BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032845
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q642A5|DPOE3_RAT DNA polymerase epsilon subunit 3 OS=Rattus norvegicus GN=Pole3
PE=2 SV=1
Length = 145
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 8 PEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKES 67
PE LP ++ R++K+ L PD +++ K+A A +A +F+ Y ++ AN+ +
Sbjct: 5 PEDLNLPNAVITRIIKEAL----PD-GVNISKEARSAISRAASVFVLYATSCANNFAMKG 59
Query: 68 KRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
KR+T+NA DVL A+EE++F FV PL+++L+A
Sbjct: 60 KRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>sp|Q5R4W3|DPOE3_PONAB DNA polymerase epsilon subunit 3 OS=Pongo abelii GN=POLE3 PE=2
SV=1
Length = 147
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 8 PEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKES 67
PE LP ++ R++K+ L PD +++ K+A A +A +F+ Y ++ AN+ +
Sbjct: 5 PEDLNLPNAVITRIIKEAL----PD-GVNISKEARSAISRAASVFVLYATSCANNFAMKG 59
Query: 68 KRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
KR+T+NA DVL A+EE++F FV PL+++L+A
Sbjct: 60 KRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>sp|Q9NRF9|DPOE3_HUMAN DNA polymerase epsilon subunit 3 OS=Homo sapiens GN=POLE3 PE=1
SV=1
Length = 147
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 8 PEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKES 67
PE LP ++ R++K+ L PD +++ K+A A +A +F+ Y ++ AN+ +
Sbjct: 5 PEDLNLPNAVITRIIKEAL----PD-GVNISKEARSAISRAASVFVLYATSCANNFAMKG 59
Query: 68 KRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
KR+T+NA DVL A+EE++F FV PL+++L+A
Sbjct: 60 KRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>sp|Q3SZN5|DPOE3_BOVIN DNA polymerase epsilon subunit 3 OS=Bos taurus GN=POLE3 PE=2 SV=1
Length = 147
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 8 PEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKES 67
PE LP ++ R++K+ L PD +++ K+A A +A +F+ Y ++ AN+ +
Sbjct: 5 PEDLNLPNAVITRIIKEAL----PD-GVNISKEARSAISRAASVFVLYATSCANNFAMKG 59
Query: 68 KRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
KR+T+NA DVL A+EE++F FV PL+++L+A
Sbjct: 60 KRKTLNASDVLSAMEEMEFQRFVTPLKEALEA 91
>sp|Q9JKP7|DPOE3_MOUSE DNA polymerase epsilon subunit 3 OS=Mus musculus GN=Pole3 PE=2
SV=1
Length = 145
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 8 PEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKES 67
PE LP ++ R++K+ L PD +++ K+A A +A +F+ Y ++ AN+ +
Sbjct: 5 PEDLNLPNAVITRIIKEAL----PD-GVNISKEARSAISRAASVFVLYATSCANNFAMKG 59
Query: 68 KRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
KR+T+NA DVL A+EE++F F+ PL+++L+A
Sbjct: 60 KRKTLNASDVLSAMEEMEFQRFITPLKEALEA 91
>sp|Q75JQ9|DPOE3_DICDI DNA polymerase epsilon subunit 3 OS=Dictyostelium discoideum
GN=pole3 PE=3 SV=1
Length = 138
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 7 VPEAEELPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKE 66
+ E+++LP IV R++K L P+ + K++ LA ++A+++IHYL+A + D
Sbjct: 1 MSESQDLPGAIVNRIIKASL----PEG-VLCAKESRLAIAKAAKVWIHYLTAASIDFSSH 55
Query: 67 SKRQTINAEDVLKAIEEIDFTEFVDPLRDSLDA 99
S R TI+ +DV +AIEEIDF F L + L A
Sbjct: 56 SGRSTISPKDVFQAIEEIDFENFKPQLEEYLAA 88
>sp|P87174|DPB4_SCHPO DNA polymerase epsilon subunit D OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dpb4 PE=1 SV=1
Length = 210
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP++I+ R+VK L P+ + V K+AL A SA +F+ +L++ + +I + R+ +
Sbjct: 17 LPRSIIMRLVKGVL----PEKSL-VQKEALKAMINSATLFVSFLTSASGEIATNNNRKIL 71
