~~~~V~~vPt 199 (243)
T 2hls_A 137 KGRVHIETIITP--------SCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP---D------IADKYGVMSVPS 199 (243)
T ss_dssp CSCEEEEEEECS--------SCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH---H------HHHHTTCCSSSE
T ss_pred CCCcEEEEEECC--------CCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH---H------HHHHcCCeeeCe
Confidence 466788999997 99999999999999988772 47999999988755 2 667899999999
Q ss_pred EEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 102 LFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+++ +|+.+ +.|.. ..+.|.++|.
T Consensus 200 ~~i--~G~~~--~~G~~--~~~~l~~~l~ 222 (243)
T 2hls_A 200 IAI--NGYLV--FVGVP--YEEDFLDYVK 222 (243)
T ss_dssp EEE--TTEEE--EESCC--CHHHHHHHHH
T ss_pred EEE--CCEEE--EeCCC--CHHHHHHHHH
Confidence 988 77643 55542 3344555543
No 158
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.48 E-value=1.7e-13 Score=94.94 Aligned_cols=80 Identities=11% Similarity=0.216 Sum_probs=60.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc--------CccC------------CC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP--------TWRN------------PQ 85 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~------------~~ 85 (132)
.+++++|+||++ ||++|+.+.|.++++.+++.+.+.++.|+++... .++. ..
T Consensus 32 ~gk~vlv~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 103 (188)
T 2cvb_A 32 HEPLLAVVFMCN--------HCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLD 103 (188)
T ss_dssp CSSEEEEEEECS--------SCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEEC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEEC
Confidence 579999999998 9999999999999999999755999999985321 0000 01
Q ss_pred CCccccccccccccceEEEEe-CCeEeEE
Q 032841 86 HPFRVNSRFKLTGVPTLFRWE-NDIVSGR 113 (132)
Q Consensus 86 ~~~~~~~~~~v~~vPt~~~~~-~g~~~~~ 113 (132)
....++..|+|.++||+++++ +|+.+.+
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 104 ETQEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp SSSHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred CcchHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 112256789999999999996 5777665
No 159
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=1e-13 Score=105.94 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=70.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc------CccC------------CCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP------TWRN------------PQH 86 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~------~~~~------------~~~ 86 (132)
.+++++|+||++ ||++|+.+.|.+.++.+++++ ++.++.|+++... .|+. ...
T Consensus 81 ~GK~vLl~F~at--------wC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~ 152 (352)
T 2hyx_A 81 RGKVVLIDFWAY--------SCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDN 152 (352)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECT
T ss_pred CCCEEEEEEECC--------CChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCC
Confidence 589999999998 999999999999999998864 6999999876421 0000 001
Q ss_pred CccccccccccccceEEEEe-CCeEeEEecCcc--hhcHHHHHHhh
Q 032841 87 PFRVNSRFKLTGVPTLFRWE-NDIVSGRLEDHE--AHLEHKIKALL 129 (132)
Q Consensus 87 ~~~~~~~~~v~~vPt~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l 129 (132)
...+++.|+|.++||+++++ +|+++.++.|.. ...++.|++++
T Consensus 153 ~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 153 NYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred cHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 12256789999999999995 688888888752 23344455544
No 160
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.47 E-value=2.9e-13 Score=92.58 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=67.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCC--------CcC---cc--CCCCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGD--------RPT---WR--NPQHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~--------~~~---~~--~~~~~~~~~ 91 (132)
.|++++|+|||+ ||++|+ ..|.+.++.+++. .++.++.|+++. ... +. .....|.+.
T Consensus 31 ~Gk~vll~F~a~--------wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~ 101 (171)
T 3cmi_A 31 KGKVVLIVNVAS--------KCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIM 101 (171)
T ss_dssp TTCEEEEEEEES--------SSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBB
T ss_pred CCCEEEEEEEec--------CCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEE
Confidence 689999999998 999999 9999999999886 359999998741 111 11 000011110
Q ss_pred -------------------ccccccccc------eEEEEe-CCeEeEEecCc--chhcHHHHHHhhhc
Q 032841 92 -------------------SRFKLTGVP------TLFRWE-NDIVSGRLEDH--EAHLEHKIKALLSA 131 (132)
Q Consensus 92 -------------------~~~~v~~vP------t~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~~ 131 (132)
..|++.++| ++++++ +|+.+.++.|. .....+.|++++++
T Consensus 102 ~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (171)
T 3cmi_A 102 KKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLKE 169 (171)
T ss_dssp CCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHTC
T ss_pred eeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 247899999 777775 68888888774 33456677777653
No 161
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.46 E-value=1.8e-13 Score=94.37 Aligned_cols=81 Identities=15% Similarity=0.320 Sum_probs=61.9
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC-cc----CC---------CCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT-WR----NP---------QHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~-~~----~~---------~~~~~~~ 91 (132)
.+++++|+||++ ||++|+.+.|.++++.++ ++.++.|++++..+ |+ .. ...-.++
T Consensus 57 ~gk~vll~F~a~--------~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (176)
T 3kh7_A 57 KGKPALVNVWGT--------WCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLG 125 (176)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHH
T ss_pred CCCEEEEEEECC--------cCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHH
Confidence 589999999998 999999999999999876 58999999765331 10 00 0011245
Q ss_pred ccccccccceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
..|+|.++|++++++ +|+.+.++.|.
T Consensus 126 ~~~~v~~~P~~~lid~~G~i~~~~~g~ 152 (176)
T 3kh7_A 126 LDLGVYGAPETYLIDKQGIIRHKIVGV 152 (176)
T ss_dssp HHHTCCSSCEEEEECTTCBEEEEEESC
T ss_pred HHcCCCCCCeEEEECCCCeEEEEEcCC
Confidence 689999999888886 68888888776
No 162
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.45 E-value=2.2e-13 Score=94.68 Aligned_cols=80 Identities=13% Similarity=0.267 Sum_probs=60.0
Q ss_pred CCC-eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCc--------CccC------C-----
Q 032841 26 KNK-ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRP--------TWRN------P----- 84 (132)
Q Consensus 26 ~~~-~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~--------~~~~------~----- 84 (132)
.++ +++|+||++ ||++|+.+.|.+.++.+++.+ ++.++.|+++... .++. .
T Consensus 44 ~gk~~vlv~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~ 115 (196)
T 2ywi_A 44 KSDAATVIMFICN--------HCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYL 115 (196)
T ss_dssp CCSSEEEEEECCS--------SCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEE
T ss_pred CCCCeEEEEEeCC--------CCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEE
Confidence 466 599999998 999999999999999988863 5999999986421 0000 0
Q ss_pred -CCCccccccccccccceEEEEe-CCeEeEE
Q 032841 85 -QHPFRVNSRFKLTGVPTLFRWE-NDIVSGR 113 (132)
Q Consensus 85 -~~~~~~~~~~~v~~vPt~~~~~-~g~~~~~ 113 (132)
.....++..|+|.++||+++++ +|+.+.+
T Consensus 116 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 116 YDETQEVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp ECSSCHHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred ECCchHHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 0111255789999999999996 6877766
No 163
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.45 E-value=1.4e-13 Score=93.43 Aligned_cols=83 Identities=12% Similarity=0.180 Sum_probs=63.8
Q ss_pred CCCe-EEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcCccC----CC--------CCccc
Q 032841 26 KNKA-NFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPTWRN----PQ--------HPFRV 90 (132)
Q Consensus 26 ~~~~-v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~~~~----~~--------~~~~~ 90 (132)
.++. ++|+|| |+ |||+|+...|.+.++.+++. .++.++.|+++....++. .. ....+
T Consensus 27 ~gk~~vvl~F~~a~--------~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (161)
T 3drn_A 27 IGKHNIVLYFYPKD--------DTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKI 98 (161)
T ss_dssp TTTSEEEEEECSCT--------TCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHH
T ss_pred cCCCCEEEEEEcCC--------CCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHH
Confidence 5676 999999 97 99999999999999999886 359999999875321110 00 11125
Q ss_pred cccccccc----cceEEEEe-CCeEeEEecC
Q 032841 91 NSRFKLTG----VPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 91 ~~~~~v~~----vPt~~~~~-~g~~~~~~~~ 116 (132)
++.|++.+ +|++++++ +|+.+.++.|
T Consensus 99 ~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 99 RELYGAKGFILPARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp HHHTTCCCSSSCCCEEEEECTTSBEEEEEEC
T ss_pred HHHcCCCCcCcccceEEEECCCCEEEEEEec
Confidence 67899999 99999996 6888888887
No 164
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.44 E-value=1.4e-13 Score=98.14 Aligned_cols=80 Identities=11% Similarity=0.025 Sum_probs=62.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC--CCCcEEEEEEeCCCcCccCCCCCccccccccccccceEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS--PDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLF 103 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~ 103 (132)
..++++|.||.+.+ ..|||++|+.+.|.+.++++++ .+++.++.||++... + ++.+|+|+++||++
T Consensus 19 ~~~~v~v~~~~~~~---~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~---~------l~~~~~v~~~Ptl~ 86 (229)
T 2ywm_A 19 FKEPVSIKLFSQAI---GCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK---E------ETEKYGVDRVPTIV 86 (229)
T ss_dssp CCSCEEEEEECCCT---TCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH---H------HHHHTTCCBSSEEE
T ss_pred ccCCeEEEEEccCC---CCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH---H------HHHHcCCCcCcEEE
Confidence 34566666663200 1259999999999999997776 568999999988765 3 88899999999999
Q ss_pred EEeCCeEeEEecCc
Q 032841 104 RWENDIVSGRLEDH 117 (132)
Q Consensus 104 ~~~~g~~~~~~~~~ 117 (132)
+|++|+...++.|.
T Consensus 87 ~~~~~~~~~~~~G~ 100 (229)
T 2ywm_A 87 IEGDKDYGIRYIGL 100 (229)
T ss_dssp EESSSCCCEEEESC
T ss_pred EECCCcccceecCC
Confidence 99877777788776
No 165
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.44 E-value=5.6e-13 Score=90.54 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=68.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChh-HHhhhHHHHHHHHhCCC----CcEEEEEEeCCCcC----ccC----CCCCc----
Q 032841 26 KNKANFILFLADKDPSTSLSWCPD-CVRAEPVIYKTLEASPD----DIALLQAYVGDRPT----WRN----PQHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~-C~~~~p~~~~~~~~~~~----~~~~~~v~~~~~~~----~~~----~~~~~---- 88 (132)
.+++++|+||++ ||++ |+...|.+.++.+++.+ ++.++.|+++...+ ++. ....|
T Consensus 34 ~gk~vll~f~~~--------~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~ 105 (172)
T 2k6v_A 34 QDKVVLLFFGFT--------RCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLS 105 (172)
T ss_dssp TTSEEEEEEECT--------TCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEEC
T ss_pred CCCEEEEEEECC--------CCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEe
Confidence 689999999998 9997 99999999999998873 79999999875320 000 00000
Q ss_pred -------cc---------------cccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 89 -------RV---------------NSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 89 -------~~---------------~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+ ...|++.++||++++++|+.+.++.|......+.|.+.|+
T Consensus 106 d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~ 169 (172)
T 2k6v_A 106 GSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQ 169 (172)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHH
Confidence 11 1235678999999999888888777654224555666554
No 166
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.42 E-value=5e-13 Score=95.25 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=59.6
Q ss_pred CCC-eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCCcC--------ccC------C-----
Q 032841 26 KNK-ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDRPT--------WRN------P----- 84 (132)
Q Consensus 26 ~~~-~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~~~--------~~~------~----- 84 (132)
.++ +++|+|||+ |||+|+...|.+.++.+++.+ ++.++.|+++.... ++. .
T Consensus 57 ~gk~~vll~F~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l 128 (218)
T 3u5r_E 57 KDSPALLVAFISN--------RCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYL 128 (218)
T ss_dssp TTCSEEEEEECCS--------SCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEE
T ss_pred CCCCeEEEEEECC--------CCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEE
Confidence 466 599999998 999999999999999999874 59999999863210 000 0
Q ss_pred -CCCccccccccccccceEEEEe-CCeEeEE
Q 032841 85 -QHPFRVNSRFKLTGVPTLFRWE-NDIVSGR 113 (132)
Q Consensus 85 -~~~~~~~~~~~v~~vPt~~~~~-~g~~~~~ 113 (132)
+..-.++..|+|.++|++++++ +|+.+.+
T Consensus 129 ~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 129 KDASQSVAKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp ECTTCHHHHHHTCCEESEEEEECTTCBEEEE
T ss_pred ECCccHHHHHcCCCCCCeEEEECCCCcEEEe
Confidence 0111256789999999999996 5776644
No 167
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.41 E-value=5.4e-13 Score=92.81 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=66.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCC--------CcCccC----C-CCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGD--------RPTWRN----P-QHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~--------~~~~~~----~-~~~~~~~ 91 (132)
.|++++|+|||+ |||+|+...|.+.++.+++.+ ++.++.|+++. ...++. . ...|.+.
T Consensus 45 ~Gk~vlv~F~at--------wC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 116 (187)
T 3dwv_A 45 KGSPLLIYNVAS--------KCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 116 (187)
T ss_dssp TTSCEEEEEECC--------BCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBB
T ss_pred CCCEEEEEEecC--------CCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCcee
Confidence 689999999998 999999999999999998863 59999999863 111110 0 1111110
Q ss_pred ----------------------ccccccccc---eEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 92 ----------------------SRFKLTGVP---TLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 92 ----------------------~~~~v~~vP---t~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
..+++.++| ++++++ +|+.+.++.|.. ...++.|+++|+
T Consensus 117 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 117 AKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred eccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 234566778 888885 688888887752 234455655554
No 168
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.41 E-value=1.4e-13 Score=93.89 Aligned_cols=88 Identities=14% Similarity=0.041 Sum_probs=61.9
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCCcCccCCCCC
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDRPTWRNPQHP 87 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 87 (132)
.+|++.++...+ .+|+++|+|+++ ||.+|+.|...+ .++.+.+.+++.++.+|++... +
T Consensus 29 ~~~~~Al~~Ak~---~~K~vlvd~~a~--------wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~---~---- 90 (153)
T 2dlx_A 29 GSFETAKECGQM---QNKWLMINIQNV--------QDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE---G---- 90 (153)
T ss_dssp SCHHHHHHHHHH---HTCEEEEEEECS--------CTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHH---H----
T ss_pred cCHHHHHHHHHH---cCCeEEEEEECC--------CCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHh---H----
Confidence 466666544433 789999999998 999999996543 2233333337888999985522 1
Q ss_pred ccccccccccccceEEEEeC--CeEeEEecC
Q 032841 88 FRVNSRFKLTGVPTLFRWEN--DIVSGRLED 116 (132)
Q Consensus 88 ~~~~~~~~v~~vPt~~~~~~--g~~~~~~~~ 116 (132)
..+.++|++.++||+++++. |+++.++.|
T Consensus 91 ~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g 121 (153)
T 2dlx_A 91 QRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ 121 (153)
T ss_dssp HHHHHHHTCCSSSEEEEECTTTCCCCEEESS
T ss_pred HHHHHHcCCCCCCEEEEEeCCCCcEeeecCC
Confidence 11557899999999999984 667777655
No 169
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.40 E-value=6.1e-14 Score=90.21 Aligned_cols=85 Identities=12% Similarity=0.164 Sum_probs=53.2
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEe
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWE 106 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~ 106 (132)
++++++ ||++ |||+|+.+.|.++++... +.++.|+.+... .+ ..-.++..|++.++||+ |.
T Consensus 19 ~~~vv~-f~a~--------~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~--~~--~~~~l~~~~~v~~~Pt~--~~ 79 (116)
T 2e7p_A 19 SAPVVV-FSKT--------YCGYCNRVKQLLTQVGAS----YKVVELDELSDG--SQ--LQSALAHWTGRGTVPNV--FI 79 (116)
T ss_dssp SSSEEE-EECT--------TCHHHHHHHHHHHHHTCC----CEEEEGGGSTTH--HH--HHHHHHHHHSCCSSCEE--EE
T ss_pred CCCEEE-EECC--------CChhHHHHHHHHHHcCCC----eEEEEccCCCCh--HH--HHHHHHHHhCCCCcCEE--EE
Confidence 456666 9997 999999999999988533 344444433320 00 00015568999999999 45
Q ss_pred CCeEeEEecCcc-hhcHHHHHHhhh
Q 032841 107 NDIVSGRLEDHE-AHLEHKIKALLS 130 (132)
Q Consensus 107 ~g~~~~~~~~~~-~~~~~~l~~~l~ 130 (132)
+|+.++++.|.. ....+.|.++|+
T Consensus 80 ~g~~v~~~~~~~~~~~~~~l~~~l~ 104 (116)
T 2e7p_A 80 GGKQIGGCDTVVEKHQRNELLPLLQ 104 (116)
T ss_dssp TTEEEECHHHHHHHHHTTCHHHHHH
T ss_pred CCEEECChHHHHHHHhCChHHHHHH
Confidence 888777665542 113445666654
No 170
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.38 E-value=6.5e-13 Score=89.55 Aligned_cols=97 Identities=11% Similarity=0.215 Sum_probs=68.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChh-HHhhhHHHHHHHHhCC-----CCcEEEEEEeCCCcC----c----cCCCCCc---
Q 032841 26 KNKANFILFLADKDPSTSLSWCPD-CVRAEPVIYKTLEASP-----DDIALLQAYVGDRPT----W----RNPQHPF--- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~-C~~~~p~~~~~~~~~~-----~~~~~~~v~~~~~~~----~----~~~~~~~--- 88 (132)
.|++++|+||++ ||++ |+...|.+.++.+++. .++.++.|+++.... + +.-...|
T Consensus 22 ~gk~vll~f~~~--------~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l 93 (164)
T 2ggt_A 22 LGQWLLIYFGFT--------HCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGL 93 (164)
T ss_dssp TTCEEEEEEECT--------TCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEE
T ss_pred CCCEEEEEEEeC--------CCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEE
Confidence 589999999998 9998 9999999999988764 378999999875320 0 0000011
Q ss_pred --------cccccccccccc---------------eEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 89 --------RVNSRFKLTGVP---------------TLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 89 --------~~~~~~~v~~vP---------------t~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
.+++.|+|.++| ++++++ +|+.+.++.|.. ....+.|+++++
T Consensus 94 ~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 94 TGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp ECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred eCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 245689999999 677775 688888877652 233444555544
No 171
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.38 E-value=6e-13 Score=92.71 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=66.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCC--------cC---cc--CCCCCccc-
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDR--------PT---WR--NPQHPFRV- 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~--------~~---~~--~~~~~~~~- 90 (132)
.+++++|+|||+ |||+|+...|.+.++.+++. .++.++.|+++.. .. +. .....|.+
T Consensus 47 ~Gk~vll~F~at--------wC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l 118 (190)
T 2vup_A 47 KGSPLLIYNVAS--------KCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 118 (190)
T ss_dssp TTSCEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCCEEEEEEecC--------CCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEE
Confidence 689999999998 99999999999999999886 3599999998731 00 00 00000100
Q ss_pred ---------c---------ccccccccc------eEEEEe-CCeEeEEecCc--chhcHHHHHHhhh
Q 032841 91 ---------N---------SRFKLTGVP------TLFRWE-NDIVSGRLEDH--EAHLEHKIKALLS 130 (132)
Q Consensus 91 ---------~---------~~~~v~~vP------t~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~ 130 (132)
+ ..|++.++| ++++++ +|+.+.++.|. .....+.|+++++
T Consensus 119 ~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 119 AKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp CCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred eecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 0 135899999 777775 68888888775 2233455666554
No 172
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=4.1e-14 Score=95.38 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHH-HHHhCC--CCcEEEEEEeCCCc-CccCCC----C--------Ccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYK-TLEASP--DDIALLQAYVGDRP-TWRNPQ----H--------PFR 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~-~~~~~~--~~~~~~~v~~~~~~-~~~~~~----~--------~~~ 89 (132)
.+++++|+|||+ |||+|+.+.|.+.+ +.+++. .++.++.|+++... .++.-. . .-.
T Consensus 32 ~gk~vll~f~a~--------~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 103 (159)
T 2ls5_A 32 RGKVVMLQFTAS--------WCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGAD 103 (159)
Confidence 578999999998 99999999999998 877765 57899999887643 121100 0 012
Q ss_pred cccccc--ccccceEEEEe-CCeEeEEecCc
Q 032841 90 VNSRFK--LTGVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 90 ~~~~~~--v~~vPt~~~~~-~g~~~~~~~~~ 117 (132)
+++.|+ +.++||+++++ +|+.+.+..|.
T Consensus 104 ~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~ 134 (159)
T 2ls5_A 104 IFAKYALRDAGITRNVLIDREGKIVKLTRLY 134 (159)
Confidence 345677 56799999995 68777777664
No 173
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.37 E-value=8.4e-13 Score=89.67 Aligned_cols=97 Identities=6% Similarity=0.219 Sum_probs=67.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChh-HHhhhHHHHHHHHhCC-----CCcEEEEEEeCCCcC-------c-cCCCCCc---
Q 032841 26 KNKANFILFLADKDPSTSLSWCPD-CVRAEPVIYKTLEASP-----DDIALLQAYVGDRPT-------W-RNPQHPF--- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~-C~~~~p~~~~~~~~~~-----~~~~~~~v~~~~~~~-------~-~~~~~~~--- 88 (132)
.+++++|+||++ ||++ |+...|.+.++.+++. .++.++.|+++.... | +.....|
T Consensus 25 ~gk~vll~F~~~--------~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l 96 (171)
T 2rli_A 25 RGQWVLMYFGFT--------HCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGL 96 (171)
T ss_dssp TTSEEEEEEECT--------TCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEE
T ss_pred CCCEEEEEEEcC--------CCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEE
Confidence 589999999998 9998 9999999999988773 479999999874210 0 0000011
Q ss_pred --------cccccccccccc---------------eEEEEe-CCeEeEEecCcc--hhcHHHHHHhhh
Q 032841 89 --------RVNSRFKLTGVP---------------TLFRWE-NDIVSGRLEDHE--AHLEHKIKALLS 130 (132)
Q Consensus 89 --------~~~~~~~v~~vP---------------t~~~~~-~g~~~~~~~~~~--~~~~~~l~~~l~ 130 (132)
.+++.|+|.++| ++++++ +|+.+.++.|.. ....+.|+++++
T Consensus 97 ~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 97 TGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp ECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 245679998888 777775 688888877752 223344554443
No 174
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.36 E-value=1.4e-12 Score=87.94 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=63.0
Q ss_pred CCC-eEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcCc--------------cCCCCCc
Q 032841 26 KNK-ANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPTW--------------RNPQHPF 88 (132)
Q Consensus 26 ~~~-~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~~--------------~~~~~~~ 88 (132)
.++ +++|+|| |+ ||++|+...|.+.++.+++. .++.++.|+++....+ .+.....
T Consensus 34 ~gk~~vvl~F~~a~--------~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 105 (160)
T 1xvw_A 34 RGAKNVLLVFFPLA--------FTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHG 105 (160)
T ss_dssp TTTCEEEEEECSCT--------TSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTT
T ss_pred cCCCCEEEEEECCC--------CCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcCh
Confidence 466 9999998 97 99999999999999999986 4799999998752210 0100012
Q ss_pred ccccccccc----ccc--eEEEEe-CCeEeEEecCc
Q 032841 89 RVNSRFKLT----GVP--TLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ~~~~~~~v~----~vP--t~~~~~-~g~~~~~~~~~ 117 (132)
.+++.|++. ++| ++++++ +|+.+.+..|.
T Consensus 106 ~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~ 141 (160)
T 1xvw_A 106 AVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQ 141 (160)
T ss_dssp HHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECC
T ss_pred HHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecC
Confidence 256789999 999 676775 68888888776
No 175
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.36 E-value=7.3e-13 Score=89.79 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=68.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCCC--------cCc----c-CCCCCcccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGDR--------PTW----R-NPQHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~~--------~~~----~-~~~~~~~~~ 91 (132)
.+++++|+||++ ||++|+...|.+.++.+++.+ ++.++.|+++.. ..+ + .-...|.+.
T Consensus 31 ~gk~vll~f~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (170)
T 2p5q_A 31 KGKVLLIVNVAS--------KCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIF 102 (170)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBB
T ss_pred CCCEEEEEEEec--------cCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeE
Confidence 689999999998 999999999999999998863 599999998631 000 0 001111110
Q ss_pred -------------------ccccc--cccc---eEEEEe-CCeEeEEecCc--chhcHHHHHHhhhc
Q 032841 92 -------------------SRFKL--TGVP---TLFRWE-NDIVSGRLEDH--EAHLEHKIKALLSA 131 (132)
Q Consensus 92 -------------------~~~~v--~~vP---t~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~~ 131 (132)
..+++ .++| ++++++ +|+.+.++.|. .....+.|++++++
T Consensus 103 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 103 DKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp CCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred eeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 01266 7889 777775 68888888775 23456677777654
No 176
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.34 E-value=2.9e-12 Score=86.75 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=67.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCC----c-------Cc--cCCCCCccc-
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDR----P-------TW--RNPQHPFRV- 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~----~-------~~--~~~~~~~~~- 90 (132)
.|++++|+||++ |||+|+...|.+.++.+++. .++.++.|+++.. . .+ +.-...|.+
T Consensus 30 ~gk~vlv~f~a~--------~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (169)
T 2v1m_A 30 RGHVCLIVNVAC--------KCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMF 101 (169)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEB
T ss_pred CCCEEEEEEeec--------cCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceE
Confidence 689999999998 99999999999999999886 3699999998631 0 11 100001110
Q ss_pred ---------c-ccc--------c-----ccccceEEEEe-CCeEeEEecCc--chhcHHHHHHhhhc
Q 032841 91 ---------N-SRF--------K-----LTGVPTLFRWE-NDIVSGRLEDH--EAHLEHKIKALLSA 131 (132)
Q Consensus 91 ---------~-~~~--------~-----v~~vPt~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~~ 131 (132)
+ ..| + |+.+|++++++ +|+.+.++.|. .....+.|++++++
T Consensus 102 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 102 SKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp CCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred EEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 0 012 4 55578888886 68888888775 34556777777765
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.33 E-value=5e-12 Score=100.53 Aligned_cols=81 Identities=19% Similarity=0.217 Sum_probs=65.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
.++..++.||++ |||+|+.+.|.+++++..++ ++.+..+|++..+ + ++.+|+|.++||+++
T Consensus 116 ~~~~~i~~f~a~--------~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~---~------~~~~~~i~svPt~~i- 176 (521)
T 1hyu_A 116 DGDFEFETYYSL--------SCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQ---N------EITERNVMGVPAVFV- 176 (521)
T ss_dssp CSCEEEEEEECT--------TCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCH---H------HHHHTTCCSSSEEEE-
T ss_pred CCCcceEEEECC--------CCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhH---H------HHHHhCCCccCEEEE-
Confidence 456778899997 99999999999999998887 8999999998766 3 778999999999977
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+|+.+.+ |. ...+.|.+++.
T Consensus 177 -~g~~~~~--G~--~~~~~l~~~l~ 196 (521)
T 1hyu_A 177 -NGKEFGQ--GR--MTLTEIVAKVD 196 (521)
T ss_dssp -TTEEEEE--SC--CCHHHHHHHHC
T ss_pred -CCEEEec--CC--CCHHHHHHHHh
Confidence 8877755 43 44556666654
No 178
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.32 E-value=5.5e-12 Score=89.51 Aligned_cols=43 Identities=14% Similarity=0.042 Sum_probs=39.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~ 76 (132)
.+++++|+|||+ |||+|+...|.|+++.+++. .++.++.|+++
T Consensus 46 ~Gk~vlv~Fwat--------wC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVAS--------LGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 689999999998 99999999999999999886 45899999886
No 179
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.32 E-value=2.3e-12 Score=88.95 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=39.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC-CcEEEEEEeCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD-DIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~-~~~~~~v~~~~ 77 (132)
.|++++|+|||+ |||+|+...|.+.++.+++++ ++.++.|+++.
T Consensus 37 ~Gk~vlv~F~at--------wC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVAS--------DCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEec--------CCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 689999999998 999999999999999999874 58999998764
No 180
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.32 E-value=1.7e-12 Score=90.81 Aligned_cols=84 Identities=12% Similarity=0.230 Sum_probs=63.9
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CC------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QH------ 86 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~------ 86 (132)
.+++++|+|| |+ ||++|+...|.+.++.+++. .++.++.|+++... .|... ..
T Consensus 32 ~gk~vvl~F~~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (198)
T 1zof_A 32 GKNGVILFFWPKD--------FTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVA 103 (198)
T ss_dssp CSSEEEEEECSCT--------TCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEE
T ss_pred CCCcEEEEEECCC--------CCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEE
Confidence 5789999999 87 99999999999999988875 46999999987521 01000 00
Q ss_pred --Ccccccccccc-----ccceEEEEe-CCeEeEEecCc
Q 032841 87 --PFRVNSRFKLT-----GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 87 --~~~~~~~~~v~-----~vPt~~~~~-~g~~~~~~~~~ 117 (132)
...+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 104 d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~ 142 (198)
T 1zof_A 104 DITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVIND 142 (198)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEES
T ss_pred CCchHHHHHhCCcccCCcccceEEEECCCCEEEEEEecC
Confidence 11245789999 999999996 68888877664
No 181
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.31 E-value=1.6e-12 Score=90.12 Aligned_cols=84 Identities=12% Similarity=0.210 Sum_probs=64.3
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-C------------CCC
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-P------------QHP 87 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~------------~~~ 87 (132)
.+++++|+|| |+ ||++|+...|.+.++.+++. .++.++.|+++... .|.. . ...
