Query 032854
Match_columns 132
No_of_seqs 108 out of 1158
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 10:43:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032854.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032854hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t3k_A Arath CDC25, dual-speci 100.0 5.1E-31 1.7E-35 175.4 7.4 126 3-129 25-151 (152)
2 3iwh_A Rhodanese-like domain p 100.0 3.2E-29 1.1E-33 156.7 5.2 101 5-119 1-102 (103)
3 3eme_A Rhodanese-like domain p 99.9 1.5E-28 5.2E-33 153.4 5.7 101 5-119 1-102 (103)
4 3gk5_A Uncharacterized rhodane 99.9 1.8E-28 6.2E-33 154.5 5.4 106 5-126 3-108 (108)
5 3foj_A Uncharacterized protein 99.9 1.8E-28 6.1E-33 152.4 5.0 99 5-117 1-100 (100)
6 1gmx_A GLPE protein; transfera 99.9 5.3E-28 1.8E-32 152.1 5.2 104 4-121 3-106 (108)
7 3hix_A ALR3790 protein; rhodan 99.9 2.4E-27 8.2E-32 148.8 4.4 103 11-125 1-105 (106)
8 1qxn_A SUD, sulfide dehydrogen 99.9 1.3E-26 4.5E-31 151.6 5.9 107 4-121 21-131 (137)
9 2hhg_A Hypothetical protein RP 99.9 6.4E-27 2.2E-31 153.0 4.3 110 4-122 20-136 (139)
10 3ilm_A ALR3790 protein; rhodan 99.9 5.6E-27 1.9E-31 154.1 3.8 104 7-122 1-106 (141)
11 3nhv_A BH2092 protein; alpha-b 99.9 3E-26 1E-30 151.1 4.7 107 6-125 16-126 (144)
12 1tq1_A AT5G66040, senescence-a 99.9 1.5E-26 5.1E-31 149.8 3.1 105 4-118 16-128 (129)
13 3flh_A Uncharacterized protein 99.9 9.8E-26 3.4E-30 145.1 6.3 103 6-121 15-121 (124)
14 1wv9_A Rhodanese homolog TT165 99.9 3.3E-26 1.1E-30 140.6 1.9 94 5-114 1-94 (94)
15 3d1p_A Putative thiosulfate su 99.9 1.6E-25 5.5E-30 146.5 4.9 107 4-119 21-138 (139)
16 2j6p_A SB(V)-AS(V) reductase; 99.9 1.9E-24 6.4E-29 143.6 9.3 110 4-119 3-122 (152)
17 2k0z_A Uncharacterized protein 99.9 1.5E-25 5.1E-30 141.5 2.8 102 5-122 4-105 (110)
18 3f4a_A Uncharacterized protein 99.9 3.9E-25 1.3E-29 149.3 4.3 112 4-120 29-159 (169)
19 3hzu_A Thiosulfate sulfurtrans 99.9 1.4E-23 4.7E-28 154.1 10.6 110 5-122 39-162 (318)
20 3i2v_A Adenylyltransferase and 99.9 7.8E-25 2.7E-29 140.8 3.3 106 6-116 1-122 (127)
21 1e0c_A Rhodanese, sulfurtransf 99.9 9.7E-24 3.3E-28 151.4 9.0 112 5-124 8-134 (271)
22 1urh_A 3-mercaptopyruvate sulf 99.9 1.8E-23 6.3E-28 150.7 10.1 111 6-124 4-139 (280)
23 2fsx_A RV0390, COG0607: rhodan 99.9 3.8E-24 1.3E-28 141.4 5.7 109 5-122 4-142 (148)
24 2vsw_A Dual specificity protei 99.9 4.6E-24 1.6E-28 141.5 5.5 119 5-126 3-140 (153)
25 1c25_A CDC25A; hydrolase, cell 99.9 2.7E-24 9.2E-29 143.8 4.1 127 4-132 21-159 (161)
26 3g5j_A Putative ATP/GTP bindin 99.9 1.1E-23 3.6E-28 136.4 6.7 98 3-113 2-130 (134)
27 3aay_A Putative thiosulfate su 99.9 1.7E-23 5.9E-28 150.5 7.1 112 4-123 4-129 (277)
28 1uar_A Rhodanese; sulfurtransf 99.9 2.2E-23 7.6E-28 150.5 7.1 112 4-123 6-131 (285)
29 1vee_A Proline-rich protein fa 99.9 3.6E-23 1.2E-27 134.7 6.8 113 4-125 3-130 (134)
30 1qb0_A Protein (M-phase induce 99.9 2.5E-23 8.5E-28 144.9 6.1 115 4-120 42-170 (211)
31 2ouc_A Dual specificity protei 99.9 8.5E-24 2.9E-28 138.0 3.1 110 7-121 2-140 (142)
32 2a2k_A M-phase inducer phospha 99.9 2E-23 6.7E-28 141.4 4.7 116 4-121 22-151 (175)
33 4f67_A UPF0176 protein LPG2838 99.9 9.6E-23 3.3E-27 146.0 7.1 104 4-116 120-225 (265)
34 1e0c_A Rhodanese, sulfurtransf 99.9 1.7E-22 5.7E-27 145.0 8.3 105 6-119 147-271 (271)
35 1yt8_A Thiosulfate sulfurtrans 99.9 7.8E-23 2.7E-27 159.2 6.1 110 4-124 5-115 (539)
36 1rhs_A Sulfur-substituted rhod 99.9 3.2E-22 1.1E-26 145.3 8.5 112 5-124 7-147 (296)
37 2jtq_A Phage shock protein E; 99.9 8.8E-23 3E-27 123.0 4.5 84 21-119 1-84 (85)
38 3olh_A MST, 3-mercaptopyruvate 99.9 5.8E-22 2E-26 144.6 9.4 111 5-123 21-161 (302)
39 1urh_A 3-mercaptopyruvate sulf 99.9 1.8E-22 6E-27 145.5 5.7 106 6-120 152-279 (280)
40 3op3_A M-phase inducer phospha 99.9 1.5E-22 5.2E-27 141.3 5.0 116 4-120 55-183 (216)
41 1rhs_A Sulfur-substituted rhod 99.9 4E-22 1.4E-26 144.9 7.1 108 6-122 160-291 (296)
42 1yt8_A Thiosulfate sulfurtrans 99.9 7.5E-22 2.6E-26 153.7 8.4 107 4-123 375-481 (539)
43 1hzm_A Dual specificity protei 99.8 2.6E-22 8.7E-27 133.1 2.7 108 4-118 14-146 (154)
44 1uar_A Rhodanese; sulfurtransf 99.8 1.6E-21 5.3E-26 140.8 6.6 108 6-121 146-284 (285)
45 3tp9_A Beta-lactamase and rhod 99.8 6.3E-22 2.2E-26 151.8 3.5 102 5-119 373-474 (474)
46 2wlr_A Putative thiosulfate su 99.8 5.5E-21 1.9E-25 145.0 7.2 113 6-127 272-414 (423)
47 3hzu_A Thiosulfate sulfurtrans 99.8 2.2E-21 7.6E-26 142.4 4.7 107 6-123 179-312 (318)
48 3olh_A MST, 3-mercaptopyruvate 99.8 2.9E-21 1E-25 140.8 5.1 103 6-117 175-299 (302)
49 1okg_A Possible 3-mercaptopyru 99.8 1.6E-20 5.4E-25 140.5 8.5 108 5-124 13-148 (373)
50 3aay_A Putative thiosulfate su 99.8 5E-21 1.7E-25 137.6 5.6 103 8-120 146-276 (277)
51 2eg4_A Probable thiosulfate su 99.8 1.2E-20 4.3E-25 132.5 6.0 97 6-119 121-230 (230)
52 1whb_A KIAA0055; deubiqutinati 99.8 2.1E-20 7.1E-25 124.6 6.0 118 4-123 13-150 (157)
53 2gwf_A Ubiquitin carboxyl-term 99.8 3.4E-20 1.2E-24 123.7 6.7 116 4-121 18-153 (157)
54 2wlr_A Putative thiosulfate su 99.8 6.2E-20 2.1E-24 139.2 7.8 108 6-122 124-253 (423)
55 3tg1_B Dual specificity protei 99.8 2.8E-20 9.5E-25 124.1 4.9 107 4-115 9-144 (158)
56 3ntd_A FAD-dependent pyridine 99.8 7.8E-20 2.7E-24 142.3 4.0 95 4-114 471-565 (565)
57 3ics_A Coenzyme A-disulfide re 99.7 2.2E-19 7.4E-24 140.7 2.2 96 4-114 487-582 (588)
58 1okg_A Possible 3-mercaptopyru 99.7 5E-19 1.7E-23 132.4 3.0 93 19-120 172-295 (373)
59 2eg4_A Probable thiosulfate su 99.7 2.4E-18 8.3E-23 120.8 6.3 90 19-122 4-106 (230)
60 3r2u_A Metallo-beta-lactamase 99.7 4.2E-19 1.4E-23 136.1 0.0 87 13-112 379-465 (466)
61 3tp9_A Beta-lactamase and rhod 99.7 5.6E-18 1.9E-22 129.9 4.5 103 4-121 271-374 (474)
62 3utn_X Thiosulfate sulfurtrans 99.7 6.6E-17 2.2E-21 119.0 9.6 109 5-122 27-163 (327)
63 3utn_X Thiosulfate sulfurtrans 99.6 5.8E-16 2E-20 113.9 5.3 101 7-116 185-319 (327)
64 3r2u_A Metallo-beta-lactamase 99.3 7.5E-13 2.6E-17 101.4 1.7 80 19-111 294-375 (466)
65 2f46_A Hypothetical protein; s 97.9 6.7E-06 2.3E-10 54.0 3.5 71 7-78 29-116 (156)
66 4erc_A Dual specificity protei 94.3 0.19 6.4E-06 31.7 6.7 70 9-78 24-103 (150)
67 1v8c_A MOAD related protein; r 93.8 0.0051 1.7E-07 40.9 -1.6 25 22-50 122-146 (168)
68 2img_A Dual specificity protei 93.5 0.38 1.3E-05 30.2 7.0 71 9-79 25-105 (151)
69 1xri_A AT1G05000; structural g 88.6 0.67 2.3E-05 29.2 4.3 73 8-80 21-109 (151)
70 2hcm_A Dual specificity protei 88.1 1.9 6.6E-05 27.5 6.4 18 61-78 87-104 (164)
71 2nt2_A Protein phosphatase sli 87.3 1.2 4E-05 27.9 4.9 18 61-78 79-96 (145)
72 3ezz_A Dual specificity protei 86.5 1.5 5.2E-05 27.3 5.1 18 61-78 79-96 (144)
73 3rgo_A Protein-tyrosine phosph 85.6 2.3 7.7E-05 26.7 5.6 20 61-80 87-106 (157)
74 1yz4_A DUSP15, dual specificit 85.1 1.9 6.4E-05 27.5 5.1 19 61-79 82-100 (160)
75 1ywf_A Phosphotyrosine protein 84.9 0.6 2E-05 33.5 2.8 28 5-32 53-80 (296)
76 3s4e_A Dual specificity protei 84.8 2.9 0.0001 26.0 5.8 19 61-79 79-97 (144)
77 3rof_A Low molecular weight pr 83.9 1.5 5.3E-05 28.4 4.2 44 64-111 7-50 (158)
78 2esb_A Dual specificity protei 83.4 5.4 0.00018 26.2 6.9 19 61-79 95-113 (188)
79 1wrm_A Dual specificity phosph 83.3 2.7 9.4E-05 26.9 5.3 19 61-79 81-99 (165)
80 2cwd_A Low molecular weight ph 81.5 2.1 7.2E-05 27.7 4.2 45 63-111 4-49 (161)
81 2q05_A Late protein H1, dual s 81.3 4.3 0.00015 26.9 5.8 20 61-80 123-142 (195)
82 3s4o_A Protein tyrosine phosph 81.2 7.9 0.00027 24.3 7.2 18 62-79 108-125 (167)
83 3n8i_A Low molecular weight ph 80.0 2.6 9E-05 27.2 4.2 44 63-110 5-49 (157)
84 3f81_A Dual specificity protei 79.8 7.4 0.00025 25.1 6.5 17 63-79 115-131 (183)
85 2gi4_A Possible phosphotyrosin 79.1 2.1 7.2E-05 27.6 3.5 42 65-110 3-45 (156)
86 1u2p_A Ptpase, low molecular w 78.0 2.8 9.4E-05 27.1 3.9 43 64-110 5-48 (163)
87 3rz2_A Protein tyrosine phosph 77.9 12 0.00041 24.4 7.8 73 8-80 48-134 (189)
88 3jvi_A Protein tyrosine phosph 77.8 3.2 0.00011 26.9 4.2 43 64-110 5-48 (161)
89 3cm3_A Late protein H1, dual s 77.7 4.9 0.00017 26.0 5.1 19 62-80 107-125 (176)
90 1d1q_A Tyrosine phosphatase (E 77.2 3.5 0.00012 26.6 4.2 43 64-110 8-52 (161)
91 2j16_A SDP-1, tyrosine-protein 76.6 13 0.00046 24.3 7.5 20 61-80 115-134 (182)
92 1fpz_A Cyclin-dependent kinase 74.1 7.8 0.00027 25.8 5.5 19 61-79 131-149 (212)
93 1yn9_A BVP, polynucleotide 5'- 73.8 12 0.00039 23.9 6.1 17 62-78 112-128 (169)
94 2wgp_A Dual specificity protei 73.5 11 0.00036 24.8 6.0 18 61-78 101-118 (190)
95 1tvm_A PTS system, galactitol- 73.4 5.2 0.00018 24.2 4.0 31 64-98 22-52 (113)
96 2g6z_A Dual specificity protei 73.1 10 0.00035 25.6 5.8 18 61-78 81-98 (211)
97 4etn_A LMPTP, low molecular we 70.9 5.8 0.0002 26.3 4.1 44 63-111 34-77 (184)
98 2jgn_A DBX, DDX3, ATP-dependen 70.4 19 0.00065 23.3 7.0 47 52-108 35-81 (185)
99 1rxd_A Protein tyrosine phosph 69.0 18 0.0006 22.4 7.5 76 5-80 24-113 (159)
100 3emu_A Leucine rich repeat and 68.0 14 0.00049 23.4 5.5 20 61-80 85-104 (161)