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSLDAKQIV 103
+DVL A++EI++ EF L+ L+A ++
Sbjct: 72 MPQDVLNALDEIEYPEFSKTLKKHLEAYELA 102
>sp|Q6BIP4|DPB4_DEBHA DNA polymerase epsilon subunit D OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DPB4 PE=3 SV=2
Length = 247
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDIS---VHKDALLAFCESARIFIHYLSATANDICKESKR 69
P+ V+++ K+ + N S D S + KD+++A S+ +F+ +L A I K+ R
Sbjct: 31 FPRATVQKLAKN-IMNASSDEGASNMILAKDSMIALQRSSTVFVSHLMFQARQISKDEGR 89
Query: 70 QTINAEDVLKAIEEIDFTEFV 90
+TINA+D+L A+E+ +F+ F+
Sbjct: 90 KTINAQDILSALEKAEFSGFI 110
>sp|Q55DJ5|NC2B_DICDI Protein Dr1 homolog OS=Dictyostelium discoideum GN=dr1 PE=3 SV=1
Length = 178
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 13 LPKTIVRRVVKDKLHN---CSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKR 69
LPK V +++K+ L CS +T +D +L C FIH +S+ ANDIC ++
Sbjct: 13 LPKATVSKLIKEMLPQDVKCSNET-----RDLILECCVE---FIHLISSEANDICGREQK 64
Query: 70 QTINAEDVLKAIEEIDFTEFVDPLRDSLD 98
+TI AE V+KA+ E+ F+++ + D D
Sbjct: 65 RTIAAEHVIKALTELGFSDYTQKVSDVYD 93
>sp|Q5QMG3|NFYB2_ORYSJ Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp.
japonica GN=NFYB2 PE=2 SV=1
Length = 178
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K + + + KDA E FI ++++ A+D C++ KR+TI
Sbjct: 39 LPIANISRIMKKAV-----PANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTI 93
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N ED+L A+ + F E+VDPL+
Sbjct: 94 NGEDLLFAMGTLGFEEYVDPLK 115
>sp|P25208|NFYB_HUMAN Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB
PE=1 SV=2
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 59 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V A++ L
Sbjct: 114 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGL 161
>sp|Q6RG77|NFYB_HORSE Nuclear transcription factor Y subunit beta OS=Equus caballus
GN=NFYB PE=2 SV=1
Length = 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 59 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V A++ L
Sbjct: 114 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGL 161
>sp|Q32KW0|NFYB_BOVIN Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB
PE=2 SV=1
Length = 207
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 59 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V A++ L
Sbjct: 114 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDGL 161
>sp|Q54WV0|NFYB_DICDI Nuclear transcription factor Y subunit beta OS=Dictyostelium
discoideum GN=nfyB PE=3 SV=1
Length = 490
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K L N + V KDA + FI ++++ A+D C++ KR+TI
Sbjct: 53 LPIANIIRIMKKALPN-----NAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTI 107
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N ED++ A+ + F +V+PL+
Sbjct: 108 NGEDIIAAMVSLGFENYVEPLK 129
>sp|P63140|NFYB_RAT Nuclear transcription factor Y subunit beta OS=Rattus norvegicus
GN=Nfyb PE=1 SV=1
Length = 207
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 59 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V A++ L
Sbjct: 114 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGL 161
>sp|P63139|NFYB_MOUSE Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb
PE=1 SV=1
Length = 207
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 59 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 113
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V A++ L
Sbjct: 114 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGL 161
>sp|Q9FGJ3|NFYB2_ARATH Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana
GN=NFYB2 PE=2 SV=1
Length = 190
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K L + + KDA E FI +++ A+D C++ KR+TI
Sbjct: 32 LPIANVSRIMKKALP-----ANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTI 86
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++V+PL+
Sbjct: 87 NGDDLLWAMTTLGFEDYVEPLK 108
>sp|Q67XJ2|NFYBA_ARATH Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana
GN=NFYB10 PE=2 SV=1
Length = 176
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K L + + KDA E FI ++++ A+D C+ KR+TI
Sbjct: 34 LPIANISRIMKRGLP-----LNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTI 88
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F +++DPL+
Sbjct: 89 NGDDLLWAMATLGFEDYIDPLK 110
>sp|O14348|NC2B_SCHPO Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ncb2 PE=3 SV=1
Length = 161
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LPK V+++V D L D++ K+A E FIH +S+ AN+IC++ ++TI
Sbjct: 12 LPKATVQKMVSDIL-----PVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTI 66
Query: 73 NAEDVLKAIEEIDFTEFV 90
AE ++KA+E ++F E++
Sbjct: 67 AAEHIIKALENLEFKEYI 84
>sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana
GN=NFYB3 PE=2 SV=1
Length = 161
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K L + + KDA E FI +++ A+D C+ KR+TI
Sbjct: 26 LPIANVSRIMKKAL-----PANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 80
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++V+PL+
Sbjct: 81 NGDDLLWAMTTLGFEDYVEPLK 102
>sp|P25207|NFYB_CHICK Nuclear transcription factor Y subunit beta OS=Gallus gallus
GN=NFYB PE=2 SV=2
Length = 205
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K N P T + KDA E FI ++++ A++ C + KR+TI
Sbjct: 57 LPIANVARIMK----NAIPQTG-KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 111
Query: 73 NAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVSQKVVASNPL 113
N ED+L A+ + F +V+PL R+++ ++ + V + L
Sbjct: 112 NGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGTVTTGDGL 159
>sp|Q750A4|DPB4_ASHGO DNA polymerase epsilon subunit D OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DPB4
PE=3 SV=1
Length = 204
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 2 ETEKVVPEAEELPKTIVRRVVKDKLHNC----SPDTDISVHKDALLAFCESARIFIHYLS 57
E EK+ + P++I+ + KD +H D + + KDA LA S+ +F+++L
Sbjct: 61 EQEKLTVDDLLFPRSIITSLAKDAVHQAVQTAEQDPRVMLSKDASLALQRSSTVFVNHLL 120
Query: 58 ATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPLRD 95
A I + + R++ + EDVLKA+++I F +R+
Sbjct: 121 MHARQIAQSNDRKSCSGEDVLKALDQIGLAGFESVVRE 158
>sp|Q5XI68|NC2B_RAT Protein Dr1 OS=Rattus norvegicus GN=Dr1 PE=2 SV=1
Length = 176
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
+P+ + +++K+ L N + V DA FIH +S+ AN+IC +S+++TI
Sbjct: 13 IPRAAINKMIKETLPN------VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSLDAKQIVSQK 106
+ E V++A+E + F ++ +++ L + V+ K
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALK 100
>sp|Q91WV0|NC2B_MOUSE Protein Dr1 OS=Mus musculus GN=Dr1 PE=2 SV=1
Length = 176
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
+P+ + +++K+ L N + V DA FIH +S+ AN+IC +S+++TI
Sbjct: 13 IPRAAINKMIKETLPN------VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSLDAKQIVSQK 106
+ E V++A+E + F ++ +++ L + V+ K
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALK 100
>sp|Q01658|NC2B_HUMAN Protein Dr1 OS=Homo sapiens GN=DR1 PE=1 SV=1
Length = 176
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
+P+ + +++K+ L N + V DA FIH +S+ AN+IC +S+++TI