T Consensus 30 ~gk~vvl~F~~a~--------~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 101 (187)
T 1we0_A 30 KGKWSIVVFYPAD--------FSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPS 101 (187)
T ss_dssp SSSEEEEEECSCT--------TCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTT
T ss_pred CCCCEEEEEECCC--------CCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCc
Confidence 5799999999 98 99999999999999998876 47999999987521 0100 0 001
Q ss_pred cccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 88 FRVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 88 ~~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
..+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecC
Confidence 2255689999 999999996 68888887664
No 182
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.31 E-value=2.2e-12 Score=90.17 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=64.3
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---Ccc-------CC------CCC
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWR-------NP------QHP 87 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~-------~~------~~~ 87 (132)
.+++++|+|| ++ ||++|+...|.+.++.+++. .++.++.|+++... .|. .. ...
T Consensus 44 ~gk~vvl~F~~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 115 (195)
T 2bmx_A 44 PGKWRVVFFWPKD--------FTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIK 115 (195)
T ss_dssp TTCEEEEEECSCT--------TSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTT
T ss_pred CCCcEEEEEEcCC--------CCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCc
Confidence 5789999999 98 99999999999999998876 36999999987521 010 00 011
Q ss_pred cccccccccc-----ccceEEEEe-CCeEeEEecCc
Q 032841 88 FRVNSRFKLT-----GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 88 ~~~~~~~~v~-----~vPt~~~~~-~g~~~~~~~~~ 117 (132)
..+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~ 151 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATA 151 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEEC
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecC
Confidence 2245679999 999999996 68888877664
No 183
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.30 E-value=2.4e-12 Score=87.04 Aligned_cols=84 Identities=12% Similarity=0.027 Sum_probs=62.1
Q ss_pred CCCeEEEEEEe-eCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcCccC------C------CCCcccc
Q 032841 26 KNKANFILFLA-DKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPTWRN------P------QHPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a-~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~~~~------~------~~~~~~~ 91 (132)
.|++++|+||+ + |||+|+...|.+.++.+++. .++.++.|+++....++. . +....++
T Consensus 34 ~gk~~vl~F~~~~--------~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (163)
T 3gkn_A 34 AGHWLVIYFYPKD--------STPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC 105 (163)
T ss_dssp TTSCEEEEECSCT--------TSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH
T ss_pred CCCcEEEEEeCCC--------CCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH
Confidence 57899999998 6 99999999999999998876 468999999874321110 0 0111245
Q ss_pred ccccccc------------cceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLTG------------VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~------------vPt~~~~~-~g~~~~~~~~~ 117 (132)
+.|++.. +|++++++ +|+.+.++.+.
T Consensus 106 ~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~ 144 (163)
T 3gkn_A 106 RAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKV 144 (163)
T ss_dssp HHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSC
T ss_pred HHhCCccccccccccccCcceEEEEECCCCeEEEEEcCC
Confidence 6788877 99999997 57777666444
No 184
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.29 E-value=9.7e-13 Score=79.69 Aligned_cols=63 Identities=19% Similarity=0.306 Sum_probs=45.6
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.||++ |||+|+++.|.++++.++++ +.+..++++...+..+ ++.+||++++||+++ +|+.
T Consensus 4 ~~~f~~~--------~C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~~~~~~------~~~~~gv~~vPt~~i--~g~~ 65 (80)
T 2k8s_A 4 KAIFYHA--------GCPVCVSAEQAVANAIDPSK--YTVEIVHLGTDKARIA------EAEKAGVKSVPALVI--DGAA 65 (80)
T ss_dssp EEEEEEC--------SCHHHHHHHHHHHHHSCTTT--EEEEEEETTTCSSTHH------HHHHHTCCEEEEEEE--TTEE
T ss_pred eEEEeCC--------CCCchHHHHHHHHHHHHhcC--CeEEEEEecCChhhHH------HHHHcCCCcCCEEEE--CCEE
Confidence 6788897 99999999999999987764 4455555553211011 567899999999977 7764
Q ss_pred e
Q 032841 111 S 111 (132)
Q Consensus 111 ~ 111 (132)
+
T Consensus 66 ~ 66 (80)
T 2k8s_A 66 F 66 (80)
T ss_dssp E
T ss_pred E
Confidence 3
No 185
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.29 E-value=2.7e-12 Score=88.35 Aligned_cols=81 Identities=9% Similarity=0.011 Sum_probs=60.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCC-ChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccC-CCC---------Ccccc
Q 032841 26 KNKANFILFLADKDPSTSLSW-CPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRN-PQH---------PFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pW-C~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~-~~~---------~~~~~ 91 (132)
.+++++|+||++ | |++|+...|.+.++.++ .++.++.|+++... .|.. ... .-.++
T Consensus 43 ~gk~vvl~F~~t--------~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 112 (175)
T 1xvq_A 43 RGKSVLLNIFPS--------VDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG 112 (175)
T ss_dssp TTSCEEEEECSC--------CCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH
T ss_pred CCCEEEEEEEeC--------CCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH
Confidence 578999999998 8 99999999999999988 58999999987422 1111 000 11245
Q ss_pred cccccccc---------ceEEEEe-CCeEeEEecC
Q 032841 92 SRFKLTGV---------PTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 92 ~~~~v~~v---------Pt~~~~~-~g~~~~~~~~ 116 (132)
+.|++..+ |++++++ +|+.+.+..|
T Consensus 113 ~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 113 EDYGVTIADGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp HHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred HHhCCcccccccCCcccceEEEECCCCeEEEEEEC
Confidence 67899887 8888886 6888887764
No 186
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=85.61 Aligned_cols=95 Identities=6% Similarity=0.052 Sum_probs=64.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCC--------cCcc----C-CCCCccc-
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDR--------PTWR----N-PQHPFRV- 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~--------~~~~----~-~~~~~~~- 90 (132)
.|++++|+|||+ |||+|+...|.++++.+++. .++.++.|+++.. ..++ . ....|.+
T Consensus 48 ~Gk~vlv~F~at--------wC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 119 (181)
T 2p31_A 48 RGSVSLVVNVAS--------ECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMF 119 (181)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCCEEEEEEecc--------CCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeE
Confidence 689999999998 99999999999999999886 3599999998641 1100 0 0001111
Q ss_pred ---------cc---cccccccc-------eEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 91 ---------NS---RFKLTGVP-------TLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 91 ---------~~---~~~v~~vP-------t~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+. .|.+.++| +.++++ +|+.+.++.|.. ..+.|.+.|+
T Consensus 120 ~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~--~~~~l~~~i~ 177 (181)
T 2p31_A 120 SKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTV--SVEEVRPQIT 177 (181)
T ss_dssp CCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTS--CHHHHHHHHH
T ss_pred eecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCC--CHHHHHHHHH
Confidence 11 35588999 666665 688888887752 2334555443
No 187
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.28 E-value=1.7e-11 Score=83.20 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=62.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCC-ChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccC----CCC----------Cccc
Q 032841 26 KNKANFILFLADKDPSTSLSW-CPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRN----PQH----------PFRV 90 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pW-C~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~----------~~~~ 90 (132)
.+++++|.||++ | |++|+...|.+.++.+++ .++.++.|+.+....++. ... .-.+
T Consensus 43 ~gk~~vl~F~~~--------~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 113 (167)
T 2jsy_A 43 KGKVTIISVIPS--------IDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSF 113 (167)
T ss_dssp TTSCEEEEECSC--------STTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHH
T ss_pred CCCeEEEEEecC--------CCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHH
Confidence 578999999998 9 999999999999999988 689999999975332211 000 1123
Q ss_pred cccccccc------cceEEEEe-CCeEeEEecCc
Q 032841 91 NSRFKLTG------VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~------vPt~~~~~-~g~~~~~~~~~ 117 (132)
++.|++.. .|++++++ +|+.+.+..|.
T Consensus 114 ~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 114 GEAFGVYIKELRLLARSVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp HHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECS
T ss_pred HHHhCCccccCCceeeEEEEEcCCCcEEEEEecC
Confidence 45688887 49998887 58888887654
No 188
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.27 E-value=1e-11 Score=90.01 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=62.9
Q ss_pred HHHhhhCCCCCeEEEEEEeeCCCCCCCCC--ChhHHhhhHHHHHHHHhCC---CC--cEEEEEEeCCCcCccCCCCCccc
Q 032841 18 DKFKSEAPKNKANFILFLADKDPSTSLSW--CPDCVRAEPVIYKTLEASP---DD--IALLQAYVGDRPTWRNPQHPFRV 90 (132)
Q Consensus 18 ~~~~~~~~~~~~v~v~F~a~~~~~~~~pW--C~~C~~~~p~~~~~~~~~~---~~--~~~~~v~~~~~~~~~~~~~~~~~ 90 (132)
+++++ .-+++++|.||+. | |++|+.+.|.++++++.++ ++ +.|+.+|+++.. + +
T Consensus 18 ~~~~~--~~~~pv~v~~~~~--------~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~---~------~ 78 (243)
T 2hls_A 18 RETLA--EMVNPVEVHVFLS--------KSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS---D------K 78 (243)
T ss_dssp HHHHT--TCCSCEEEEEEEC--------SSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH---H------H
T ss_pred HHHHH--hCCCCEEEEEEeC--------CCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH---H------H
Confidence 44554 3457999999997 9 9999999999999998764 12 899999987755 3 7
Q ss_pred cccccccccceEEEEeCCeEeEEecCc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~ 117 (132)
+.+|+|+++||++++ +| ..++.|.
T Consensus 79 ~~~~gv~~~Pt~~i~-~g--~~~~~G~ 102 (243)
T 2hls_A 79 FSEFKVERVPTVAFL-GG--EVRWTGI 102 (243)
T ss_dssp HHHTTCCSSSEEEET-TT--TEEEESC
T ss_pred HHhcCCCcCCEEEEE-CC--ceeEcCC
Confidence 789999999999999 55 5677665
No 189
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.27 E-value=7.3e-12 Score=94.77 Aligned_cols=90 Identities=13% Similarity=0.099 Sum_probs=68.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccc--cceEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTG--VPTLF 103 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~--vPt~~ 103 (132)
..++++|+|++. ||++|+.+.|.+.++++++.+++.|+.+|.+... ... +++.|||++ +||++
T Consensus 134 ~~~~~~v~F~~~--------~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~-~~~------~~~~fgi~~~~~P~~~ 198 (361)
T 3uem_A 134 EIKTHILLFLPK--------SVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTD-NQR------ILEFFGLKKEECPAVR 198 (361)
T ss_dssp SCCEEEEEECCS--------SSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGG-GHH------HHHHTTCCTTTCSEEE
T ss_pred CCCcEEEEEEeC--------CchhHHHHHHHHHHHHHHccCceEEEEecCChHH-HHH------HHHHcCCCccCCccEE
Confidence 345778999997 9999999999999999999888999999987311 112 678999998 99999
Q ss_pred EEeCCeEeEEecC-cchhcHHHHHHhhh
Q 032841 104 RWENDIVSGRLED-HEAHLEHKIKALLS 130 (132)
Q Consensus 104 ~~~~g~~~~~~~~-~~~~~~~~l~~~l~ 130 (132)
+++.|+...++.. .+..+.+.|++|++
T Consensus 199 ~~~~~~~~~ky~~~~~~~~~~~l~~fi~ 226 (361)
T 3uem_A 199 LITLEEEMTKYKPESEELTAERITEFCH 226 (361)
T ss_dssp EEECC--CCEECCSSCCCCHHHHHHHHH
T ss_pred EEEcCCcccccCCCccccCHHHHHHHHH
Confidence 9998665445542 13455667777765
No 190
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.25 E-value=6e-12 Score=79.69 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=55.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
...+.++.|+++ |||+|+++.|.|+++. .++.|..+|+++.. ++. ++.+|+ .++|+++
T Consensus 14 ~~~~~v~~f~~~--------~C~~C~~~~~~L~~l~----~~i~~~~vdi~~~~---~~e----l~~~~g-~~vP~l~-- 71 (100)
T 1wjk_A 14 RALPVLTLFTKA--------PCPLCDEAKEVLQPYK----DRFILQEVDITLPE---NST----WYERYK-FDIPVFH-- 71 (100)
T ss_dssp CCCCEEEEEECS--------SCHHHHHHHHHTSTTS----SSSEEEEEETTSST---THH----HHHHSS-SSCSEEE--
T ss_pred CCCCEEEEEeCC--------CCcchHHHHHHHHHhh----hCCeEEEEECCCcc---hHH----HHHHHC-CCCCEEE--
Confidence 456778899997 9999999999988764 24889999998211 111 567899 9999863
Q ss_pred eCCeEeEEecCcchhcHHHHHHhhh
Q 032841 106 ENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+|+.+ ...+ ...+.|+++|+
T Consensus 72 ~~g~~~-~~~g---~~~~~l~~~l~ 92 (100)
T 1wjk_A 72 LNGQFL-MMHR---VNTSKLEKQLR 92 (100)
T ss_dssp ESSSEE-EESS---CCHHHHHHHHH
T ss_pred ECCEEE-EecC---CCHHHHHHHHH
Confidence 467654 3334 34456666665
No 191
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.23 E-value=1.4e-11 Score=85.83 Aligned_cols=84 Identities=14% Similarity=0.282 Sum_probs=64.0
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CC------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QH------ 86 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~------ 86 (132)
.+++++|+|| ++ ||++|+...|.+.++.+++. .++.++.|+++... .|... ..
T Consensus 30 ~gk~vvl~F~~a~--------~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~ 101 (192)
T 2h01_A 30 GKKYVLLYFYPLD--------FTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLIS 101 (192)
T ss_dssp TTCEEEEEECSCS--------SCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEE
T ss_pred CCCeEEEEEECCC--------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEE
Confidence 5789999999 98 99999999999999988875 57999999987521 11110 11
Q ss_pred --Ccccccccccc-----ccceEEEEe-CCeEeEEecCc
Q 032841 87 --PFRVNSRFKLT-----GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 87 --~~~~~~~~~v~-----~vPt~~~~~-~g~~~~~~~~~ 117 (132)
...+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 102 D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 102 DISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp CTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGG
T ss_pred CCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCC
Confidence 11255789999 999999996 68887777664
No 192
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.23 E-value=9.1e-12 Score=86.03 Aligned_cols=43 Identities=7% Similarity=-0.006 Sum_probs=39.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~ 76 (132)
.+++++|+||++ |||+|+...|.+.++.+++. .++.++.|+++
T Consensus 46 ~gk~vll~F~at--------wC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVAS--------QCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCC--------CCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 689999999998 99999999999999999886 35999999886
No 193
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.22 E-value=2e-11 Score=85.36 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=63.3
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CC------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QH------ 86 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~------ 86 (132)
.+++++|+|| ++ ||++|+...|.+.++.+++. .++.++.|+++... .|... ..
T Consensus 33 ~gk~vvl~F~~a~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~ 104 (197)
T 1qmv_A 33 KGKYVVLFFYPLD--------FTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLA 104 (197)
T ss_dssp TTSEEEEEECSCT--------TSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEE
T ss_pred CCCeEEEEEECCC--------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEE
Confidence 5789999999 87 99999999999999998875 46999999997521 11100 11
Q ss_pred --Ccccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 87 --PFRVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 87 --~~~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.-.++..|++. ++|++++++ +|+.+.+..|.
T Consensus 105 D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~ 144 (197)
T 1qmv_A 105 DVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVND 144 (197)
T ss_dssp CTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCC
Confidence 11255789998 899998886 58877776664
No 194
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.22 E-value=1.8e-11 Score=86.03 Aligned_cols=84 Identities=12% Similarity=0.134 Sum_probs=63.4
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-C-------CC------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-P-------QH------ 86 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~-------~~------ 86 (132)
.+++++|+|| ++ ||++|+...|.+.++.+++. .++.++.|+++... .|.. . ..
T Consensus 35 ~gk~vvl~F~~~~--------~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~ 106 (202)
T 1uul_A 35 KGKWLVLFFYPMD--------FTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILA 106 (202)
T ss_dssp TTSEEEEEECSCT--------TCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEE
T ss_pred CCCeEEEEEECCC--------CCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEE
Confidence 5789999999 87 99999999999999998875 47999999987521 1100 0 00
Q ss_pred --Ccccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 87 --PFRVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 87 --~~~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
...+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 107 D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~ 146 (202)
T 1uul_A 107 DKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVND 146 (202)
T ss_dssp CTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCC
Confidence 12355779999 999999996 58777776654
No 195
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.22 E-value=9.3e-12 Score=92.80 Aligned_cols=75 Identities=13% Similarity=0.228 Sum_probs=52.8
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC-cCccCCCCCccccccccccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR-PTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
+++|||+ |||+|+++.|.+++++++++ .+.+|.++. .+..+ ++++|+|+++||+++ +|+
T Consensus 201 vV~F~A~--------WC~~Ck~l~p~le~lA~~l~----~Vd~d~~d~~~~~~~------la~~~gI~~vPT~~i--~G~ 260 (291)
T 3kp9_A 201 GTMYGAY--------WCPHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQ------ECTEAGITSYPTWII--NGR 260 (291)
T ss_dssp CEEEECT--------TCHHHHHHHHHHGGGGGGSC----EEESCSSCSSSCCCH------HHHTTTCCSTTEEEE--TTE
T ss_pred EEEEECC--------CCHHHHHHHHHHHHHHHHcC----EEEEeecCchhhHHH------HHHHcCCcccCeEEE--CCE
Confidence 6899997 99999999999999987663 333332111 10112 778999999999655 775
Q ss_pred EeEEecCcchhcHHHHHHhhh
Q 032841 110 VSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 110 ~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.|. .+.+.|++|++
T Consensus 261 ---~~~G~--~~~~~L~~~l~ 276 (291)
T 3kp9_A 261 ---TYTGV--RSLEALAVASG 276 (291)
T ss_dssp ---EEESC--CCHHHHHHHTC
T ss_pred ---EecCC--CCHHHHHHHHC
Confidence 36665 34567888775
No 196
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.21 E-value=8.3e-12 Score=75.84 Aligned_cols=66 Identities=20% Similarity=0.299 Sum_probs=49.1
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccccccc--ccccceEEEEeCC
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFK--LTGVPTLFRWEND 108 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--v~~vPt~~~~~~g 108 (132)
++.|+++ |||+|+++.+.++++..+++ ++.+..+|++..+. ..-.+...++ +.++|+++ .+|
T Consensus 3 v~~f~~~--------~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~-----~~~~l~~~~~~~~~~vP~i~--~~g 66 (85)
T 1ego_A 3 TVIFGRS--------GCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGI-----TKEDLQQKAGKPVETVPQIF--VDQ 66 (85)
T ss_dssp EEEECCT--------TSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTC-----CSHHHHHHTCCCSCCSCEEE--ETT
T ss_pred EEEEeCC--------CCCCHHHHHHHHHHHHhcCC-CceEEEEecccChH-----HHHHHHHHhCCCCceeCeEE--ECC
Confidence 5678886 99999999999999987765 68999999865331 0001556788 99999983 377
Q ss_pred eEeE
Q 032841 109 IVSG 112 (132)
Q Consensus 109 ~~~~ 112 (132)
+.++
T Consensus 67 ~~i~ 70 (85)
T 1ego_A 67 QHIG 70 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6543
No 197
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.20 E-value=3e-11 Score=82.11 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=66.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCCh-hHHhhhHHHHHHHHhCCC---CcEEEEEEeCCC---c-C---c-cCCCCCc---c-
Q 032841 26 KNKANFILFLADKDPSTSLSWCP-DCVRAEPVIYKTLEASPD---DIALLQAYVGDR---P-T---W-RNPQHPF---R- 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~-~C~~~~p~~~~~~~~~~~---~~~~~~v~~~~~---~-~---~-~~~~~~~---~- 89 (132)
.|++++|+||++ ||+ +|+...|.+.++.+++.+ ++.++.|+++.. . . | +.....| .
T Consensus 32 ~gk~vll~f~~~--------~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~ 103 (174)
T 1xzo_A 32 KGEVWLADFIFT--------NCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDF 103 (174)
T ss_dssp TTCCEEEEEECS--------CCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEE
T ss_pred CCCEEEEEEEcC--------CCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEE
Confidence 689999999998 999 999999999999887652 499999998732 1 0 1 0111111 0
Q ss_pred -------cc----------------ccccccccceEEEEe-CCeEeEEecCcc----hhcHHHHHHhhhc
Q 032841 90 -------VN----------------SRFKLTGVPTLFRWE-NDIVSGRLEDHE----AHLEHKIKALLSA 131 (132)
Q Consensus 90 -------~~----------------~~~~v~~vPt~~~~~-~g~~~~~~~~~~----~~~~~~l~~~l~~ 131 (132)
+. ..|++.++|++++++ +|+.+.++.|.. ....+.|++++++
T Consensus 104 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 104 LTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp EBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCC
T ss_pred EeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 00 124577899988886 588888887763 2334455555543
No 198
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.19 E-value=2.9e-11 Score=86.34 Aligned_cols=84 Identities=13% Similarity=0.203 Sum_probs=64.0
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CC------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QH------ 86 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~------ 86 (132)
.+++++|+|| ++ |||+|+...|.+.++.+++. .++.++.|+++... .|... ..
T Consensus 55 ~Gk~vll~F~pa~--------~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (220)
T 1zye_A 55 KGKYLVLFFYPLD--------FTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLS 126 (220)
T ss_dssp TTSEEEEEECSCT--------TCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEE
T ss_pred CCCeEEEEEECCC--------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEE
Confidence 5799999999 98 99999999999999998885 47999999987521 11110 01
Q ss_pred --Ccccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 87 --PFRVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 87 --~~~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
...+++.|++. ++|++++++ +|+.+.+..|.
T Consensus 127 D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 127 DLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecC
Confidence 12356789999 999999996 58777776654
No 199
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.18 E-value=4.7e-11 Score=85.29 Aligned_cols=84 Identities=13% Similarity=0.240 Sum_probs=63.7
Q ss_pred CCCeEEEEEEe-eCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CCCc----
Q 032841 26 KNKANFILFLA-DKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~a-~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~~~---- 88 (132)
.+++++|+||+ + ||++|+...|.|.++.+++. .++.++.|+++... .|... ...|
T Consensus 68 ~Gk~vll~F~a~~--------wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (222)
T 3ztl_A 68 RGKYVVLFFYPAD--------FTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLA 139 (222)
T ss_dssp TTSEEEEEECSCS--------SCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEE
T ss_pred CCCeEEEEEECCC--------CCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEe
Confidence 68999999997 6 99999999999999999885 46999999987522 11110 1111
Q ss_pred ----ccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 89 ----RVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ----~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.+++.|++. ++|++++++ +|+.+.+..+.
T Consensus 140 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~ 179 (222)
T 3ztl_A 140 DRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITIND 179 (222)
T ss_dssp CSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEEC
T ss_pred CCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecC
Confidence 245679998 899999997 58777776654
No 200
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=84.20 Aligned_cols=44 Identities=5% Similarity=-0.101 Sum_probs=39.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~ 77 (132)
.+++++|.|||+ |||+|+...|.+.++.+++. .++.++.|+++.
T Consensus 48 ~Gk~vlv~F~at--------wC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~ 92 (185)
T 2gs3_A 48 RGFVCIVTNVAS--------QGGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 92 (185)
T ss_dssp TTSEEEEEEECS--------SSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred CCCEEEEEEecC--------CCCchHHHHHHHHHHHHHhhcCCeEEEEEECcc
Confidence 679999999998 99999999999999999886 369999998763
No 201
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.17 E-value=2.2e-11 Score=82.96 Aligned_cols=83 Identities=6% Similarity=-0.053 Sum_probs=61.6
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccC-CCC-Cc---------cc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRN-PQH-PF---------RV 90 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~-~~~-~~---------~~ 90 (132)
.|++++|+|| ++ ||++|+...|.+.++.+++ .++.++.|+++... .|.. ... .| .+
T Consensus 42 ~gk~vvl~f~~~~--------~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 112 (165)
T 1q98_A 42 ASKRKVLNIFPSI--------DTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHAL 112 (165)
T ss_dssp TTSEEEEEECSCS--------CSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHH
T ss_pred CCCeEEEEEECCC--------CCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchH
Confidence 5789999999 66 9999999999999999999 68999999987532 1221 111 12 23
Q ss_pred cccccccc---------cceEEEEe-CCeEeEEecCc
Q 032841 91 NSRFKLTG---------VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~---------vPt~~~~~-~g~~~~~~~~~ 117 (132)
++.|++.. .|+.++++ +|+.+.+..|.
T Consensus 113 ~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~ 149 (165)
T 1q98_A 113 HSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVE 149 (165)
T ss_dssp HHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred HHHhCceecccccCCccceeEEEEcCCCEEEEEEeCC
Confidence 34577754 59999997 58888777653
No 202
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.15 E-value=6.2e-11 Score=84.30 Aligned_cols=84 Identities=19% Similarity=0.349 Sum_probs=63.7
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-C-------CCCc----
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-P-------QHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~-------~~~~---- 88 (132)
.+++++|+|| ++ ||++|+...|.+.++.+++. .++.++.|+++... .|.. . ...|
T Consensus 51 ~gk~vvl~F~pa~--------~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 122 (213)
T 2i81_A 51 GKKYVLLYFYPLD--------FTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLS 122 (213)
T ss_dssp TTCEEEEEECSCT--------TSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEE
T ss_pred CCCeEEEEEEcCC--------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEE
Confidence 5789999999 88 99999999999999998885 57999999987521 1111 0 1111
Q ss_pred ----ccccccccc-----ccceEEEEe-CCeEeEEecCc
Q 032841 89 ----RVNSRFKLT-----GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ----~~~~~~~v~-----~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.+++.|++. .+|++++++ +|+.+.+..+.
T Consensus 123 D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~ 161 (213)
T 2i81_A 123 DITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNN 161 (213)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecC
Confidence 245789999 999999987 58777776553
No 203
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.13 E-value=4.8e-11 Score=80.52 Aligned_cols=79 Identities=8% Similarity=0.060 Sum_probs=58.7
Q ss_pred CCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcC---c-----------cCCCCCccc
Q 032841 27 NKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPT---W-----------RNPQHPFRV 90 (132)
Q Consensus 27 ~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~---~-----------~~~~~~~~~ 90 (132)
+++++|+|| ++ |||+|+...|.+.++.+++. .+ .++.|+++.... | .++ ...+
T Consensus 35 ~~~vvl~f~~~~--------~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~--~~~~ 103 (159)
T 2a4v_A 35 NRVVVFFVYPRA--------STPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDP--KREF 103 (159)
T ss_dssp CSEEEEEECSSS--------SSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECT--TCHH
T ss_pred CCeEEEEEcCCC--------CCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECC--ccHH
Confidence 347899987 77 99999999999999998876 35 888888875321 1 011 1124
Q ss_pred cccccccccc-------eEEEEeCCeEeEEecCc
Q 032841 91 NSRFKLTGVP-------TLFRWENDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~vP-------t~~~~~~g~~~~~~~~~ 117 (132)
++.|++...| |+++ .+|+.+.+..|.
T Consensus 104 ~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~ 136 (159)
T 2a4v_A 104 IGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKI 136 (159)
T ss_dssp HHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESC
T ss_pred HHHhCCcccccCCccceEEEE-cCCEEEEEEccC
Confidence 5679999998 6666 889988888775
No 204
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.12 E-value=1.2e-10 Score=81.83 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=62.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChh-HHhhhHHHHHHHHhCC----CCcEEEEEEeCCCc-------Ccc-CCCCCc----
Q 032841 26 KNKANFILFLADKDPSTSLSWCPD-CVRAEPVIYKTLEASP----DDIALLQAYVGDRP-------TWR-NPQHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~-C~~~~p~~~~~~~~~~----~~~~~~~v~~~~~~-------~~~-~~~~~~---- 88 (132)
.|++++|+||++ |||+ |+...|.+.++.+++. +++.++.|+++... .|. .-...|
T Consensus 40 ~Gk~vlv~F~at--------~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~ 111 (200)
T 2b7k_A 40 LGKFSIIYFGFS--------NCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLT 111 (200)
T ss_dssp TTSCEEEEEECT--------TCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEE
T ss_pred CCCEEEEEEECC--------CCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEe
Confidence 589999999998 9997 9999999999766553 47999999987421 010 001111
Q ss_pred -------ccccccccc-ccc---------------eEEEEe-CCeEeEEecCc--chhcHHHHHHhhh
Q 032841 89 -------RVNSRFKLT-GVP---------------TLFRWE-NDIVSGRLEDH--EAHLEHKIKALLS 130 (132)
Q Consensus 89 -------~~~~~~~v~-~vP---------------t~~~~~-~g~~~~~~~~~--~~~~~~~l~~~l~ 130 (132)
.++..|+|. +.| ++++++ +|+.+.++.|. .....+.|+++|+
T Consensus 112 ~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 112 GTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp CCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 234567776 444 666665 68888887764 2234455665554
No 205
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.12 E-value=5.3e-11 Score=83.88 Aligned_cols=83 Identities=6% Similarity=-0.039 Sum_probs=61.0
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccC-CCC-Cc---------cc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRN-PQH-PF---------RV 90 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~-~~~-~~---------~~ 90 (132)
.|++++|.|| ++ ||++|+...|.+.++++++ .++.++.|+.+... .|.. ... .| .+
T Consensus 77 ~Gk~vvl~F~~~~--------~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 147 (200)
T 3zrd_A 77 AGKRKVLNIFPSI--------DTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADF 147 (200)
T ss_dssp TTSEEEEEECSCC--------CCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHH
T ss_pred CCCcEEEEEECCC--------CCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHH
Confidence 6889999999 55 9999999999999999999 68999999987533 1211 111 11 23
Q ss_pred ccccccc---------ccceEEEEe-CCeEeEEecCc
Q 032841 91 NSRFKLT---------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~---------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
++.|++. .+|++++++ +|+.+.+..+.