101 3czc_A RMPB; alpha/beta sandwi 66.1 8.7 0.0003 23.0 3.9 31 64-98 19-49 (110)
102 1vkr_A Mannitol-specific PTS s 65.8 5.8 0.0002 24.6 3.1 32 62-97 12-43 (125)
103 2l2q_A PTS system, cellobiose- 65.5 9.7 0.00033 22.7 4.0 30 64-98 5-34 (109)
104 3gxh_A Putative phosphatase (D 65.0 22 0.00075 22.4 5.9 27 6-32 26-52 (157)
105 4etm_A LMPTP, low molecular we 63.7 10 0.00034 24.8 4.1 43 65-111 20-63 (173)
106 1e2b_A Enzyme IIB-cellobiose; 63.6 13 0.00043 22.2 4.3 30 64-98 4-33 (106)
107 2hxp_A Dual specificity protei 63.3 9.6 0.00033 24.0 3.9 19 61-79 83-101 (155)
108 1zzw_A Dual specificity protei 61.6 11 0.00037 23.4 3.9 19 61-79 81-99 (149)
109 4fak_A Ribosomal RNA large sub 61.3 12 0.0004 24.5 4.0 56 52-112 63-119 (163)
110 2r0b_A Serine/threonine/tyrosi 61.3 11 0.00036 23.5 3.8 19 61-79 88-106 (154)
111 3v0d_A Voltage-sensor containi 59.7 47 0.0016 24.1 7.7 68 9-76 51-132 (339)
112 4egs_A Ribose 5-phosphate isom 58.3 11 0.00039 24.7 3.7 43 63-110 34-76 (180)
113 1jzt_A Hypothetical 27.5 kDa p 57.6 43 0.0015 23.1 6.7 32 64-102 59-90 (246)
114 2y96_A Dual specificity phosph 57.0 30 0.001 23.2 5.8 19 61-79 137-155 (219)
115 1ohe_A CDC14B, CDC14B2 phospha 56.8 20 0.00068 26.2 5.1 68 10-78 207-284 (348)
116 2e0t_A Dual specificity phosph 54.3 19 0.00064 22.2 4.1 17 62-78 84-100 (151)
117 2rb4_A ATP-dependent RNA helic 53.7 26 0.00089 22.2 4.8 37 62-108 33-69 (175)
118 2oud_A Dual specificity protei 53.3 17 0.00059 23.3 3.9 19 61-79 85-103 (177)
119 2i4i_A ATP-dependent RNA helic 53.1 54 0.0018 23.5 6.9 47 52-108 265-311 (417)
120 3d3k_A Enhancer of mRNA-decapp 51.6 29 0.00098 24.2 5.0 33 64-103 86-118 (259)
121 2hjv_A ATP-dependent RNA helic 50.3 30 0.001 21.6 4.7 45 53-108 26-70 (163)
122 3d3j_A Enhancer of mRNA-decapp 49.8 30 0.001 24.7 5.0 33 64-103 133-165 (306)
123 2o8n_A APOA-I binding protein; 49.4 31 0.0011 24.2 4.9 33 64-103 80-112 (265)
124 1to0_A Hypothetical UPF0247 pr 47.9 17 0.00057 23.8 3.1 56 52-112 59-115 (167)
125 2pq5_A Dual specificity protei 46.0 25 0.00086 23.2 3.9 18 62-79 130-147 (205)
126 3rss_A Putative uncharacterize 42.6 62 0.0021 24.9 6.0 50 62-118 51-110 (502)
127 2zxr_A Single-stranded DNA spe 42.4 62 0.0021 25.9 6.1 58 44-106 53-110 (666)
128 1t5i_A C_terminal domain of A 42.3 63 0.0021 20.4 6.8 45 53-108 22-66 (172)
129 2v1x_A ATP-dependent DNA helic 42.1 1.2E+02 0.004 23.7 7.6 37 62-108 266-302 (591)
130 1fuk_A Eukaryotic initiation f 42.0 61 0.0021 20.1 6.3 46 52-108 20-65 (165)
131 3eaq_A Heat resistant RNA depe 40.9 74 0.0025 20.8 6.6 37 62-108 30-66 (212)
132 3mmj_A MYO-inositol hexaphosph 39.2 29 0.00098 25.1 3.4 25 54-78 204-228 (314)
133 2c46_A MRNA capping enzyme; ph 38.3 38 0.0013 23.2 3.9 71 8-78 67-156 (241)
134 2obn_A Hypothetical protein; s 34.2 1E+02 0.0035 22.5 5.8 81 9-113 116-197 (349)
135 2p6n_A ATP-dependent RNA helic 34.1 94 0.0032 20.0 6.0 36 63-108 54-89 (191)
136 4ao9_A Beta-phenylalanine amin 33.0 67 0.0023 24.2 4.8 55 52-113 131-185 (454)
137 1pp7_U 39 kDa initiator bindin 32.3 9.2 0.00032 23.8 -0.1 32 91-122 86-117 (131)
138 3r4v_A Putative uncharacterize 31.7 87 0.003 22.6 4.9 49 53-105 71-119 (315)
139 3nme_A Ptpkis1 protein, SEX4 g 31.5 40 0.0014 23.8 3.2 18 62-79 105-122 (294)
140 1p8a_A Protein tyrosine phosph 30.9 11 0.00039 23.7 0.2 39 64-110 5-43 (146)
141 2i6j_A Ssoptp, sulfolobus solf 30.8 66 0.0023 19.7 3.9 23 10-32 18-40 (161)
142 2r4q_A Phosphotransferase syst 30.1 87 0.003 18.7 4.1 33 65-102 6-38 (106)
143 1jl3_A Arsenate reductase; alp 29.5 53 0.0018 20.2 3.2 38 64-109 4-41 (139)
144 1o6d_A Hypothetical UPF0247 pr 29.1 61 0.0021 21.0 3.5 86 11-113 22-110 (163)
145 3i32_A Heat resistant RNA depe 28.1 1.6E+02 0.0054 20.7 8.9 46 52-108 18-63 (300)
146 3n0a_A Tyrosine-protein phosph 27.9 1.8E+02 0.0061 21.3 7.8 65 11-77 50-129 (361)
147 1oyw_A RECQ helicase, ATP-depe 27.3 1.8E+02 0.0063 22.0 6.4 37 62-108 235-271 (523)
148 2kyr_A Fructose-like phosphotr 27.2 58 0.002 19.7 2.9 33 66-103 10-42 (111)
149 3nbm_A PTS system, lactose-spe 27.1 74 0.0025 18.9 3.4 36 62-103 5-40 (108)
150 4grz_A Tyrosine-protein phosph 26.8 55 0.0019 22.8 3.2 18 60-77 203-220 (288)
151 4ea9_A Perosamine N-acetyltran 26.7 59 0.002 21.4 3.2 48 62-119 11-58 (220)
152 1fpr_A Protein-tyrosine phosph 26.5 1.1E+02 0.0037 21.3 4.7 18 61-78 202-219 (284)
153 2l17_A Synarsc, arsenate reduc 26.4 67 0.0023 19.7 3.3 36 65-108 6-41 (134)
154 3edo_A Flavoprotein, putative 26.2 63 0.0021 20.0 3.1 55 53-111 95-150 (151)
155 1ns5_A Hypothetical protein YB 26.1 1.2E+02 0.004 19.4 4.4 87 11-112 21-110 (155)
156 2pfu_A Biopolymer transport EX 25.9 95 0.0033 17.5 4.5 54 44-104 39-92 (99)
157 3to5_A CHEY homolog; alpha(5)b 25.7 1.2E+02 0.004 18.5 5.5 42 61-111 10-51 (134)
158 2b49_A Protein tyrosine phosph 25.6 61 0.0021 22.7 3.2 18 61-78 207-224 (287)
159 2m1z_A LMO0427 protein; homolo 25.1 65 0.0022 19.3 2.9 35 67-106 8-42 (106)
160 1jf8_A Arsenate reductase; ptp 24.8 88 0.003 19.0 3.6 38 64-109 4-41 (131)
161 1o1x_A Ribose-5-phosphate isom 24.6 1.4E+02 0.0049 19.1 4.7 53 12-74 29-81 (155)
162 2yxb_A Coenzyme B12-dependent 24.5 1.4E+02 0.0047 18.9 4.7 38 65-107 71-108 (161)
163 1y80_A Predicted cobalamin bin 24.4 1.3E+02 0.0044 19.7 4.6 36 63-104 88-123 (210)
164 2hc1_A Receptor-type tyrosine- 24.2 67 0.0023 22.5 3.3 17 61-77 216-232 (291)
165 3b7o_A Tyrosine-protein phosph 24.1 1.7E+02 0.0058 20.7 5.4 18 61-78 237-254 (316)
166 2r48_A Phosphotransferase syst 24.0 87 0.003 18.7 3.3 32 66-102 7-38 (106)
167 3rh0_A Arsenate reductase; oxi 24.0 76 0.0026 20.0 3.2 38 63-108 20-57 (148)
168 1ccw_A Protein (glutamate muta 23.9 1.3E+02 0.0045 18.3 4.6 23 81-107 71-93 (137)
169 3i5x_A ATP-dependent RNA helic 23.8 2.3E+02 0.008 21.3 6.6 41 61-108 337-377 (563)
170 1j26_A Immature colon carcinom 23.5 91 0.0031 18.8 3.3 19 60-80 72-90 (112)
171 4h4g_A (3R)-hydroxymyristoyl-[ 23.4 70 0.0024 20.3 3.0 46 6-51 11-73 (160)
172 3pey_A ATP-dependent RNA helic 23.1 1.2E+02 0.0041 21.2 4.5 37 62-108 242-278 (395)
173 4a69_A Histone deacetylase 3,; 23.0 2E+02 0.0068 21.2 5.7 16 93-108 284-299 (376)
174 1v7z_A Creatininase, creatinin 22.9 1.9E+02 0.0065 19.9 5.8 38 37-74 83-122 (260)
175 3qyf_A Crispr-associated prote 22.2 1.5E+02 0.0052 21.5 4.8 37 66-108 161-197 (324)
176 2i2x_B MTAC, methyltransferase 22.1 1.7E+02 0.0059 19.9 5.0 35 63-103 123-157 (258)
177 1s2m_A Putative ATP-dependent 22.1 1.4E+02 0.0047 21.2 4.7 37 62-108 257-293 (400)
178 1wp9_A ATP-dependent RNA helic 22.1 2.2E+02 0.0075 20.3 6.7 35 61-105 359-393 (494)
179 1xti_A Probable ATP-dependent 22.0 2.1E+02 0.0071 20.0 7.2 46 52-108 240-285 (391)
180 1d5r_A Phosphoinositide phosph 21.8 2.2E+02 0.0075 20.2 7.3 16 62-77 110-125 (324)
181 3no4_A Creatininase, creatinin 21.1 2.2E+02 0.0074 19.9 8.3 39 36-74 91-131 (267)
182 3i36_A Vascular protein tyrosi 20.9 55 0.0019 23.6 2.3 17 61-77 235-251 (342)
183 1hv8_A Putative ATP-dependent 20.7 1.7E+02 0.0056 20.2 4.8 37 62-108 237-273 (367)
184 3fht_A ATP-dependent RNA helic 20.6 2.3E+02 0.0078 19.9 6.5 36 62-107 265-300 (412)
185 3ono_A Ribose/galactose isomer 20.4 2.1E+02 0.0071 19.4 4.9 54 12-74 24-78 (214)
186 2j0s_A ATP-dependent RNA helic 20.3 1.5E+02 0.0052 21.0 4.6 37 62-108 275-311 (410)
187 3sho_A Transcriptional regulat 20.3 1.7E+02 0.0058 18.3 6.4 44 53-104 29-72 (187)
188 3max_A HD2, histone deacetylas 20.1 2.5E+02 0.0087 20.6 5.7 16 93-108 283-298 (367)
No 1
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.97 E-value=5.1e-31 Score=175.41 Aligned_cols=126 Identities=72% Similarity=1.240 Sum_probs=107.9
Q ss_pred CCcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcC-CCCCCcHHHH
Q 032854 3 RSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCA-LSQVRGPTCA 81 (132)
Q Consensus 3 ~~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~-~g~~~~~~~a 81 (132)
+.+..|+++++.+++++++.+|||+|++.+|..||||||+|+|...+...+.++...++++++||+||. +|. ++..++
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~-rs~~aa 103 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQV-RGPTCA 103 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSS-SHHHHH
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCc-chHHHH
Confidence 467889999999988877899999999999999999999999999988877777666678899999999 765 777777
Q ss_pred HHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCcccccc
Q 032854 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCKEEN 129 (132)
Q Consensus 82 ~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~~~~ 129 (132)
..|...|...|+..||++|++|+||+.+|.++|+|+++....+|++.|
T Consensus 104 ~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~c~~~~ 151 (152)
T 1t3k_A 104 RRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPCKGDC 151 (152)
T ss_dssp HHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSCSSCSSCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCCCCCCCCC
Confidence 655443433335589999999999999999999999999999999877