Sbjct: 13 IPRAAINKMIKETLPN------VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSLDAKQIVSQK 106
+ E V++A+E + F ++ +++ L + V+ K
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALK 100
>sp|Q5ZMV3|NC2B_CHICK Protein Dr1 OS=Gallus gallus GN=DR1 PE=2 SV=1
Length = 176
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
+P+ + +++K+ L N + V DA FIH +S+ AN+IC +S+++TI
Sbjct: 13 IPRAAINKMIKETLPN------VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSLDAKQIVSQK 106
+ E V++A+E + F ++ +++ L + V+ K
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALK 100
>sp|Q9SLG0|NFYB1_ARATH Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana
GN=NFYB1 PE=1 SV=2
Length = 141
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K L P+ I KDA E FI ++++ A+D C++ KR+T+
Sbjct: 26 LPIANISRIMKKALP---PNGKIG--KDAKDTVQECVSEFISFITSEASDKCQKEKRKTV 80
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++++PL+
Sbjct: 81 NGDDLLWAMATLGFEDYLEPLK 102
>sp|P25210|NFYB_PETMA Nuclear transcription factor Y subunit beta OS=Petromyzon marinus
GN=NFYB PE=2 SV=1
Length = 209
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K + + + KDA E FI ++++ A++ C + KR+TI
Sbjct: 60 LPIANVARIMKTSIPSSG-----KIAKDAKECVQECVSEFISFITSEASERCHQEKRKTI 114
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSL 97
N ED+L A+ + F +V+PL+ L
Sbjct: 115 NGEDILFAMSTLGFDSYVEPLKQYL 139
>sp|Q6CHS6|DPB4_YARLI DNA polymerase epsilon subunit D OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DPB4 PE=3 SV=1
Length = 163
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 14 PKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTIN 73
PK+ ++ + K+ L PD D + KDAL A +A +F+ Y+++ N + R+ I
Sbjct: 38 PKSTIKNLAKETL----PD-DAIISKDALTAIQRAATLFVSYMASHGNASAEAGGRKKIT 92
Query: 74 AEDVLKAIEEIDFTEFVDPLRDSLDA-KQIVSQK 106
+DV A++++D +FV + S++ +Q V+Q+
Sbjct: 93 PQDVFVALKDVDLAQFVPSVTQSVNEFEQEVAQR 126
>sp|Q9SIT9|NFYB7_ARATH Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana
GN=NFYB7 PE=2 SV=1
Length = 215
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K L + + KDA E FI +++ A+D C+ KR+TI
Sbjct: 41 LPIANVGRIMKKVL-----PGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTI 95
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D++ AI + F ++V PL+
Sbjct: 96 NGDDIIWAITTLGFEDYVAPLK 117
>sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2
SV=1
Length = 179
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K + + + KDA E FI ++++ A+D C+ KR+TI
Sbjct: 36 LPIANISRIMKKAI-----PANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 90
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++++PL+
Sbjct: 91 NGDDLLWAMATLGFEDYIEPLK 112
>sp|Q8VYK4|NFYB8_ARATH Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana
GN=NFYB8 PE=2 SV=1
Length = 173
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K L + + KDA E FI ++++ A+D C+ KR+TI
Sbjct: 35 LPIANISRIMKRGL-----PANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTI 89
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++++PL+
Sbjct: 90 NGDDLLWAMATLGFEDYMEPLK 111
>sp|P49592|NC2B_ARATH Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2 SV=1
Length = 159
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LPK + +++K+ L D+ V +DA E FI+ +S+ +ND+C + ++TI
Sbjct: 16 LPKATMTKIIKEML-----PPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTI 70
Query: 73 NAEDVLKAIEEIDFTEFVD 91
E VLKA++ + F E+++
Sbjct: 71 APEHVLKALQVLGFGEYIE 89
>sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp.