T Consensus 148 ~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 148 KQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp HHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred HHHhCceeecccCCCccccEEEEECCCCeEEEEEecC
Confidence 4567775 369999997 58777776554
No 206
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.11 E-value=4.4e-11 Score=81.18 Aligned_cols=83 Identities=10% Similarity=0.098 Sum_probs=61.6
Q ss_pred CCCeEEEEEEe-eCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC---cc---CC-C-------CCccc
Q 032841 26 KNKANFILFLA-DKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT---WR---NP-Q-------HPFRV 90 (132)
Q Consensus 26 ~~~~v~v~F~a-~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~---~~---~~-~-------~~~~~ 90 (132)
.|++++|+||+ + ||++|+...|.+.++.+++ .++.++.|+.+.... |. +. . ..-.+
T Consensus 41 ~gk~vvl~F~~~~--------~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 111 (163)
T 1psq_A 41 DGKKKVLSVVPSI--------DTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSF 111 (163)
T ss_dssp TTSEEEEEECSCT--------TSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHH
T ss_pred CCCEEEEEEECCC--------CCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHH
Confidence 57899999996 6 9999999999999999988 789999999875321 10 01 0 11223
Q ss_pred ccccccc----c--cceEEEEe-CCeEeEEecCc
Q 032841 91 NSRFKLT----G--VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~----~--vPt~~~~~-~g~~~~~~~~~ 117 (132)
++.|++. + .|+.++++ +|+.+.+..|.
T Consensus 112 ~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~ 145 (163)
T 1psq_A 112 GRDYALLINEWHLLARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp HHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECS
T ss_pred HHHhCCccccCCceEEEEEEEcCCCeEEEEEecC
Confidence 4568877 4 39999997 58888887764
No 207
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.10 E-value=1.2e-10 Score=80.44 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=59.9
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcC---ccC-CC--------CCcccc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPT---WRN-PQ--------HPFRVN 91 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~---~~~-~~--------~~~~~~ 91 (132)
.|++++|+|| ++ ||++|+...|.|.++.+++. .++.++.|+.+.... |.. .. ..-.++
T Consensus 50 ~Gk~vvl~f~~~~--------~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~ 121 (179)
T 3ixr_A 50 TNQWLVLYFYPKD--------NTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILC 121 (179)
T ss_dssp TTSEEEEEECSCT--------TSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCCEEEEEEcCC--------CCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHH
Confidence 5789999998 77 99999999999999998875 468899998875321 100 00 011245
Q ss_pred ccccccc------------cceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLTG------------VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~------------vPt~~~~~-~g~~~~~~~~~ 117 (132)
+.|++.. +|++++++ +|+.+.++.+.
T Consensus 122 ~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~ 160 (179)
T 3ixr_A 122 KAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQV 160 (179)
T ss_dssp HHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSC
T ss_pred HHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCC
Confidence 6677754 68899997 58777766543
No 208
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.08 E-value=1.8e-11 Score=83.01 Aligned_cols=97 Identities=12% Similarity=0.213 Sum_probs=58.6
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCcC---ccC-CCCCc--------ccc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRPT---WRN-PQHPF--------RVN 91 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~~---~~~-~~~~~--------~~~ 91 (132)
.|++++|.|| |+ |||+|+...|.+.++.+++. .++.++.|+.+.... |.+ ....| +++
T Consensus 29 ~Gk~vvl~f~~~~--------~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~ 100 (157)
T 4g2e_A 29 KGKVVVLAFYPAA--------FTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV 100 (157)
T ss_dssp TTSCEEEEECSCT--------TCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred CCCeEEEEecCCC--------CCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH
Confidence 6889999999 87 99999999999999888875 578899998875331 111 11112 234
Q ss_pred cccccc-----------ccceEEEEe-CCeEeEEecCcc---hhcHHHHHHhhh
Q 032841 92 SRFKLT-----------GVPTLFRWE-NDIVSGRLEDHE---AHLEHKIKALLS 130 (132)
Q Consensus 92 ~~~~v~-----------~vPt~~~~~-~g~~~~~~~~~~---~~~~~~l~~~l~ 130 (132)
+.|||. ..|+.++++ +|+...+..+.. ....+.|.+.|+
T Consensus 101 ~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 101 KKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp HHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred HHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 567763 468888887 577666555432 223345555554
No 209
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.07 E-value=1.4e-10 Score=83.03 Aligned_cols=83 Identities=19% Similarity=0.333 Sum_probs=62.4
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-C-------CCCc----
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-P-------QHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~-------~~~~---- 88 (132)
.+++++|+|| |+ |||+|+...|.|.++.+++. .++.++.|+++... .|.. . ...|
T Consensus 55 ~Gk~vvl~F~pat--------wCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (221)
T 2c0d_A 55 GQKYCCLLFYPLN--------YTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVS 126 (221)
T ss_dssp TTCEEEEEECCCC--------TTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEE
T ss_pred CCCeEEEEEEcCC--------CCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEE
Confidence 5789999999 98 99999999999999988875 57999999987532 1211 0 1122
Q ss_pred ----cccccccc-----cccceEEEEe-CCeEeEEecC
Q 032841 89 ----RVNSRFKL-----TGVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 ----~~~~~~~v-----~~vPt~~~~~-~g~~~~~~~~ 116 (132)
.+++.|++ ..+|++++++ +|+.+.+..+
T Consensus 127 D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g 164 (221)
T 2c0d_A 127 DINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVN 164 (221)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEE
T ss_pred CCchHHHHHcCCcccCCCccceEEEECCCCeEEEEEec
Confidence 23567898 4799999997 5877777655
No 210
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.06 E-value=6.9e-11 Score=80.44 Aligned_cols=81 Identities=7% Similarity=0.030 Sum_probs=59.7
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCcc---------------CCCCCcc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWR---------------NPQHPFR 89 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------~~~~~~~ 89 (132)
.|++++|.|| ++ ||++|+...|.+.+++++ .++.++.|+.+....++ ++ ..-.
T Consensus 45 ~Gk~vvl~f~~~~--------~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~-~~~~ 113 (166)
T 3p7x_A 45 AGKKKLISVVPSI--------DTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDH-RDLS 113 (166)
T ss_dssp TTSCEEEEECSCT--------TSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECT-TTCH
T ss_pred CCCcEEEEEECCC--------CCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCC-chhH
Confidence 5789999999 55 999999999999999877 57999999987533110 11 0113
Q ss_pred ccccccccc------cceEEEEe-CCeEeEEecCc
Q 032841 90 VNSRFKLTG------VPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 90 ~~~~~~v~~------vPt~~~~~-~g~~~~~~~~~ 117 (132)
+++.|++.. +|++++++ +|+.+.+..+.
T Consensus 114 ~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~ 148 (166)
T 3p7x_A 114 FGENYGVVMEELRLLARAVFVLDADNKVVYKEIVS 148 (166)
T ss_dssp HHHHHTCEETTTTEECCEEEEECTTCBEEEEEECS
T ss_pred HHHHhCCccccCCceeeEEEEECCCCeEEEEEEcC
Confidence 456788885 89999997 57777765543
No 211
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.05 E-value=2.8e-10 Score=80.78 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CCCc----
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~~~---- 88 (132)
.|++++|+|| |+ |||+|+...|.|.++.+++. .++.++.|+++... .|... ...|
T Consensus 47 ~Gk~vvl~F~pat--------~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 118 (211)
T 2pn8_A 47 RGKYLVFFFYPLD--------FTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLS 118 (211)
T ss_dssp TTSEEEEEECSCT--------TSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEE
T ss_pred CCCeEEEEEECCC--------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEE
Confidence 5789999999 98 99999999999999988875 47999999987532 12111 1122
Q ss_pred ----ccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 89 ----RVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 ----~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.+++.|++. .+|++++++ +|+.+.+..+.
T Consensus 119 D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~ 158 (211)
T 2pn8_A 119 DLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLND 158 (211)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecC
Confidence 234678884 799999997 57777776553
No 212
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.02 E-value=3.4e-10 Score=77.41 Aligned_cols=42 Identities=21% Similarity=0.398 Sum_probs=35.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
.++++++.|+.. |||+|+.+.|.+.++.++++ ++.++...+.
T Consensus 21 ~a~v~i~~f~d~--------~Cp~C~~~~~~l~~l~~~~~-~v~~~~~~~p 62 (175)
T 3gyk_A 21 EGDVTVVEFFDY--------NCPYCRRAMAEVQGLVDADP-NVRLVYREWP 62 (175)
T ss_dssp TCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred CCCEEEEEEECC--------CCccHHHHHHHHHHHHHhCC-CEEEEEEeCC
Confidence 567888999996 99999999999999999887 4777777753
No 213
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.02 E-value=7.2e-10 Score=75.60 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=60.4
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcC---cc---CC-------C-CCccc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPT---WR---NP-------Q-HPFRV 90 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~---~~---~~-------~-~~~~~ 90 (132)
.+++++|+|| ++ |||+|+...|.+.++.+++ .++.++.|+++.... |. +. + ..-.+
T Consensus 46 ~gk~vvl~f~~~~--------~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 116 (171)
T 2yzh_A 46 KDVVQVIITVPSL--------DTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM 116 (171)
T ss_dssp CSSEEEEEECSCT--------TSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG
T ss_pred CCCeEEEEEECCC--------CCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH
Confidence 5789999999 66 9999999999999999988 789999999875321 10 00 1 11224
Q ss_pred cccccccc---------cceEEEEe-CCeEeEEecC
Q 032841 91 NSRFKLTG---------VPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 91 ~~~~~v~~---------vPt~~~~~-~g~~~~~~~~ 116 (132)
+.|++.. +|+.++++ +|+.+.+..+
T Consensus 117 -~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 151 (171)
T 2yzh_A 117 -EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLV 151 (171)
T ss_dssp -GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred -HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeC
Confidence 5687752 69999998 5887777764
No 214
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.02 E-value=1e-09 Score=78.40 Aligned_cols=43 Identities=14% Similarity=0.130 Sum_probs=38.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~ 77 (132)
.|++++|+|||+ |||+|+ ..|.|+++.+++. .++.++.|++++
T Consensus 55 ~GKvvll~FwAt--------~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~ 98 (215)
T 2i3y_A 55 VGKHILFVNVAT--------YCGLTA-QYPELNALQEELKPYGLVVLGFPCNQ 98 (215)
T ss_dssp TTSEEEEEEECS--------SSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeCC--------CCCChH-hHHHHHHHHHHhccCCeEEEEEEccc
Confidence 689999999998 999999 8999999999886 468999998653
No 215
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.02 E-value=3.9e-10 Score=78.31 Aligned_cols=84 Identities=8% Similarity=0.122 Sum_probs=61.6
Q ss_pred CCCeEEEEEEe-eCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-C----CCCc-------
Q 032841 26 KNKANFILFLA-DKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-P----QHPF------- 88 (132)
Q Consensus 26 ~~~~v~v~F~a-~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~----~~~~------- 88 (132)
.|++++|+||+ + |||+|+...|.|.++.+++. .++.++.|+++... .|.. . ...|
T Consensus 29 ~Gk~vvl~F~~~~--------~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~ 100 (186)
T 1n8j_A 29 EGRWSVFFFYPAD--------FTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPT 100 (186)
T ss_dssp TTSEEEEEECSCT--------TCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTT
T ss_pred CCCeEEEEEECCC--------CCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCc
Confidence 57899999995 6 99999999999999988875 47999999987532 1211 1 1122
Q ss_pred -ccccccccc------ccceEEEEe-CCeEeEEecCc
Q 032841 89 -RVNSRFKLT------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 89 -~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
.+++.|++. .+|+.++++ +|+.+.+..+.
T Consensus 101 ~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~ 137 (186)
T 1n8j_A 101 GALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTA 137 (186)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred hHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecC
Confidence 234678887 479999998 58777776653
No 216
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=99.00 E-value=1.9e-10 Score=69.18 Aligned_cols=73 Identities=12% Similarity=0.202 Sum_probs=49.7
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.+++. ++.+..+|++..++..+ ...++++.++||++ .+|+.
T Consensus 3 v~~f~~~--------~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~------~~~~~g~~~vP~~~--~~g~~ 60 (81)
T 1h75_A 3 ITIYTRN--------DCVQCHATKRAMENR------GFDFEMINVDRVPEAAE------ALRAQGFRQLPVVI--AGDLS 60 (81)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHH------HHHHTTCCSSCEEE--ETTEE
T ss_pred EEEEcCC--------CChhHHHHHHHHHHC------CCCeEEEECCCCHHHHH------HHHHhCCCccCEEE--ECCEE
Confidence 5678886 999999999998873 36677889876542111 11258999999983 36753
Q ss_pred eEEecCcchhcHHHHHHhhhc
Q 032841 111 SGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+.|. ..+.|+++|++
T Consensus 61 ---~~g~---~~~~l~~~l~~ 75 (81)
T 1h75_A 61 ---WSGF---RPDMINRLHPA 75 (81)
T ss_dssp ---EESC---CHHHHGGGSCC
T ss_pred ---EecC---CHHHHHHHHhc
Confidence 3343 35568777753
No 217
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.99 E-value=1.9e-11 Score=83.67 Aligned_cols=84 Identities=12% Similarity=0.266 Sum_probs=59.1
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-CCCCc--------ccc
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-PQHPF--------RVN 91 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-~~~~~--------~~~ 91 (132)
+|++++|.|| |+ |||+|+...|.+.++.+++. .++.++.|+.+... .|.+ ...+| +++
T Consensus 32 ~Gk~vvl~f~~~~--------~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~ 103 (164)
T 4gqc_A 32 RGRPAVLIFFPAA--------FSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVI 103 (164)
T ss_dssp TSSCEEEEECSCT--------TCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH
T ss_pred CCCEEEEEEeCCC--------CCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHH
Confidence 6889999998 87 99999999999999888875 56899999987532 1111 11112 245
Q ss_pred cccccc----------ccceEEEEe-CCeEeEEecCc
Q 032841 92 SRFKLT----------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~----------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
+.|||. ..|+.++++ +|+...+..+.
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~ 140 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTD 140 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECS
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeC
Confidence 678774 468888887 57766665543
No 218
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.98 E-value=9.1e-10 Score=79.16 Aligned_cols=84 Identities=14% Similarity=0.235 Sum_probs=60.7
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHH-hhhHHHHHHHHhCC-CCc-EEEEEEeCCCc---CccC-CCCC-c--------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCV-RAEPVIYKTLEASP-DDI-ALLQAYVGDRP---TWRN-PQHP-F-------- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~-~~~p~~~~~~~~~~-~~~-~~~~v~~~~~~---~~~~-~~~~-~-------- 88 (132)
.|++++|+|| |+ |||+|+ ...|.+.++++++. .++ .++.|+.+... .|.. .... |
T Consensus 32 ~gk~vvl~f~~a~--------~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~ 103 (241)
T 1nm3_A 32 DNKTVIVFSLPGA--------FTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNG 103 (241)
T ss_dssp TTSEEEEEEESCS--------SCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTS
T ss_pred CCCeEEEEEeCCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5789999999 88 999999 99999999988775 478 89999987522 1211 1111 2
Q ss_pred ccccccccc-----------ccceEEEEeCCeEeEEecCc
Q 032841 89 RVNSRFKLT-----------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 89 ~~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~~ 117 (132)
.++..||+. ++|+.+++++|+...+..+.
T Consensus 104 ~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~ 143 (241)
T 1nm3_A 104 EFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEP 143 (241)
T ss_dssp HHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECC
T ss_pred HHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEec
Confidence 234668875 45876666889888777765
No 219
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.98 E-value=1.9e-10 Score=72.59 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=51.1
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.|.++...++ + +..+|++.... .+...-.+...+++.++|+++ .+|+.
T Consensus 14 v~~f~~~--------~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~--~~~~~~~l~~~~g~~~vP~i~--~~g~~ 78 (105)
T 1kte_A 14 VVVFIKP--------TCPFCRKTQELLSQLPFKEG-L--LEFVDITATSD--TNEIQDYLQQLTGARTVPRVF--IGKEC 78 (105)
T ss_dssp EEEEECS--------SCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTT--HHHHHHHHHHHHSCCCSCEEE--ETTEE
T ss_pred EEEEEcC--------CCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCC--HHHHHHHHHHHhCCCCcCeEE--ECCEE
Confidence 5668886 99999999999998755443 2 55667765420 000000144578999999973 37765
Q ss_pred eEEecCc-chhcHHHHHHhhh
Q 032841 111 SGRLEDH-EAHLEHKIKALLS 130 (132)
Q Consensus 111 ~~~~~~~-~~~~~~~l~~~l~ 130 (132)
++...+. .......|+++|+
T Consensus 79 i~g~~~~~~~~~~g~L~~~l~ 99 (105)
T 1kte_A 79 IGGCTDLESMHKRGELLTRLQ 99 (105)
T ss_dssp EESHHHHHHHHHHTHHHHHHH
T ss_pred EeccHHHHHHHHCCcHHHHHH
Confidence 5433221 1223445666654
No 220
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.98 E-value=5.4e-10 Score=75.87 Aligned_cols=84 Identities=12% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHH-hhhHHHHHHHHhCC-CCcE-EEEEEeCCCc---CccC-CCC--Ccc------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCV-RAEPVIYKTLEASP-DDIA-LLQAYVGDRP---TWRN-PQH--PFR------ 89 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~-~~~p~~~~~~~~~~-~~~~-~~~v~~~~~~---~~~~-~~~--~~~------ 89 (132)
.|++++|.|| ++ |||+|+ ...|.+.++++++. .++. ++.|+.+... .|.. ... .|.
T Consensus 34 ~gk~vvl~f~~~~--------~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (162)
T 1tp9_A 34 AGKKVILFGVPGA--------FTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGS 105 (162)
T ss_dssp TTSEEEEEEESCT--------TCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTT
T ss_pred CCCcEEEEEeCCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCC
Confidence 5789999999 77 999999 89999999988775 5788 9999987522 1211 111 232
Q ss_pred --cccccccc-----------ccceEEEEeCCeEeEEecCc
Q 032841 90 --VNSRFKLT-----------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 90 --~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~~ 117 (132)
+++.||+. .+|+.+++++|+...+..+.
T Consensus 106 ~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 106 ATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp SHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred chHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 34568876 38998888888887776665
No 221
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.97 E-value=4e-10 Score=80.17 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=32.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEe
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYV 75 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~ 75 (132)
.++++++.||+. |||+|+++.|.++++.+. ++.++.+..
T Consensus 85 ~~k~~vv~F~d~--------~Cp~C~~~~~~l~~l~~~---~v~v~~~~~ 123 (216)
T 1eej_A 85 QEKHVITVFTDI--------TCGYCHKLHEQMADYNAL---GITVRYLAF 123 (216)
T ss_dssp TCCEEEEEEECT--------TCHHHHHHHTTHHHHHHT---TEEEEEEEC
T ss_pred CCCEEEEEEECC--------CCHHHHHHHHHHHHHHhC---CcEEEEEEC
Confidence 578899999997 999999999999998753 577776665
No 222
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.97 E-value=2.2e-09 Score=73.60 Aligned_cols=84 Identities=11% Similarity=0.121 Sum_probs=59.7
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHh-hhHHHHHHHHhCC-CCc-EEEEEEeCCCc---CccC-CCCC--c-------
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVR-AEPVIYKTLEASP-DDI-ALLQAYVGDRP---TWRN-PQHP--F------- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~-~~p~~~~~~~~~~-~~~-~~~~v~~~~~~---~~~~-~~~~--~------- 88 (132)
.+++++|.|| |+ |||+|+. ..|.+.++++++. .++ .++.|+.+... .|.. ...+ |
T Consensus 30 ~Gk~vvl~f~~a~--------wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~ 101 (167)
T 2wfc_A 30 AGKKGVLFAVPGA--------FTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPG 101 (167)
T ss_dssp TTSEEEEEEESCT--------TCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTT
T ss_pred CCCcEEEEEeCCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCC
Confidence 5778888886 87 9999999 9999999888775 478 99999987532 1211 1111 3
Q ss_pred -ccccccccccc-----------ceEEEEeCCeEeEEecCc
Q 032841 89 -RVNSRFKLTGV-----------PTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 89 -~~~~~~~v~~v-----------Pt~~~~~~g~~~~~~~~~ 117 (132)
++++.|++... |+.+++++|+...+..+.
T Consensus 102 ~~~~~~~gv~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 102 GAFTKAVDMELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp SHHHHHTTCEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CcHHHHcCCccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 23467888754 877666889887776654
No 223
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.95 E-value=8.8e-10 Score=79.79 Aligned_cols=84 Identities=8% Similarity=0.142 Sum_probs=62.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CCCc-----
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QHPF----- 88 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~~~----- 88 (132)
.|++++|+||++ .|||+|+...|.|.++.+++. .++.++.|+++... .|... ...|
T Consensus 76 ~Gk~vvL~F~~~-------~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D 148 (240)
T 3qpm_A 76 RGKYLVFFFYPL-------DFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSD 148 (240)
T ss_dssp TTSEEEEEECSC-------TTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEEC
T ss_pred CCCEEEEEEECC-------CCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeC
Confidence 678999999993 399999999999999998885 47899999987532 22110 1222
Q ss_pred ---ccccccccc------ccceEEEEe-CCeEeEEecC
Q 032841 89 ---RVNSRFKLT------GVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 ---~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~ 116 (132)
.+++.|++. .+|++++++ +|+.+.+..+
T Consensus 149 ~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~ 186 (240)
T 3qpm_A 149 LTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMN 186 (240)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred chHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEec
Confidence 245678987 789999997 5777666554
No 224
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.95 E-value=4.8e-09 Score=72.94 Aligned_cols=43 Identities=28% Similarity=0.555 Sum_probs=39.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
.++++++.|++. |||+|+.+.|.+.++.+++++++.|..+++.
T Consensus 24 ~~~~~vv~f~d~--------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAY--------TCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECT--------TCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECC--------CCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 578899999997 9999999999999999999878999999986
No 225
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.93 E-value=2.3e-09 Score=76.00 Aligned_cols=42 Identities=10% Similarity=-0.061 Sum_probs=37.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~ 76 (132)
.|++++|+|||+ |||+| ...|.|+++.+++. .++.++.|+++
T Consensus 37 kGKvvll~F~At--------~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVAS--------YGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECS--------SSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCC--------CCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 689999999998 99999 68899999999886 46899999865
No 226
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.93 E-value=1.1e-09 Score=64.57 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=49.5
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.+++. ++.+..+|++..+...+ ..+.+++.++|++++ +|+.
T Consensus 3 i~~y~~~--------~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~------~~~~~~~~~vP~l~~--~g~~ 60 (75)
T 1r7h_A 3 ITLYTKP--------ACVQCTATKKALDRA------GLAYNTVDISLDDEARD------YVMALGYVQAPVVEV--DGEH 60 (75)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHH------HHHHTTCBCCCEEEE--TTEE
T ss_pred EEEEeCC--------CChHHHHHHHHHHHc------CCCcEEEECCCCHHHHH------HHHHcCCCccCEEEE--CCeE
Confidence 4667776 999999999998874 36677788876441100 112689999999974 6643
Q ss_pred eEEecCcchhcHHHHHHhhhc
Q 032841 111 SGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+.|. ..+.|+++|++
T Consensus 61 ---~~g~---~~~~l~~~l~~ 75 (75)
T 1r7h_A 61 ---WSGF---RPERIKQLQAA 75 (75)
T ss_dssp ---EESC---CHHHHHHHHC-
T ss_pred ---EcCC---CHHHHHHHHhC
Confidence 4443 35678888753
No 227
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.92 E-value=1.4e-10 Score=74.72 Aligned_cols=85 Identities=15% Similarity=0.107 Sum_probs=50.7
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.|.+....++ . +..+|++..+. .....-.+...+++.++|++++ +|+.
T Consensus 21 vv~f~~~--------~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~--~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 21 VTIFVKY--------TCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKP--ENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp EEEEECT--------TCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSS--HHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEeC--------CChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCC--hHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 6678886 99999999999877532221 2 77788876430 0000001556789999998744 7766
Q ss_pred eEEecCcc-hhcHHHHHHhhh
Q 032841 111 SGRLEDHE-AHLEHKIKALLS 130 (132)
Q Consensus 111 ~~~~~~~~-~~~~~~l~~~l~ 130 (132)
++.+.+.. ......|+++|+
T Consensus 86 igg~~~~~~~~~~~~L~~~L~ 106 (114)
T 2hze_A 86 IGGYSDLLEIDNMDALGDILS 106 (114)
T ss_dssp EESHHHHHHHHHTTCHHHHHH
T ss_pred EeCcHHHHHHHHCChHHHHHH
Confidence 55332211 122334666654
No 228
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.91 E-value=1.5e-09 Score=74.31 Aligned_cols=96 Identities=8% Similarity=0.068 Sum_probs=63.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCCh-hHHhhhHHHHHHHHhCC---CCcEEEEEEeCCCc----------CccCCCCC----
Q 032841 26 KNKANFILFLADKDPSTSLSWCP-DCVRAEPVIYKTLEASP---DDIALLQAYVGDRP----------TWRNPQHP---- 87 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~-~C~~~~p~~~~~~~~~~---~~~~~~~v~~~~~~----------~~~~~~~~---- 87 (132)
.|++++|+||++ ||| .|....|.+.++.+++. .++.++.|+++... ........
T Consensus 27 ~Gk~vll~F~~t--------~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l 98 (170)
T 3me7_A 27 KGKPIILSPIYT--------HCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVV 98 (170)
T ss_dssp TTSCEEEEEECT--------TCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEE
T ss_pred CCCEEEEEEECC--------CCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 589999999998 997 69999999999988874 46899999987311 00000000
Q ss_pred --------cccccc---------ccccccceEEEEe-CCeEeEEecCcchhcHHHHHHhhh
Q 032841 88 --------FRVNSR---------FKLTGVPTLFRWE-NDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 88 --------~~~~~~---------~~v~~vPt~~~~~-~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.++++. +++...|++++++ +|+.+.++.|.... .+.|.+.|+
T Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~-~~~i~~~l~ 158 (170)
T 3me7_A 99 KAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYN-YLEFVNALR 158 (170)
T ss_dssp EESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCC-HHHHHHHHH
T ss_pred eCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCC-HHHHHHHHH
Confidence 012233 3456778888887 58777777776433 444444443
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.89 E-value=3.4e-09 Score=73.57 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=37.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
+++++++.|+.. |||+|+.+.|.+.++.+++++++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~--------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWY--------GCPHCYAFEPTIVPWSEKLPADVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCEEEEEECC--------CChhHHHhhHHHHHHHHhCCCCeEEEEEehh
Confidence 567899999996 9999999999999999999878888777663
No 230
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.88 E-value=1.5e-09 Score=77.10 Aligned_cols=88 Identities=13% Similarity=0.237 Sum_probs=58.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC---c--------Ccc--CC--------
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR---P--------TWR--NP-------- 84 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~---~--------~~~--~~-------- 84 (132)
.++++++.|+.. |||+|+++.|.++++.+. ++.+..+...-. + -|. ++
T Consensus 85 ~~k~~vv~F~d~--------~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~ 153 (211)
T 1t3b_A 85 NEKHVVTVFMDI--------TCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAE 153 (211)
T ss_dssp TCSEEEEEEECT--------TCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHH
T ss_pred CCCEEEEEEECC--------CCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHH
Confidence 567889999996 999999999999997653 466666654311 0 000 00
Q ss_pred ----------C----CCccccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 85 ----------Q----HPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 85 ----------~----~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
. ....++.++||+|+||+++ .+|+ ++.|. ...+.|+++|+
T Consensus 154 ~~~~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~--~~~~~l~~~l~ 207 (211)
T 1t3b_A 154 KGNLPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGY--LKPADLLRALE 207 (211)
T ss_dssp TTCCCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSC--CCHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCC--CCHHHHHHHHH
Confidence 0 0122457899999999988 6774 45554 23556777765
No 231
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.86 E-value=3.1e-09 Score=74.12 Aligned_cols=84 Identities=13% Similarity=0.158 Sum_probs=57.2
Q ss_pred CCCeEE-EEEEeeCCCCCCCCCChhHHh-hhHHHHHHHHhCC-CCcE-EEEEEeCCCc---CccC-CCCC--c-------
Q 032841 26 KNKANF-ILFLADKDPSTSLSWCPDCVR-AEPVIYKTLEASP-DDIA-LLQAYVGDRP---TWRN-PQHP--F------- 88 (132)
Q Consensus 26 ~~~~v~-v~F~a~~~~~~~~pWC~~C~~-~~p~~~~~~~~~~-~~~~-~~~v~~~~~~---~~~~-~~~~--~------- 88 (132)
.+++++ +.|||+ |||+|+. ..|.+.++++++. .++. ++.|+.++.. .|.. ...+ |
T Consensus 55 ~Gk~vvL~f~~a~--------wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~ 126 (184)
T 3uma_A 55 KGKRVVLFAVPGA--------FTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWN 126 (184)
T ss_dssp TTSEEEEEEESCT--------TCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTT
T ss_pred CCCCEEEEEEcCC--------CCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCc
Confidence 466554 456687 9999999 7999999988875 4677 9999987632 1211 0111 2
Q ss_pred -ccccccccc-----------ccceEEEEeCCeEeEEecCc
Q 032841 89 -RVNSRFKLT-----------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 89 -~~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~~ 117 (132)
++++.||+. ..|+.+++++|++.....+.