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.95 E-value=3.2e-29 Score=156.74 Aligned_cols=101 Identities=23% Similarity=0.434 Sum_probs=84.5
Q ss_pred cccccHHHHHhhhC-CCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 5 ~~~is~~~~~~~~~-~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
++.||++|+.+.+. +++++|||+|++.||..||||||+|+|...|.+.+..+ +++++||+||.+|. ++..++
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~ivv~C~~G~-rS~~aa-- 73 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSF----NKNEIYYIVCAGGV-RSAKVV-- 73 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGC----CTTSEEEEECSSSS-HHHHHH--
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhhhh----cCCCeEEEECCCCH-HHHHHH--
Confidence 46799999998775 55789999999999999999999999999887766554 78999999999886 665555
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
..|++ .||+++ .|.||+.+|..+|+|+++
T Consensus 74 --~~L~~----~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 74 --EYLEA----NGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp --HHHHT----TTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred --HHHHH----cCCCEE-EecChHHHHHHCCCccee
Confidence 44544 999655 699999999999999975
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.95 E-value=1.5e-28 Score=153.44 Aligned_cols=101 Identities=23% Similarity=0.421 Sum_probs=85.6
Q ss_pred cccccHHHHHhhh-CCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 5 ISYISGSQLLSLK-RRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 5 ~~~is~~~~~~~~-~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
++.||++++.+++ .+++.+|||+|++.||..||||||+|+|...+...+..+ +++++||+||.+|. ++..++
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~iv~yC~~g~-rs~~a~-- 73 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSF----NKNEIYYIVCAGGV-RSAKVV-- 73 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGC----CTTSEEEEECSSSS-HHHHHH--
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhC----CCCCeEEEECCCCh-HHHHHH--
Confidence 4679999999988 456789999999999999999999999999887665544 78899999999885 555554
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
..|++ .|| +|++|.||+.+|..+|+|+++
T Consensus 74 --~~L~~----~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 74 --EYLEA----NGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp --HHHHT----TTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred --HHHHH----CCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 44544 999 999999999999999999875
No 4
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.95 E-value=1.8e-28 Score=154.46 Aligned_cols=106 Identities=22% Similarity=0.356 Sum_probs=85.2
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHH
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l 84 (132)
++.|+++++.+++.. .+|||+|++.||..||||||+|+|...+.+.+.. ++++++||+||.+|. ++..++
T Consensus 3 ~~~is~~el~~~l~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~----l~~~~~ivvyC~~G~-rs~~aa--- 72 (108)
T 3gk5_A 3 YRSINAADLYENIKA--YTVLDVREPFELIFGSIANSINIPISELREKWKI----LERDKKYAVICAHGN-RSAAAV--- 72 (108)
T ss_dssp CCEECHHHHHHTTTT--CEEEECSCHHHHTTCBCTTCEECCHHHHHHHGGG----SCTTSCEEEECSSSH-HHHHHH---
T ss_pred ccEeCHHHHHHHHcC--CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHh----CCCCCeEEEEcCCCc-HHHHHH---
Confidence 578999999999875 8999999999999999999999998777655444 378899999998775 454444
Q ss_pred HHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCccc
Q 032854 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCK 126 (132)
Q Consensus 85 ~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~ 126 (132)
..|++ .|| +|++|+||+.+|.++++|++++...|.|
T Consensus 73 -~~L~~----~G~-~v~~l~GG~~~W~~~~~~~~~~~~~~~~ 108 (108)
T 3gk5_A 73 -EFLSQ----LGL-NIVDVEGGIQSWIEEGYPVVLEHHHHHH 108 (108)
T ss_dssp -HHHHT----TTC-CEEEETTHHHHHHHTTCCCBCC------
T ss_pred -HHHHH----cCC-CEEEEcCcHHHHHHcCCCCCCCCCCcCC
Confidence 45544 999 9999999999999999999998887754
No 5
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.95 E-value=1.8e-28 Score=152.40 Aligned_cols=99 Identities=21% Similarity=0.385 Sum_probs=83.7
Q ss_pred cccccHHHHHhhhC-CCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 5 ~~~is~~~~~~~~~-~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
++.||++++.+++. +++.+|||+|++.||..||||||+|+|...+.+.+..+ +++++||+||.+|. ++..++
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~ivvyC~~g~-rs~~a~-- 73 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYF----NDNETYYIICKAGG-RSAQVV-- 73 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGS----CTTSEEEEECSSSH-HHHHHH--
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhC----CCCCcEEEEcCCCc-hHHHHH--
Confidence 46799999999884 56799999999999999999999999999887665544 78899999999874 554444
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcCCCc
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPV 117 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~ 117 (132)
..|++ .|| +|++|+||+.+|.++|+|+
T Consensus 74 --~~L~~----~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 74 --QYLEQ----NGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp --HHHHT----TTC-EEEEETTHHHHHCSSSCBC
T ss_pred --HHHHH----CCC-CEEEecccHHHHHHcCCCC
Confidence 45544 999 9999999999999999986
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.94 E-value=5.3e-28 Score=152.15 Aligned_cols=104 Identities=17% Similarity=0.338 Sum_probs=87.9
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
.++.|+++++.+++.+++.+|||+|++.||..||||||+|+|...+..++.. ++++++||+||.+|. ++..++
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~----l~~~~~ivvyc~~g~-rs~~a~-- 75 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRD----NDFDTPVMVMCYHGN-SSKGAA-- 75 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHHHHHHHHHH----SCTTSCEEEECSSSS-HHHHHH--
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHHHh----cCCCCCEEEEcCCCc-hHHHHH--
Confidence 3678999999999886678999999999999999999999998877665554 478899999999886 555554
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
..|++ .||++|++|+||+.+|..+ +|++++.
T Consensus 76 --~~L~~----~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 76 --QYLLQ----QGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp --HHHHH----HTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred --HHHHH----cCCceEEEecCCHHHHHHh-CCccccc
Confidence 44544 8999999999999999999 9998754
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.93 E-value=2.4e-27 Score=148.80 Aligned_cols=103 Identities=23% Similarity=0.378 Sum_probs=77.1
Q ss_pred HHHHhhhC--CCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHH
Q 032854 11 SQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYL 88 (132)
Q Consensus 11 ~~~~~~~~--~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L 88 (132)
+|+.+++. .++++|||+|++.+|..||||||+|+|...+...+. ..++++++||+||.+|. ++..++ ..|
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~l~~~~~ivvyc~~g~-rs~~a~----~~L 72 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SSLEKSRDIYVYGAGDE-QTSQAV----NLL 72 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHH---HHSCTTSCEEEECSSHH-HHHHHH----HHH
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHH---hcCCCCCeEEEEECCCC-hHHHHH----HHH
Confidence 35677776 346899999999999999999999999988766542 23478899999998775 444443 455
Q ss_pred HHHhhhcCCccEEEeccchhhhhhcCCCccccCCCcc
Q 032854 89 DEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPC 125 (132)
Q Consensus 89 ~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (132)
+. .||++|++|+||+.+|.++|+|+++...+|.
T Consensus 73 ~~----~G~~~v~~l~GG~~~W~~~g~~~~~~~~~~~ 105 (106)
T 3hix_A 73 RS----AGFEHVSELKGGLAAWKAIGGPTELEHHHHH 105 (106)
T ss_dssp HH----TTCSCEEECTTHHHHHHHTTCCEEECCEEEC
T ss_pred HH----cCCcCEEEecCCHHHHHHCCCCCCCCCCCCC
Confidence 44 9999999999999999999999998877654
No 8
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.93 E-value=1.3e-26 Score=151.61 Aligned_cols=107 Identities=21% Similarity=0.378 Sum_probs=89.0
Q ss_pred CcccccHHHHHhhhC-CCCeEEEeeCCCCCcCC-Cc--cCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHH
Q 032854 4 SISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GH--ITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 4 ~~~~is~~~~~~~~~-~~~~~liD~R~~~e~~~-~h--I~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~ 79 (132)
.+..|+++++.+++. +++.+|||+|++.||.. || ||||+|+|...+... ..+..++++++||+||.+|. ++..
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~--~~~~~l~~~~~ivvyC~~G~-rS~~ 97 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPL--LAKSGLDPEKPVVVFCKTAA-RAAL 97 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHH--HHHHCCCTTSCEEEECCSSS-CHHH
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhH--HhhccCCCCCeEEEEcCCCc-HHHH
Confidence 467899999999987 66799999999999999 99 999999999887651 11233478899999999886 6655
Q ss_pred HHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 80 CAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 80 ~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
++ ..|++ .||++|++|+||+.+|..+|+|++.+.