japonica GN=NFYB3 PE=1 SV=2
Length = 185
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP + R++K + + + KDA E FI ++++ A+D C+ KR+TI
Sbjct: 43 LPIANISRIMKKAIP-----ANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTI 97
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N +D+L A+ + F ++++PL+
Sbjct: 98 NGDDLLWAMATLGFEDYIEPLK 119
>sp|Q9SFD8|NFYB9_ARATH Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana
GN=NFYB9 PE=1 SV=2
Length = 238
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 52 FIHYLSATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPL 93
+I +++ AN+ C+ +R+TI AED+L A+ ++ F +VDPL
Sbjct: 98 YISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPL 139
>sp|P25211|NFYB_XENLA Nuclear transcription factor Y subunit beta (Fragment) OS=Xenopus
laevis GN=nfyb PE=2 SV=1
Length = 122
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 52 FIHYLSATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPL-------RDSLDAKQIVS 104
FI ++++ A++ C + KR+TIN ED+L A+ + F +V+PL R+++ ++ +
Sbjct: 8 FISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 67
Query: 105 QKVVASNPL 113
V + L
Sbjct: 68 GTVTTGDGL 76
>sp|Q9VJQ5|NC2B_DROME Protein Dr1 OS=Drosophila melanogaster GN=NC2beta PE=1 SV=1
Length = 183
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 2 ETEKVVPEAEE----LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLS 57
+ E + P AE+ LP+ + +++K+ + P ++ L+ C S FIH +S
Sbjct: 5 QEELLPPSAEDDELTLPRASINKIIKELV----PTVRVANESRELILNCCSE--FIHLIS 58
Query: 58 ATANDICKESKRQTINAEDVLKAIEEIDFTEF 89
+ AN++C ++TINAE VL+A+E + F ++
Sbjct: 59 SEANEVCNMRNKKTINAEHVLEALERLGFHDY 90
>sp|Q92317|NCB2_YEAST Negative cofactor 2 complex subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NCB2 PE=1
SV=1
Length = 146
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LPK V++++ + L D D+ KDA S FI LS+ A+++ ++TI
Sbjct: 10 LPKATVQKMISEIL-----DQDLMFTKDAREIIINSGIEFIMILSSMASEMADNEAKKTI 64
Query: 73 NAEDVLKAIEEIDFTEFV 90
E V+KA+EE+++ EF+
Sbjct: 65 APEHVIKALEELEYNEFI 82
>sp|Q84W66|NFYB6_ARATH Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana
GN=NFYB6 PE=1 SV=2
Length = 234
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 52 FIHYLSATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPL 93
+I +++ AN+ C+ +R+TI AEDVL A+ ++ F ++++PL
Sbjct: 97 YISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPL 138
>sp|Q04603|DPB4_YEAST DNA polymerase epsilon subunit D OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DPB4 PE=1 SV=1
Length = 196
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 37 VHKDALLAFCESARIFIHYLSATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPLRDS 96
++KDA LA A +F+++L A +I K +++ + +DVL A++ I + P+RD
Sbjct: 55 INKDASLALQRGATVFVNHLLLFAREIAKSQDKKSCSVDDVLSALDHIGHSALKGPVRDK 114
Query: 97 LDAKQ 101
LD Q
Sbjct: 115 LDEYQ 119
>sp|Q65XK1|NFYB4_ORYSJ Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp.
japonica GN=NFYB4 PE=2 SV=2
Length = 143
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 37 VHKDALLAFCESARIFIHYLSATANDICKESKRQTINAEDVLKAIEEIDFTEFVDPLR 94
+ KD+ + E FI ++++ A+D C + KR+TIN +D++ ++ + F ++V+PL+
Sbjct: 46 IAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLK 103
>sp|Q6CJD7|DPB4_KLULA DNA polymerase epsilon subunit D OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DPB4 PE=3 SV=1
Length = 216
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 13 LPKTIVRRVVKDKLHNC----SPDTDISVHKDALLAFCESARIFIHYLSATANDICKESK 68
PK+I+ + K+ L N + I+V KDA LA SA +F+++L A K+S
Sbjct: 33 FPKSIITSLAKESLQNAFQKGEEERRITVSKDAALAMQRSATVFVNHLLMFARMNAKDSN 92
Query: 69 RQTINAEDVLKAIEEIDF 86
R++ N +D++ A++ +
Sbjct: 93 RKSCNDQDIMAALDTLGL 110