T Consensus 127 ~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~ 167 (184)
T 3uma_A 127 AAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEE 167 (184)
T ss_dssp CHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECS
T ss_pred hHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeC
Confidence 244667775 35767777999888877765
No 232
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.85 E-value=6.4e-09 Score=75.20 Aligned_cols=93 Identities=12% Similarity=0.230 Sum_probs=61.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc------------------Ccc-----
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP------------------TWR----- 82 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~------------------~~~----- 82 (132)
.++.+++.|+.. |||+|+++.|.+.++.+. +++.+..+.+.-.. .|.
T Consensus 96 ~ak~~v~~F~D~--------~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 96 DAPVIVYVFADP--------FCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp TCSEEEEEEECT--------TCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred CCCeEEEEEECC--------CChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 456778888886 999999999999998765 36888877763210 000
Q ss_pred ------CCC------------CCccccccccccccceEEEEeC-CeEeEEecCcchhcHHHHHHhhhc
Q 032841 83 ------NPQ------------HPFRVNSRFKLTGVPTLFRWEN-DIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 83 ------~~~------------~~~~~~~~~~v~~vPt~~~~~~-g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++. ...+++.++||.|+||+++.++ |+ ..++.|.. ..+.|.++|+.
T Consensus 166 ~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~--~~~~L~~~l~~ 230 (241)
T 1v58_A 166 GGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLP--DQKTLNIIMGN 230 (241)
T ss_dssp TTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSC--CHHHHHHHTTC
T ss_pred hccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCC--CHHHHHHHHHH
Confidence 000 0112456899999999999874 64 35667753 34567776653
No 233
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=2.2e-09 Score=70.80 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=41.9
Q ss_pred EEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEe
Q 032841 32 ILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVS 111 (132)
Q Consensus 32 v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~ 111 (132)
+.|+++ |||+|+++.+.|.++. +.+..+|++.... .+...-.+...+++.++|+++ .+|+.+
T Consensus 30 vvf~~~--------~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~--~~~~~~~l~~~~g~~~vP~l~--i~G~~i 91 (130)
T 2cq9_A 30 VIFSKT--------SCSYCTMAKKLFHDMN------VNYKVVELDLLEY--GNQFQDALYKMTGERTVPRIF--VNGTFI 91 (130)
T ss_dssp EEEECS--------SCSHHHHHHHHHHHHT------CCCEEEETTTSTT--HHHHHHHHHHHHSSCCSSEEE--ETTEEE
T ss_pred EEEEcC--------CChHHHHHHHHHHHcC------CCcEEEECcCCcC--cHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 348886 9999999999999863 3455677765410 000000144578999999984 377665
Q ss_pred EE
Q 032841 112 GR 113 (132)
Q Consensus 112 ~~ 113 (132)
+.
T Consensus 92 gg 93 (130)
T 2cq9_A 92 GG 93 (130)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 234
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.81 E-value=1.2e-09 Score=69.31 Aligned_cols=55 Identities=11% Similarity=0.129 Sum_probs=38.3
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEeE
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSG 112 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~ 112 (132)
||||+|+++.+.|.+. ++.+..+|++..+...+ .+...+++.++|+++ .+|+.++
T Consensus 30 ~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~-----~l~~~~g~~~vP~v~--i~g~~ig 84 (105)
T 2yan_A 30 AKCGFSKQILEILNST------GVEYETFDILEDEEVRQ-----GLKAYSNWPTYPQLY--VKGELVG 84 (105)
T ss_dssp BCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHH-----HHHHHHTCCSSCEEE--ETTEEEE
T ss_pred CCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHH-----HHHHHHCCCCCCeEE--ECCEEEe
Confidence 4999999999999886 35677888876441111 023457889999984 4776554
No 235
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.80 E-value=3.3e-09 Score=77.46 Aligned_cols=83 Identities=14% Similarity=0.205 Sum_probs=61.7
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccCC--------CCCc----
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRNP--------QHPF---- 88 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~~--------~~~~---- 88 (132)
.|++++|+|| ++ ||++|....|.|.++.+++. .++.++.|+++... .|... ...|
T Consensus 90 kGK~vvL~F~~a~--------~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 161 (254)
T 3tjj_A 90 RGKYLVFFFYPLD--------FTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLS 161 (254)
T ss_dssp TTSEEEEEECSCT--------TCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEE
T ss_pred CCCeEEEEEECCC--------CCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceee
Confidence 6789999999 76 99999999999999998875 47899999987632 23211 1222
Q ss_pred ----ccccccccc------ccceEEEEe-CCeEeEEecC
Q 032841 89 ----RVNSRFKLT------GVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 ----~~~~~~~v~------~vPt~~~~~-~g~~~~~~~~ 116 (132)
.+++.|++. .+|++++++ +|+...+..+
T Consensus 162 D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 162 DLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp CTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred CcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEec
Confidence 245678885 689999997 5777666554
No 236
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.77 E-value=8e-09 Score=75.36 Aligned_cols=84 Identities=19% Similarity=0.221 Sum_probs=60.2
Q ss_pred CCCe-EEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-------CCCC------
Q 032841 26 KNKA-NFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-------PQHP------ 87 (132)
Q Consensus 26 ~~~~-v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-------~~~~------ 87 (132)
.|+. ++++|||+ ||++|....|.+.++++++. .++.++.|++|... .|.. ..-.
T Consensus 32 ~GK~vVL~~fpa~--------~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D 103 (249)
T 3a2v_A 32 QGKWFVLFSHPAD--------FTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIAD 103 (249)
T ss_dssp TTCEEEEECCSCT--------TCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEEC
T ss_pred CCCEEEEEEEcCC--------CCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEEC
Confidence 4665 55678998 99999999999999988875 47999999997532 1211 0111
Q ss_pred --cccccccccc-------ccceEEEEe-CCeEeEEecCc
Q 032841 88 --FRVNSRFKLT-------GVPTLFRWE-NDIVSGRLEDH 117 (132)
Q Consensus 88 --~~~~~~~~v~-------~vPt~~~~~-~g~~~~~~~~~ 117 (132)
-.++..|++. ++|++++++ +|+...+..+.
T Consensus 104 ~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~ 143 (249)
T 3a2v_A 104 PQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYP 143 (249)
T ss_dssp TTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEEC
T ss_pred CchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecC
Confidence 1245678887 999999997 57777666554
No 237
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.77 E-value=3.2e-09 Score=71.56 Aligned_cols=60 Identities=15% Similarity=0.240 Sum_probs=40.8
Q ss_pred EEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC---cCccCCCCCccccccccccccceEEEEeCC
Q 032841 32 ILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR---PTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 32 v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
+.|+++ |||+|+++.+.|.++. +.+..+|++.. ++++. .+...+++.++|+++ .+|
T Consensus 52 vvf~~~--------~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~-----~L~~~~g~~tvP~if--i~G 110 (146)
T 2ht9_A 52 VIFSKT--------SCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQD-----ALYKMTGERTVPRIF--VNG 110 (146)
T ss_dssp EEEECT--------TCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHH-----HHHHHHSCCCSCEEE--ETT
T ss_pred EEEECC--------CChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHH-----HHHHHhCCCCcCeEE--ECC
Confidence 348886 9999999999999873 34556676554 11110 144678999999984 377
Q ss_pred eEeE
Q 032841 109 IVSG 112 (132)
Q Consensus 109 ~~~~ 112 (132)
+.++
T Consensus 111 ~~ig 114 (146)
T 2ht9_A 111 TFIG 114 (146)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 238
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.75 E-value=8.6e-09 Score=71.17 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=56.7
Q ss_pred CCCeEEEEE-EeeCCCCCCCCCChhHH-hhhHHHHHHHHhCC-CCcEEEE-EEeCCCc---CccC-CCCC--c-------
Q 032841 26 KNKANFILF-LADKDPSTSLSWCPDCV-RAEPVIYKTLEASP-DDIALLQ-AYVGDRP---TWRN-PQHP--F------- 88 (132)
Q Consensus 26 ~~~~v~v~F-~a~~~~~~~~pWC~~C~-~~~p~~~~~~~~~~-~~~~~~~-v~~~~~~---~~~~-~~~~--~------- 88 (132)
.+++++|.| ||+ |||+|+ ...|.|.++++++. .++.++. |+.+... .|.. ...+ |
T Consensus 42 ~gk~vvL~f~pa~--------wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~ 113 (173)
T 3mng_A 42 KGKKGVLFGVPGA--------FTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPT 113 (173)
T ss_dssp TTSEEEEEECSCT--------TCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTT
T ss_pred CCCcEEEEEEeCC--------CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCC
Confidence 467666655 588 999999 58999999988774 4677775 8876522 2211 1111 3
Q ss_pred -ccccccccc-------------ccceEEEEeCCeEeEEecCc
Q 032841 89 -RVNSRFKLT-------------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 89 -~~~~~~~v~-------------~vPt~~~~~~g~~~~~~~~~ 117 (132)
++++.||+. ..|+.+++++|.......+.
T Consensus 114 ~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~ 156 (173)
T 3mng_A 114 GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEP 156 (173)
T ss_dssp CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECT
T ss_pred hHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeC
Confidence 234667775 45999999988877776664
No 239
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.74 E-value=1.1e-07 Score=64.98 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=35.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCCh-hHHhhhHHHHHHHHhC---CCCcEEEEEEeCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCP-DCVRAEPVIYKTLEAS---PDDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~-~C~~~~p~~~~~~~~~---~~~~~~~~v~~~~ 77 (132)
.||+++|+||++ ||| +|....+.+.++.+.+ +.++.++.|++|.
T Consensus 31 ~Gk~vll~F~~t--------~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp 78 (170)
T 4hde_A 31 KGKVWVADFMFT--------NCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP 78 (170)
T ss_dssp TTSCEEEEEECT--------TCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCEEEEEEECC--------CCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc
Confidence 689999999998 997 6988888888776554 3568899998863
No 240
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.72 E-value=1.4e-08 Score=73.21 Aligned_cols=82 Identities=7% Similarity=0.147 Sum_probs=59.3
Q ss_pred CC-eEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-------C--CCCc---
Q 032841 27 NK-ANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-------P--QHPF--- 88 (132)
Q Consensus 27 ~~-~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-------~--~~~~--- 88 (132)
++ .++|+|| |+ |||.|....|.+.++.+++. .++.++.|+++... .|.. . ...|
T Consensus 28 Gk~~vvL~f~pa~--------~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil 99 (233)
T 2v2g_A 28 GNSWGVLFSHPRD--------FTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPII 99 (233)
T ss_dssp CSSEEEEEECSCS--------SCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEE
T ss_pred CCCeEEEEEECCC--------CCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEE
Confidence 44 8899998 87 99999999999999988775 57999999987632 2321 1 1222
Q ss_pred -----ccccccccc------------ccceEEEEe-CCeEeEEecC
Q 032841 89 -----RVNSRFKLT------------GVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 -----~~~~~~~v~------------~vPt~~~~~-~g~~~~~~~~ 116 (132)
.+++.|++. ++|++++++ +|+...++.+
T Consensus 100 ~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~ 145 (233)
T 2v2g_A 100 ADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILY 145 (233)
T ss_dssp ECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEE
T ss_pred ECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEec
Confidence 235668874 689999997 4776666644
No 241
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.71 E-value=8.5e-09 Score=70.76 Aligned_cols=84 Identities=12% Similarity=0.141 Sum_probs=55.8
Q ss_pred CC-CeEEEEEEeeCCCCCCCCCChhHHhh-hHHHHHHHHhCC-CCcE-EEEEEeCCCc---CccC-CC--CCcc------
Q 032841 26 KN-KANFILFLADKDPSTSLSWCPDCVRA-EPVIYKTLEASP-DDIA-LLQAYVGDRP---TWRN-PQ--HPFR------ 89 (132)
Q Consensus 26 ~~-~~v~v~F~a~~~~~~~~pWC~~C~~~-~p~~~~~~~~~~-~~~~-~~~v~~~~~~---~~~~-~~--~~~~------ 89 (132)
.+ +.+++.|||+ |||+|+.. .|.|.++++++. .++. ++.|+.+... .|.. .. ..|.
T Consensus 42 ~gk~vvl~~~~a~--------wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~ 113 (171)
T 2pwj_A 42 KDKKVVIFGLPGA--------YTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEFYGDFD 113 (171)
T ss_dssp TTSEEEEEECSCT--------TCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTT
T ss_pred CCCCEEEEEecCC--------CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEEEECCc
Confidence 35 4677788998 99999998 999999888774 4688 9999987522 1211 01 1232
Q ss_pred --ccccccccc-----------cceEEEEeCCeEeEEecCc
Q 032841 90 --VNSRFKLTG-----------VPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 90 --~~~~~~v~~-----------vPt~~~~~~g~~~~~~~~~ 117 (132)
+++.||+.. .|+.+++++|+......+.
T Consensus 114 ~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 114 GSFHKSLELTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp CHHHHHHTCEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred cHHHHHhCCccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 345677652 4444455588887777765
No 242
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.70 E-value=6.2e-08 Score=69.08 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=57.4
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccccccccc--ccceEEEEeCCeE-eEEecCcchhc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLT--GVPTLFRWENDIV-SGRLEDHEAHL 121 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~--~vPt~~~~~~g~~-~~~~~~~~~~~ 121 (132)
+||++|....+.++++++++.+++.|+.+|.+... +.. .+..||+. .+|++++++.+.. ...+. .+...
T Consensus 141 ~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~-~~~------~l~~fgl~~~~~P~~~i~~~~~~~ky~~~-~~~~t 212 (227)
T 4f9z_D 141 KASPEYEENMHRYQKAAKLFQGKILFILVDSGMKE-NGK------VISFFKLKESQLPALAIYQTLDDEWDTLP-TAEVS 212 (227)
T ss_dssp TTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGG-GHH------HHHHTTCCGGGCSEEEEEESSSCCEEEET-TCCCC
T ss_pred CCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHh-HHH------HHHHcCCCcccCCEEEEEECCCCccccCC-cCCCC
Confidence 49999999999999999999888999999986422 111 45679998 8999999985332 22232 23356
Q ss_pred HHHHHHhhh
Q 032841 122 EHKIKALLS 130 (132)
Q Consensus 122 ~~~l~~~l~ 130 (132)
.+.|++|++
T Consensus 213 ~~~i~~Fv~ 221 (227)
T 4f9z_D 213 VEHVQNFCD 221 (227)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777888876
No 243
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.67 E-value=5.6e-09 Score=67.73 Aligned_cols=85 Identities=18% Similarity=0.212 Sum_probs=50.0
Q ss_pred EEEEEeeCCCCCCCCCChhHHhh-hHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRA-EPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~-~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
++.|+++ |||+|+++ .+.|.+... ..+.+..+|++..+. .+...-.+...+++.++|++ |.+|+
T Consensus 27 Vvvf~~~--------~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~--~~~~~~~l~~~~g~~tvP~v--fi~g~ 91 (118)
T 3c1r_A 27 IFVASKT--------YCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKE--GADIQAALYEINGQRTVPNI--YINGK 91 (118)
T ss_dssp EEEEECS--------SCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTT--HHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEEEEcC--------CCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCC--hHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 4568886 99999999 887766431 237788889876431 00000014557899999987 44776
Q ss_pred EeEEecCc-chhcHHHHHHhhh
Q 032841 110 VSGRLEDH-EAHLEHKIKALLS 130 (132)
Q Consensus 110 ~~~~~~~~-~~~~~~~l~~~l~ 130 (132)
.++.+... .......|+++|+
T Consensus 92 ~igG~d~l~~l~~~g~L~~~L~ 113 (118)
T 3c1r_A 92 HIGGNDDLQELRETGELEELLE 113 (118)
T ss_dssp EEESHHHHHHHHHHTHHHHHHH
T ss_pred EEEcHHHHHHHHHCCcHHHHHH
Confidence 55422211 1222334555554
No 244
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.65 E-value=2.6e-09 Score=65.50 Aligned_cols=57 Identities=21% Similarity=0.355 Sum_probs=39.8
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccc-cccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF-KLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~v~~vPt~~~~~~g~ 109 (132)
++.|+++ |||+|+++.+.+++. ++.+..+|++ ...... +.+.+ ++.++|++++ +|+
T Consensus 8 v~~y~~~--------~C~~C~~~~~~L~~~------~i~~~~vdv~-~~~~~~------l~~~~~~~~~vP~l~~--~g~ 64 (89)
T 2klx_A 8 IILYTRP--------NCPYCKRARDLLDKK------GVKYTDIDAS-TSLRQE------MVQRANGRNTFPQIFI--GDY 64 (89)
T ss_dssp EEEESCS--------CCTTTHHHHHHHHHH------TCCEEEECSC-HHHHHH------HHHHHHSSCCSCEEEE--TTE
T ss_pred EEEEECC--------CChhHHHHHHHHHHc------CCCcEEEECC-HHHHHH------HHHHhCCCCCcCEEEE--CCE
Confidence 5677776 999999999999876 2556777776 110001 44567 8999999853 775
Q ss_pred E
Q 032841 110 V 110 (132)
Q Consensus 110 ~ 110 (132)
.
T Consensus 65 ~ 65 (89)
T 2klx_A 65 H 65 (89)
T ss_dssp E
T ss_pred E
Confidence 4
No 245
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.63 E-value=1.8e-08 Score=64.49 Aligned_cols=97 Identities=13% Similarity=0.270 Sum_probs=53.7
Q ss_pred chHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccc
Q 032841 12 SFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVN 91 (132)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 91 (132)
..++.++.+++ .++ ++.|+++ |||+|+++.+.|.+. ++.+..+|++....- ++...-.+.
T Consensus 7 ~~~~~~~~~i~---~~~--v~vy~~~--------~Cp~C~~~~~~L~~~------~i~~~~~di~~~~~~-~~~~~~~l~ 66 (113)
T 3rhb_A 7 RMEESIRKTVT---ENT--VVIYSKT--------WCSYCTEVKTLFKRL------GVQPLVVELDQLGPQ-GPQLQKVLE 66 (113)
T ss_dssp HHHHHHHHHHH---HSS--EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEEGGGSTTH-HHHHHHHHH
T ss_pred HHHHHHHHHHh---cCC--EEEEECC--------CChhHHHHHHHHHHc------CCCCeEEEeecCCCC-hHHHHHHHH
Confidence 34555555554 344 5668886 999999999999875 234456676542100 000000022
Q ss_pred ccccccccceEEEEeCCeEeEEecCc-chhcHHHHHHhhh
Q 032841 92 SRFKLTGVPTLFRWENDIVSGRLEDH-EAHLEHKIKALLS 130 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~~g~~~~~~~~~-~~~~~~~l~~~l~ 130 (132)
..+++.++|++ |.+|+.++-+... .......|.++|+
T Consensus 67 ~~~g~~tvP~i--fi~g~~igG~~~~~~~~~~g~L~~~l~ 104 (113)
T 3rhb_A 67 RLTGQHTVPNV--FVCGKHIGGCTDTVKLNRKGDLELMLA 104 (113)
T ss_dssp HHHSCCSSCEE--EETTEEEESHHHHHHHHHHTHHHHHHT
T ss_pred HHhCCCCcCEE--EECCEEEcCcHHHHHHHHcCCHHHHHH
Confidence 34688999998 3477654422221 2233445666654
No 246
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.62 E-value=5.8e-08 Score=69.49 Aligned_cols=80 Identities=11% Similarity=0.207 Sum_probs=56.4
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC-----------CCCCc-----
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN-----------PQHPF----- 88 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~-----------~~~~~----- 88 (132)
.+++.|||+ |||+|....|.+.++.+++. .++.++.|+++... .|.. ....|
T Consensus 34 vvL~~~~a~--------~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D 105 (224)
T 1prx_A 34 GILFSHPRD--------FTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDD 105 (224)
T ss_dssp EEEEEESCS--------SCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEEC
T ss_pred EEEEEECCC--------CCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeec
Confidence 556666898 99999999999999998875 47999999987632 1211 11122
Q ss_pred ---ccccccccc------------ccceEEEEe-CCeEeEEecC
Q 032841 89 ---RVNSRFKLT------------GVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 ---~~~~~~~v~------------~vPt~~~~~-~g~~~~~~~~ 116 (132)
.+++.|++. .+|++++++ +|+...++.+
T Consensus 106 ~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~ 149 (224)
T 1prx_A 106 RNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILY 149 (224)
T ss_dssp TTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEEC
T ss_pred CchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEec
Confidence 234567763 489999997 4777666654
No 247
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.60 E-value=1.6e-08 Score=63.69 Aligned_cols=63 Identities=19% Similarity=0.378 Sum_probs=42.0
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccc-cccccceEEEEeC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF-KLTGVPTLFRWEN 107 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~v~~vPt~~~~~~ 107 (132)
.-++.|+++ |||+|+++.+.|.+. ++.+..+|++..++... .+.... +..++|+++ .+
T Consensus 16 ~~v~vy~~~--------~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~-----~l~~~~~g~~~vP~if--i~ 74 (99)
T 3qmx_A 16 AKIEIYTWS--------TCPFCMRALALLKRK------GVEFQEYCIDGDNEARE-----AMAARANGKRSLPQIF--ID 74 (99)
T ss_dssp CCEEEEECT--------TCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHH-----HHHHHTTTCCCSCEEE--ET
T ss_pred CCEEEEEcC--------CChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHH-----HHHHHhCCCCCCCEEE--EC
Confidence 345677776 999999999999986 35567788877542111 022234 889999873 47
Q ss_pred CeEeE
Q 032841 108 DIVSG 112 (132)
Q Consensus 108 g~~~~ 112 (132)
|+.++
T Consensus 75 g~~ig 79 (99)
T 3qmx_A 75 DQHIG 79 (99)
T ss_dssp TEEEE
T ss_pred CEEEe
Confidence 75443
No 248
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.58 E-value=2.5e-08 Score=70.20 Aligned_cols=45 Identities=18% Similarity=0.388 Sum_probs=40.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGDR 78 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~~ 78 (132)
++++++|.||+. |||+|+.+.|.+ +++.+++++++.|..++++..
T Consensus 112 ~~~~~vveFf~~--------~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSF--------FCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECT--------TCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECC--------CChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 357899999997 999999999998 999999988899999998753
No 249
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.56 E-value=5.1e-08 Score=69.59 Aligned_cols=83 Identities=13% Similarity=0.181 Sum_probs=56.7
Q ss_pred CCC--eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCCCc---CccC--------CCCCc---
Q 032841 26 KNK--ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGDRP---TWRN--------PQHPF--- 88 (132)
Q Consensus 26 ~~~--~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~~~---~~~~--------~~~~~--- 88 (132)
.|+ .+++.|||+ |||.|....|.+.++.+++. .++.++.|+++... .|.+ ....|
T Consensus 29 ~Gk~~vvL~f~~a~--------~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil 100 (220)
T 1xcc_A 29 IENSWAILFSHPND--------FTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIV 100 (220)
T ss_dssp TTTSEEEEECCSCT--------TCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEE
T ss_pred cCCCeEEEEEECCC--------CCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeE
Confidence 355 444555888 99999999999999988875 47999999987532 2211 11122
Q ss_pred -----ccccccccc------------ccceEEEEe-CCeEeEEecC
Q 032841 89 -----RVNSRFKLT------------GVPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 89 -----~~~~~~~v~------------~vPt~~~~~-~g~~~~~~~~ 116 (132)
.++..|++. .+|++++++ +|+...++.+
T Consensus 101 ~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~ 146 (220)
T 1xcc_A 101 CDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLY 146 (220)
T ss_dssp ECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEE
T ss_pred ECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEec
Confidence 234567773 489999997 4776666643
No 250
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.54 E-value=3.8e-08 Score=60.40 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=47.8
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.+.+.. +.+-.++++......++...-.+.+.+++.++|++++ +|+
T Consensus 14 v~ly~~~--------~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~- 76 (92)
T 3ic4_A 14 VLMYGLS--------TCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK- 76 (92)
T ss_dssp SEEEECT--------TCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE-
T ss_pred EEEEECC--------CChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE-
Confidence 4567775 9999999999998863 3344566653210000000001345688999999977 664
Q ss_pred eEEecCcchhcHHHHHHhhh
Q 032841 111 SGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 111 ~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+.|. +.+.|+++|+
T Consensus 77 --~i~G~---~~~~l~~~l~ 91 (92)
T 3ic4_A 77 --HVLGY---NEEKLKELIR 91 (92)
T ss_dssp --EEESC---CHHHHHHHHH
T ss_pred --EEeCC---CHHHHHHHhc
Confidence 34453 5677888876
No 251
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.48 E-value=1e-07 Score=56.97 Aligned_cols=60 Identities=18% Similarity=0.348 Sum_probs=40.6
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.+.+. ++.+..+|++..+.... .+.+.+++.++|+++ .+|+.
T Consensus 3 i~~y~~~--------~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~-----~~~~~~~~~~vP~l~--~~g~~ 61 (82)
T 1fov_A 3 VEIYTKE--------TCPYCHRAKALLSSK------GVSFQELPIDGNAAKRE-----EMIKRSGRTTVPQIF--IDAQH 61 (82)
T ss_dssp EEEEECS--------SCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHH-----HHHHHHSSCCSCEEE--ETTEE
T ss_pred EEEEECC--------CChhHHHHHHHHHHC------CCCcEEEECCCCHHHHH-----HHHHHhCCCCcCEEE--ECCEE
Confidence 4567775 999999999999875 35566778875331100 023467899999984 37754
Q ss_pred e
Q 032841 111 S 111 (132)
Q Consensus 111 ~ 111 (132)
+
T Consensus 62 i 62 (82)
T 1fov_A 62 I 62 (82)
T ss_dssp E
T ss_pred E
Confidence 3
No 252
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.46 E-value=5.2e-08 Score=59.82 Aligned_cols=60 Identities=17% Similarity=0.379 Sum_probs=40.3
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.+++. ++.+..+|++..+.... .+.+.+++.++|++ +.+|+.
T Consensus 8 v~ly~~~--------~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~-----~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 8 VIIYTRP--------GCPYCARAKALLARK------GAEFNEIDASATPELRA-----EMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHH-----HHHHHHTSSCCCEE--EETTEE
T ss_pred EEEEECC--------CChhHHHHHHHHHHc------CCCcEEEECCCCHHHHH-----HHHHHhCCCCcCEE--EECCEE
Confidence 5667776 999999999988874 35677788875431100 02346789999975 347754
Q ss_pred e
Q 032841 111 S 111 (132)
Q Consensus 111 ~ 111 (132)
+
T Consensus 67 i 67 (92)
T 2khp_A 67 V 67 (92)
T ss_dssp E
T ss_pred E
Confidence 3
No 253
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.45 E-value=5.1e-07 Score=61.49 Aligned_cols=43 Identities=21% Similarity=0.440 Sum_probs=36.5
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
++++++|.|+.- .||+|+++.|.+.++.+++++++.+..+.+.
T Consensus 20 ~~~~~vvEf~dy--------~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~ 62 (184)
T 4dvc_A 20 SSSPVVSEFFSF--------YCPHCNTFEPIIAQLKQQLPEGAKFQKNHVS 62 (184)
T ss_dssp CSSCEEEEEECT--------TCHHHHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred CCCCEEEEEECC--------CCHhHHHHhHHHHHHHhhcCCceEEEEEecC
Confidence 467888998875 9999999999999999999877777777654
No 254
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.40 E-value=7.5e-07 Score=58.30 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=67.4
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+.+++ +.++. .+++++|-|+++ ||++| .+.+.++++.+ +.+.|+.++..+
T Consensus 26 i~s~~e~-e~fi~---~~~v~VVGfF~~--------~~~~~---~~~F~~~A~~~-~d~~F~~t~~~~------------ 77 (124)
T 2l4c_A 26 LTDVPAA-MEFIA---ATEVAVIGFFQD--------LEIPA---VPILHSMVQKF-PGVSFGISTDSE------------ 77 (124)
T ss_dssp CCSHHHH-HHHHH---TSSEEEEEECSC--------TTSTH---HHHHHHHHHHC-TTSEEEEECCHH------------
T ss_pred cCCHHHH-HHHHh---cCCCEEEEEECC--------CCChh---HHHHHHHHHhC-CCceEEEEChHH------------
Confidence 3455554 33454 678899999998 99999 57899999998 689998775322
Q ss_pred ccccccccccceEEEEeCCe-EeEEecCc--chhcHHHHHHhhhc
Q 032841 90 VNSRFKLTGVPTLFRWENDI-VSGRLEDH--EAHLEHKIKALLSA 131 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~-~~~~~~~~--~~~~~~~l~~~l~~ 131 (132)
++++|+++ .|++++|+++. ....+.|. +..+.+.|.+||..
T Consensus 78 v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 78 VLTHYNIT-GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp HHHHTTCC-SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred HHHHcCCC-CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 66789998 89999999853 23345441 13578889999874
No 255
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.38 E-value=3e-07 Score=66.08 Aligned_cols=78 Identities=12% Similarity=0.102 Sum_probs=54.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCC-ChhHH-----hhhHHHHHHHHhCCCCcEEEEEEeCCCc---Ccc------------CC
Q 032841 26 KNKANFILFLADKDPSTSLSW-CPDCV-----RAEPVIYKTLEASPDDIALLQAYVGDRP---TWR------------NP 84 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pW-C~~C~-----~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~------------~~ 84 (132)
.+++++|+||++ | ||+|. ...|.+.+. + .++.++.|+.+... .|. |+
T Consensus 47 ~Gk~vVL~F~ps--------~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~ 114 (224)
T 3keb_A 47 SHTPKLIVTLLS--------VDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDSPSSLARARHEHGLPNIALLSTL 114 (224)
T ss_dssp TTCCEEEEECSC--------TTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEEST
T ss_pred CCCcEEEEEEeC--------CCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcC
Confidence 578999999998 6 99999 778877776 4 47899999987532 121 11
Q ss_pred CCCccccccccccc---------cceEEEEe-CCeEeEEecC
Q 032841 85 QHPFRVNSRFKLTG---------VPTLFRWE-NDIVSGRLED 116 (132)
Q Consensus 85 ~~~~~~~~~~~v~~---------vPt~~~~~-~g~~~~~~~~ 116 (132)
. .-.+++.|||.. +|+.++++ +|.+..+...