T Consensus 98 aa----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~ 131 (137)
T 1qxn_A 98 AG----KTLRE----YGFKTIYNSEGGMDKWLEEGLPSLDRS 131 (137)
T ss_dssp HH----HHHHH----HTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred HH----HHHHH----cCCcceEEEcCcHHHHHHCCCCccccc
Confidence 55 44544 899999999999999999999998654
No 9
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=6.4e-27 Score=153.03 Aligned_cols=110 Identities=22% Similarity=0.403 Sum_probs=86.1
Q ss_pred CcccccHHHHHhhhC--CCCeEEEeeCCCCCcCC-CccCCccccCccchhHHHHHH----HHHhcCCCEEEEEcCCCCCC
Q 032854 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYD-GHITGSLHYPSDSFTDKIFDL----IQEVRGKDTLVFHCALSQVR 76 (132)
Q Consensus 4 ~~~~is~~~~~~~~~--~~~~~liD~R~~~e~~~-~hI~gai~ip~~~~~~~~~~~----~~~~~~~~~ivv~c~~g~~~ 76 (132)
.+..|+++++.+++. +++.+|||+|++.||.. ||||||+|+|...+...+... ...++++++||+||.+|. +
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~-r 98 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGL-R 98 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSH-H
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCCh-H
Confidence 357899999999987 56799999999999999 999999999998776543211 112367899999999875 5
Q ss_pred cHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 77 GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 77 ~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
+..++ ..|++ .||++|++|+||+.+|..+|+|++++..
T Consensus 99 s~~a~----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 99 SALAA----KTAQD----MGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp HHHHH----HHHHH----HTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred HHHHH----HHHHH----cCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 54443 45544 8999999999999999999999987643
No 10
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.93 E-value=5.6e-27 Score=154.11 Aligned_cols=104 Identities=23% Similarity=0.399 Sum_probs=85.0
Q ss_pred cccHHHHHhhhCC--CCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHH
Q 032854 7 YISGSQLLSLKRR--PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (132)
Q Consensus 7 ~is~~~~~~~~~~--~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l 84 (132)
.||++++.+++.. ++++|||+|++.+|..||||||+|+|...+...+. ..++++++||+||.+|. ++..++
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~l~~~~~ivvyC~~g~-rs~~aa--- 73 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SSLEKSRDIYVYGAGDE-QTSQAV--- 73 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHH---TTSCTTSEEEEECSSHH-HHHHHH---
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHHH---hcCCCCCeEEEEECCCh-HHHHHH---
Confidence 3899999998873 35899999999999999999999999988766543 23478899999999764 444443
Q ss_pred HHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 85 ~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
..|+. .||++|++|+||+.+|.++|+|++++..
T Consensus 74 -~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 74 -NLLRS----AGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp -HHHHH----TTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred -HHHHH----cCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 45544 9999999999999999999999998864
No 11
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.92 E-value=3e-26 Score=151.12 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=87.5
Q ss_pred ccccHHHHHhhhCCC--CeEEEeeCCCCCcCCCccCCccccCccchhH-HHHHHHHHhcCCCEEEEEcCCCC-CCcHHHH
Q 032854 6 SYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLIQEVRGKDTLVFHCALSQ-VRGPTCA 81 (132)
Q Consensus 6 ~~is~~~~~~~~~~~--~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-~~~~~~~~~~~~~~ivv~c~~g~-~~~~~~a 81 (132)
..||++++.+++..+ +++|||+|++.+|..||||||+|+|...+.. .+. .++++++||+||.+|. .++..++
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~----~l~~~~~ivvyC~~g~~~rs~~aa 91 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK----RLSKEKVIITYCWGPACNGATKAA 91 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTTT----TCCTTSEEEEECSCTTCCHHHHHH
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHHh----hCCCCCeEEEEECCCCccHHHHHH
Confidence 458999999988754 7999999999999999999999999988763 333 3468899999999874 3555554
Q ss_pred HHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCcc
Q 032854 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPC 125 (132)
Q Consensus 82 ~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (132)
..|+. .|| +|++|+||+.+|..+|+|++++...+.
T Consensus 92 ----~~L~~----~G~-~v~~l~GG~~~W~~~g~pv~~~~~~~~ 126 (144)
T 3nhv_A 92 ----AKFAQ----LGF-RVKELIGGIEYWRKENGEVEGTLGAKA 126 (144)
T ss_dssp ----HHHHH----TTC-EEEEEESHHHHHHHTTCCCBSSSGGGS
T ss_pred ----HHHHH----CCC-eEEEeCCcHHHHHHCCCCccCCCCCCc
Confidence 45544 999 699999999999999999998866443
No 12
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.92 E-value=1.5e-26 Score=149.85 Aligned_cols=105 Identities=21% Similarity=0.303 Sum_probs=84.0
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccch--------hHHHHHHHHHhcCCCEEEEEcCCCCC
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSF--------TDKIFDLIQEVRGKDTLVFHCALSQV 75 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~--------~~~~~~~~~~~~~~~~ivv~c~~g~~ 75 (132)
....||++++.+++. ++.+|||+|++.||..||||||+|+|...+ .+.+..+...++++++||+||.+|.
T Consensus 16 ~~~~is~~e~~~~l~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~- 93 (129)
T 1tq1_A 16 VPSSVSVTVAHDLLL-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGG- 93 (129)
T ss_dssp CCEEEEHHHHHHHHH-HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCS-
T ss_pred CCcccCHHHHHHHhc-CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCc-
Confidence 467899999999887 467899999999999999999999998322 1233444334577899999999885
Q ss_pred CcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCcc
Q 032854 76 RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVC 118 (132)
Q Consensus 76 ~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~ 118 (132)
++..++ ..|.+ .||++|++|+||+.+|..+|+|++
T Consensus 94 rs~~aa----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 94 RSIKAT----TDLLH----AGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp HHHHHH----HHHHH----HHCCSEEEEECCHHHHHHHTCCCC
T ss_pred HHHHHH----HHHHH----cCCCCeEEeCCcHHHHHhCCCCCC
Confidence 555554 44544 899999999999999999999985
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.92 E-value=9.8e-26 Score=145.07 Aligned_cols=103 Identities=20% Similarity=0.333 Sum_probs=83.4
Q ss_pred ccccHHHHHhhhCCC--CeEEEeeCCCCCc-CCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCC-cHHHH
Q 032854 6 SYISGSQLLSLKRRP--NIAVIDVRDDERS-YDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVR-GPTCA 81 (132)
Q Consensus 6 ~~is~~~~~~~~~~~--~~~liD~R~~~e~-~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~-~~~~a 81 (132)
..|+++++.+++..+ +.+|||+|++.|| ..||||||+|+|...+...+.. ++++++||+||.+|.+. +..++
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~----l~~~~~ivvyC~~g~r~~s~~a~ 90 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGE----LDPAKTYVVYDWTGGTTLGKTAL 90 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGG----SCTTSEEEEECSSSSCSHHHHHH
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhc----CCCCCeEEEEeCCCCchHHHHHH
Confidence 469999999988743 4999999999998 9999999999998777655443 47889999999998732 44444
Q ss_pred HHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 82 ~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
..|++ .||+ |++|.||+.+|..+|+|..+..
T Consensus 91 ----~~L~~----~G~~-v~~l~GG~~~W~~~~~p~~~~~ 121 (124)
T 3flh_A 91 ----LVLLS----AGFE-AYELAGALEGWKGMQLPLEHHH 121 (124)
T ss_dssp ----HHHHH----HTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred ----HHHHH----cCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence 44544 8996 9999999999999999988653
No 14
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.92 E-value=3.3e-26 Score=140.64 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=71.3
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHH
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l 84 (132)
++.||++++.+++.+ +.+|||+|++.||..||||||+|+|...+...+.. +++ ++||+||.+|. ++..++
T Consensus 1 ~~~is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~----l~~-~~ivvyC~~g~-rs~~a~--- 70 (94)
T 1wv9_A 1 MRKVRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHG----LPR-RPLLLVCEKGL-LSQVAA--- 70 (94)
T ss_dssp -CEECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCC----CCS-SCEEEECSSSH-HHHHHH---
T ss_pred CCcCCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHh----CCC-CCEEEEcCCCC-hHHHHH---
Confidence 357899999998875 68999999999999999999999998776654333 356 89999999875 554444
Q ss_pred HHHHHHHhhhcCCccEEEeccchhhhhhcC
Q 032854 85 ANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (132)
Q Consensus 85 ~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g 114 (132)
..|++ .||+ |++|+||+.+|..+|
T Consensus 71 -~~L~~----~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 71 -LYLEA----EGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp -HHHHH----HTCC-EEEETTGGGCC----
T ss_pred -HHHHH----cCCc-EEEEcccHHHHHhCc
Confidence 45544 8998 999999999998764
No 15
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.6e-25 Score=146.47 Aligned_cols=107 Identities=21% Similarity=0.336 Sum_probs=85.3
Q ss_pred CcccccHHHHHhhhC--CCCeEEEeeCCCCCcCCCccCCccccCccchhHH-------HHHHHH--HhcCCCEEEEEcCC
Q 032854 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-------IFDLIQ--EVRGKDTLVFHCAL 72 (132)
Q Consensus 4 ~~~~is~~~~~~~~~--~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~-------~~~~~~--~~~~~~~ivv~c~~ 72 (132)
.+..||++++.+++. +++.+|||+|++.||..||||||+|+|...+... +...+. ..+++++||+||.+
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~ 100 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCAS 100 (139)
T ss_dssp CCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSS
T ss_pred CcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCC
Confidence 567899999999886 3579999999999999999999999999887542 222221 13568999999998
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 73 SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 73 g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
|. ++..++ ..|++ .||++|++|+||+.+|..+|+|+..
T Consensus 101 G~-rs~~aa----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 101 GK-RGGEAQ----KVASS----HGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SH-HHHHHH----HHHHT----TTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred Cc-hHHHHH----HHHHH----cCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 75 555444 44544 9999999999999999999999753
No 16
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.91 E-value=1.9e-24 Score=143.59 Aligned_cols=110 Identities=30% Similarity=0.440 Sum_probs=85.9
Q ss_pred CcccccHHHHHhhhCCC----CeEEEeeCCCCCcCCCccCCccccCccchhH-HHHHHHHHh--cCCCEEEEEc-CCCCC
Q 032854 4 SISYISGSQLLSLKRRP----NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLIQEV--RGKDTLVFHC-ALSQV 75 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~----~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-~~~~~~~~~--~~~~~ivv~c-~~g~~ 75 (132)
.+..|+++++.+++..+ +.+|||+|++ ||..||||||+|+|...+.. .+..+...+ ...+.||+|| .+|.
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~- 80 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLV- 80 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSS-
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCC-
Confidence 46789999999988753 7999999999 99999999999999988764 444444333 2334677789 5665
Q ss_pred CcHHHHHHHHHHHHHHhhhcCC--ccEEEeccchhhhhhcCCCccc
Q 032854 76 RGPTCAKRLANYLDEVKEDTGI--NSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 76 ~~~~~a~~l~~~L~~~~~~~G~--~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
++..++.+++..|.+ .|| .+|++|+||+.+|..++.+++.
T Consensus 81 rs~~aa~~~~~~L~~----~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 81 RAPKGANRFALAQKK----LGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp HHHHHHHHHHHHHHH----HTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred ccHHHHHHHHHHHHH----cCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 677676555555644 897 5999999999999999988875
No 17
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.91 E-value=1.5e-25 Score=141.47 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=81.8
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHH
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l 84 (132)
...||++++ ..++.+|||+|++.||..||||||+|+|...+...+... .++++++||+||.+|. ++..++
T Consensus 4 ~~~is~~el----~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~--~~~~~~~ivvyC~~G~-rs~~aa--- 73 (110)
T 2k0z_A 4 DYAISLEEV----NFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFL--SQHKDKKVLLHCRAGR-RALDAA--- 73 (110)
T ss_dssp TTEEETTTC----CGGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHH--HSCSSSCEEEECSSSH-HHHHHH---
T ss_pred eeeeCHHHh----ccCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhc--ccCCCCEEEEEeCCCc-hHHHHH---
Confidence 346777776 344689999999999999999999999999887765542 2478899999999874 554444
Q ss_pred HHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 85 ~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
..|++ .||++ ++|+||+.+|..+|+|++++..
