Query 032850
Match_columns 132
No_of_seqs 47 out of 49
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 10:38:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032850.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032850hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pila_ d.24.1.1 (A:) Pilin Gc 21.5 25 0.0018 21.3 2.1 23 83-105 8-30 (158)
2 g1kve.1 d.70.1.2 (A:,B:) SMK t 19.2 14 0.00099 25.9 0.5 15 83-97 25-39 (140)
3 d1fuia2 c.85.1.1 (A:1-355) L-f 18.4 9.5 0.00069 30.3 -0.6 45 82-126 179-226 (355)
4 d1jb0l_ f.31.1.1 (L:) Photosys 14.4 20 0.0015 25.7 0.4 24 73-96 113-136 (151)
5 d2ajra1 c.72.1.1 (A:1-319) Put 13.6 20 0.0015 25.6 0.2 14 72-85 257-271 (319)
6 d1t5ja_ a.209.1.1 (A:) Hypothe 10.4 58 0.0043 22.6 1.9 19 78-96 8-26 (301)
7 d1kkga_ d.52.7.1 (A:) Ribosome 10.2 35 0.0025 21.8 0.5 30 95-131 75-106 (108)
8 d1ciya3 f.1.3.1 (A:33-255) del 9.8 34 0.0025 24.3 0.4 20 85-105 23-42 (223)
9 d1cvua1 a.93.1.2 (A:74-583) Pr 9.0 63 0.0046 26.0 1.8 30 76-105 430-464 (511)
10 d2f02a1 c.72.1.1 (A:1-313) Tag 8.6 35 0.0026 23.6 0.0 12 73-84 252-264 (313)
No 1
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=21.54 E-value=25 Score=21.30 Aligned_cols=23 Identities=30% Similarity=0.261 Sum_probs=18.6
Q ss_pred hhhhhhhhhhhhhhhhhHHHhhh
Q 032850 83 LGGIIVGTLGCVYAPQISKALAG 105 (132)
Q Consensus 83 lGG~V~G~LG~vfAPQIskaL~~ 105 (132)
|==+|.|+|..+..|++.+....
T Consensus 8 VViaIIgILaaia~P~~~~~~~~ 30 (158)
T d2pila_ 8 IVIAIVGILAAVALPAYQDYTAR 30 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33478899999999998888765
No 2
>g1kve.1 d.70.1.2 (A:,B:) SMK toxin {Halotolerant yeast (Pichia farinosa) [TaxId: 4920]}
Probab=19.21 E-value=14 Score=25.93 Aligned_cols=15 Identities=40% Similarity=0.922 Sum_probs=9.2
Q ss_pred hhhhhhhhhhhhhhh
Q 032850 83 LGGIIVGTLGCVYAP 97 (132)
Q Consensus 83 lGG~V~G~LG~vfAP 97 (132)
+||+.+|++||+.|-
T Consensus 25 fgglaggivgciaag 39 (140)
T g1kve.1 25 FGGLAGGIVGCIAAG 39 (140)
T ss_dssp GGGCCSHHHHHHHHH
T ss_pred cccccchhHHHHHHH
Confidence 466666666666553
No 3
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]}
Probab=18.38 E-value=9.5 Score=30.34 Aligned_cols=45 Identities=29% Similarity=0.543 Sum_probs=33.7
Q ss_pred hhhhhhhhhhhhhhhhhhHHHhhhhh---hhhHHHHhhCCCcccchhH
Q 032850 82 VLGGIIVGTLGCVYAPQISKALAGAA---ADRKDLMRKLPKFIYDEEK 126 (132)
Q Consensus 82 llGG~V~G~LG~vfAPQIskaL~~~~---~D~~~l~~~~~k~~yDeE~ 126 (132)
++|+.-.|..++.+-|+.=+...+.. -|..+|.+.....+||+||
T Consensus 179 ~iG~~~mGm~~~~~d~~~l~~~fGi~ve~iDm~El~rr~e~~i~D~eE 226 (355)
T d1fuia2 179 SLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAE 226 (355)
T ss_dssp EESSCSTTCGGGSCCHHHHHHHHCCEEEEECTHHHHHHHHTTCSCHHH
T ss_pred EECCccCCcccccCCHHHHHHHhCCceEEEcHHHHHHHHHccCCCHHH
Confidence 36777788889999888777665532 4778888877777889875
No 4
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=14.39 E-value=20 Score=25.73 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=17.7
Q ss_pred Ccccchhhhhhhhhhhhhhhhhhh
Q 032850 73 SAGFFVGGFVLGGIIVGTLGCVYA 96 (132)
Q Consensus 73 ~~G~FlaGfllGG~V~G~LG~vfA 96 (132)
+.+.|-+||++||.=+-+..|++-
T Consensus 113 gWs~F~~GF~~Gg~GGa~fAy~Ll 136 (151)
T d1jb0l_ 113 GWSQFTAGFFVGAMGSAFVAFFLL 136 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhhchhhhccccHHHHHHHHH
Confidence 467899999999876666665543
No 5
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]}
Probab=13.58 E-value=20 Score=25.65 Aligned_cols=14 Identities=36% Similarity=0.318 Sum_probs=9.7
Q ss_pred CCccc-chhhhhhhh
Q 032850 72 NSAGF-FVGGFVLGG 85 (132)
Q Consensus 72 g~~G~-FlaGfllGG 85 (132)
-|+|| |+|||+.|-
T Consensus 257 ~GAGDaf~ag~i~~~ 271 (319)
T d2ajra1 257 LGAGDAYVAGMVYYF 271 (319)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHH
Confidence 35665 889987663
No 6
>d1t5ja_ a.209.1.1 (A:) Hypothetical protein MJ1187 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=10.40 E-value=58 Score=22.62 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.5
Q ss_pred hhhhhhhhhhhhhhhhhhh
Q 032850 78 VGGFVLGGIIVGTLGCVYA 96 (132)
Q Consensus 78 laGfllGG~V~G~LG~vfA 96 (132)
+-|.++|.+|+-+||.-+-
T Consensus 8 ~~GallG~avGDAlG~p~e 26 (301)
T d1t5ja_ 8 ILGSVFGAVIGDALGMPTE 26 (301)
T ss_dssp HHHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHccchhc
Confidence 4688999999999997554
No 7
>d1kkga_ d.52.7.1 (A:) Ribosome-binding factor A, RbfA {Escherichia coli [TaxId: 562]}
Probab=10.16 E-value=35 Score=21.76 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=16.1
Q ss_pred hhhhhHHHhhhhhhhhHHHHhhCCC--cccchhHHhhhc
Q 032850 95 YAPQISKALAGAAADRKDLMRKLPK--FIYDEEKALENL 131 (132)
Q Consensus 95 fAPQIskaL~~~~~D~~~l~~~~~k--~~yDeE~~lEkT 131 (132)
.+++|++.|.. .=+ +|..|+ |+||+ ++|.+
T Consensus 75 ~~~~ir~~l~~--~l~---lr~~P~L~F~~D~--s~e~a 106 (108)
T d1kkga_ 75 ASGFIRSLLGK--AMR---LRIVPELTFFYDN--SLVEG 106 (108)
T ss_dssp THHHHHHHHHH--HTT---CSCCCEEEEEECC--TTSSS
T ss_pred HHHHHHHHHHh--hCC---CeECCEEEEEecC--chhhh
Confidence 34555665544 111 355565 66777 67764
No 8
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=9.82 E-value=34 Score=24.27 Aligned_cols=20 Identities=10% Similarity=0.320 Sum_probs=10.8
Q ss_pred hhhhhhhhhhhhhhhHHHhhh
Q 032850 85 GIIVGTLGCVYAPQISKALAG 105 (132)
Q Consensus 85 G~V~G~LG~vfAPQIskaL~~ 105 (132)
|.++|+++.++ |...++.++
T Consensus 23 g~~~~li~~lw-p~~~~~~W~ 42 (223)
T d1ciya3 23 GFVLGLVDIIW-GIFGPSQWD 42 (223)
T ss_dssp HHHHHHHHHTT-SCCSHHHHH
T ss_pred HHHHHHHHHHc-CCCCccHHH
Confidence 55556666654 554444444
No 9
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.97 E-value=63 Score=25.95 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=23.4
Q ss_pred cchhhhhh-----hhhhhhhhhhhhhhhhHHHhhh
Q 032850 76 FFVGGFVL-----GGIIVGTLGCVYAPQISKALAG 105 (132)
Q Consensus 76 ~FlaGfll-----GG~V~G~LG~vfAPQIskaL~~ 105 (132)
++.-|.++ |++++=++.|++++|-.|.+.+
T Consensus 430 DL~vG~laE~~~~g~~~GpT~~~ii~~qf~r~r~g 464 (511)
T d1cvua1 430 ELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMG 464 (511)
T ss_dssp CHHHHHHHSCCSTTCSSCHHHHHHHHHHHHHHHHT
T ss_pred hhhhchhccCcCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 45555544 7777789999999999998866
No 10
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]}
Probab=8.57 E-value=35 Score=23.55 Aligned_cols=12 Identities=25% Similarity=0.564 Sum_probs=0.0
Q ss_pred Cccc-chhhhhhh
Q 032850 73 SAGF-FVGGFVLG 84 (132)
Q Consensus 73 ~~G~-FlaGfllG 84 (132)
|||| |.|||+.+
T Consensus 252 GAGD~f~ag~i~~ 264 (313)
T d2f02a1 252 GSGDATIAGLAYG 264 (313)
T ss_dssp THHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Done!