T Consensus 115 ~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~ 155 (224)
T 3keb_A 115 R-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERL 155 (224)
T ss_dssp T-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEEC
T ss_pred C-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEec
Confidence 0 112456788864 79999997 5777655443
No 256
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.35 E-value=2.1e-07 Score=59.77 Aligned_cols=82 Identities=15% Similarity=0.262 Sum_probs=47.0
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++.|+++ |||+|+++.+.|.+. ++.+-.++++..++ .+...-.+....|..++|++++ +|+.
T Consensus 19 v~vy~~~--------~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~--~~~~~~~l~~~~g~~tvP~vfi--~g~~ 80 (114)
T 3h8q_A 19 VVIFSKS--------YCPHSTRVKELFSSL------GVECNVLELDQVDD--GARVQEVLSEITNQKTVPNIFV--NKVH 80 (114)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEETTTSTT--HHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEcC--------CCCcHHHHHHHHHHc------CCCcEEEEecCCCC--hHHHHHHHHHHhCCCccCEEEE--CCEE
Confidence 3447776 999999999999875 34456677765320 0000000234567889999865 7755
Q ss_pred eEEecCc-chhcHHHHHHhhh
Q 032841 111 SGRLEDH-EAHLEHKIKALLS 130 (132)
Q Consensus 111 ~~~~~~~-~~~~~~~l~~~l~ 130 (132)
++-.... .......|..+|+
T Consensus 81 igG~d~l~~l~~~G~L~~~l~ 101 (114)
T 3h8q_A 81 VGGCDQTFQAYQSGLLQKLLQ 101 (114)
T ss_dssp EESHHHHHHHHHHTHHHHHHH
T ss_pred EeCHHHHHHHHHCCCHHHHhc
Confidence 4422211 2234445666555
No 257
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.35 E-value=6.7e-07 Score=56.21 Aligned_cols=80 Identities=14% Similarity=0.219 Sum_probs=46.2
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc-ccccccccccceEEEEeC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR-VNSRFKLTGVPTLFRWEN 107 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~v~~vPt~~~~~~ 107 (132)
.-++.|+++ |||+|+++++.+.+.. +.+-.++++.... .+....+. +...+++.++|++++ ++
T Consensus 22 ~~v~ly~~~--------~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~-~~~~~~~~~l~~~~g~~~vP~l~i-~~ 85 (103)
T 3nzn_A 22 GKVIMYGLS--------TCVWCKKTKKLLTDLG------VDFDYVYVDRLEG-KEEEEAVEEVRRFNPSVSFPTTII-ND 85 (103)
T ss_dssp SCEEEEECS--------SCHHHHHHHHHHHHHT------BCEEEEEGGGCCH-HHHHHHHHHHHHHCTTCCSCEEEE-TT
T ss_pred CeEEEEcCC--------CCchHHHHHHHHHHcC------CCcEEEEeeccCc-ccHHHHHHHHHHhCCCCccCEEEE-CC
Confidence 335668886 9999999999998862 3455566654210 00000000 112358999999866 33
Q ss_pred CeEeEEecCcchhcHHHHHHhhh
Q 032841 108 DIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 108 g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
|+. +.| .+.+.|+++|+
T Consensus 86 ~~~---igg---~~~~~l~~~L~ 102 (103)
T 3nzn_A 86 EKA---IVG---FKEKEIRESLG 102 (103)
T ss_dssp TEE---EES---CCHHHHHHHTT
T ss_pred CEE---EEc---CCHHHHHHHhC
Confidence 332 333 34556777764
No 258
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.31 E-value=1.2e-06 Score=61.10 Aligned_cols=43 Identities=30% Similarity=0.548 Sum_probs=38.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
++++++|.|+.. |||+|+.+.|.+.++.+++++++.|..+.+.
T Consensus 23 ~~~v~vv~f~d~--------~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGY--------FCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECT--------TCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECC--------CChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 468899999997 9999999999999999999888888888875
No 259
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.28 E-value=3.7e-07 Score=56.80 Aligned_cols=60 Identities=18% Similarity=0.324 Sum_probs=39.1
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccc-cccccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNS-RFKLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~v~~vPt~~~~~~g~ 109 (132)
++.|+.+ |||+|++.+..|.+. ++.|..+|++..++-.+ . +.+ .-|.+++|+++ +.+|.
T Consensus 6 I~vYs~~--------~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~---~--~~~~~~G~~tVP~I~-i~Dg~ 65 (92)
T 2lqo_A 6 LTIYTTS--------WCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAE---F--VGSVNGGNRTVPTVK-FADGS 65 (92)
T ss_dssp EEEEECT--------TCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHH---H--HHHHSSSSSCSCEEE-ETTSC
T ss_pred EEEEcCC--------CCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHH---H--HHHHcCCCCEeCEEE-EeCCE
Confidence 4556665 999999999888763 56788889877552111 0 111 23788999975 45664
Q ss_pred E
Q 032841 110 V 110 (132)
Q Consensus 110 ~ 110 (132)
.
T Consensus 66 ~ 66 (92)
T 2lqo_A 66 T 66 (92)
T ss_dssp E
T ss_pred E
Confidence 3
No 260
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=98.26 E-value=1.8e-07 Score=61.62 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=41.0
Q ss_pred EEEEEeeCCCCCCCCCChhHHhh-hHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRA-EPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~-~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
++.|+.+ |||+|+++ .+.|.+... ..+.+..++++..+. .+...-.+...+|+.++|++ |.+|+
T Consensus 39 Vvvy~~~--------~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~--~~~~~~~L~~~~g~~tVP~v--fi~g~ 103 (129)
T 3ctg_A 39 VFVAAKT--------YCPYCKATLSTLFQELNV---PKSKALVLELDEMSN--GSEIQDALEEISGQKTVPNV--YINGK 103 (129)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTT--HHHHHHHHHHHHSCCSSCEE--EETTE
T ss_pred EEEEECC--------CCCchHHHHHHHHHhcCc---cCCCcEEEEccccCC--HHHHHHHHHHHhCCCCCCEE--EECCE
Confidence 5667775 99999999 887766431 125666777765421 00000014456899999996 44776
Q ss_pred EeE
Q 032841 110 VSG 112 (132)
Q Consensus 110 ~~~ 112 (132)
.++
T Consensus 104 ~ig 106 (129)
T 3ctg_A 104 HIG 106 (129)
T ss_dssp EEE
T ss_pred EEc
Confidence 554
No 261
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.22 E-value=3.2e-07 Score=55.50 Aligned_cols=61 Identities=15% Similarity=0.111 Sum_probs=36.9
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCc-cCCCCCccccccccc-----cccceEEE
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTW-RNPQHPFRVNSRFKL-----TGVPTLFR 104 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~v-----~~vPt~~~ 104 (132)
++.|+++ |||+|+++.+.|.+.. -.+.++.+|+...... .+ +.+.++. .++|++++
T Consensus 6 v~ly~~~--------~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~e------l~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 6 VKIYTRN--------GCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYD------EMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHH------HHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEcC--------CChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHH------HHHHhCCCCCCCCccCEEEE
Confidence 5566665 9999999999887642 2345555554332100 01 2334555 99999855
Q ss_pred EeCCeEe
Q 032841 105 WENDIVS 111 (132)
Q Consensus 105 ~~~g~~~ 111 (132)
+|+.+
T Consensus 68 --~g~~i 72 (89)
T 3msz_A 68 --DDEHI 72 (89)
T ss_dssp --TTEEE
T ss_pred --CCEEE
Confidence 77543
No 262
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.21 E-value=2.6e-06 Score=57.23 Aligned_cols=75 Identities=24% Similarity=0.401 Sum_probs=49.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC---c-----------------CccC--
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR---P-----------------TWRN-- 83 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~---~-----------------~~~~-- 83 (132)
+++.+++.|+-. +||.|+++.+.+.+ + ++++++...+.-. + .|.+
T Consensus 13 ~a~~~vv~f~D~--------~Cp~C~~~~~~l~~----l-~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~ 79 (147)
T 3gv1_A 13 NGKLKVAVFSDP--------DCPFCKRLEHEFEK----M-TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWM 79 (147)
T ss_dssp TCCEEEEEEECT--------TCHHHHHHHHHHTT----C-CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHH
T ss_pred CCCEEEEEEECC--------CChhHHHHHHHHhh----c-CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHH
Confidence 567777777764 99999999998765 3 3678877775431 0 1210
Q ss_pred -----CC----C------CccccccccccccceEEEEeCCeEeEEecCc
Q 032841 84 -----PQ----H------PFRVNSRFKLTGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 84 -----~~----~------~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~ 117 (132)
+. . ...++.++||+|+||+++ .+|+ ++.|.
T Consensus 80 ~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~ 124 (147)
T 3gv1_A 80 RKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGY 124 (147)
T ss_dssp HHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESC
T ss_pred hCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCC
Confidence 00 0 112457899999999988 6675 45565
No 263
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.17 E-value=1.1e-06 Score=60.96 Aligned_cols=44 Identities=14% Similarity=0.303 Sum_probs=37.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeCC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~~ 77 (132)
+.++++|.|++. |||+|+.+.|.+ .++.++++++++|+.+++.-
T Consensus 13 ~~~~~vvef~d~--------~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSF--------YCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECT--------TCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCCEEEEEECC--------CChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 457889999986 999999999986 67878888789999999764
No 264
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.15 E-value=2.7e-07 Score=58.77 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=41.9
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
.++|++.++. .+||||+|+++.+.|.+. ++.+..+|++..++... .+...++..++|++ |.+|
T Consensus 16 ~vvvy~~g~~----~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~-----~l~~~~g~~~vP~i--fi~g 78 (109)
T 1wik_A 16 SVMLFMKGNK----QEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQ-----GLKTFSNWPTYPQL--YVRG 78 (109)
T ss_dssp SEEEEESSTT----TCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHH-----HHHHHHSCCSSCEE--ECSS
T ss_pred CEEEEEecCC----CCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHH-----HHHHHhCCCCCCEE--EECC
Confidence 4555554421 124999999999998774 46788889876431111 02234678899985 4467
Q ss_pred eEeE
Q 032841 109 IVSG 112 (132)
Q Consensus 109 ~~~~ 112 (132)
+.++
T Consensus 79 ~~ig 82 (109)
T 1wik_A 79 DLVG 82 (109)
T ss_dssp SEEE
T ss_pred EEEc
Confidence 5443
No 265
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.94 E-value=1.6e-05 Score=59.82 Aligned_cols=81 Identities=9% Similarity=0.117 Sum_probs=52.6
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccC-CCCC--------cccccc
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRN-PQHP--------FRVNSR 93 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~-~~~~--------~~~~~~ 93 (132)
.|++++|+||-. .|||.|....+.+.+ ...+++.++.|+.|... .|.+ .+-+ -.+++.
T Consensus 23 ~Gk~vvl~F~p~-------~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ 92 (322)
T 4eo3_A 23 YGKYTILFFFPK-------AGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEF 92 (322)
T ss_dssp TTSEEEEEECSS-------TTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHH
T ss_pred CCCeEEEEEECC-------CCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHh
Confidence 689999999943 399999988877754 22347889999887532 1111 0111 134678
Q ss_pred ccc----cccceEEEEeC-CeEeEEecC
Q 032841 94 FKL----TGVPTLFRWEN-DIVSGRLED 116 (132)
Q Consensus 94 ~~v----~~vPt~~~~~~-g~~~~~~~~ 116 (132)
||| ..+|+.++++. |.....+.+
T Consensus 93 ygv~~~~~~~r~tfiId~~G~i~~~~~~ 120 (322)
T 4eo3_A 93 FNVLENGKTVRSTFLIDRWGFVRKEWRR 120 (322)
T ss_dssp TTCEETTEECCEEEEECTTSBEEEEEES
T ss_pred cCCCCCCcCccEEEEECCCCEEEEEEeC
Confidence 998 45888888874 766544444
No 266
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.94 E-value=3.8e-05 Score=53.13 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=54.4
Q ss_pred CCCeE-EEEEEeeCCCCCCCCCChhHHh-hhHHHHHHHHhCC-CCc-EEEEEEeCCCc---CccC-CCCC--cc------
Q 032841 26 KNKAN-FILFLADKDPSTSLSWCPDCVR-AEPVIYKTLEASP-DDI-ALLQAYVGDRP---TWRN-PQHP--FR------ 89 (132)
Q Consensus 26 ~~~~v-~v~F~a~~~~~~~~pWC~~C~~-~~p~~~~~~~~~~-~~~-~~~~v~~~~~~---~~~~-~~~~--~~------ 89 (132)
.++++ ++.|+++ |||.|.. ..|.+.+.++++. .++ .++.|+++... .|.. ..-+ |.
T Consensus 46 ~Gk~vVL~fyP~~--------~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~~ 117 (176)
T 4f82_A 46 AGKRVVIFGLPGA--------FTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADGS 117 (176)
T ss_dssp TTCEEEEEEESCT--------TCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTT
T ss_pred CCCeEEEEEEcCC--------CCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcCc
Confidence 35544 5566787 9999999 9999999988875 467 88999987622 2321 1111 32
Q ss_pred --cccccccc-----------ccceEEEEeCCeEeEEecCc
Q 032841 90 --VNSRFKLT-----------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 90 --~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~~ 117 (132)
+++.||+. +.|+.+++++|+......+.
T Consensus 118 ~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 118 AAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp CHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred hHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 34456552 34766666889887666544
No 267
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.91 E-value=1e-05 Score=57.49 Aligned_cols=81 Identities=20% Similarity=0.279 Sum_probs=58.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
+++.++|-|+++ || ....+.+.++++.+. .+.|.... .. + ++++|++++ |++++|
T Consensus 26 ~~~v~vVgff~~--------~~---~~~~~~f~~~A~~l~-~~~F~~t~--~~----~------v~~~~~v~~-p~i~lf 80 (227)
T 4f9z_D 26 ATEVAVIGFFQD--------LE---IPAVPILHSMVQKFP-GVSFGIST--DS----E------VLTHYNITG-NTICLF 80 (227)
T ss_dssp TSSEEEEEECSC--------SC---STHHHHHHHHTTTCT-TSEEEEEC--CH----H------HHHHTTCCS-SEEEEE
T ss_pred cCCeEEEEEecC--------CC---chhHHHHHHHHHhCC-CceEEEEC--CH----H------HHHHcCCCC-CeEEEE
Confidence 678999999997 95 578899999999884 78887643 22 2 677899998 999999
Q ss_pred eCCe-EeEEecCc--chhcHHHHHHhhhc
Q 032841 106 ENDI-VSGRLEDH--EAHLEHKIKALLSA 131 (132)
Q Consensus 106 ~~g~-~~~~~~~~--~~~~~~~l~~~l~~ 131 (132)
+++. ....+.|. +..+.+.|.+||..
T Consensus 81 k~~~~~~~~~~~~~~g~~~~~~l~~fi~~ 109 (227)
T 4f9z_D 81 RLVDNEQLNLEDEDIESIDATKLSRFIEI 109 (227)
T ss_dssp ETTTTEEEEECHHHHHTCCHHHHHHHHHH
T ss_pred EecCcccccccccccCCCCHHHHHHHHHH
Confidence 9742 22234331 23567788888864
No 268
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.91 E-value=1.6e-05 Score=55.03 Aligned_cols=83 Identities=13% Similarity=-0.021 Sum_probs=55.1
Q ss_pred CCCCCeEEEEEEeeCCCCCCCCCChhHHhhhH------HHHHHHHhCCCCcEEEEEEeCCCcCcc------CCCCCcccc
Q 032841 24 APKNKANFILFLADKDPSTSLSWCPDCVRAEP------VIYKTLEASPDDIALLQAYVGDRPTWR------NPQHPFRVN 91 (132)
Q Consensus 24 ~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p------~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~~~~~~ 91 (132)
..++|+++|+++++ ||++|..+.. .+.++.+ .++.+..+|++....-. .....++++
T Consensus 52 k~e~K~LlVyLhs~--------~~~~~~~f~~~~L~~~~V~~~l~---~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a 120 (178)
T 2ec4_A 52 ARDRKLLAIYLHHD--------ESVLTNVFCSQMLCAESIVSYLS---QNFITWAWDLTKDSNRARFLTMCNRHFGSVVA 120 (178)
T ss_dssp TTTCCEEEEEEECS--------SCSHHHHHHHHTTTCHHHHHHHH---HTEEEEEEECCSHHHHHHHHHHHHHHTCHHHH
T ss_pred hhhCcEEEEEEeCC--------CCccHHHHHHHhcCCHHHHHHHH---cCEEEEEEeCCCchhhhhhhhhhhhhhHHHHH
Confidence 35789999999997 9999998863 3444443 36888888987633000 000011122
Q ss_pred ---ccccccccceEEEEeC----CeEeEEecCc
Q 032841 92 ---SRFKLTGVPTLFRWEN----DIVSGRLEDH 117 (132)
Q Consensus 92 ---~~~~v~~vPt~~~~~~----g~~~~~~~~~ 117 (132)
..|++.++|+++++.. .+.+.++.|.
T Consensus 121 ~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~ 153 (178)
T 2ec4_A 121 QTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGN 153 (178)
T ss_dssp HHHHHSCSTTCSEEEEECCCSSCCCEEEEECSC
T ss_pred HHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCC
Confidence 2389999999999953 3567888886
No 269
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.91 E-value=2.5e-06 Score=56.62 Aligned_cols=66 Identities=11% Similarity=0.124 Sum_probs=40.3
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
.++|+.+++. ..||||.|+++...|.+. ++.+..+|++..++..+ .+....|..++|.++ -+|
T Consensus 36 ~Vvvy~ks~~----~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~-----~L~~~~G~~tvP~Vf--I~G 98 (135)
T 2wci_A 36 PILLYMKGSP----KLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRA-----ELPKYANWPTFPQLW--VDG 98 (135)
T ss_dssp SEEEEESBCS----SSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHH-----HHHHHHTCCSSCEEE--ETT
T ss_pred CEEEEEEecC----CCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHH-----HHHHHHCCCCcCEEE--ECC
Confidence 4666666521 124999999999988764 45677888875432111 022335777889864 367
Q ss_pred eEe
Q 032841 109 IVS 111 (132)
Q Consensus 109 ~~~ 111 (132)
+.+
T Consensus 99 ~~i 101 (135)
T 2wci_A 99 ELV 101 (135)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 270
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.86 E-value=5.4e-06 Score=53.04 Aligned_cols=54 Identities=11% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEe
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVS 111 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~ 111 (132)
||||.|+++...|.+. ++.+..+|++..++.++ .+....|..++|.+++ +|+.+
T Consensus 29 ~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~-----~l~~~~g~~tvP~ifi--~g~~i 82 (111)
T 3zyw_A 29 PRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQ-----GLKAYSSWPTYPQLYV--SGELI 82 (111)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHH-----HHHHHHTCCSSCEEEE--TTEEE
T ss_pred CcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHH-----HHHHHHCCCCCCEEEE--CCEEE
Confidence 4999999999988764 35566778865442211 0222346788999754 66443
No 271
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.81 E-value=1.9e-05 Score=54.36 Aligned_cols=43 Identities=26% Similarity=0.431 Sum_probs=36.9
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
.++++++.|+.. |||+|+.+.|.+.++.++++.++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~--------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGY--------FCVHCHHFDPLLLKLGKALPSDAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECT--------TSCCTTSSCHHHHHHHHHSCTTEEEEEEECC
T ss_pred CCCcEEEEEECC--------CChhHHHHhHHHHHHHHHCCCceEEEEeccc
Confidence 467888889886 9999999999999999998877888877763
No 272
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.81 E-value=8.9e-06 Score=56.26 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=34.2
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
+++++|.|+.- |||+|+++.|.+.++.+++ ++.|..+.+.
T Consensus 22 ~~~~vvef~d~--------~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFAL--------SCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECT--------TCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECC--------CChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 67899999997 9999999999999998887 4667777653
No 273
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.78 E-value=5.8e-05 Score=53.81 Aligned_cols=77 Identities=18% Similarity=0.308 Sum_probs=48.5
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccc
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRV 90 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 90 (132)
.+.+++++.+....... ..++.|+.+ |||.|++++..|++. ++.+-.+|++....-. .+
T Consensus 153 ~~~~~il~~l~~~~i~~-~~i~ly~~~--------~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~------~l 211 (241)
T 1nm3_A 153 SDADTMLKYLAPQHQVQ-ESISIFTKP--------GCPFCAKAKQLLHDK------GLSFEEIILGHDATIV------SV 211 (241)
T ss_dssp SSHHHHHHHHCTTSCCC-CCEEEEECS--------SCHHHHHHHHHHHHH------TCCCEEEETTTTCCHH------HH
T ss_pred cCHHHHHHHhhhhcccc-ceEEEEECC--------CChHHHHHHHHHHHc------CCceEEEECCCchHHH------HH
Confidence 46777776555432222 334555664 999999999998875 3455667776543100 13
Q ss_pred cccccccccceEEEEeCCeE
Q 032841 91 NSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~ 110 (132)
...++..++|++++ +|+.
T Consensus 212 ~~~~g~~~vP~~~~--~g~~ 229 (241)
T 1nm3_A 212 RAVSGRTTVPQVFI--GGKH 229 (241)
T ss_dssp HHHTCCSSSCEEEE--TTEE
T ss_pred HHHhCCCCcCEEEE--CCEE
Confidence 44678899999853 6643
No 274
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.75 E-value=4.9e-05 Score=51.45 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=35.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC--CCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS--PDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~--~~~~~~~~v~~~ 76 (132)
.++..++.|+.. |||+|+.+.|.+.++.+++ ++++.++...+.
T Consensus 26 ~a~v~i~~f~D~--------~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 26 NAPVKMIEFINV--------RCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp TCSEEEEEEECT--------TCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCCeEEEEEECC--------CCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 456677777775 9999999999999988887 667888888764
No 275
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.74 E-value=7.1e-05 Score=56.26 Aligned_cols=87 Identities=13% Similarity=0.130 Sum_probs=60.2
Q ss_pred CeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEEEeCCCcCccCCCCCcccc----cccccc-ccc
Q 032841 28 KANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQAYVGDRPTWRNPQHPFRVN----SRFKLT-GVP 100 (132)
Q Consensus 28 ~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~v~-~vP 100 (132)
+..++.|... ||+.|....+.++++++++.+ ++.|+.+|.+... . .+ +.||+. +.|
T Consensus 246 ~~~~l~f~~~--------~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~---~------~~~~~~~~~gi~~~~P 308 (350)
T 1sji_A 246 GIHIVAFAER--------SDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFP---L------LVAYWEKTFKIDLFKP 308 (350)
T ss_dssp SEEEEEECCT--------TSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCH---H------HHHHHHHHCCSCTTSC
T ss_pred CcEEEEEEcC--------CCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhH---H------HHHHHHhhcCCCccCC
Confidence 3445557765 999999999999999999864 7999999976543 1 33 468887 589
Q ss_pred eEEEEeC--CeEeEE-ecC-cchhcHHHHHHhhhc
Q 032841 101 TLFRWEN--DIVSGR-LED-HEAHLEHKIKALLSA 131 (132)
Q Consensus 101 t~~~~~~--g~~~~~-~~~-~~~~~~~~l~~~l~~ 131 (132)
++++++. +..-.. +.+ .+....+.|.+|++.
T Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d 343 (350)
T 1sji_A 309 QIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIED 343 (350)
T ss_dssp EEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHH
T ss_pred cEEEEecccccccccCCCcccccCCHHHHHHHHHH
Confidence 9999985 321111 222 134566778888763
No 276
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.73 E-value=6.6e-05 Score=51.45 Aligned_cols=42 Identities=12% Similarity=0.226 Sum_probs=35.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEe
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYV 75 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~ 75 (132)
.++..++.|+.. |||+|..+.|.+.++.+++++++.+..+.+
T Consensus 24 ~a~v~i~~f~d~--------~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGY--------TCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECT--------TCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECC--------CChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 355678888875 999999999999999998887788877776
No 277
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.71 E-value=2.8e-05 Score=54.03 Aligned_cols=43 Identities=19% Similarity=0.432 Sum_probs=36.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH---HHHHHhCCCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVI---YKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~---~~~~~~~~~~~~~~~v~~~ 76 (132)
++++.+|.|+.- |||+|+++.|.+ .++.++++++++|+.+++.
T Consensus 20 ~~~~~vvef~d~--------~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSF--------YCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECT--------TCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCCeEEEEECC--------CChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 457889999996 999999999987 6888889877888888865
No 278
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=97.70 E-value=8.3e-06 Score=51.86 Aligned_cols=55 Identities=9% Similarity=0.159 Sum_probs=34.9
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEeE
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSG 112 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~ 112 (132)
||||.|++....|.+. ++.+..+|++..++..+ .+....+..++|.+++ +|+.++
T Consensus 31 p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~-----~l~~~~g~~tvP~ifi--~g~~iG 85 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQ-----GLKEYSNWPTFPQLYI--GGEFFG 85 (109)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHH-----HHHHHHTCSSSCEEEE--TTEEEE
T ss_pred CCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHH-----HHHHHHCCCCCCeEEE--CCEEEe
Confidence 4999999999988874 35566778765431111 0223347789997643 675443
No 279
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.65 E-value=5.2e-06 Score=54.51 Aligned_cols=62 Identities=11% Similarity=0.110 Sum_probs=36.6
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccCCCCCccccccccccccceEEEEeC
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRNPQHPFRVNSRFKLTGVPTLFRWEN 107 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~v~~vPt~~~~~~ 107 (132)
++.|+.+ |||.|+++...|.+... + ++.+..++++... +.++ .+....|..++|++++ +
T Consensus 16 Vvvysk~--------~Cp~C~~ak~lL~~~~~-~--~v~~~~idid~~~d~~~~~~-----~l~~~~G~~tVP~IfI--~ 77 (127)
T 3l4n_A 16 IIIFSKS--------TCSYSKGMKELLENEYQ-F--IPNYYIIELDKHGHGEELQE-----YIKLVTGRGTVPNLLV--N 77 (127)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHHEE-E--ESCCEEEEGGGSTTHHHHHH-----HHHHHHSCCSSCEEEE--T
T ss_pred EEEEEcC--------CCccHHHHHHHHHHhcc-c--CCCcEEEEecCCCCHHHHHH-----HHHHHcCCCCcceEEE--C
Confidence 5667775 99999999999988521 1 1234445554422 1111 0223357789999854 6
Q ss_pred CeE
Q 032841 108 DIV 110 (132)
Q Consensus 108 g~~ 110 (132)
|+.
T Consensus 78 G~~ 80 (127)
T 3l4n_A 78 GVS 80 (127)
T ss_dssp TEE
T ss_pred CEE
Confidence 643
No 280
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.63 E-value=2e-05 Score=50.28 Aligned_cols=55 Identities=13% Similarity=0.056 Sum_probs=33.9
Q ss_pred CCChhHH------hhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccc--------cccccceEEEEeCCeE
Q 032841 45 SWCPDCV------RAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF--------KLTGVPTLFRWENDIV 110 (132)
Q Consensus 45 pWC~~C~------~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~v~~vPt~~~~~~g~~ 110 (132)
||||.|+ ++...|++. ++.+..+|++..++.++ .+...+ +..++|.+++ +|+.
T Consensus 16 ~~C~~C~~~~~~~~ak~~L~~~------gi~y~~vdI~~~~~~~~-----~l~~~~~~~~~~~~g~~tvP~vfi--~g~~ 82 (111)
T 2ct6_A 16 SSSGFVAIKKKQQDVVRFLEAN------KIEFEEVDITMSEEQRQ-----WMYKNVPPEKKPTQGNPLPPQIFN--GDRY 82 (111)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHT------TCCEEEEETTTCHHHHH-----HHHHSCCTTTCCSSSSCCSCEEEE--TTEE
T ss_pred CCCCCcccchhHHHHHHHHHHc------CCCEEEEECCCCHHHHH-----HHHHHhcccccccCCCCCCCEEEE--CCEE
Confidence 3999999 676666652 46788899876542111 022233 6778998743 6654
Q ss_pred eE
Q 032841 111 SG 112 (132)
Q Consensus 111 ~~ 112 (132)
++
T Consensus 83 iG 84 (111)
T 2ct6_A 83 CG 84 (111)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 281
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=97.62 E-value=2.6e-05 Score=50.45 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=44.5
Q ss_pred hHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCc-EEEEEEeCCCcCccCCCCCcccc
Q 032841 13 FDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDI-ALLQAYVGDRPTWRNPQHPFRVN 91 (132)
Q Consensus 13 ~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~ 91 (132)
..+.++++++ ++ +|+|+-.++. ..||||.|++....|.+. ++ .+..+|++..++.++ .+.