T Consensus 74 -~~L~~----~G~~~-~~l~GG~~~W~~~g~p~~~~~~ 105 (110)
T 2k0z_A 74 -KSMHE----LGYTP-YYLEGNVYDFEKYGFRMVYDDT 105 (110)
T ss_dssp -HHHHH----TTCCC-EEEESCGGGTTTTTCCCBCCCS
T ss_pred -HHHHH----CCCCE-EEecCCHHHHHHCCCcEecCCC
Confidence 45544 99999 9999999999999999987654
No 18
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.91 E-value=3.9e-25 Score=149.33 Aligned_cols=112 Identities=28% Similarity=0.494 Sum_probs=87.0
Q ss_pred CcccccHHHHHhhhCCC-------CeEEEeeCCCCCcCCCccCCccccCccchhHH---HHHHHHHhc-------CCCEE
Q 032854 4 SISYISGSQLLSLKRRP-------NIAVIDVRDDERSYDGHITGSLHYPSDSFTDK---IFDLIQEVR-------GKDTL 66 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~-------~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~---~~~~~~~~~-------~~~~i 66 (132)
.++.||++++.+++..+ +++|||+|+ .||..||||||+|+|...+... +..+...+. .+++|
T Consensus 29 ~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~I 107 (169)
T 3f4a_A 29 NVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNV 107 (169)
T ss_dssp SEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCeE
Confidence 46789999999998742 489999999 9999999999999999887654 555543221 13799
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHhhhcC--CccEEEeccchhhhhhcCCCcccc
Q 032854 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTG--INSIFVLERGFKGWEASGKPVCRC 120 (132)
Q Consensus 67 vv~c~~g~~~~~~~a~~l~~~L~~~~~~~G--~~~v~~l~gG~~~w~~~g~p~~~~ 120 (132)
|+||.+|..++..++.++...|. ..| +.+|++|+||+.+|.+++.|...-
T Consensus 108 VvyC~sG~~Rs~~aa~~l~~~L~----~~G~~~~~V~~L~GG~~aW~~~~~~~~~~ 159 (169)
T 3f4a_A 108 IFHCMLSQQRGPSAAMLLLRSLD----TAELSRCRLWVLRGGFSRWQSVYGDDESV 159 (169)
T ss_dssp EEECSSSSSHHHHHHHHHHHTCC----HHHHTTEEEEEETTHHHHHHHHHTTCTTT
T ss_pred EEEeCCCCCcHHHHHHHHHHHHH----HcCCCCCCEEEECCCHHHHHHHcCCcccc
Confidence 99999875578777765554432 256 579999999999999998876543
No 19
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.90 E-value=1.4e-23 Score=154.15 Aligned_cols=110 Identities=16% Similarity=0.212 Sum_probs=87.7
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCC-cCCCccCCccccCccc-hh----------HHHHHHHHH--hcCCCEEEEEc
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDER-SYDGHITGSLHYPSDS-FT----------DKIFDLIQE--VRGKDTLVFHC 70 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e-~~~~hI~gai~ip~~~-~~----------~~~~~~~~~--~~~~~~ivv~c 70 (132)
...||++++.+++.+++++|||+|+..+ |..||||||+|+|+.. +. ..+...+.. ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 4569999999999877899999999876 9999999999999742 22 345555544 46889999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 71 ALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 71 ~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
.+|..++. +++..|+. +||++|++|+||+.+|..+|+|++++..
T Consensus 119 ~~g~~~a~----~a~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 119 DKSNWWAA----YALWVFTL----FGHADVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp SGGGHHHH----HHHHHHHH----TTCSCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred CCCCccHH----HHHHHHHH----cCCCceEEccCCHHHHhhcCCCcccCCC
Confidence 87652333 33455544 9999999999999999999999998654
No 20
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.90 E-value=7.8e-25 Score=140.77 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=77.7
Q ss_pred ccccHHHHHhhhCCC-CeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHH----Hh---------cCCCEEEEEcC
Q 032854 6 SYISGSQLLSLKRRP-NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQ----EV---------RGKDTLVFHCA 71 (132)
Q Consensus 6 ~~is~~~~~~~~~~~-~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~----~~---------~~~~~ivv~c~ 71 (132)
.+||++++.+++..+ +.+|||+|++.||..||||||+|+|...+......+.. .+ +++++||+||.
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~ 80 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK 80 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEECS
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEEcC
Confidence 368999999998744 58999999999999999999999999877643222211 11 12349999999
Q ss_pred CCCCCcHHHHHHHHHHHHHH--hhhcCCccEEEeccchhhhhhcCCC
Q 032854 72 LSQVRGPTCAKRLANYLDEV--KEDTGINSIFVLERGFKGWEASGKP 116 (132)
Q Consensus 72 ~g~~~~~~~a~~l~~~L~~~--~~~~G~~~v~~l~gG~~~w~~~g~p 116 (132)
+|. ++..++. .|.+. ....|+.+|++|+||+.+|..+..|
T Consensus 81 ~G~-rs~~a~~----~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 81 LGN-DSQKAVK----ILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp SSS-HHHHHHH----HHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCC-cHHHHHH----HHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 886 5555553 44330 0113789999999999999987655
No 21
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=9.7e-24 Score=151.42 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=90.4
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhH-------------HHHHHHHH--hcCCCEEEEE
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD-------------KIFDLIQE--VRGKDTLVFH 69 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-------------~~~~~~~~--~~~~~~ivv~ 69 (132)
...|+++++.+++.+++.+|||+|++.+|..||||||+|+|...+.. .+...+.. ++++++||||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 34799999999997668999999999999999999999999887532 34444444 4678999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCc
Q 032854 70 CALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (132)
Q Consensus 70 c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (132)
|.+|..++..++ ..|+. +||++|++|+||+.+|..+|+|++++...+
T Consensus 88 c~~g~~~s~~a~----~~L~~----~G~~~v~~L~GG~~~w~~~g~p~~~~~~~~ 134 (271)
T 1e0c_A 88 DDEGGGWAGRFI----WLLDV----IGQQRYHYLNGGLTAWLAEDRPLSRELPAP 134 (271)
T ss_dssp CSSSSHHHHHHH----HHHHH----TTCCCEEEETTHHHHHHHTTCCCBCCCCCC
T ss_pred cCCCCccHHHHH----HHHHH----cCCCCeEEecCCHHHHHHcCCCccCCCCCC
Confidence 998753444333 45544 999999999999999999999999876653
No 22
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=1.8e-23 Score=150.67 Aligned_cols=111 Identities=18% Similarity=0.322 Sum_probs=89.7
Q ss_pred ccccHHHHHhhhCCCCeEEEeeC----------CCCCcCCCccCCccccCccchh-------------HHHHHHHHH--h
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVR----------DDERSYDGHITGSLHYPSDSFT-------------DKIFDLIQE--V 60 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R----------~~~e~~~~hI~gai~ip~~~~~-------------~~~~~~~~~--~ 60 (132)
..||++++.+++.+++++|||+| +..+|..||||||+|+|...+. ..+...+.. +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 57999999999987789999999 5678999999999999987652 344555554 3
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCc
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (132)
+++++|||||.+|.+.+..++ ..|+. +||++|++|+||+.+|..+|+|++++...+
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~ 139 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAW----WMLRT----FGVEKVSILGGGLAGWQRDDLLLEEGAVEL 139 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHH----HHHHH----TTCSCEEEETTHHHHHHHTTCCCBBSCCCC
T ss_pred CCCCeEEEECCCCCccHHHHH----HHHHH----cCCCCEEEecCCHHHHHHCCCcccCCCCCC
Confidence 678999999998864355444 44544 999999999999999999999999876644
No 23
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=3.8e-24 Score=141.45 Aligned_cols=109 Identities=20% Similarity=0.291 Sum_probs=81.9
Q ss_pred cccccHHHHHhhhC-CCCeEEEeeCCCCCcCC-Ccc------CCccccCccch-----hHHHHHHHHH-----hcCCCEE
Q 032854 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GHI------TGSLHYPSDSF-----TDKIFDLIQE-----VRGKDTL 66 (132)
Q Consensus 5 ~~~is~~~~~~~~~-~~~~~liD~R~~~e~~~-~hI------~gai~ip~~~~-----~~~~~~~~~~-----~~~~~~i 66 (132)
+..|+++++.+++. +++.+|||+|++.||.. ||| |||+|+|...+ ......+... ++++++|
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i 83 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERPV 83 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CCE
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCCEE
Confidence 56799999999887 35789999999999997 999 99999998771 1122333222 2678999
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccch------------hhhhhcCCCccccCC
Q 032854 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF------------KGWEASGKPVCRCTD 122 (132)
Q Consensus 67 vv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~------------~~w~~~g~p~~~~~~ 122 (132)
||||.+|. ++..++ ..|++ .||++|++|+||+ .+|..+|+|++.+..
T Consensus 84 vvyC~~G~-rS~~aa----~~L~~----~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~~ 142 (148)
T 2fsx_A 84 IFLCRSGN-RSIGAA----EVATE----AGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGRS 142 (148)
T ss_dssp EEECSSSS-THHHHH----HHHHH----TTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC--
T ss_pred EEEcCCCh-hHHHHH----HHHHH----cCCcceEEEcCChhhhhhhccccccccHHHcCCCCCcccc
Confidence 99999886 665554 44544 9999999999999 689999999886543
No 24
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.89 E-value=4.6e-24 Score=141.50 Aligned_cols=119 Identities=18% Similarity=0.234 Sum_probs=83.5
Q ss_pred cccccHHHHHhhhC--CCCeEEEeeCCCCCcCCCccCCccccCccchh-HHHH-------HHH-H------HhcCCCEEE
Q 032854 5 ISYISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFT-DKIF-------DLI-Q------EVRGKDTLV 67 (132)
Q Consensus 5 ~~~is~~~~~~~~~--~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~-~~~~-------~~~-~------~~~~~~~iv 67 (132)
.+.|+++++.++++ +++++|||+|++.||..||||||+|+|...+. .++. .++ . .++++++||
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iV 82 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVV 82 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEE
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEE
Confidence 46799999999987 35789999999999999999999999998763 3222 322 1 125788999
Q ss_pred EEcCCCCCCcHHHH--HHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCccc
Q 032854 68 FHCALSQVRGPTCA--KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCK 126 (132)
Q Consensus 68 v~c~~g~~~~~~~a--~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~ 126 (132)
|||.+|. ++..++ ..++..|+. | ..||++|++|+||+.+|..++.+++++.....+
T Consensus 83 vyc~~g~-~s~~a~~~~~~~~~L~~-l-~~G~~~v~~L~GG~~~W~~~~~~~~~~~~~~~p 140 (153)
T 2vsw_A 83 VYDQSSQ-DVASLSSDCFLTVLLGK-L-EKSFNSVHLLAGGFAEFSRCFPGLCEGKSTLVP 140 (153)
T ss_dssp EECSSCC-CGGGSCTTSHHHHHHHH-H-HHHCSCEEEETTHHHHHHHHCGGGEEC------
T ss_pred EEeCCCC-cccccccchHHHHHHHH-H-HhCCCcEEEEeChHHHHHHhChhhhcCCCCcCC
Confidence 9999886 443221 111233332 1 139999999999999999988888777654433
No 25
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.89 E-value=2.7e-24 Score=143.80 Aligned_cols=127 Identities=20% Similarity=0.313 Sum_probs=89.3
Q ss_pred CcccccHHHHHhhhCC------CCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHh-cCCCEE--EEEcC-CC
Q 032854 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEV-RGKDTL--VFHCA-LS 73 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~------~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~-~~~~~i--vv~c~-~g 73 (132)
.++.||++++.+++.. ++.+|||+|++.||..||||||+|+|...+..........+ +++++| |+||. +|
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~ivvv~yC~~sg 100 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSS 100 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTSCCCCCTTSEEEEEEECSSSS
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhhhhccCCCCCeEEEEEcCCCC
Confidence 4678999999999885 37899999999999999999999999877644321100011 356775 67898 66
Q ss_pred CCCcHHHHHHHHHHHHH--HhhhcCCccEEEeccchhhhhhcCCCccccCCCccccccCCC
Q 032854 74 QVRGPTCAKRLANYLDE--VKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCKEENQQY 132 (132)
Q Consensus 74 ~~~~~~~a~~l~~~L~~--~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~~~~~~~ 132 (132)
. ++..++..|...-+. .+..+||++|++|+||+.+|..++.|++.+. .+....-++|
T Consensus 101 ~-rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~-~y~~~~~~~y 159 (161)
T 1c25_A 101 E-RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP-SYRPMHHEDF 159 (161)
T ss_dssp S-HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS-CCCCCCCCCC
T ss_pred c-chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC-CceecCCccc
Confidence 5 666666444321000 0224699999999999999999999988653 3444444443
No 26
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.89 E-value=1.1e-23 Score=136.42 Aligned_cols=98 Identities=23% Similarity=0.397 Sum_probs=73.5
Q ss_pred CCcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhH-----------------------------HH
Q 032854 3 RSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----------------------------KI 53 (132)
Q Consensus 3 ~~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-----------------------------~~ 53 (132)
..+..|+++++.+ .++.+|||+|++.||..||||||+|+|...+.. .+
T Consensus 2 ~~~~~i~~~el~~---~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (134)
T 3g5j_A 2 NAMSVIKIEKALK---LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDI 78 (134)
T ss_dssp ---CEECHHHHTT---CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHH
T ss_pred CCccccCHHHHHh---cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHH
Confidence 3567899999987 557999999999999999999999999975431 12
Q ss_pred HHHHHHhcCC-CEEEEEcC-CCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhc
Q 032854 54 FDLIQEVRGK-DTLVFHCA-LSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (132)
Q Consensus 54 ~~~~~~~~~~-~~ivv~c~-~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~ 113 (132)
...+..++++ ++||+||. +|. ++..++ ..|+. +|| +|++|+||+.+|.+.