>sp|P40914|HAP3_KLULA Transcriptional activator HAP3 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP3 PE=3 SV=1
Length = 205
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K+ L P T V KDA E FI ++++ A D C KR+TI
Sbjct: 27 LPINNVARLMKNTL----PAT-TKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N ED+L ++ + F + + L+
Sbjct: 82 NGEDILLSLHALGFENYAEVLK 103
>sp|O82248|NFYB5_ARATH Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana
GN=NFYB5 PE=2 SV=1
Length = 160
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K+ L + V K+A E FI +++ A+D C + KR+T+
Sbjct: 56 LPIANVGRIMKNIL-----PANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTV 110
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSL 97
N +D+ A+ + F ++ L+ L
Sbjct: 111 NGDDICWAMANLGFDDYAAQLKKYL 135
>sp|Q6FXD0|DPB4_CANGA DNA polymerase epsilon subunit D OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DPB4 PE=3 SV=1
Length = 191
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 30 SPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTINAEDVLKAIEEI 84
+P + V KDA +A SA +F+++L A ++ KE R++ N +D+L A+E +
Sbjct: 67 TPAKKLVVTKDASMALQHSATVFVNHLLMYARELAKEQDRRSCNVDDILNALEHM 121
>sp|P13434|HAP3_YEAST Transcriptional activator HAP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP3 PE=1 SV=1
Length = 144
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K+ L P +S KDA E I ++++ A+D C KR+TI
Sbjct: 42 LPINNVARLMKNTL---PPSAKVS--KDAKECMQECVSELISFVTSEASDRCAADKRKTI 96
Query: 73 NAEDVLKAIEEIDFTEFVDPLR 94
N ED+L ++ + F + + L+
Sbjct: 97 NGEDILISLHALGFENYAEVLK 118
>sp|P36611|HAP3_SCHPO Transcriptional activator hap3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hap3 PE=3 SV=1
Length = 116
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K L P+ + + K+A + FI +++ A++ C + KR+TI
Sbjct: 12 LPIANVARIMKSAL----PE-NAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTI 66
Query: 73 NAEDVLKAIEEIDFTEFVDPLRDSL 97
EDVL A+ + F + + L+ SL
Sbjct: 67 TGEDVLLALNTLGFENYAEVLKISL 91
>sp|Q13952|NFYC_HUMAN Nuclear transcription factor Y subunit gamma OS=Homo sapiens
GN=NFYC PE=1 SV=3
Length = 458
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 11 EELPKTIVRRVVKDKLHNCSPDTDIS-VHKDALLAFCESARIFIHYLSATANDICKESKR 69
+ELP +++++K D D+ + +A + F ++A+IFI L+ A +++KR
Sbjct: 41 QELPLARIKKIMK-------LDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKR 93
Query: 70 QTINAEDVLKAIEEIDFTEFVDPL--RDSLDA---KQIVSQKVVASNPLFFF 116
+T+ D+ AI + D +F+ + RD L ++ V Q V + P+ ++
Sbjct: 94 RTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYY 145
>sp|O04027|NFYB4_ARATH Nuclear transcription factor Y subunit B-4 OS=Arabidopsis
thaliana GN=NFYB4 PE=1 SV=1
Length = 139
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 13 LPKTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTI 72
LP V R++K L P ++ + K+A E A FI +++ A++ C R+T+
Sbjct: 8 LPIANVGRLMKQIL----P-SNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 73 NAEDVLKAIEEIDFTEFVDPL 93
N +D+ A+ + + D +
Sbjct: 63 NGDDIWWALSTLGLDNYADAV 83
>sp|Q8SRE2|H2B_ENCCU Histone H2B OS=Encephalitozoon cuniculi (strain GB-M1) GN=HTB1 PE=1
SV=1
Length = 130
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 15 KTIVRRVVKDKLHNCSPDTDISVHKDALLAFCESARIFIHYLSATANDICKESKRQTINA 74
K+ V+R+ ++ SPD +I + +++ C + F+ ++ A ++ ++ +QT+ +
Sbjct: 38 KSAVKRISRE----VSPDNNIMLTSNSIQVLCGISYDFVDTVADLAGELARKVGKQTVGS 93
Query: 75 EDVLKAIE 82
+D++ A E
Sbjct: 94 DDIISAFE 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,354,851
Number of Sequences: 539616
Number of extensions: 1550265
Number of successful extensions: 4932
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4857
Number of HSP's gapped (non-prelim): 80
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)