T Consensus 9 ~~~~v~~~i~---~~-~Vvvfsk~t~----~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~-----~l~ 69 (118)
T 2wem_A 9 SAEQLDALVK---KD-KVVVFLKGTP----EQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQ-----GIK 69 (118)
T ss_dssp CHHHHHHHHH---HS-SEEEEESBCS----SSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHH-----HHH
T ss_pred HHHHHHHHhc---cC-CEEEEEecCC----CCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHH-----HHH
Confidence 3455555554 33 4444433321 125999999999988874 34 366677765432111 022
Q ss_pred ccccccccceEEEEeCCeEeE
Q 032841 92 SRFKLTGVPTLFRWENDIVSG 112 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~~g~~~~ 112 (132)
...+..++|.+++ +|+.++
T Consensus 70 ~~tg~~tvP~vfI--~g~~IG 88 (118)
T 2wem_A 70 DYSNWPTIPQVYL--NGEFVG 88 (118)
T ss_dssp HHHTCCSSCEEEE--TTEEEE
T ss_pred HHhCCCCcCeEEE--CCEEEe
Confidence 2346788999744 675443
No 282
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.59 E-value=2.4e-05 Score=50.77 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=35.0
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEe
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVS 111 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~ 111 (132)
||||.|+++...|.+..-. ...+..+|++...+.++ .+....|..++|.+++ +|+.+
T Consensus 29 p~Cp~C~~ak~lL~~~gv~---~~~~~~~dv~~~~~~~~-----~l~~~sg~~tvP~vfI--~g~~i 85 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQGVD---PAKFAAYNVLEDPELRE-----GIKEFSEWPTIPQLYV--NKEFI 85 (121)
T ss_dssp BCTTHHHHHHHHHHHHTBC---GGGEEEEECTTCHHHHH-----HHHHHHTCCSSCEEEE--TTEEE
T ss_pred CCCccHHHHHHHHHHcCCC---cceEEEEEecCCHHHHH-----HHHHHhCCCCCCeEEE--CCEEE
Confidence 5999999999999886211 11267788865442111 0223346778998744 67543
No 283
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.57 E-value=0.00031 Score=46.88 Aligned_cols=74 Identities=9% Similarity=-0.003 Sum_probs=49.2
Q ss_pred HHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccc--cceEEEEeC-CeEeEEecCcchhcHHHHH
Q 032841 50 CVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTG--VPTLFRWEN-DIVSGRLEDHEAHLEHKIK 126 (132)
Q Consensus 50 C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~--vPt~~~~~~-g~~~~~~~~~~~~~~~~l~ 126 (132)
=....+.+.++++++.+++.|+.+|.+... ... ....||++. +|++.+++. +.........+..+.+.|+
T Consensus 47 ~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~-~~~------~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~ 119 (147)
T 3bj5_A 47 YDGKLSNFKTAAESFKGKILFAFIDSDHTD-NQR------ILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERIT 119 (147)
T ss_dssp HHHHHHHHHHHHHTTTTTCEEEEECTTCGG-GHH------HHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCceEEEEEecchHh-HHH------HHHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHH
Confidence 556789999999999889999999973222 001 446789986 999999875 3222222222334466777
Q ss_pred Hhhh
Q 032841 127 ALLS 130 (132)
Q Consensus 127 ~~l~ 130 (132)
+|++
T Consensus 120 ~Fv~ 123 (147)
T 3bj5_A 120 EFCH 123 (147)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 284
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=97.50 E-value=4.9e-05 Score=45.97 Aligned_cols=52 Identities=10% Similarity=0.117 Sum_probs=33.1
Q ss_pred CChhHHhhhHHHHHHHHhCCCCcEEEEEEeC-----CCcCccCCCCCcccccccccc-----ccceEEEEeCCe
Q 032841 46 WCPDCVRAEPVIYKTLEASPDDIALLQAYVG-----DRPTWRNPQHPFRVNSRFKLT-----GVPTLFRWENDI 109 (132)
Q Consensus 46 WC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~~~~~~~~~~~~v~-----~vPt~~~~~~g~ 109 (132)
|||.|+++...|++. ++.+-.+|++ ..++..+ .+....+.. ++|++++ .+|+
T Consensus 13 ~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~-----~l~~~~g~~~~~~~tvP~v~i-~~g~ 74 (87)
T 1aba_A 13 KCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIA-----ELLTKLGRDTQIGLTMPQVFA-PDGS 74 (87)
T ss_dssp CCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHH-----HHHHHHTCSCCTTCCSCEEEC-TTSC
T ss_pred cCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHH-----HHHHHhCCCCCCCCccCEEEE-ECCE
Confidence 999999999888773 4567777876 3221100 033456777 8998754 3564
No 285
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=97.48 E-value=2.1e-05 Score=48.36 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=34.3
Q ss_pred CCChhH------HhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccccccc--ccccceEEEEeCCeEeE
Q 032841 45 SWCPDC------VRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFK--LTGVPTLFRWENDIVSG 112 (132)
Q Consensus 45 pWC~~C------~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--v~~vPt~~~~~~g~~~~ 112 (132)
||||.| +++...|.+. ++.+..+|++..++.++ .+...+| ..++|.+++ +|+.++
T Consensus 10 ~~C~~c~~~~~~~~ak~~L~~~------~i~~~~~di~~~~~~~~-----~l~~~~g~~~~~vP~ifi--~g~~ig 72 (93)
T 1t1v_A 10 SVTGSREIKSQQSEVTRILDGK------RIQYQLVDISQDNALRD-----EMRTLAGNPKATPPQIVN--GNHYCG 72 (93)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHT------TCCCEEEETTSCHHHHH-----HHHHHTTCTTCCSCEEEE--TTEEEE
T ss_pred CCCCCchhhHHHHHHHHHHHHC------CCceEEEECCCCHHHHH-----HHHHHhCCCCCCCCEEEE--CCEEEe
Confidence 399999 7777776652 46677888876432111 0223456 679998744 665443
No 286
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.44 E-value=0.00065 Score=51.50 Aligned_cols=90 Identities=14% Similarity=0.219 Sum_probs=61.7
Q ss_pred CeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEEEeCCCcCccCCCCCcccccccccc-ccceEEE
Q 032841 28 KANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQAYVGDRPTWRNPQHPFRVNSRFKLT-GVPTLFR 104 (132)
Q Consensus 28 ~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~-~vPt~~~ 104 (132)
++.++.|+.. +|+.|....+.++++++++.+ ++.|+.+|.+... . .-++ ..+.||+. ++|++++
T Consensus 248 ~~~~~~f~~~--------~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~---~-~l~~-~~~~fgl~~~~P~~~i 314 (367)
T 3us3_A 248 GIHIVAFAEE--------ADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFP---L-LVPY-WEKTFDIDLSAPQIGV 314 (367)
T ss_dssp TEEEEEECCT--------TSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCT---T-THHH-HHHHHTCCTTSCEEEE
T ss_pred CcEEEEEEcC--------CChhHHHHHHHHHHHHHHcCCCCceEEEEECCccch---h-HHHH-HHHhcCCCCCCCeEEE
Confidence 4566778776 999999999999999999986 6999999987644 1 0000 01247777 8999999
Q ss_pred EeCCeE-eEE--ecC-cchhcHHHHHHhhh
Q 032841 105 WENDIV-SGR--LED-HEAHLEHKIKALLS 130 (132)
Q Consensus 105 ~~~g~~-~~~--~~~-~~~~~~~~l~~~l~ 130 (132)
++.... ... +.+ .+..+.+.|.+|++
T Consensus 315 ~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~ 344 (367)
T 3us3_A 315 VNVTDADSVWMEMDDEEDLPSAEELEDWLE 344 (367)
T ss_dssp EETTTCCEEECCCCTTSCCCCHHHHHHHHH
T ss_pred EecccccceeecCCcccccCCHHHHHHHHH
Confidence 985322 112 222 13456777888875
No 287
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00021 Score=50.90 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=39.1
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCC
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~ 77 (132)
.|+.++|+|| ++ |||.|....+.|.+...++. .++.++.|++|.
T Consensus 51 ~GK~vVL~FyP~d--------~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds 96 (216)
T 3sbc_A 51 KGKYVVLAFIPLA--------FTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDS 96 (216)
T ss_dssp TTSEEEEEECSCT--------TSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEEcCC--------CCCcCchhhhHHHHhHHhhccCCceEEEeecCc
Confidence 6899999999 66 99999999999999988875 579999999886
No 288
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.22 E-value=0.00085 Score=50.98 Aligned_cols=87 Identities=14% Similarity=0.055 Sum_probs=57.0
Q ss_pred CCCeEEEEEEeeCCCCCCCCCC-hhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcccccccccc--ccceE
Q 032841 26 KNKANFILFLADKDPSTSLSWC-PDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLT--GVPTL 102 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC-~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~--~vPt~ 102 (132)
.+.+++|.|+.. || ..|..+...+.+++.++.+++.|+.+|.+... . ....||+. .+|.+
T Consensus 235 ~~~~~~v~f~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~---~------~~~~~gl~~~~~P~i 297 (382)
T 2r2j_A 235 EGLPFLILFHMK--------EDTESLEIFQNEVARQLISEKGTINFLHADCDKFR---H------PLLHIQKTPADCPVI 297 (382)
T ss_dssp TCCCEEEEEECT--------TCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTH---H------HHHHTTCCGGGCSEE
T ss_pred CCCcEEEEEecC--------CchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhH---H------HHHHcCCCccCCCEE
Confidence 678888889886 77 44666667777776666678999999977543 2 34567876 68999
Q ss_pred EEEeCCeEeEEecCc-chhcHHHHHHhhh
Q 032841 103 FRWENDIVSGRLEDH-EAHLEHKIKALLS 130 (132)
Q Consensus 103 ~~~~~g~~~~~~~~~-~~~~~~~l~~~l~ 130 (132)
+++..+.. ..+... +....+.|++|++
T Consensus 298 ~i~~~~~~-y~~~~~~~~~~~~~i~~F~~ 325 (382)
T 2r2j_A 298 AIDSFRHM-YVFGDFKDVLIPGKLKQFVF 325 (382)
T ss_dssp EEECSSCE-EECCCSGGGGSTTHHHHHHH
T ss_pred EEEcchhc-CCCCccccccCHHHHHHHHH
Confidence 88875432 223221 2223455666664
No 289
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=97.18 E-value=0.001 Score=48.89 Aligned_cols=69 Identities=16% Similarity=0.259 Sum_probs=44.7
Q ss_pred EEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc--CccCCCCC--c-----ccccccccccc-
Q 032841 30 NFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP--TWRNPQHP--F-----RVNSRFKLTGV- 99 (132)
Q Consensus 30 v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~--~-----~~~~~~~v~~v- 99 (132)
+.|..|++ ++||.|.+....|.++..+++ +..+..+++... -|+|+... + .+..++|.+++
T Consensus 44 ~~VelyTs-------~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVy 114 (270)
T 2axo_A 44 GVVELFTS-------QGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVY 114 (270)
T ss_dssp CEEEEEEC-------TTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCC
T ss_pred cEEEEEeC-------CCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCccc
Confidence 45555555 599999999999999877653 443445554333 46664431 1 13456899999
Q ss_pred -ceEEEEeCCe
Q 032841 100 -PTLFRWENDI 109 (132)
Q Consensus 100 -Pt~~~~~~g~ 109 (132)
|.+++ +|+
T Consensus 115 TPqI~I--ng~ 123 (270)
T 2axo_A 115 TPQAIL--NGR 123 (270)
T ss_dssp SSEEEE--TTT
T ss_pred CCEEEE--CCE
Confidence 99766 554
No 290
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.08 E-value=0.0014 Score=45.25 Aligned_cols=84 Identities=13% Similarity=0.239 Sum_probs=54.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHH-hhhHHHHHHHHhC-C-CCc-EEEEEEeCCC---cCccC-CCC-Ccc-------
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCV-RAEPVIYKTLEAS-P-DDI-ALLQAYVGDR---PTWRN-PQH-PFR------- 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~-~~~p~~~~~~~~~-~-~~~-~~~~v~~~~~---~~~~~-~~~-~~~------- 89 (132)
.+++++|+||=. .|||.|. ...+.+.+.+.++ . .++ .++.|.++.. ..|.. ... .|.
T Consensus 42 ~gk~vVL~fyP~-------~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~ 114 (182)
T 1xiy_A 42 NNKKILLISLPG-------AFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNS 114 (182)
T ss_dssp TTCEEEEEECSC-------TTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTS
T ss_pred CCCcEEEEEeCC-------CCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCch
Confidence 577888888765 4999999 8899999987776 4 466 4888888763 13321 111 232
Q ss_pred -cccccccc-----------ccceEEEEeCCeEeEEecC
Q 032841 90 -VNSRFKLT-----------GVPTLFRWENDIVSGRLED 116 (132)
Q Consensus 90 -~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~ 116 (132)
+++.||+. ...+.+++++|........
T Consensus 115 ~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~ 153 (182)
T 1xiy_A 115 SFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQE 153 (182)
T ss_dssp HHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEEC
T ss_pred HHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEEe
Confidence 34556652 2456667788877665543
No 291
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.05 E-value=0.0011 Score=45.21 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=35.3
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHH-HHHHHhCCCCcEEEEEEeC
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVI-YKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~-~~~~~~~~~~~~~~~v~~~ 76 (132)
.++++|.|+.. +||+|..+.+.+ .++.++++.++.+..+.+.
T Consensus 17 ~~~~~ief~d~--------~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSY--------ACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECT--------TCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeC--------cCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 56678888875 999999999999 8898888877888887764
No 292
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.01 E-value=0.0017 Score=46.55 Aligned_cols=92 Identities=15% Similarity=0.206 Sum_probs=61.5
Q ss_pred ccchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCcc
Q 032841 10 VSSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFR 89 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 89 (132)
+.+.+++ +.++. .++.++|-|+++ || ....+.+.+++..+.+.+.|+.+. . . +
T Consensus 11 l~s~~~~-~~~l~---~~~v~vvgff~~--------~~---~~~~~~f~~~A~~lr~~~~F~~~~--~-~---~------ 63 (252)
T 2h8l_A 11 LRTEEEF-KKFIS---DKDASIVGFFDD--------SF---SEAHSEFLKAASNLRDNYRFAHTN--V-E---S------ 63 (252)
T ss_dssp CCSHHHH-HHHHT---SSSCEEEEEESC--------TT---SHHHHHHHHHHHHTTTTSCEEEEC--C-H---H------
T ss_pred ecCHHHH-HHHhh---cCCeEEEEEECC--------CC---ChHHHHHHHHHHhcccCcEEEEEC--h-H---H------
Confidence 3444444 44443 567788888887 85 445678889999887788887763 1 1 1
Q ss_pred ccccccccccceEEEEeCCe-------EeEEe-cCcchhcHHHHHHhhhc
Q 032841 90 VNSRFKLTGVPTLFRWENDI-------VSGRL-EDHEAHLEHKIKALLSA 131 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~-------~~~~~-~~~~~~~~~~l~~~l~~ 131 (132)
++++|++++ |++++|+++. ....+ .|. .+.+.|.+||..
T Consensus 64 v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~--~~~~~l~~fi~~ 110 (252)
T 2h8l_A 64 LVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQK--MTSGKIKKFIQE 110 (252)
T ss_dssp HHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSS--CCHHHHHHHHHH
T ss_pred HHHHhCCCC-CcEEEEcchhhcccccccccccCCCC--cCHHHHHHHHHh
Confidence 667899997 9999998531 11223 332 477789999864
No 293
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=96.97 E-value=0.01 Score=41.07 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=29.3
Q ss_pred EEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEE
Q 032841 32 ILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAY 74 (132)
Q Consensus 32 v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~ 74 (132)
|.||.+ +-||.|-...|.+.++.++++.++.+...-
T Consensus 5 I~~~~D-------~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p 40 (208)
T 3kzq_A 5 LYYVHD-------PMCSWCWGYKPTIEKLKQQLPGVIQFEYVV 40 (208)
T ss_dssp EEEEEC-------TTCHHHHHHHHHHHHHHHHSCTTSEEEEEE
T ss_pred EEEEEC-------CCCchhhhhhHHHHHHHHhCCCCceEEEEe
Confidence 556666 699999999999999999987667666555
No 294
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=96.92 E-value=0.00095 Score=47.92 Aligned_cols=94 Identities=7% Similarity=0.069 Sum_probs=62.2
Q ss_pred ccchHHHHHHHhhhCCC-CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCc
Q 032841 10 VSSFDNVFDKFKSEAPK-NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPF 88 (132)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 88 (132)
+.+.+++ ++++. . ++.++|-|+++ || ....+.+.++++.+.+.+.|+.+. ...
T Consensus 11 l~s~~~~-~~~~~---~~~~v~vVgff~~--------~~---~~~~~~F~~~A~~lr~~~~F~~t~--~~~--------- 64 (250)
T 3ec3_A 11 ILTLKQV-QEFLK---DGDDVVILGVFQG--------VG---DPGYLQYQDAANTLREDYKFHHTF--STE--------- 64 (250)
T ss_dssp CCCHHHH-HHHHH---HCSSCEEEEECSC--------TT---CHHHHHHHHHHHHHTTTCCEEEEC--CHH---------
T ss_pred cCCHHHH-HHHHh---cCCCeEEEEEEcC--------CC---chHHHHHHHHHHhhhcCcEEEEEC--cHH---------
Confidence 3444554 33444 4 67888999887 85 456788899998886688887753 211
Q ss_pred cccccccccccceEEEEeCCe-------EeEEecCcchhcHHHHHHhhhc
Q 032841 89 RVNSRFKLTGVPTLFRWENDI-------VSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 89 ~~~~~~~v~~vPt~~~~~~g~-------~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
++++|++++ |++++|+.+. ....+.|....+.+.|.+||..
T Consensus 65 -v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~ 112 (250)
T 3ec3_A 65 -IAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVK 112 (250)
T ss_dssp -HHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred -HHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHH
Confidence 667899988 9999998531 1122333123567789999864
No 295
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=96.56 E-value=0.0012 Score=42.62 Aligned_cols=73 Identities=14% Similarity=0.167 Sum_probs=38.9
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCc-EEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEeEEecCc-chhcH
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDI-ALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDH-EAHLE 122 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~-~~~~~ 122 (132)
|.||.|+++...|... ++ .+..+|+...++.++ .+...-+-+++|.+++ +|+-++-.... .....
T Consensus 33 P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~-----~l~~~sg~~TvPqIFI--~g~~IGG~Ddl~~l~~~ 99 (118)
T 2wul_A 33 PQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQ-----GIKDYSNWPTIPQVYL--NGEFVGGCDILLQMHQN 99 (118)
T ss_dssp BSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHH-----HHHHHHTCCSSCEEEE--TTEEEECHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHH-----HHHHhccCCCCCeEeE--CCEEECCHHHHHHHHHC
Confidence 5799999999887654 22 256677766442221 0223345567777644 67544322111 22333
Q ss_pred HHHHHhhh
Q 032841 123 HKIKALLS 130 (132)
Q Consensus 123 ~~l~~~l~ 130 (132)
..|.++|+
T Consensus 100 GeL~~lL~ 107 (118)
T 2wul_A 100 GDLVEELK 107 (118)
T ss_dssp THHHHHHH
T ss_pred CCHHHHHH
Confidence 44555554
No 296
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.38 E-value=0.0015 Score=46.54 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=38.6
Q ss_pred CCCeEEEEEE-eeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcEEEEEEeCC
Q 032841 26 KNKANFILFL-ADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIALLQAYVGD 77 (132)
Q Consensus 26 ~~~~v~v~F~-a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~~~~v~~~~ 77 (132)
.|+.++|+|| +. |||.|......|.+.++++. .++.++.|++|.
T Consensus 55 ~GK~vVL~FyP~d--------~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds 100 (219)
T 3tue_A 55 KGKWVVLFFYPLD--------FTFVCPTEVIAFSDSVSRFNELNCEVLACSIDS 100 (219)
T ss_dssp TTSEEEEEECSCT--------TCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSC
T ss_pred CCCEEEEEEeccc--------CCCCCchhHhhHHHHHhhhccCCcEEEEeeCCc
Confidence 6789999999 65 99999999999999888775 478999999986
No 297
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.18 E-value=0.011 Score=41.18 Aligned_cols=43 Identities=19% Similarity=0.164 Sum_probs=32.4
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHH-HHHHHhCC--CCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVI-YKTLEASP--DDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~-~~~~~~~~--~~~~~~~v~~~ 76 (132)
.++..++.|+.- .||+|+++.+.+ ..+.++|. ++++|+..++.
T Consensus 28 ~a~vtvvef~D~--------~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 28 DAPVTVVEFGDY--------KCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TCSEEEEEEECT--------TCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECC--------CChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 456677777664 999999999987 45556673 57899988874
No 298
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=96.08 E-value=0.00047 Score=52.62 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=33.0
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhH-HHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEP-VIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
++.|+.+ |||.|+++.. .|++..-.+. .+.++ +++...+ ++...-.+.+..+.+++|.+++ +|+
T Consensus 263 VvVYsk~--------~CPyC~~Ak~~LL~~~gV~y~-eidVl--Eld~~~~--~~e~~~~L~~~tG~~TVPqVFI--~Gk 327 (362)
T 2jad_A 263 IFVASKT--------YCPYSHAALNTLFEKLKVPRS-KVLVL--QLNDMKE--GADIQAALYEINGQRTVPNIYI--NGK 327 (362)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHTTTCCCTT-TEEEE--EGGGSTT--HHHHHHHHHHHHCCCSSCEEEE--TTE
T ss_pred EEEEEcC--------CCcchHHHHHHHHHHcCCCcc-eEEEE--EeccccC--CHHHHHHHHHHHCCCCcCEEEE--CCE
Confidence 4556665 9999999876 4554321221 23333 3332210 0000000233468889998754 675
Q ss_pred Ee
Q 032841 110 VS 111 (132)
Q Consensus 110 ~~ 111 (132)
.+
T Consensus 328 ~I 329 (362)
T 2jad_A 328 HI 329 (362)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 299
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=96.06 E-value=0.0021 Score=41.73 Aligned_cols=29 Identities=7% Similarity=-0.008 Sum_probs=20.0
Q ss_pred CCChhH------HhhhHHHHHHHHhCCCCcEEEEEEeCCCc
Q 032841 45 SWCPDC------VRAEPVIYKTLEASPDDIALLQAYVGDRP 79 (132)
Q Consensus 45 pWC~~C------~~~~p~~~~~~~~~~~~~~~~~v~~~~~~ 79 (132)
|+||.| .++..+|.. .++.|-.+|++..+
T Consensus 8 ~~c~~c~~kk~c~~aK~lL~~------kgV~feEidI~~d~ 42 (121)
T 1u6t_A 8 SSSGSTAIKKKQQDVLGFLEA------NKIGFEEKDIAANE 42 (121)
T ss_dssp TTCSCHHHHHHHHHHHHHHHH------TTCCEEEEECTTCH
T ss_pred CCCCCccchHHHHHHHHHHHH------CCCceEEEECCCCH
Confidence 399999 455554444 36889999997644
No 300
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.98 E-value=0.0086 Score=41.09 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=32.1
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC-CCCcEEEEEEeC
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS-PDDIALLQAYVG 76 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~-~~~~~~~~v~~~ 76 (132)
..+.+++.|.- .-||+|+++.+.+..+.+++ +++++++.-+..
T Consensus 13 ~a~vtiv~f~D--------~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLE--------PTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEEC--------TTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECC
T ss_pred CCCEEEEEEEC--------CCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcC
Confidence 34455555544 49999999999998877765 678998888863
No 301
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.83 E-value=0.014 Score=41.62 Aligned_cols=47 Identities=13% Similarity=0.009 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHhCCCC---cEEEEEEeCCCcCccCCCCCccccccccc----cccceEEEEeC
Q 032841 52 RAEPVIYKTLEASPDD---IALLQAYVGDRPTWRNPQHPFRVNSRFKL----TGVPTLFRWEN 107 (132)
Q Consensus 52 ~~~p~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~v----~~vPt~~~~~~ 107 (132)
.....+.++++++.++ +.|+.+|.+... . ....||+ ..+|.+++++.
T Consensus 150 ~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~---~------~~~~fgl~~~~~~~P~v~i~~~ 203 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFS---H------ELSDFGLESTAGEIPVVAIRTA 203 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTH---H------HHGGGTCCCCSCSSCEEEEECT
T ss_pred HHHHHHHHHHHHccccCceEEEEEEchHHHH---H------HHHHcCCCCccCCCCEEEEEeC
Confidence 4677788888887644 999999976543 2 4567888 36999999864
No 302
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.093 Score=38.49 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccc-cc-------------cccceEEEEeC-CeEeEEecCc
Q 032841 53 AEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF-KL-------------TGVPTLFRWEN-DIVSGRLEDH 117 (132)
Q Consensus 53 ~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~v-------------~~vPt~~~~~~-g~~~~~~~~~ 117 (132)
..+.+..++..+.+.+.|+.++-.+.....+ ... +..+| +| ...|++++|++ ++....+.|
T Consensus 175 ~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~-~~~--~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g- 250 (298)
T 3ed3_A 175 ISPVYKSIALDWLGKFDFYSISNKKLKQLTD-MNP--TYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEG- 250 (298)
T ss_dssp CCHHHHHHHHHTBTTEEEEEEEGGGCCCCCT-TCT--TSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCC-
T ss_pred chHHHHHHHHHhhcCcEEEEEcchHhhhhhh-hhh--hcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEecc-
Confidence 3578999999988789999998544221000 000 11122 34 67999999986 333334544
Q ss_pred chhcHHHHHHhhh
Q 032841 118 EAHLEHKIKALLS 130 (132)
Q Consensus 118 ~~~~~~~l~~~l~ 130 (132)
+....+.|.+||.
T Consensus 251 ~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 251 NSINKNDISKFLR 263 (298)
T ss_dssp SSCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHH
Confidence 4567888999987
No 303
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=95.50 E-value=0.11 Score=36.87 Aligned_cols=87 Identities=7% Similarity=0.032 Sum_probs=54.8
Q ss_pred CCCeEEEEEEeeCCCCCCCCCC---hh-HHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccc--c
Q 032841 26 KNKANFILFLADKDPSTSLSWC---PD-CVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTG--V 99 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC---~~-C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~--v 99 (132)
.++++++.|+..+ ++ +. .......+.++++++. ++.|+.+|.++.. . ....||+.. .
T Consensus 131 ~~~~l~~~~~~~d-------~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~---~------~l~~fgl~~~~~ 193 (250)
T 3ec3_A 131 SKRPLVVVYYSVD-------FSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYA---T------EVKDLGLSESGG 193 (250)
T ss_dssp CSSSEEEEEECCC-------CSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTH---H------HHHHTTCSSCSC
T ss_pred ccCccEEEEEecc-------cccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHH---H------HHHHcCCCccCC
Confidence 3567777776531 33 33 3457888999999998 8999999876543 2 335678763 4
Q ss_pred -ceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 100 -PTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 100 -Pt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
|.+++++.++....+. .+..+.+.|++|++
T Consensus 194 ~p~~~~~~~~~~ky~~~-~~~~t~~~i~~Fv~ 224 (250)
T 3ec3_A 194 DVNAAILDESGKKFAME-PEEFDSDALREFVM 224 (250)
T ss_dssp SCEEEEECTTSCEEECC-CCSCCHHHHHHHHH
T ss_pred CcEEEEEcCCCceecCC-cccCCHHHHHHHHH
Confidence 4677666433222232 13456777888875
No 304
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=95.50 E-value=0.022 Score=40.34 Aligned_cols=42 Identities=12% Similarity=0.061 Sum_probs=31.1
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHH-HHHHHhC--CCCcEEEEEEeC
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVI-YKTLEAS--PDDIALLQAYVG 76 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~-~~~~~~~--~~~~~~~~v~~~ 76 (132)
++..++.|+.- .||+|+++.|.+ ..+.+++ +++++++..++.
T Consensus 39 A~vtIvef~Dy--------~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 39 APILMIEYASL--------TCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp CSEEEEEEECT--------TCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCEEEEEEECC--------CCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 45566666664 999999999964 6777676 357888888764
No 305
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.41 E-value=0.049 Score=38.41 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=26.8
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++++|+|+++||++++..++...++... ....+.+..+|+
T Consensus 197 l~~~f~v~~~Pslvl~~~~g~~~~~~~~-~~~r~~~~~~l~ 236 (244)
T 3q6o_A 197 VVRKFGVTDFPSCYLLFRNGSVSRVPVL-MESRSFYTAYLQ 236 (244)
T ss_dssp HHHHHTCCCSSEEEEEETTSCEEECCCS-SSSHHHHHHHHH
T ss_pred HHHHcCCCCCCeEEEEeCCCCeEeeccc-cccHHHHHHHHH
Confidence 7789999999999998865544444422 234455666554
No 306
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=95.25 E-value=0.051 Score=37.90 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHH-hC--CCCcEEEEEEe
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLE-AS--PDDIALLQAYV 75 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~-~~--~~~~~~~~v~~ 75 (132)
..+.++|.|.- .-||.|+++.+.+....+ +| .++++++..++
T Consensus 14 ~a~vtivef~D--------~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVS--------YTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEEC--------TTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEEC--------CCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 34556666655 489999999998877665 67 46888888876
No 307
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=94.91 E-value=0.07 Score=35.97 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=30.1
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHH-HHHHhCC--CCcEEEEEEeC
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIY-KTLEASP--DDIALLQAYVG 76 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~-~~~~~~~--~~~~~~~v~~~ 76 (132)
++..++.|+- +-||+|..+.+.+. .+.+++. +++.++...+.