T Consensus 79 ~~~~~~~~~~~~~ivvyC~~~G~-rs~~a~----~~L~~----~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 79 YLQAAELALNYDNIVIYCARGGM-RSGSIV----NLLSS----LGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHHHHTTCSEEEEECSSSSH-HHHHHH----HHHHH----TTC-CCEEETTHHHHHHHH
T ss_pred HHHHHHhccCCCeEEEEECCCCh-HHHHHH----HHHHH----cCC-ceEEEeCcHHHHHHH
Confidence 2223334677 99999995 553 555444 45544 999 999999999999874
No 27
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.89 E-value=1.7e-23 Score=150.52 Aligned_cols=112 Identities=18% Similarity=0.265 Sum_probs=88.1
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCC-CCCcCCCccCCccccCccch-----------hHHHHHHHHH--hcCCCEEEEE
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRD-DERSYDGHITGSLHYPSDSF-----------TDKIFDLIQE--VRGKDTLVFH 69 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~-~~e~~~~hI~gai~ip~~~~-----------~~~~~~~~~~--~~~~~~ivv~ 69 (132)
....|+++++.+++.+++.+|||+|+ +.+|..||||||+|+|...+ ...+...+.. ++++++||||
T Consensus 4 ~~~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 83 (277)
T 3aay_A 4 CDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILY 83 (277)
T ss_dssp HHHEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEE
T ss_pred CCceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 34579999999998877899999998 89999999999999998642 1234444444 4678999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCC
Q 032854 70 CALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 123 (132)
Q Consensus 70 c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (132)
|.+|..++. +++..|+. +||++|++|+||+.+|..+|+|++++...
T Consensus 84 c~~g~~~s~----~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 129 (277)
T 3aay_A 84 GGNNNWFAA----YAYWYFKL----YGHEKVKLLDGGRKKWELDGRPLSSDPVS 129 (277)
T ss_dssp CSGGGHHHH----HHHHHHHH----TTCCSEEEETTHHHHHHHTTCCCBCCCCC
T ss_pred CCCCCchHH----HHHHHHHH----cCCCcEEEecCCHHHHHHcCCccccCCCC
Confidence 987642333 33455544 99999999999999999999999887653
No 28
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=2.2e-23 Score=150.49 Aligned_cols=112 Identities=15% Similarity=0.223 Sum_probs=87.7
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeC-CCCCcCCCccCCccccCccchh-----------HHHHHHHHH--hcCCCEEEEE
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVR-DDERSYDGHITGSLHYPSDSFT-----------DKIFDLIQE--VRGKDTLVFH 69 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R-~~~e~~~~hI~gai~ip~~~~~-----------~~~~~~~~~--~~~~~~ivv~ 69 (132)
....||++++.+++.+++++|||+| ++.+|..||||||+|+|...+. ..+...+.. ++++++||||
T Consensus 6 ~~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvy 85 (285)
T 1uar_A 6 PEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLY 85 (285)
T ss_dssp GGGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 4567999999999987689999999 6899999999999999986411 134444444 3678999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCC
Q 032854 70 CALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 123 (132)
Q Consensus 70 c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (132)
|.+|..++ .+++..|+. +||++|++|+||+.+|..+|+|++++...
T Consensus 86 c~~g~~~s----~~a~~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 131 (285)
T 1uar_A 86 GDKNNWWA----AYAFWFFKY----NGHKDVRLMNGGRQKWVEEGRPLTTEVPS 131 (285)
T ss_dssp CHHHHHHH----HHHHHHHHH----TTCSCEEEETTHHHHHHHHTCCCBCCCCC
T ss_pred CCCCCccH----HHHHHHHHH----cCCCCeEEecCCHHHHHHCCCcccCCCCc
Confidence 98653223 234455554 99999999999999999999999886543
No 29
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.88 E-value=3.6e-23 Score=134.69 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=87.0
Q ss_pred CcccccHHHHHhhhC-CCCeEEEeeCCCCCcCC-Ccc------CCccccCccchhH--HHHHHHHHh--cCCCEEEEEcC
Q 032854 4 SISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GHI------TGSLHYPSDSFTD--KIFDLIQEV--RGKDTLVFHCA 71 (132)
Q Consensus 4 ~~~~is~~~~~~~~~-~~~~~liD~R~~~e~~~-~hI------~gai~ip~~~~~~--~~~~~~~~~--~~~~~ivv~c~ 71 (132)
....|+++++.+++. +++.+|||+|++.||.. +|+ |||+|||...+.. .+..+.... +++++||+||.
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~C~ 82 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDK 82 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEECS
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEEeC
Confidence 356799999999887 56799999999999975 444 7999999877532 223332222 56899999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccch---hhhhhcCCCccccCCCcc
Q 032854 72 LSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF---KGWEASGKPVCRCTDVPC 125 (132)
Q Consensus 72 ~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~---~~w~~~g~p~~~~~~~~~ 125 (132)
+|. ++..++ ..|.+ +||++|+.|.||+ .+|..+|+|++.+...+-
T Consensus 83 sG~-RS~~aa----~~L~~----~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~~~~ 130 (134)
T 1vee_A 83 FDG-NSELVA----ELVAL----NGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSG 130 (134)
T ss_dssp SST-THHHHH----HHHHH----HTCSEEEECTTTTTSTTSSGGGTCCEECCCCCCC
T ss_pred CCC-cHHHHH----HHHHH----cCCcceEEecCCccCCcchhhcCCCCCCCCCCCC
Confidence 997 666665 34444 8999999999999 789999999998766543
No 30
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.88 E-value=2.5e-23 Score=144.90 Aligned_cols=115 Identities=18% Similarity=0.354 Sum_probs=85.6
Q ss_pred CcccccHHHHHhhhCC------CCeEEEeeCCCCCcCCCccCCccccCccchhHH-HHHHHHHhc--CCCEE--EEEcC-
Q 032854 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IFDLIQEVR--GKDTL--VFHCA- 71 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~------~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~-~~~~~~~~~--~~~~i--vv~c~- 71 (132)
.+..|+++++.+++.. ++.+|||+|++.||..||||||+|+|...+... +... ..++ ++++| |+||.
T Consensus 42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~~-~~l~~~~d~~ivvVvyC~~ 120 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKS-PIAPCSLDKRVILIFHCEF 120 (211)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTT-TCCCSSTTSEEEEEEECSS
T ss_pred CCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhhh-hhccccCCCCeEEEEECCC
Confidence 4678999999999885 368999999999999999999999998776542 2210 1122 56787 78899
Q ss_pred CCCCCcHHHHHHHHHHHH--HHhhhcCCccEEEeccchhhhhhcCCCcccc
Q 032854 72 LSQVRGPTCAKRLANYLD--EVKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (132)
Q Consensus 72 ~g~~~~~~~a~~l~~~L~--~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (132)
+|. ++..++..|...-+ ..|..+||++|++|+||+.+|..++.|++.+
T Consensus 121 sG~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 121 SSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp SSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred CCc-cHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 775 66666644332100 0123479999999999999999999998764
No 31
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.88 E-value=8.5e-24 Score=138.01 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=76.9
Q ss_pred cccHHHHHh--------hhCCCCeEEEeeCCCCCcCCCccCCccccCccchhH--HH-------HHHHH------Hh--c
Q 032854 7 YISGSQLLS--------LKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD--KI-------FDLIQ------EV--R 61 (132)
Q Consensus 7 ~is~~~~~~--------~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~--~~-------~~~~~------~~--~ 61 (132)
.|+++|+.+ ++.+++.+|||+|++.+|..||||||+|+|...+.. .+ ..++. .. .
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 589999998 666667899999999999999999999999987532 11 11111 00 0
Q ss_pred CCCEEEEEcCCCCCCcH----HHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 62 GKDTLVFHCALSQVRGP----TCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~----~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
.+++||+||.+|.+.+. ..+.+++..|.. .|| +|++|+||+.+|..+|+|++++.
T Consensus 82 ~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~----~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 82 FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKR----EGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHH----TTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred CCCcEEEEECCCCchhhcCcccHHHHHHHHHHH----cCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 26889999998873221 002233345544 999 99999999999999999998765
No 32
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.88 E-value=2e-23 Score=141.39 Aligned_cols=116 Identities=16% Similarity=0.297 Sum_probs=83.1
Q ss_pred CcccccHHHHHhhhCC------CCeEEEeeCCCCCcCCCccCCccccCccchhHH-HHHHHHHhc--CCCEEEE--EcC-
Q 032854 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IFDLIQEVR--GKDTLVF--HCA- 71 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~------~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~-~~~~~~~~~--~~~~ivv--~c~- 71 (132)
.++.|+++++.+++.. ++.+|||+|++.||..||||||+|+|...+... +... ..++ ++++||| ||+
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~-~~~~~~~~~~ivvv~yC~~ 100 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKS-PIAPCSLDKRVILIFHSEF 100 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSS-CCCC----CEEEEEEECSS
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhh-hhccccCCCCeEEEEECCC
Confidence 4678999999999875 378999999999999999999999998776543 2110 0112 5778755 588
Q ss_pred CCCCCcHHHHHHHHHHH--HHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 72 LSQVRGPTCAKRLANYL--DEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 72 ~g~~~~~~~a~~l~~~L--~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
+|. ++..++..|...- ...|..+||++|++|+||+.+|.+++.|++.+.