T Consensus 11 a~~~i~~f~D--------~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 11 GKPLVVVYGD--------YKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp CCCEEEEEEC--------TTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCeEEEEEEC--------CCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 4455555555 59999999999984 5666775 46888777754
No 308
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=94.52 E-value=0.023 Score=38.71 Aligned_cols=85 Identities=8% Similarity=0.181 Sum_probs=55.2
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC-CCcE-EEEEEeCCCc---CccCC-C--CCcc--------
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP-DDIA-LLQAYVGDRP---TWRNP-Q--HPFR-------- 89 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~-~~~~-~~~v~~~~~~---~~~~~-~--~~~~-------- 89 (132)
.++.++|+||=. .|||.|....+.+.+.+.++. .++. ++.|+++... .|... . .+|.
T Consensus 41 ~gk~vVL~fyP~-------~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLSD~~~~ 113 (171)
T 2xhf_A 41 RGRKGILFSVVG-------AFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLADMHGE 113 (171)
T ss_dssp TTSEEEEEECSC-------TTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEECTTSH
T ss_pred CCCeEEEEEECC-------CCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEEeCCch
Confidence 577888888876 499999999999999877664 4674 8888887642 23210 1 1232
Q ss_pred cccccccc-----------ccceEEEEeCCeEeEEecCc
Q 032841 90 VNSRFKLT-----------GVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 90 ~~~~~~v~-----------~vPt~~~~~~g~~~~~~~~~ 117 (132)
+++.||+. ..-..+++++|.........
T Consensus 114 ~a~ayGv~~~~~~~g~g~~~~R~tfvIddG~V~~~~v~~ 152 (171)
T 2xhf_A 114 FTRALGTELDSSKMLGNNRSRRYAMLIDDNKIRSVSTEP 152 (171)
T ss_dssp HHHHHTCBCCCHHHHSSCCBCCEEEEEETTEEEEEEETT
T ss_pred HHHHhCCceeccccCCCcceEEEEEEEeCCEEEEEEEeC
Confidence 24456653 23445666888876666554
No 309
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=94.24 E-value=0.037 Score=38.16 Aligned_cols=28 Identities=11% Similarity=0.037 Sum_probs=22.5
Q ss_pred cccccccccceEEEEeCCeEeEEecCcc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHE 118 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~ 118 (132)
+.++||.|+||++++.+|+.+..+.|..
T Consensus 169 a~~~gv~g~Pt~~i~~~G~~~~~~~G~~ 196 (216)
T 2in3_A 169 VAQWGISGFPALVVESGTDRYLITTGYR 196 (216)
T ss_dssp HHHTTCCSSSEEEEEETTEEEEEESSCC
T ss_pred HHHcCCcccceEEEEECCEEEEeccCCC
Confidence 4678999999999998998655677763
No 310
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.85 E-value=0.031 Score=44.71 Aligned_cols=61 Identities=21% Similarity=0.345 Sum_probs=37.1
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc---CccCCCCCccccccccccccceEEEEeC
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP---TWRNPQHPFRVNSRFKLTGVPTLFRWEN 107 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~~~~~~~~v~~vPt~~~~~~ 107 (132)
++.|+.+ |||.|++++..|.+. ++.+-.+|++... ++++ .+....+..++|.+ |-+
T Consensus 20 v~vy~~~--------~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~-----~l~~~~g~~tvP~v--~i~ 78 (598)
T 2x8g_A 20 VILFSKT--------TCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQK-----CLASFSKIETVPQM--FVR 78 (598)
T ss_dssp EEEEECT--------TCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHH-----HTHHHHSCCCSCEE--EET
T ss_pred EEEEECC--------CChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHH-----HHHHHhCCceeCEE--EEC
Confidence 4566665 999999999988864 2334456665432 1111 02224677889987 346
Q ss_pred CeEeE
Q 032841 108 DIVSG 112 (132)
Q Consensus 108 g~~~~ 112 (132)
|+.++
T Consensus 79 g~~ig 83 (598)
T 2x8g_A 79 GKFIG 83 (598)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 65443
No 311
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.80 E-value=0.086 Score=34.10 Aligned_cols=28 Identities=14% Similarity=0.384 Sum_probs=21.7
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR 78 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~ 78 (132)
|||+.|++....+.+. ++.+-.+|+...
T Consensus 9 ~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 9 PSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp TTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred CCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5999999999988873 456667787654
No 312
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.68 E-value=0.08 Score=33.78 Aligned_cols=29 Identities=17% Similarity=0.466 Sum_probs=22.3
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP 79 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~ 79 (132)
|+|+.|++....+++. ++.+-.+|+...+
T Consensus 8 ~~C~~c~ka~~~L~~~------gi~~~~~di~~~~ 36 (120)
T 3l78_A 8 PSCTSCRKARAWLNRH------DVVFQEHNIMTSP 36 (120)
T ss_dssp SSCHHHHHHHHHHHHT------TCCEEEEETTTSC
T ss_pred CCCHHHHHHHHHHHHc------CCCeEEEecccCC
Confidence 6999999999888763 4667778886543
No 313
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=93.36 E-value=0.49 Score=29.62 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=54.6
Q ss_pred CChhHHhhhHHHHHHHHh-C-CCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeEeEEecCcchhcHH
Q 032841 46 WCPDCVRAEPVIYKTLEA-S-PDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEH 123 (132)
Q Consensus 46 WC~~C~~~~p~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~ 123 (132)
--+..++....+.++.+. . +..+.+=.||+.+.++ +++.++|-.+||++.... ....|+.|.+.. +
T Consensus 21 ~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPe---------LAE~~~IvATPTLIK~~P-~P~rriiGd~i~--~ 88 (105)
T 1t4y_A 21 TRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQ---------LVEYYRLVVTPALVKIGP-GSRQVLSGIDLT--D 88 (105)
T ss_dssp SCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHH---------HHHHTTCCSSSEEEEEES-SSCEEEESSCHH--H
T ss_pred CCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHH---------HHhHcCeeeccHhhccCC-CCceEEeChHHH--H
Confidence 688899988888887765 4 4578888889888662 888999999999999876 456788898643 2
Q ss_pred HHHHh
Q 032841 124 KIKAL 128 (132)
Q Consensus 124 ~l~~~ 128 (132)
.++.|
T Consensus 89 ql~~w 93 (105)
T 1t4y_A 89 QLANQ 93 (105)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45544
No 314
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=93.07 E-value=0.32 Score=38.64 Aligned_cols=79 Identities=10% Similarity=0.046 Sum_probs=44.7
Q ss_pred CCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC--CCcEEEEEEeCCCcCccCCCCCccccccccccccceEE
Q 032841 26 KNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP--DDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLF 103 (132)
Q Consensus 26 ~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~ 103 (132)
..++++|.|... - .+...++...+. ..+.+..+.-.+.. ++++|||+++||++
T Consensus 156 ~~~~vallF~~~--------~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~----------l~~kfgV~~~Pslv 210 (519)
T 3t58_A 156 KADYLALVFERE--------D-------SYLGREVTLDLSQYHAVAVRRVLNTESD----------LVNKFGVTDFPSCY 210 (519)
T ss_dssp CCSEEEEEEECT--------T-------CCHHHHHHHHTTTCTTEEEEEEETTCHH----------HHHHHTCCCSSEEE
T ss_pred CCCeEEEEecCC--------c-------hHHHHHHHHHhhccCCeeEEEecCchHH----------HHHHcCCCCCCeEE
Confidence 456777777654 1 123344444443 34665444432222 77899999999999
Q ss_pred EEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 104 RWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+++.++...++.... ...+.+..+|.
T Consensus 211 l~~~nGk~~~~~v~~-~~r~~~~~~l~ 236 (519)
T 3t58_A 211 LLLRNGSVSRVPVLV-ESRSFYTSYLR 236 (519)
T ss_dssp EEETTSCEEECCCSS-CSHHHHHHHHT
T ss_pred EEeCCCceeeccccc-ccHHHHHHHHH
Confidence 998765555553332 12334445443
No 315
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=92.89 E-value=0.19 Score=32.04 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=22.5
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP 79 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~ 79 (132)
|+|+.|++....+++- ++.+-.+|+...+
T Consensus 11 ~~C~~c~ka~~~L~~~------gi~~~~~di~~~~ 39 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDL------AWDYDAIDIKKNP 39 (120)
T ss_dssp SSCHHHHHHHHHHHHH------TCCEEEEETTTSC
T ss_pred CCChHHHHHHHHHHHc------CCceEEEEeccCc
Confidence 6999999999988864 4667778876543
No 316
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=92.69 E-value=0.1 Score=38.25 Aligned_cols=37 Identities=11% Similarity=0.374 Sum_probs=26.7
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEE
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQA 73 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v 73 (132)
++.+++.|+- |.||+|+++.+.+.+..+. .+++++.+
T Consensus 147 gk~~I~vFtD--------p~CPYCkkl~~~l~~~l~~--~~Vr~i~~ 183 (273)
T 3tdg_A 147 KDKILYIVSD--------PMCPHCQKELTKLRDHLKE--NTVRMVVV 183 (273)
T ss_dssp TTCEEEEEEC--------TTCHHHHHHHHTHHHHHHH--CEEEEEEC
T ss_pred CCeEEEEEEC--------cCChhHHHHHHHHHHHhhC--CcEEEEEe
Confidence 5677777766 4999999999999976654 24554443
No 317
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.68 E-value=0.16 Score=32.23 Aligned_cols=26 Identities=12% Similarity=-0.005 Sum_probs=20.2
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
|||+.|++....+++. ++.+-.+|+.
T Consensus 13 ~~C~~C~ka~~~L~~~------gi~y~~~di~ 38 (120)
T 2kok_A 13 KNCDTMKKARIWLEDH------GIDYTFHDYK 38 (120)
T ss_dssp SSCHHHHHHHHHHHHH------TCCEEEEEHH
T ss_pred CCChHHHHHHHHHHHc------CCcEEEEeee
Confidence 5999999999988874 4556667764
No 318
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=92.42 E-value=0.11 Score=32.76 Aligned_cols=27 Identities=11% Similarity=0.026 Sum_probs=20.8
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~ 77 (132)
|||+.|++....|.+. ++.+-.+|+..
T Consensus 8 ~~C~~C~kak~~L~~~------gi~~~~~di~~ 34 (114)
T 1rw1_A 8 KACDTMKKARTWLDEH------KVAYDFHDYKA 34 (114)
T ss_dssp SSCHHHHHHHHHHHHT------TCCEEEEEHHH
T ss_pred CCChHHHHHHHHHHHC------CCceEEEeecC
Confidence 5999999999888773 46677777753
No 319
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=91.20 E-value=0.22 Score=31.70 Aligned_cols=29 Identities=17% Similarity=0.391 Sum_probs=21.8
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRP 79 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~ 79 (132)
|+|+.|++....|++- ++.+-.+|+...+
T Consensus 12 p~C~~c~ka~~~L~~~------gi~~~~~di~~~~ 40 (120)
T 3gkx_A 12 PACSTCQKAKKWLIEN------NIEYTNRLIVDDN 40 (120)
T ss_dssp TTCHHHHHHHHHHHHT------TCCCEEEETTTTC
T ss_pred CCChHHHHHHHHHHHc------CCceEEEecccCc
Confidence 6999999999888763 4566677876543
No 320
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=89.11 E-value=0.22 Score=32.99 Aligned_cols=34 Identities=12% Similarity=0.267 Sum_probs=23.4
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
++.++||.|+||+++ +|+ .+.|.. ..+.+++.|+
T Consensus 141 ~a~~~gv~gtPt~vv--ng~---~~~G~~--~~~~l~~~i~ 174 (175)
T 1z6m_A 141 EANAAHIQFVPTIII--GEY---IFDESV--TEEELRGYIE 174 (175)
T ss_dssp HHHHHTCCSSCEEEE--TTE---EECTTC--CHHHHHHHHT
T ss_pred HHHHcCCCCcCeEEE--CCE---EccCCC--CHHHHHHHhc
Confidence 467899999999766 675 345542 3556777665
No 321
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=87.76 E-value=0.36 Score=32.39 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=22.2
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
.+.++||.|+||+++ +|+ .+.|. ...+.+.++|+
T Consensus 141 ~a~~~gv~GtPt~vv--nG~---~~~G~--~~~~~l~~~i~ 174 (186)
T 3bci_A 141 IAKDNHIKTTPTAFI--NGE---KVEDP--YDYESYEKLLK 174 (186)
T ss_dssp HHHHTTCCSSSEEEE--TTE---ECSCT--TCHHHHHHHHH
T ss_pred HHHHcCCCCCCeEEE--CCE---EcCCC--CCHHHHHHHHH
Confidence 456799999999987 775 34454 23445555554
No 322
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=87.36 E-value=0.34 Score=31.76 Aligned_cols=28 Identities=4% Similarity=-0.142 Sum_probs=21.2
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR 78 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~ 78 (132)
|+|+.|++....|.+- ++.+-.+|+...
T Consensus 10 p~C~~crkak~~L~~~------gi~~~~idi~~~ 37 (141)
T 1s3c_A 10 PASGTSRNTLEMIRNS------GTEPTIILYLEN 37 (141)
T ss_dssp TTCHHHHHHHHHHHHT------TCCCEEECTTTS
T ss_pred CCChHHHHHHHHHHHc------CCCEEEEECCCC
Confidence 6999999999888763 455666777653
No 323
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=87.03 E-value=1.2 Score=30.36 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=26.8
Q ss_pred EEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEe
Q 032841 31 FILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYV 75 (132)
Q Consensus 31 ~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~ 75 (132)
-|.+|.+ +-||.|....+.+.++.+....++.+.....
T Consensus 9 ~I~~f~D-------~~CP~C~~~~~~~~~l~~~~~~~v~v~~~~~ 46 (216)
T 2in3_A 9 VLWYIAD-------PMCSWCWGFAPVIENIRQEYSAFLTVKIMPG 46 (216)
T ss_dssp EEEEEEC-------TTCHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred eEEEEEC-------CCCchhhcchHHHHHHHhcCCCCeEEEEeec
Confidence 4556666 6999999999999998773333566665544
No 324
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=86.96 E-value=1.6 Score=27.88 Aligned_cols=38 Identities=16% Similarity=0.348 Sum_probs=28.3
Q ss_pred CeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC
Q 032841 28 KANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 28 ~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~ 77 (132)
|.+++.|.- |-|+-|+.....+.+ +.++..++.||+=+
T Consensus 2 K~tLILfGK--------P~C~vCe~~s~~l~~----ledeY~ilrVNIlS 39 (124)
T 2g2q_A 2 KNVLIIFGK--------PYCSICENVSDAVEE----LKSEYDILHVDILS 39 (124)
T ss_dssp CEEEEEEEC--------TTCHHHHHHHHHHHT----TTTTEEEEEEECCC
T ss_pred CceEEEeCC--------CccHHHHHHHHHHHH----hhccccEEEEEeee
Confidence 456788844 699999998887744 44567799999743
No 325
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=86.84 E-value=0.26 Score=33.44 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=22.5
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcc--hhcHHHHHHhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHE--AHLEHKIKALL 129 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~--~~~~~~l~~~l 129 (132)
.+.++||.|+||+++ +|+.+-...|.. ....+.|++++
T Consensus 144 ~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 144 LSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHHHHHHHH
Confidence 356899999999987 665332224542 23344455444
No 326
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=86.22 E-value=0.37 Score=32.91 Aligned_cols=20 Identities=30% Similarity=0.584 Sum_probs=15.6
Q ss_pred ccccccccccceEEEEeCCeEe
Q 032841 90 VNSRFKLTGVPTLFRWENDIVS 111 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~ 111 (132)
.+.++||.|+||+++ +|+..
T Consensus 143 ~a~~~gv~gtPtfvv--nG~~~ 162 (191)
T 3l9s_A 143 AAADLQLQGVPAMFV--NGKYQ 162 (191)
T ss_dssp HHHHTTCCSSSEEEE--TTTEE
T ss_pred HHHHhCCcccCEEEE--CCEEE
Confidence 356899999999987 66543
No 327
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=86.10 E-value=0.45 Score=30.18 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=19.6
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~ 77 (132)
|+|+.|++....+++- ++.+-.+|+..
T Consensus 12 p~C~~c~ka~~~L~~~------gi~~~~~di~~ 38 (119)
T 3f0i_A 12 PKCSKSRETLALLENQ------GIAPQVIKYLE 38 (119)
T ss_dssp TTCHHHHHHHHHHHHT------TCCCEEECHHH
T ss_pred CCChHHHHHHHHHHHc------CCceEEEEecc
Confidence 6999999999888762 34455566543
No 328
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=85.88 E-value=0.37 Score=30.72 Aligned_cols=28 Identities=7% Similarity=0.096 Sum_probs=20.6
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDR 78 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~ 78 (132)
|+|+.|++....+++- ++.+-.+|+...
T Consensus 13 p~C~~c~ka~~~L~~~------gi~~~~~di~~~ 40 (121)
T 3rdw_A 13 PRCSKSRETLALVEQQ------GITPQVVLYLET 40 (121)
T ss_dssp TTCHHHHHHHHHHHTT------TCCCEEECTTTS
T ss_pred CCCHHHHHHHHHHHHc------CCCcEEEeeccC
Confidence 6999999999887752 455666777553
No 329
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=85.44 E-value=0.35 Score=32.54 Aligned_cols=18 Identities=11% Similarity=0.451 Sum_probs=13.8
Q ss_pred ccccccccccceEEEEeCCe
Q 032841 90 VNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|+||+++ +|+
T Consensus 142 ~a~~~gv~gtPt~vi--ng~ 159 (195)
T 2znm_A 142 LTEQYRIDSTPTVIV--GGK 159 (195)
T ss_dssp HHHHTTCCSSSEEEE--TTT
T ss_pred HHHHcCCCCCCeEEE--CCE
Confidence 456899999999655 564
No 330
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=84.77 E-value=0.41 Score=32.54 Aligned_cols=19 Identities=26% Similarity=0.558 Sum_probs=14.9
Q ss_pred ccccccccccceEEEEeCCeE
Q 032841 90 VNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~ 110 (132)
.+.++||.|+||+++ +|+.
T Consensus 146 ~a~~~gv~gtPt~vv--ng~~ 164 (193)
T 3hz8_A 146 LTETFQIDGVPTVIV--GGKY 164 (193)
T ss_dssp HHHHTTCCSSSEEEE--TTTE
T ss_pred HHHHhCCCcCCEEEE--CCEE
Confidence 356899999999987 6643
No 331
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=83.66 E-value=0.42 Score=32.01 Aligned_cols=18 Identities=22% Similarity=0.349 Sum_probs=13.7
Q ss_pred ccccccccccceEEEEeCCe
Q 032841 90 VNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|+||+++ +|+
T Consensus 147 ~a~~~gv~gtPt~vi--ng~ 164 (193)
T 2rem_A 147 YALKVRPVGTPTIVV--NGR 164 (193)
T ss_dssp HHHHHCCSSSSEEEE--TTT
T ss_pred HHHHhCCCCCCeEEE--CCE
Confidence 356799999999655 564
No 332
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=83.12 E-value=1.4 Score=27.53 Aligned_cols=64 Identities=27% Similarity=0.263 Sum_probs=49.3
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhC-CCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEE
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEAS-PDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRW 105 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~ 105 (132)
...++..|.|+ --|-.++....+.++.+.+ ++...+=.||+.+.+ . ++..++|-.+||++..
T Consensus 6 ~~~~L~LyVaG--------~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~P-----e----lAe~~~IvAtPTLiK~ 68 (105)
T 1wwj_A 6 KTYVLKLYVAG--------NTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNP-----Q----LAEEDKILATPTLAKI 68 (105)
T ss_dssp EEEEEEEEESS--------CCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC-----S----CCTTCEEECHHHHGGG
T ss_pred CceEEEEEEeC--------CCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccCH-----h----HHhHCCeEEechhhhc
Confidence 34566777776 6888898888888877653 567888888988766 2 7889999999999875
Q ss_pred eC
Q 032841 106 EN 107 (132)
Q Consensus 106 ~~ 107 (132)
..
T Consensus 69 ~P 70 (105)
T 1wwj_A 69 LP 70 (105)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 333
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=82.62 E-value=0.75 Score=31.59 Aligned_cols=18 Identities=28% Similarity=0.678 Sum_probs=14.8
Q ss_pred ccccccccccceEEEEeCCe
Q 032841 90 VNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|+||+++ +|+
T Consensus 155 ~a~~~gV~gtPtfvv--nG~ 172 (202)
T 3gha_A 155 LNQKMNIQATPTIYV--NDK 172 (202)
T ss_dssp HHHHTTCCSSCEEEE--TTE
T ss_pred HHHHcCCCcCCEEEE--CCE
Confidence 356799999999988 774
No 334
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=81.82 E-value=1 Score=30.78 Aligned_cols=34 Identities=9% Similarity=0.114 Sum_probs=23.6
Q ss_pred cccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhhc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
+.++||.|+||+++ +|+ .+.|.+. .+.+.++|..
T Consensus 166 a~~~Gv~GvPtfvv--~g~---~~~G~~~--~~~l~~~l~~ 199 (202)
T 3fz5_A 166 AVARGIFGSPFFLV--DDE---PFWGWDR--MEMMAEWIRT 199 (202)
T ss_dssp HHHTTCCSSSEEEE--TTE---EEESGGG--HHHHHHHHHT
T ss_pred HHHCCCCcCCEEEE--CCE---EEecCCC--HHHHHHHHhc
Confidence 45789999999988 664 5667543 3466666653
No 335
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=81.64 E-value=0.84 Score=31.06 Aligned_cols=27 Identities=19% Similarity=0.071 Sum_probs=21.9
Q ss_pred EEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC
Q 032841 32 ILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP 65 (132)
Q Consensus 32 v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~ 65 (132)
|.||.+ +-||.|-...+.++++.+.++
T Consensus 3 I~~~~D-------~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 3 VDFYFD-------FLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEEC-------TTCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEe-------CCCHHHHHHHHHHHHHHHHcC
Confidence 556666 689999999999999888775
No 336
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=81.24 E-value=0.55 Score=31.36 Aligned_cols=18 Identities=28% Similarity=0.333 Sum_probs=14.0
Q ss_pred ccccccccccceEEEEeCCe
Q 032841 90 VNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|+||+++ +|+
T Consensus 154 ~a~~~gv~gtPt~~i--ng~ 171 (195)
T 3c7m_A 154 SYDVAKIQGVPAYVV--NGK 171 (195)
T ss_dssp HHHHHHHHCSSEEEE--TTT
T ss_pred HHHHcCCCccCEEEE--CCE
Confidence 456789999999766 664
No 337
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=79.72 E-value=0.56 Score=31.85 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=21.9
Q ss_pred ccccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhh
Q 032841 90 VNSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALL 129 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l 129 (132)
.+.++||.|+||+++ +|+.+..+.| ....+...++|
T Consensus 146 ~a~~~GV~gtPtf~i--ng~~~~~~s~--~~~~e~w~~~l 181 (182)
T 3gn3_A 146 YARQNGIHVSPTFMI--NGLVQPGMSS--GDPVSKWVSDI 181 (182)
T ss_dssp HHHHHTCCSSSEEEE--TTEECTTCCT--TSCHHHHHHHH
T ss_pred HHHHCCCCccCEEEE--CCEEccCCCC--CCCHHHHHHHh
Confidence 356789999999987 7754322222 34444555544
No 338
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=77.82 E-value=0.98 Score=31.22 Aligned_cols=21 Identities=19% Similarity=0.578 Sum_probs=16.3
Q ss_pred ccccccccceEEEEeCCeEeEEecCc
Q 032841 92 SRFKLTGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 92 ~~~~v~~vPt~~~~~~g~~~~~~~~~ 117 (132)
.++||.|+||+++ +|+ .+.|.
T Consensus 162 ~~~GV~GtPtfvv--ng~---~~~G~ 182 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI---LLAGT 182 (205)
T ss_dssp HHHCCCSSSEEEE--TTE---ECTTC
T ss_pred HHcCCccCCEEEE--CCE---EEeCC
Confidence 6799999999987 674 35554
No 339
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A
Probab=76.26 E-value=7 Score=27.19 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=35.5
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWEND 108 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g 108 (132)
.+-|+.-|+. .+...++||.|++..=.+.... . .+.++.|+....+. .|. +......+|++.. +|
T Consensus 25 ~i~l~~ka~~-~~~s~~~sP~~~rv~~~L~~~g--i--~ye~~~v~~~~~~~------~~~--~~nP~g~VPvL~~--dg 89 (250)
T 3fy7_A 25 KLQLFVKASE-DGESVGHCPSCQRLFMVLLLKG--V--PFTLTTVDTRRSPD------VLK--DFAPGSQLPILLY--DS 89 (250)
T ss_dssp CEEEEEEBCT-TSSSBCSCHHHHHHHHHHHHHT--C--CCEEEEEC----------------------CCSCEEEE--TT
T ss_pred CceEEEEeCC-CCCCCCCChHHHHHHHHHHHcC--C--ccEEEECCCccChH------HHH--hhCCCCCCCEEEE--CC
Confidence 3445555554 4567789999999988887753 2 35566666543221 111 1223447999874 55
Q ss_pred e
Q 032841 109 I 109 (132)
Q Consensus 109 ~ 109 (132)
.
T Consensus 90 ~ 90 (250)
T 3fy7_A 90 D 90 (250)
T ss_dssp E
T ss_pred E
Confidence 3
No 340
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=75.58 E-value=2.7 Score=28.47 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=17.3
Q ss_pred cccccccccceEEEEeCCeEeEEecCcc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHE 118 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~ 118 (132)
+.++||.|+||+++ +|+ .+.|..
T Consensus 160 a~~~Gv~G~Ptfvi--~g~---~~~G~~ 182 (203)
T 2imf_A 160 AIERKVFGVPTMFL--GDE---MWWGND 182 (203)
T ss_dssp HHHTTCCSSSEEEE--TTE---EEESGG
T ss_pred HHHCCCCcCCEEEE--CCE---EEECCC
Confidence 46789999999987 674 456653
No 341
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=73.38 E-value=3 Score=28.82 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=23.0
Q ss_pred cccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+.++||.|+||+++=.+|+ -..+.|.+. .+.+.+.|.
T Consensus 175 a~~~gv~G~Ptfvv~~~g~-~~~~~G~~~--~~~l~~~l~ 211 (226)
T 1r4w_A 175 ACKYGAFGLPTTVAHVDGK-TYMLFGSDR--MELLAYLLG 211 (226)
T ss_dssp HHHTTCCSSCEEEEEETTE-EEEEESTTC--HHHHHHHHT
T ss_pred HHHCCCCCCCEEEEeCCCC-cCceeCCCc--HHHHHHHhc
Confidence 4568999999997755553 124556543 345555554
No 342
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=72.11 E-value=0.9 Score=30.71 Aligned_cols=18 Identities=11% Similarity=0.434 Sum_probs=14.5
Q ss_pred ccccccccccceEEEEeCCe
Q 032841 90 VNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 90 ~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|+||+++ +|+
T Consensus 137 ~a~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 137 LFKEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHHTTCCSSSEEEE--TTT
T ss_pred HHHHhCCCccCEEEE--CCE
Confidence 356799999999987 564
No 343
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=71.62 E-value=2.7 Score=29.54 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=16.2
Q ss_pred cccccccccceEEEEeCCeEeEEecCc
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~ 117 (132)
+.++||.|+||+++ +|+ ..+.|.
T Consensus 176 a~~~Gv~GvPtfvv--~g~--~~v~Ga 198 (239)
T 3gl5_A 176 AAQLGATGVPFFVL--DRA--YGVSGA 198 (239)
T ss_dssp HHHTTCCSSSEEEE--TTT--EEEESS
T ss_pred HHHCCCCeeCeEEE--CCc--EeecCC
Confidence 45789999999987 553 234554
No 344
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=70.68 E-value=2.5 Score=29.65 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=23.2
Q ss_pred cccccccccceEEEEeCCeEeEEecCcchhcHHHHHHhhh
Q 032841 91 NSRFKLTGVPTLFRWENDIVSGRLEDHEAHLEHKIKALLS 130 (132)
Q Consensus 91 ~~~~~v~~vPt~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 130 (132)
+.++||.|+||+++=.+|+. ..+-|.+.. +.|.++|.
T Consensus 175 a~~~Gv~GvPtfvv~~~g~~-~~f~G~drl--~~l~~~L~ 211 (234)
T 3rpp_A 175 ACRYGAFGLPITVAHVDGQT-HMLFGSDRM--ELLAHLLG 211 (234)
T ss_dssp HHHTTCSSSCEEEEEETTEE-EEEESSSCH--HHHHHHHT
T ss_pred HHHcCCCCCCEEEEeCCCCc-CceeCccCH--HHHHHHhc
Confidence 45689999999987325641 245665543 34666664
No 345
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=65.86 E-value=5.9 Score=27.25 Aligned_cols=29 Identities=10% Similarity=0.018 Sum_probs=23.7
Q ss_pred EEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC
Q 032841 30 NFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP 65 (132)
Q Consensus 30 v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~ 65 (132)
+-|.||.+ +-||.|-...+.++++.+.+.
T Consensus 6 ~~I~~~~D-------~~CP~Cy~~~~~l~~l~~~~~ 34 (226)
T 1r4w_A 6 RVLELFYD-------VLSPYSWLGFEVLCRYQHLWN 34 (226)
T ss_dssp EEEEEEEC-------TTCHHHHHHHHHHHHHTTTSS
T ss_pred ceEEEEEe-------CCChHHHHHHHHHHHHHHHcC
Confidence 44677777 699999999999999877663
No 346
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=65.78 E-value=5.2 Score=27.41 Aligned_cols=32 Identities=6% Similarity=0.029 Sum_probs=21.5
Q ss_pred CCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEe
Q 032841 40 PSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYV 75 (132)
Q Consensus 40 ~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~ 75 (132)
+.-|.||||.|++.+-.|... .. ....+.|+.