T Consensus 101 ~g~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~ 151 (175)
T 2a2k_A 101 SSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 151 (175)
T ss_dssp SSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred CCC-ccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence 665 6666664333210 001334799999999999999999999987643
No 33
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.87 E-value=9.6e-23 Score=146.04 Aligned_cols=104 Identities=16% Similarity=0.311 Sum_probs=84.7
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHh--cCCCEEEEEcCCCCCCcHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEV--RGKDTLVFHCALSQVRGPTCA 81 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~--~~~~~ivv~c~~g~~~~~~~a 81 (132)
....|+++++.+++.+++++|||+|++.||..||||||+|+|...+.+....+...+ +++++||+||.+|. ++..++
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~-RS~~Aa 198 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGI-RCEKTT 198 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSH-HHHHHH
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCCh-HHHHHH
Confidence 357899999999998778999999999999999999999999998876544443332 57899999999775 555444
Q ss_pred HHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCC
Q 032854 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKP 116 (132)
Q Consensus 82 ~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p 116 (132)
..|.+ .||++|++|+||+.+|.++..+
T Consensus 199 ----~~L~~----~Gf~nV~~L~GGi~aW~~~~~~ 225 (265)
T 4f67_A 199 ----AYMKE----LGFEHVYQLHDGILNYLESIPE 225 (265)
T ss_dssp ----HHHHH----HTCSSEEEETTHHHHHHHHSCT
T ss_pred ----HHHHH----cCCCCEEEecCHHHHHHHhcCc
Confidence 45544 8999999999999999987443
No 34
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.87 E-value=1.7e-22 Score=144.96 Aligned_cols=105 Identities=19% Similarity=0.289 Sum_probs=85.4
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCcC--------CCccCCccccCccchhH---------HHHHHHH--HhcCCCEE
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERSY--------DGHITGSLHYPSDSFTD---------KIFDLIQ--EVRGKDTL 66 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~~--------~~hI~gai~ip~~~~~~---------~~~~~~~--~~~~~~~i 66 (132)
..|+++++.+++.+++.+|||+|++.+|. .||||||+|+|...+.+ .+...+. .++++++|
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 226 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEI 226 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEE
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence 45799999999987789999999999999 99999999999887642 2334444 34688999
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhc-CCCccc
Q 032854 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS-GKPVCR 119 (132)
Q Consensus 67 vv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~-g~p~~~ 119 (132)
|+||.+|. ++..++ ..|+. +||++|++|+||+.+|... ++|+++
T Consensus 227 vvyC~~G~-rs~~a~----~~L~~----~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 227 VTHCQTHH-RSGLTY----LIAKA----LGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp EEECSSSS-HHHHHH----HHHHH----TTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred EEECCchH-HHHHHH----HHHHH----cCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 99999885 555444 44444 9999999999999999998 999863
No 35
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.87 E-value=7.8e-23 Score=159.21 Aligned_cols=110 Identities=19% Similarity=0.318 Sum_probs=90.8
Q ss_pred CcccccHHHHHhhhCC-CCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHH
Q 032854 4 SISYISGSQLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAK 82 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~-~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~ 82 (132)
.++.||++++.+++.. ++.+|||+|++.+|..||||||+|+|...|...+..+.. +++++|||||.+|. ++..++
T Consensus 5 ~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~~--~~~~~iVvyc~~g~-~s~~a~- 80 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARVP--RRDTPITVYDDGEG-LAPVAA- 80 (539)
T ss_dssp -CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHSC--CTTSCEEEECSSSS-HHHHHH-
T ss_pred cCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhCC--CCCCeEEEEECCCC-hHHHHH-
Confidence 5788999999998873 479999999999999999999999999888776665521 36899999999875 544444
Q ss_pred HHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCc
Q 032854 83 RLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (132)
Q Consensus 83 ~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (132)
..|+. +||++|++|+||+.+|.++|+|++++...|
T Consensus 81 ---~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~ 115 (539)
T 1yt8_A 81 ---QRLHD----LGYSDVALLDGGLSGWRNAGGELFRDVNVP 115 (539)
T ss_dssp ---HHHHH----TTCSSEEEETTHHHHHHHTTCCCBCSSSHH
T ss_pred ---HHHHH----cCCCceEEeCCCHHHHHhcCCCcccCCcCc
Confidence 45544 999999999999999999999998876544
No 36
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.87 E-value=3.2e-22 Score=145.33 Aligned_cols=112 Identities=20% Similarity=0.338 Sum_probs=88.1
Q ss_pred cccccHHHHHhhhCC----CCeEEEeeC--------CCCCcCCCccCCccccCccchhH-------------HHHHHHHH
Q 032854 5 ISYISGSQLLSLKRR----PNIAVIDVR--------DDERSYDGHITGSLHYPSDSFTD-------------KIFDLIQE 59 (132)
Q Consensus 5 ~~~is~~~~~~~~~~----~~~~liD~R--------~~~e~~~~hI~gai~ip~~~~~~-------------~~~~~~~~ 59 (132)
-..|+++++.+++.. ++++|||+| +..+|..||||||+|+|...+.. .+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 357999999998875 579999999 57899999999999999886532 34444443
Q ss_pred --hcCCCEEEEEcCC--CCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCc
Q 032854 60 --VRGKDTLVFHCAL--SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (132)
Q Consensus 60 --~~~~~~ivv~c~~--g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (132)
++++++|||||.+ |...+..++ ..|+. +||++|++|+||+.+|..+|+|++++...+
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~----~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~ 147 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVW----WMFRV----FGHRTVSVLNGGFRNWLKEGHPVTSEPSRP 147 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHH----HHHHH----TTCCCEEEETTHHHHHHHTTCCCBCSCCCC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHH----HHHHH----cCCCcEEEcCCCHHHHHHcCCccccCCCCC
Confidence 3678999999998 654344443 44544 999999999999999999999998875543
No 37
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.87 E-value=8.8e-23 Score=123.02 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=65.7
Q ss_pred CeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccE
Q 032854 21 NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSI 100 (132)
Q Consensus 21 ~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v 100 (132)
+.+|||+|++.||..||||||+|+|...+...+..+. .+++++||+||.+|. ++..++ ..|++ .||++|
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l~--~~~~~~ivv~C~~g~-rs~~aa----~~L~~----~G~~~v 69 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAV--PDKNDTVKVYCNAGR-QSGQAK----EILSE----MGYTHV 69 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHHC--CCTTSEEEEEESSSH-HHHHHH----HHHHH----TTCSSE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHhC--CCCCCcEEEEcCCCc-hHHHHH----HHHHH----cCCCCE
Confidence 4689999999999999999999999887776555441 267899999999874 554444 45544 999999
Q ss_pred EEeccchhhhhhcCCCccc
Q 032854 101 FVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 101 ~~l~gG~~~w~~~g~p~~~ 119 (132)
+++ ||+.+|. .|+.+
T Consensus 70 ~~l-GG~~~w~---~~~~~ 84 (85)
T 2jtq_A 70 ENA-GGLKDIA---MPKVK 84 (85)
T ss_dssp EEE-EETTTCC---SCEEE
T ss_pred Eec-cCHHHHh---ccccc
Confidence 999 9999993 44543
No 38
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.87 E-value=5.8e-22 Score=144.57 Aligned_cols=111 Identities=15% Similarity=0.269 Sum_probs=85.9
Q ss_pred cccccHHHHHhhhCCC----CeEEEeeC---------CCCCcCCCccCCccccCccchh-------------HHHHHHHH
Q 032854 5 ISYISGSQLLSLKRRP----NIAVIDVR---------DDERSYDGHITGSLHYPSDSFT-------------DKIFDLIQ 58 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~----~~~liD~R---------~~~e~~~~hI~gai~ip~~~~~-------------~~~~~~~~ 58 (132)
...||++++.+++..+ +++|||+| +..+|..||||||+|+|+..+. ..+...+.
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~ 100 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAG 100 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHH
Confidence 4669999999998754 79999999 6789999999999999886531 34555555
Q ss_pred Hh--cCCCEEEEEcCC--CCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCC
Q 032854 59 EV--RGKDTLVFHCAL--SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 123 (132)
Q Consensus 59 ~~--~~~~~ivv~c~~--g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (132)
.+ +++++|||||.+ |..++.. ++..|+. +||++|++|+||+.+|..+|+|++++...
T Consensus 101 ~lgi~~~~~VVvyc~~~~g~~~a~r----a~~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~ 161 (302)
T 3olh_A 101 RLGVGAATHVVIYDASDQGLYSAPR----VWWMFRA----FGHHAVSLLDGGLRHWLRQNLPLSSGKSQ 161 (302)
T ss_dssp HTTCCSSCEEEEECCCTTSCSSHHH----HHHHHHH----TTCCCEEEETTHHHHHHHSCCC-CCSCCC
T ss_pred HcCCCCCCEEEEEeCCCCCcchHHH----HHHHHHH----cCCCcEEECCCCHHHHHHcCCCcccCCCC
Confidence 54 678999999974 3323333 3355544 99999999999999999999999987543
No 39
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.86 E-value=1.8e-22 Score=145.53 Aligned_cols=106 Identities=17% Similarity=0.308 Sum_probs=77.6
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCc-----------CCCccCCccccCccchhH--------HHHHHHH--HhcCCC
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTD--------KIFDLIQ--EVRGKD 64 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~-----------~~~hI~gai~ip~~~~~~--------~~~~~~~--~~~~~~ 64 (132)
..|+++++.+++..++.+|||+|++.|| ..||||||+|+|...+.. .+..++. .+++++
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDK 231 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSS
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCC
Confidence 4599999999887667899999999999 689999999999988754 5555444 246789
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh-cCCCcccc
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 120 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~-~g~p~~~~ 120 (132)
+||+||.+|. ++..++ ..|+. +||++|++|+||+.+|.. .++|+++.
T Consensus 232 ~ivv~C~~G~-rs~~a~----~~L~~----~G~~~v~~~~GG~~~W~~~~~~Pv~~~ 279 (280)
T 1urh_A 232 PIIVSCGSGV-TAAVVL----LALAT----LDVPNVKLYDGAWSEWGARADLPVEPV 279 (280)
T ss_dssp CEEEECCSSS-THHHHH----HHHHH----TTCSSCEEECCSCCC------------
T ss_pred CEEEECChHH-HHHHHH----HHHHH----cCCCCceeeCChHHHHhcCCCCCceec
Confidence 9999999886 555554 34444 899999999999999987 58998753
No 40
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.86 E-value=1.5e-22 Score=141.30 Aligned_cols=116 Identities=22% Similarity=0.385 Sum_probs=81.4
Q ss_pred CcccccHHHHHhhhCCC------CeEEEeeCCCCCcCCCccCCccccCccc-hhHHHHHH-HHHhcCCC--EEEEEcC-C
Q 032854 4 SISYISGSQLLSLKRRP------NIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDL-IQEVRGKD--TLVFHCA-L 72 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~------~~~liD~R~~~e~~~~hI~gai~ip~~~-~~~~~~~~-~~~~~~~~--~ivv~c~-~ 72 (132)
.++.||++++.+++..+ +++|||||.+.||..||||||+|||... +.+.+... ....++++ +||+||. +
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~~~~~~~k~~~VVvyC~~S 134 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPIVPLDTQKRIIIVFHCEFS 134 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCCCCSSTTSEEEEEEECCC-
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccccccccCCCCEEEEEeCCC
Confidence 46789999999999864 6899999999999999999999999864 32222110 00011234 4999999 7
Q ss_pred CCCCcHHHHHHHHHHHHHH--hhhcCCccEEEeccchhhhhhcCCCcccc
Q 032854 73 SQVRGPTCAKRLANYLDEV--KEDTGINSIFVLERGFKGWEASGKPVCRC 120 (132)
Q Consensus 73 g~~~~~~~a~~l~~~L~~~--~~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (132)
|. ++..++..|....+.. +..+||++|++|+||+.+|.++...++.+
T Consensus 135 G~-Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lcep 183 (216)
T 3op3_A 135 SE-RGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCEP 183 (216)
T ss_dssp -C-CHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred Ch-HHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcccccC
Confidence 75 7777775544322110 01238999999999999999987666655
No 41
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.86 E-value=4e-22 Score=144.87 Aligned_cols=108 Identities=17% Similarity=0.205 Sum_probs=87.6
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCc------------CCCccCCccccCccchhH---------HHHHHHHH--hcC
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERS------------YDGHITGSLHYPSDSFTD---------KIFDLIQE--VRG 62 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~------------~~~hI~gai~ip~~~~~~---------~~~~~~~~--~~~ 62 (132)
..|+++++.+++..++.+|||+|++.|| ..||||||+|+|...+.. .+...+.. +++
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 239 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDL 239 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCT
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCC
Confidence 5689999999887667899999999999 889999999999887642 44444443 467
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh-cCCCccccCC
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCTD 122 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~-~g~p~~~~~~ 122 (132)
+++||+||.+|. ++..++ ..|.. +||++|++|+||+.+|.. .++|++++..
T Consensus 240 ~~~ivv~C~sG~-rs~~a~----~~L~~----~G~~~v~~~~GG~~~W~~~~~~pv~~~~~ 291 (296)
T 1rhs_A 240 TKPLIATCRKGV-TACHIA----LAAYL----CGKPDVAIYDGSWFEWFHRAPPETWVSQG 291 (296)
T ss_dssp TSCEEEECSSSS-THHHHH----HHHHH----TTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred CCCEEEECCcHH-HHHHHH----HHHHH----cCCCCceeeCCcHHHHhcCCCCCcccCCC
Confidence 899999999986 555554 33433 899999999999999998 7999987753
No 42
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=7.5e-22 Score=153.69 Aligned_cols=107 Identities=18% Similarity=0.275 Sum_probs=91.2
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
....|+++++.+++..++.+|||+|++.+|..||||||+|+|...|...+..+ +++++||+||.+|. ++..++
T Consensus 375 ~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l~~l----~~~~~ivv~C~sG~-rs~~aa-- 447 (539)
T 1yt8_A 375 RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERL----GTAERYVLTCGSSL-LARFAV-- 447 (539)
T ss_dssp CCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGGGHHHHHHHH----CCCSEEEEECSSSH-HHHHHH--
T ss_pred cCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHHHhC----CCCCeEEEEeCCCh-HHHHHH--
Confidence 35679999999999877899999999999999999999999998887776654 78899999999875 554444
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCC
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 123 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (132)
..|+. +||++|++|+||+.+|.++|+|++++...