T Consensus 15 ~~~~~~~SP~~~kvr~~L~~k--gi--~y~~~~v~~ 46 (253)
T 4f03_A 15 RIKHSPWSPNTWKIRYALNYK--GL--KYKTEWVEY 46 (253)
T ss_dssp GGTTCCCCHHHHHHHHHHHHH--TC--CEEEEECCG
T ss_pred CCCCCCcChhHHHHHHHHHHc--CC--CCEEEEEcc
Confidence 334678999999998877653 22 245555654
No 347
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=65.09 E-value=2.8 Score=25.24 Aligned_cols=35 Identities=9% Similarity=0.044 Sum_probs=27.1
Q ss_pred CCccccccccchHHHHHHHhhhCCCCCeEEEEEEee
Q 032841 2 PLNLSDATVSSFDNVFDKFKSEAPKNKANFILFLAD 37 (132)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~F~a~ 37 (132)
|.++....+.+|++. +.+...+.++++|+|+|-.-
T Consensus 4 ~~~Ivv~~P~sy~Da-~~I~d~Lr~~~~VvvNL~~l 38 (87)
T 3p04_A 4 QSTIVPVELHSFEDA-QVIGGAFRDGDAVVFDMSLL 38 (87)
T ss_dssp CCSCEEEECSSGGGH-HHHHHHHHTTCCEEEECTTS
T ss_pred CcEEEEEecCcHHHH-HHHHHHHHCCCEEEEECCCC
Confidence 566777888899987 44666666899999999653
No 348
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=64.44 E-value=4 Score=27.43 Aligned_cols=52 Identities=25% Similarity=0.342 Sum_probs=29.2
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
+.||.|++.+=.+.... . ....+.||....++| |. +..-...||++. ++|..
T Consensus 10 ~~sP~~~rvr~~L~e~g--i--~~e~~~v~~~~~~~~------~~--~~nP~g~vPvL~--~~~~~ 61 (210)
T 4hoj_A 10 ITCPFSHRCRFVLYEKG--M--DFEIKDIDIYNKPED------LA--VMNPYNQVPVLV--ERDLV 61 (210)
T ss_dssp TTCHHHHHHHHHHHHHT--C--CCEEEECCTTSCCHH------HH--HHCTTCCSCEEE--ETTEE
T ss_pred CCChHHHHHHHHHHHcC--C--CCEEEEeCCCCCCHH------HH--HHCCCCCCcEEE--ECCEE
Confidence 59999999887666542 2 345666665433211 11 111234699886 46643
No 349
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=62.35 E-value=15 Score=25.36 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=28.7
Q ss_pred CCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 42 TSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 42 ~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
.+.++||.|++.+-.+.... . .+..+.++....+.| |. +......+|++. ++|.
T Consensus 25 ~~~~~sp~~~rv~~~L~~~g--i--~ye~~~v~~~~~~~~------~~--~~nP~g~vP~L~--~~g~ 78 (247)
T 2r4v_A 25 ESIGNCPFCQRLFMILWLKG--V--KFNVTTVDMTRKPEE------LK--DLAPGTNPPFLV--YNKE 78 (247)
T ss_dssp SSBCSCHHHHHHHHHHHHHT--C--CCEEEEECCC------------------CCSSSCEEE--ETTE
T ss_pred ccCCCChhHHHHHHHHHHcC--C--CcEEEEcCcccchHH------HH--HhCCCCCCCEEE--ECCE
Confidence 34579999999887777642 2 345556655322211 11 112234799886 4663
No 350
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=54.39 E-value=0.95 Score=20.87 Aligned_cols=11 Identities=36% Similarity=0.909 Sum_probs=9.3
Q ss_pred CChhHHhhhHH
Q 032841 46 WCPDCVRAEPV 56 (132)
Q Consensus 46 WC~~C~~~~p~ 56 (132)
-||.|+.+.|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999998874
No 351
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=52.50 E-value=22 Score=27.36 Aligned_cols=39 Identities=5% Similarity=0.109 Sum_probs=28.5
Q ss_pred cccccc-----ccceEEEEeCCeEeEEecCcch--hcHHHHHHhhh
Q 032841 92 SRFKLT-----GVPTLFRWENDIVSGRLEDHEA--HLEHKIKALLS 130 (132)
Q Consensus 92 ~~~~v~-----~vPt~~~~~~g~~~~~~~~~~~--~~~~~l~~~l~ 130 (132)
.++||. +-|..++|.+|+.+.++.+.+. ...+.|+++++
T Consensus 354 ADiGi~~~G~G~~~~~~lf~~G~~~~~v~~~~iv~~l~~~i~~~~~ 399 (406)
T 4g9p_A 354 AHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVK 399 (406)
T ss_dssp SSEEEECCCTTSCSEEEEEETTEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred cCcCcccCCCCCCCeeeEEECCEEEEecCHHHHHHHHHHHHHHHHH
Confidence 468884 6889999999999988887643 33455666654
No 352
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=50.55 E-value=15 Score=23.71 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=23.3
Q ss_pred ccceEEEEeC-CeEeEEecCcchhcHHHHHHhhhc
Q 032841 98 GVPTLFRWEN-DIVSGRLEDHEAHLEHKIKALLSA 131 (132)
Q Consensus 98 ~vPt~~~~~~-g~~~~~~~~~~~~~~~~l~~~l~~ 131 (132)
.-|++++++. |+++.++.-.. ...+.|.+||++
T Consensus 55 a~P~LvL~D~~G~e~E~I~Iek-w~~d~I~efL~e 88 (129)
T 2a2p_A 55 ADPELVLLSRNYQELERIPLSQ-MTRDEINALVQE 88 (129)
T ss_dssp CCCEEEEECSSSCCCEEEECSS-SCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCEEEEeeccc-CCHHHHHHHHHH
Confidence 4688999874 77666665543 467788898864
No 353
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=47.98 E-value=24 Score=24.74 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=20.3
Q ss_pred CCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 42 TSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 42 ~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
++.++||.|++..-.+.... . .+..+.++..
T Consensus 30 ~~~~~~p~~~rv~~~L~~~g--i--~ye~~~v~~~ 60 (267)
T 2ahe_A 30 ESIGNCPFSQRLFMILWLKG--V--VFSVTTVDLK 60 (267)
T ss_dssp SSBCSCHHHHHHHHHHHHHT--C--CCEEEEECTT
T ss_pred cCCCCCchHHHHHHHHHHcC--C--CCEEEEeCcc
Confidence 34579999998887777642 2 3455566553
No 354
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=41.23 E-value=49 Score=19.74 Aligned_cols=54 Identities=15% Similarity=0.269 Sum_probs=35.1
Q ss_pred cchHHHHHHHhhhCCCCCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC
Q 032841 11 SSFDNVFDKFKSEAPKNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~ 77 (132)
++|+.-+..+......++.+-|.|.+. ....|.+.++.+++.-.+.++..+++.
T Consensus 4 ~~~~~~~~~L~~~~~~~~lvrL~f~g~-------------~~~~PvIs~l~~~~~v~vnIL~g~I~~ 57 (98)
T 3ced_A 4 DDFETSLTELEPLEKDAYIVRLVFAGS-------------TTTEPIVSSLSTAYDIKINILEANIKN 57 (98)
T ss_dssp HHHHHHHHHTCSCCTTCEEEEEEEEEE-------------SCHHHHHHHHHHHHTCCCEEEEEEEEE
T ss_pred hhHHHHHHHhhccCCCCEEEEEEECCC-------------ccCchHHHHHHHHHCCcEEEEEEEeEE
Confidence 345544444444323455677777775 225899999999887677888777755
No 355
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=40.90 E-value=55 Score=22.32 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=30.0
Q ss_pred CCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 42 TSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 42 ~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
...++||.|++.+-.+.... . .+..+.++...... .|. +..-...||++. ++|.
T Consensus 19 ~~~~~sp~~~rv~~~L~~~g--i--~ye~~~v~~~~~~~------~~~--~~nP~g~VPvL~--~~g~ 72 (241)
T 1k0m_A 19 AKIGNCPFSQRLFMVLWLKG--V--TFNVTTVDTKRRTE------TVQ--KLCPGGELPFLL--YGTE 72 (241)
T ss_dssp SSBCSCHHHHHHHHHHHHHT--C--CCEEEEECTTSCCH------HHH--HHCTTCCSSEEE--ETTE
T ss_pred CCCCCCHHHHHHHHHHHHcC--C--ccEEEEcCCcccHH------HHH--HhCCCCCCCEEE--ECCE
Confidence 33468999998887776642 2 35556666532110 011 112234799986 5664
No 356
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=38.39 E-value=24 Score=23.63 Aligned_cols=34 Identities=15% Similarity=-0.092 Sum_probs=26.6
Q ss_pred EEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEE
Q 032841 32 ILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQ 72 (132)
Q Consensus 32 v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~ 72 (132)
|.||.+ +-||.|--..+.++++.+.+.-.+.+--
T Consensus 7 I~~~~D-------~~cPwcyi~~~~l~~~~~~~~~~v~~~p 40 (202)
T 3fz5_A 7 IEFWFD-------FSSGYAFFAAQRIEALAAELGRTVLWRP 40 (202)
T ss_dssp EEEEEC-------TTCHHHHHHHTTHHHHHHHHTCCEEEEE
T ss_pred eEEEEe-------CCCHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 678887 7999999999999999887653444433
No 357
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=35.02 E-value=94 Score=20.31 Aligned_cols=65 Identities=14% Similarity=0.245 Sum_probs=38.7
Q ss_pred CChhHHh--hhHHHHHH-HHhCCCCcEEEEEEeCCCcCccCCCCCccccccc--cc-cccceEEEEeCCeEeEEecCc
Q 032841 46 WCPDCVR--AEPVIYKT-LEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRF--KL-TGVPTLFRWENDIVSGRLEDH 117 (132)
Q Consensus 46 WC~~C~~--~~p~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~v-~~vPt~~~~~~g~~~~~~~~~ 117 (132)
-|+ |.. .+|-.... .+.-+..-+++.|-.+...+=-+ .+..| +. -+-|++.+|++|+.+..+.-+
T Consensus 55 VCG-CAag~ARPaa~~a~l~~~kkPD~lvTVFAGqDkEAt~------~aR~yf~~~pPSSPS~ALfKdGelVh~ieRh 125 (147)
T 3fhk_A 55 VCG-CAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATA------KMREYFTGAAPSSPSMALLKGKEVVHFIPRH 125 (147)
T ss_dssp SSH-HHHHTHHHHHHHHHHHCSSCCSEEEEEETTTSHHHHH------HHHTTSTTCCCCSSEEEEEETTEEEEEECGG
T ss_pred ccc-ccccccCHHHHHHhhhcCCCCCceEEeccCCCHHHHH------HHHHhcCCCCCCCchheeeeCCEEEEEeehh
Confidence 688 553 45766665 33333456888998876441000 11222 22 356899999999987765433
No 358
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=33.22 E-value=34 Score=23.64 Aligned_cols=30 Identities=7% Similarity=0.006 Sum_probs=25.0
Q ss_pred eEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCC
Q 032841 29 ANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASP 65 (132)
Q Consensus 29 ~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~ 65 (132)
..-|.||.+ +-||.|=-..+.+.++.+.++
T Consensus 5 ~~~I~~~~D-------~~CPwcyi~~~~L~~~~~~~~ 34 (234)
T 3rpp_A 5 PRTVELFYD-------VLSPYSWLGFEILCRYQNIWN 34 (234)
T ss_dssp CEEEEEEEC-------TTCHHHHHHHHHHHHHTTTSS
T ss_pred CceEEEEEe-------CCCHHHHHHHHHHHHHHHHcC
Confidence 345788887 799999999999999877664
No 359
>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}
Probab=31.59 E-value=1.3e+02 Score=20.86 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=17.9
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
.+||.|++..-.+--+.+..+-.+..+.++..
T Consensus 38 ~~cP~~~rv~~~L~ll~~~~gi~ye~~~v~~~ 69 (260)
T 2yv7_A 38 GACLFCQEYFMDLYLLAELKTISLKVTTVDMQ 69 (260)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSSEEEEEEECTT
T ss_pred CcChHHHHHHHHHHhHHHhcCCCceEEEeccc
Confidence 48999998877663332322223445555543
No 360
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=29.13 E-value=97 Score=18.66 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=26.8
Q ss_pred CCChhHHhhhHHHHHHH-HhCCCCcEEEEEEeCCCcCcc
Q 032841 45 SWCPDCVRAEPVIYKTL-EASPDDIALLQAYVGDRPTWR 82 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~-~~~~~~~~~~~v~~~~~~~~~ 82 (132)
|+||.-..+...+++.. ...+ ++.=+.|++.-.+.|.
T Consensus 55 p~cp~~~~i~~~i~~al~~~l~-Gv~~V~V~l~~~p~W~ 92 (108)
T 3lno_A 55 IGCPMAGQIVSDVKKVLSTNVP-EVNEIEVNVVWNPPWS 92 (108)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCT-TCCCEEEEECCSSCCC
T ss_pred CCCcHHHHHHHHHHHHHHHhCC-CCceEEEEEEecCCCC
Confidence 68998887877787776 6665 4555777877777664
No 361
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=28.85 E-value=1e+02 Score=20.52 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=29.3
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCe
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDI 109 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~ 109 (132)
|.||.|++.+=.+.... . .+.++.|+....+ ..|. +.--...||+++. ++|.
T Consensus 29 ~~SP~~~rVr~~L~e~g--i--~~e~~~v~~~~~~------~~~~--~~nP~gkVPvL~~-~dG~ 80 (225)
T 4glt_A 29 NTSPYARKVRVVAAEKR--I--DVDMVLVVLADPE------CPVA--DHNPLGKIPVLIL-PDGE 80 (225)
T ss_dssp SSCHHHHHHHHHHHHHT--C--CCEEEECCTTCSS------SCGG--GTCTTCCSCEEEC-TTSC
T ss_pred CCCHHHHHHHHHHHHhC--C--CCEEEEeCCCCCC------HHHH--HhCCCCCCCEEEe-CCCC
Confidence 48999999888777652 2 3556666654432 1121 1111346998753 4554
No 362
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=28.03 E-value=9.1 Score=28.08 Aligned_cols=10 Identities=30% Similarity=0.753 Sum_probs=7.9
Q ss_pred CCChhHHhhh
Q 032841 45 SWCPDCVRAE 54 (132)
Q Consensus 45 pWC~~C~~~~ 54 (132)
-|||.|+...
T Consensus 280 ~~CP~CQ~~~ 289 (295)
T 3vk8_A 280 YWAPAIQKLE 289 (295)
T ss_dssp EECTTTCBCC
T ss_pred EECCCCCCCc
Confidence 3999998754
No 363
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=27.71 E-value=1e+02 Score=20.20 Aligned_cols=52 Identities=17% Similarity=0.098 Sum_probs=28.9
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEeCCeE
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWENDIV 110 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~~g~~ 110 (132)
++||.|++.+=.+.... . .+..+.++...... .|. .......+|++. ++|..
T Consensus 13 ~~sp~~~~v~~~L~~~g--i--~~e~~~v~~~~~~~------~~~--~~~P~g~vP~L~--~~g~~ 64 (216)
T 3lyk_A 13 KDDIYCHQVKIVLAEKG--V--LYENAEVDLQALPE------DLM--ELNPYGTVPTLV--DRDLV 64 (216)
T ss_dssp TTCHHHHHHHHHHHHHT--C--CCEEEECCTTSCCH------HHH--HHCTTCCSCEEE--ETTEE
T ss_pred CCChhHHHHHHHHHHcC--C--CcEEEeCCcccCcH------HHH--hhCCCCCcCeEE--ECCeE
Confidence 38999999887776652 1 35555565543210 011 112234789986 46643
No 364
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=27.50 E-value=1e+02 Score=18.29 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=26.6
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCcc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWR 82 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~ 82 (132)
|+||.-..+...+++..+..+ ++.=+.|++...+.|.
T Consensus 53 ~~cp~~~~l~~~i~~al~~l~-gv~~v~V~l~~~p~W~ 89 (103)
T 1uwd_A 53 PMCPLAGMILSDAEEAIKKIE-GVNNVEVELTFDPPWT 89 (103)
T ss_dssp SCCSSHHHHHHHHHHHHHTSS-SCCEEEEEECCSSCCC
T ss_pred CCCcHHHHHHHHHHHHHHhCC-CcceEEEEEecCCCCC
Confidence 589987777777777766665 4555788887777664
No 365
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=26.92 E-value=7.8 Score=27.96 Aligned_cols=8 Identities=38% Similarity=1.319 Sum_probs=6.2
Q ss_pred CChhHHhh
Q 032841 46 WCPDCVRA 53 (132)
Q Consensus 46 WC~~C~~~ 53 (132)
|||.|+..
T Consensus 257 ~CP~CQ~~ 264 (266)
T 1ee8_A 257 FCPTCQGE 264 (266)
T ss_dssp ECTTTTTC
T ss_pred ECCCCCCC
Confidence 88888864
No 366
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=26.92 E-value=5.1 Score=18.80 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.1
Q ss_pred CChhHHhhhHHHHHHHHh
Q 032841 46 WCPDCVRAEPVIYKTLEA 63 (132)
Q Consensus 46 WC~~C~~~~p~~~~~~~~ 63 (132)
-||-|+...|-.+.+...
T Consensus 5 ~CpvCk~q~Pd~kt~~~H 22 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIH 22 (28)
T ss_dssp ECTTSSCEESSHHHHHHH
T ss_pred cCccccccCcChHHHHHH
Confidence 499999999987776543
No 367
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=26.57 E-value=84 Score=18.68 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=26.4
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCcc
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWR 82 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~ 82 (132)
|+||.-..+...+++..+..+ ++.=+.|++...+.|.
T Consensus 52 ~~cp~~~~l~~~i~~al~~l~-gv~~V~V~l~~~p~W~ 88 (103)
T 3cq1_A 52 PGCPLHDSLGEAVRQALSRLP-GVEEVEVEVTFEPPWT 88 (103)
T ss_dssp SSCCSSCHHHHHHHHHHHTST-TCCEEEEEECCSSCCC
T ss_pred CCCcHHHHHHHHHHHHHHhCC-CceeEEEEEecCCCCC
Confidence 588887777777777766655 5656788887777664
No 368
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=26.36 E-value=38 Score=25.71 Aligned_cols=27 Identities=7% Similarity=0.129 Sum_probs=20.2
Q ss_pred ccccccc-cceEEEEeCCeEeEEecCcc
Q 032841 92 SRFKLTG-VPTLFRWENDIVSGRLEDHE 118 (132)
Q Consensus 92 ~~~~v~~-vPt~~~~~~g~~~~~~~~~~ 118 (132)
.++|+-+ -+...+|.+|+.+.++.+.+
T Consensus 320 ADiGiagg~~~~~lf~~Ge~v~~v~~~~ 347 (366)
T 3noy_A 320 ADIGLACGRGFAWLFKHGKPIKKVDESE 347 (366)
T ss_dssp CSEEEEECSSEEEEEETTEEEEEEESCH
T ss_pred CCEeEecCCCceEEEECCEEeeecCHHH
Confidence 4677764 45688899999988877664
No 369
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=24.98 E-value=2.4e+02 Score=21.73 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=40.2
Q ss_pred CCeEEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCCCcCccCCCCCccccccccccccceEEEEe
Q 032841 27 NKANFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPDDIALLQAYVGDRPTWRNPQHPFRVNSRFKLTGVPTLFRWE 106 (132)
Q Consensus 27 ~~~v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~v~~vPt~~~~~ 106 (132)
.+++.+.++.+ -|+.|..+...++++++-.+ ++.+. ... . . . ...|++.+.+
T Consensus 18 ~~~v~l~~~~~--------~~~~~~~~~~~~~~~~~~s~-~i~~~---~~~-~----------~--~---~~~p~~~~~~ 69 (521)
T 1hyu_A 18 TKPVELIATLD--------DSAKSAEIKELLAEIAELSD-KVTFK---EDN-T----------L--P---VRKPSFLITN 69 (521)
T ss_dssp CSCEEEEEECC--------SSHHHHHHHHHHHHHHTTCT-TEEEE---ECT-T----------S--S---SCSSEEEEEC
T ss_pred CCCEEEEEEeC--------CCcchHHHHHHHHHHHHhCC-ceEEE---EcC-C----------c--c---cCCCEEEEec
Confidence 35666666665 69999999999999976544 66642 211 1 0 0 3579998887
Q ss_pred CCeEe-EEecCc
Q 032841 107 NDIVS-GRLEDH 117 (132)
Q Consensus 107 ~g~~~-~~~~~~ 117 (132)
+|+.. -|+.|.
T Consensus 70 ~~~~~~i~f~g~ 81 (521)
T 1hyu_A 70 PGSQQGPRFAGS 81 (521)
T ss_dssp TTCCCSCEEESC
T ss_pred CCCcceEEEecc
Confidence 66432 255554
No 370
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=24.94 E-value=1e+02 Score=21.19 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=28.3
Q ss_pred EEEEEEeeCCCCCCCCCChhHHhhhHHHHHHHHhCCC--CcEEEEE
Q 032841 30 NFILFLADKDPSTSLSWCPDCVRAEPVIYKTLEASPD--DIALLQA 73 (132)
Q Consensus 30 v~v~F~a~~~~~~~~pWC~~C~~~~p~~~~~~~~~~~--~~~~~~v 73 (132)
+-|.||.+ +-||.|--..+.|+++.+.++. ++.+...
T Consensus 3 ~~I~~~~D-------~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~ 41 (239)
T 3gl5_A 3 MRVEIWSD-------IACPWCYVGKARFEKALAAFPHRDGVEVVHR 41 (239)
T ss_dssp EEEEEEEC-------SSCHHHHHHHHHHHHHHHTCTTGGGEEEEEE
T ss_pred eEEEEEEe-------CcCHhHHHHHHHHHHHHHhcCccCceEEEEE
Confidence 45788888 7999999999999999887752 3444433
No 371
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*
Probab=23.95 E-value=1.4e+02 Score=19.30 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=17.6
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEe
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYV 75 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~ 75 (132)
++||.|++.+-.+.... -......++.
T Consensus 9 ~~sp~~~~v~~~L~~~g----i~~e~~~v~~ 35 (211)
T 1gnw_A 9 PASIATRRVLIALHEKN----LDFELVHVEL 35 (211)
T ss_dssp TTCHHHHHHHHHHHHTT----CCCEEEECCG
T ss_pred CCCcchHHHHHHHHhcC----CCcEEEEecc
Confidence 48999999877766532 1345555554
No 372
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=23.90 E-value=1.1e+02 Score=20.59 Aligned_cols=28 Identities=4% Similarity=-0.185 Sum_probs=18.8
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
++||.|++.+-.+....- .+..+.|+..
T Consensus 19 ~~sp~~~~vr~~L~~~gi----~~e~~~v~~~ 46 (231)
T 4dej_A 19 KDDLKSHQVRLVLAEKGV----GVEITYVTDE 46 (231)
T ss_dssp SSCHHHHHHHHHHHHHTC----BCEEEECCSS
T ss_pred CCChHHHHHHHHHHHcCC----CcEEEEcCcc
Confidence 389999998877776531 3455556554
No 373
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=23.87 E-value=12 Score=27.11 Aligned_cols=6 Identities=50% Similarity=1.824 Sum_probs=4.3
Q ss_pred CChhHH
Q 032841 46 WCPDCV 51 (132)
Q Consensus 46 WC~~C~ 51 (132)
|||.|+
T Consensus 267 ~CP~CQ 272 (273)
T 3u6p_A 267 YCPRCQ 272 (273)
T ss_dssp ECTTTC
T ss_pred ECCCCC
Confidence 777776
No 374
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=23.20 E-value=9.6 Score=19.28 Aligned_cols=9 Identities=56% Similarity=1.287 Sum_probs=7.0
Q ss_pred CChhHHhhh
Q 032841 46 WCPDCVRAE 54 (132)
Q Consensus 46 WC~~C~~~~ 54 (132)
||..|+...
T Consensus 13 ~CE~C~~~~ 21 (39)
T 2l9z_A 13 WCTLCDRAY 21 (39)
T ss_dssp EEGGGTEEE
T ss_pred HHHHHhhhc
Confidence 999998653
No 375
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=23.04 E-value=59 Score=25.02 Aligned_cols=17 Identities=29% Similarity=0.634 Sum_probs=12.8
Q ss_pred CCChhHHhhhHHHHHHH
Q 032841 45 SWCPDCVRAEPVIYKTL 61 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~ 61 (132)
++|+.|++..-.+-+++
T Consensus 389 ~Fc~VCr~aI~~~i~fy 405 (407)
T 3p1v_A 389 EFCPVCQRAIRRMIEFY 405 (407)
T ss_dssp SCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhc
Confidence 59999998876665543
No 376
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=22.48 E-value=1.4e+02 Score=19.92 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=18.9
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeCC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVGD 77 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~ 77 (132)
++||.|++.+=.+... +-.+..+.++...
T Consensus 30 ~~sp~~~~v~~~L~~~----gi~~e~~~v~~~~ 58 (239)
T 3q18_A 30 RFCPYSHRTRLVLKAK----DIRHEVVNINLRN 58 (239)
T ss_dssp TTCHHHHHHHHHHHHT----TCCEEEEEBCSSS
T ss_pred CCChHHHHHHHHHHHc----CCCcEEEecCccc
Confidence 3899999988777664 2235555565543
No 377
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=22.33 E-value=13 Score=26.75 Aligned_cols=6 Identities=33% Similarity=1.420 Sum_probs=4.1
Q ss_pred CChhHH
Q 032841 46 WCPDCV 51 (132)
Q Consensus 46 WC~~C~ 51 (132)
|||.|+
T Consensus 262 ~CP~CQ 267 (268)
T 1k82_A 262 YCRQCQ 267 (268)
T ss_dssp ECTTTC
T ss_pred ECCCCC
Confidence 677775
No 378
>2xzf_A Formamidopyrimidine-DNA glycosylase; hydrolase-DNA complex; HET: VET; 1.80A {Lactococcus lactis subsp} PDB: 1pm5_A* 1xc8_A* 1pji_A* 2xzu_A* 3c58_A* 1tdz_A* 1nnj_A 1kfv_A 1pjj_A*
Probab=22.14 E-value=14 Score=26.72 Aligned_cols=7 Identities=43% Similarity=1.488 Sum_probs=4.5
Q ss_pred CChhHHh
Q 032841 46 WCPDCVR 52 (132)
Q Consensus 46 WC~~C~~ 52 (132)
|||.|+.
T Consensus 264 ~CP~CQ~ 270 (271)
T 2xzf_A 264 FCPVCQQ 270 (271)
T ss_dssp ECTTTSC
T ss_pred ECCCCCC
Confidence 6777753
No 379
>1k3x_A Endonuclease VIII; hydrolase/DNA, hydrolase-DNA complex; HET: BRU PED; 1.25A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8 PDB: 1k3w_A* 1q39_A 2ea0_A* 2oq4_A* 1q3c_A 2opf_A* 1q3b_A*
Probab=21.10 E-value=14 Score=26.43 Aligned_cols=6 Identities=67% Similarity=2.406 Sum_probs=3.5
Q ss_pred CChhHH
Q 032841 46 WCPDCV 51 (132)
Q Consensus 46 WC~~C~ 51 (132)
|||.|+
T Consensus 256 ~CP~CQ 261 (262)
T 1k3x_A 256 WCPGCQ 261 (262)
T ss_dssp ECTTTC
T ss_pred ECCCCC
Confidence 566664
No 380
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=20.89 E-value=14 Score=27.21 Aligned_cols=17 Identities=6% Similarity=0.042 Sum_probs=11.5
Q ss_pred CCCChhHHhhhHHHHHH
Q 032841 44 LSWCPDCVRAEPVIYKT 60 (132)
Q Consensus 44 ~pWC~~C~~~~p~~~~~ 60 (132)
.-|||.|+...+..-..
T Consensus 269 t~~CP~CQ~~~~~~~~~ 285 (310)
T 3twl_A 269 TAYVPELQKLYGKDAEK 285 (310)
T ss_dssp --ECTTTCCCCHHHHHH
T ss_pred cEECCCCcCCCCCCcch
Confidence 34999999977665444
No 381
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=20.84 E-value=8.9 Score=18.79 Aligned_cols=18 Identities=17% Similarity=0.527 Sum_probs=12.4
Q ss_pred CChhHHhhhHHHHHHHHh
Q 032841 46 WCPDCVRAEPVIYKTLEA 63 (132)
Q Consensus 46 WC~~C~~~~p~~~~~~~~ 63 (132)
-||-|++.....+.+...
T Consensus 7 iCP~C~~~l~s~~~L~~H 24 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKH 24 (34)
T ss_dssp ECTTTCCEESSHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHH
Confidence 599998877666655443
No 382
>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*
Probab=20.53 E-value=1.8e+02 Score=18.75 Aligned_cols=28 Identities=7% Similarity=-0.091 Sum_probs=19.2
Q ss_pred CCChhHHhhhHHHHHHHHhCCCCcEEEEEEeC
Q 032841 45 SWCPDCVRAEPVIYKTLEASPDDIALLQAYVG 76 (132)
Q Consensus 45 pWC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~ 76 (132)
++||.|++.+-.+....-. ..+..+++.
T Consensus 9 ~~s~~~~~v~~~L~~~gi~----y~~~~v~~~ 36 (214)
T 4id0_A 9 PASPYVRKVMVLLHETGQL----NRVALQASQ 36 (214)
T ss_dssp SSCHHHHHHHHHHHHHTCG----GGEEEEECC
T ss_pred CCCChHHHHHHHHHHcCCC----cceEEeecc
Confidence 4999999988887776322 345666664
Done!