T Consensus 448 --~~L~~----~G~~~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 448 --AEVQA----LSGKPVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp --HHHHH----HHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred --HHHHH----cCCCCEEEeCCcHHHHHhCCCCcccCCCC
Confidence 45544 89999999999999999999999988544
No 43
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.85 E-value=2.6e-22 Score=133.08 Aligned_cols=108 Identities=21% Similarity=0.189 Sum_probs=77.2
Q ss_pred CcccccHHHHHhhhCCC--CeEEEeeCCCCCcCCCccCCccccCccchhH------------HH-----HHHHHHhcCCC
Q 032854 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD------------KI-----FDLIQEVRGKD 64 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~--~~~liD~R~~~e~~~~hI~gai~ip~~~~~~------------~~-----~~~~~~~~~~~ 64 (132)
....|+++++.+++..+ +.+|||+|++.+|..||||||+|+|...+.. .+ ...+..+.+++
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTD 93 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSS
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCC
Confidence 45779999999988754 7899999999999999999999999876420 11 12223345778
Q ss_pred EEEEEcCCCCCC-----c-HHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCcc
Q 032854 65 TLVFHCALSQVR-----G-PTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVC 118 (132)
Q Consensus 65 ~ivv~c~~g~~~-----~-~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~ 118 (132)
+||+||.+|.+. + ..++ ++...|. ..||+ |++|+||+.+|..+ +|..
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~-~~l~~l~----~~G~~-v~~L~GG~~~W~~~-~p~~ 146 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLG-LLLKKLK----DEGCR-AFYLEGGFSKFQAE-FSLH 146 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHH-HHHHHHH----HTTCC-CEECCCCHHHHHHH-HCSB
T ss_pred eEEEEeCCCCccccccccchHHH-HHHHHHH----HCCCc-eEEEcChHHHHHHH-ChHh
Confidence 999999988643 1 2222 2222222 25997 99999999999886 4443
No 44
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.84 E-value=1.6e-21 Score=140.80 Aligned_cols=108 Identities=18% Similarity=0.285 Sum_probs=83.5
Q ss_pred ccccHHHHHhhhC---CCCeEEEeeCCCCCcC----------------CCccCCccccCccchh---------HHHHHHH
Q 032854 6 SYISGSQLLSLKR---RPNIAVIDVRDDERSY----------------DGHITGSLHYPSDSFT---------DKIFDLI 57 (132)
Q Consensus 6 ~~is~~~~~~~~~---~~~~~liD~R~~~e~~----------------~~hI~gai~ip~~~~~---------~~~~~~~ 57 (132)
..|+++++.+++. .++..|||+|++.+|. .||||||+|+|...+. +.+...+
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~ 225 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALY 225 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHH
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHH
Confidence 3499999999883 1245799999999886 8999999999988764 2444554
Q ss_pred HH--hcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhh-hcCCCccccC
Q 032854 58 QE--VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE-ASGKPVCRCT 121 (132)
Q Consensus 58 ~~--~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~-~~g~p~~~~~ 121 (132)
.. ++++++||+||.+|. ++..++ ..|+ ..+||++|++|+||+.+|. .+++|++++.
T Consensus 226 ~~~g~~~~~~ivvyC~~G~-rs~~a~----~~L~---~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~ 284 (285)
T 1uar_A 226 EPLGITKDKDIVVYCRIAE-RSSHSW----FVLK---YLLGYPHVKNYDGSWTEWGNLVGVPIAKGE 284 (285)
T ss_dssp GGGTCCTTSEEEEECSSHH-HHHHHH----HHHH---TTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred HHcCCCCCCCEEEECCchH-HHHHHH----HHHH---HHcCCCCcceeCchHHHHhcCCCCCcccCC
Confidence 44 567899999998774 443333 4454 0399999999999999998 7999998764
No 45
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.84 E-value=6.3e-22 Score=151.81 Aligned_cols=102 Identities=21% Similarity=0.409 Sum_probs=85.8
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHH
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l 84 (132)
...++++++.+++..++.+|||+|++.+|..||||||+|+|...+.+.+.. ++++++||+||.+|. ++..++
T Consensus 373 ~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~----l~~~~~vvv~C~~G~-ra~~a~--- 444 (474)
T 3tp9_A 373 YANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHD----VPRDGSVCVYCRTGG-RSAIAA--- 444 (474)
T ss_dssp CEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTGGG----SCSSSCEEEECSSSH-HHHHHH---
T ss_pred ccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHhc----CCCCCEEEEECCCCH-HHHHHH---
Confidence 467999999999887789999999999999999999999998877665443 478899999999885 444443
Q ss_pred HHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 85 ~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
..|+. +||++|++|+||+.+|.++|+|+++
T Consensus 445 -~~L~~----~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 445 -SLLRA----HGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp -HHHHH----HTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred -HHHHH----cCCCCEEEecChHHHHHhCCCCCCC
Confidence 44544 8999999999999999999999864
No 46
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=5.5e-21 Score=144.96 Aligned_cols=113 Identities=19% Similarity=0.330 Sum_probs=87.1
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCc-----------CCCccCCccccCcc-------chh---------HHHHHHHH
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSD-------SFT---------DKIFDLIQ 58 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~-----------~~~hI~gai~ip~~-------~~~---------~~~~~~~~ 58 (132)
..|+++++.+++..++.+|||+|++.|| ..||||||+|+|.. .+. ..+...+.
T Consensus 272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 351 (423)
T 2wlr_A 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWK 351 (423)
T ss_dssp GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHH
T ss_pred heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHH
Confidence 3489999999888778999999999999 89999999999875 111 13444442
Q ss_pred --HhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh-cCCCccccCCCcccc
Q 032854 59 --EVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCTDVPCKE 127 (132)
Q Consensus 59 --~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~-~g~p~~~~~~~~~~~ 127 (132)
.++++++||+||.+|. ++..++ ..|+. +||++|++|+||+.+|.. .++|++++...|.+-
T Consensus 352 ~~~~~~~~~ivvyC~sG~-rs~~aa----~~L~~----~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~~~~~ 414 (423)
T 2wlr_A 352 AWNIKPEQQVSFYCGTGW-RASETF----MYARA----MGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSS 414 (423)
T ss_dssp TTTCCTTSEEEEECSSSH-HHHHHH----HHHHH----TTCSSEEEESSHHHHHTTSTTSCEECSSCCC---
T ss_pred HcCCCCCCcEEEECCcHH-HHHHHH----HHHHH----cCCCCcceeCccHHHHhcCCCCCcccCCCCCChh
Confidence 2467899999999885 554444 34444 999999999999999998 899999987766554
No 47
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.83 E-value=2.2e-21 Score=142.39 Aligned_cols=107 Identities=19% Similarity=0.300 Sum_probs=84.6
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCcCC----------------CccCCccccCccchh---------HHHHHHHHHh
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSFT---------DKIFDLIQEV 60 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~~~----------------~hI~gai~ip~~~~~---------~~~~~~~~~~ 60 (132)
..++++++.+++.++ +|||+|++.||.. ||||||+|+|...+. +.+...+..+
T Consensus 179 ~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l 256 (318)
T 3hzu_A 179 IRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFI 256 (318)
T ss_dssp TBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTC
T ss_pred ccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCC
Confidence 357899999998764 8999999999987 999999999987542 2455544456
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhh-cCCccEEEeccchhhhhh-cCCCccccCCC
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKED-TGINSIFVLERGFKGWEA-SGKPVCRCTDV 123 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~-~G~~~v~~l~gG~~~w~~-~g~p~~~~~~~ 123 (132)
+++++||+||++|. ++..++ ..| .+ +||++|++|+||+.+|.. .++|++++...
T Consensus 257 ~~~~~ivvyC~sG~-rs~~a~----~~L----~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~~ 312 (318)
T 3hzu_A 257 NPDDQTVVYCRIGE-RSSHTW----FVL----THLLGKADVRNYDGSWTEWGNAVRVPIVAGEEP 312 (318)
T ss_dssp CTTCCCEEECSSSH-HHHHHH----HHH----HHTSCCSSCEECTTHHHHHTTSTTCCCBCSSSC
T ss_pred CCCCcEEEEcCChH-HHHHHH----HHH----HHHcCCCCeeEeCCcHHHHhcCCCCCcccCCCC
Confidence 78899999999885 444443 223 33 799999999999999995 79999998654
No 48
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.83 E-value=2.9e-21 Score=140.82 Aligned_cols=103 Identities=21% Similarity=0.260 Sum_probs=82.7
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCc-----------CCCccCCccccCccchhH---------HHHHHHHH--hcCC
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTD---------KIFDLIQE--VRGK 63 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~-----------~~~hI~gai~ip~~~~~~---------~~~~~~~~--~~~~ 63 (132)
..++++++.+++..++.+|||+|++.|| ..||||||+|+|...+.+ .+...+.. ++++
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS 254 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTT
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCC
Confidence 4589999999887667899999999999 789999999999887632 34444443 4678
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCc
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPV 117 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~ 117 (132)
++||+||++|. ++..++ ..|+ .+||++|++|+||+.+|..+++|.
T Consensus 255 ~~iv~yC~sG~-rs~~a~----~~L~----~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 255 KPLVATCGSGV-TACHVA----LGAY----LCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp SCEEEECSSSS-TTHHHH----HHHH----TTTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCEEEECCChH-HHHHHH----HHHH----HcCCCCeeEeCCcHHHHhhccCCC
Confidence 99999999987 555444 3343 399999999999999999998875
No 49
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.82 E-value=1.6e-20 Score=140.54 Aligned_cols=108 Identities=14% Similarity=0.223 Sum_probs=84.0
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCC--------CCCcCCCccCCccccCccc-hhH---------------HHHHHHHH-
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRD--------DERSYDGHITGSLHYPSDS-FTD---------------KIFDLIQE- 59 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~--------~~e~~~~hI~gai~ip~~~-~~~---------------~~~~~~~~- 59 (132)
...||++++.+++.+ ++|||+|+ +.+|..||||||+|+|... +.. .+...+..
T Consensus 13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~ 90 (373)
T 1okg_A 13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMAN 90 (373)
T ss_dssp CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHT
T ss_pred CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHc
Confidence 467999999998875 89999998 6899999999999999875 532 33444433
Q ss_pred -hcCCCEEEEEc-CCCCCCcH-HHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCCCc
Q 032854 60 -VRGKDTLVFHC-ALSQVRGP-TCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (132)
Q Consensus 60 -~~~~~~ivv~c-~~g~~~~~-~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (132)
++++++||||| ..|. ++. .++ +.|+. +|| +|++|+||+.+|..+|+|++++...+
T Consensus 91 gi~~d~~VVvYc~~~G~-rsa~ra~----~~L~~----~G~-~V~~L~GG~~aW~~~g~pv~~~~~~~ 148 (373)
T 1okg_A 91 GMAGELPVLCYDDECGA-MGGCRLW----WMLNS----LGA-DAYVINGGFQACKAAGLEMESGEPSS 148 (373)
T ss_dssp TCSSSSCEEEECSSTTT-TTHHHHH----HHHHH----HTC-CEEEETTTTHHHHTTTCCEECSCCCS
T ss_pred CCCCCCeEEEEeCCCCc-hHHHHHH----HHHHH----cCC-eEEEeCCCHHHHHhhcCCcccCCCCc
Confidence 36789999999 5554 443 443 44544 899 99999999999999999998875443
No 50
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.82 E-value=5e-21 Score=137.63 Aligned_cols=103 Identities=18% Similarity=0.314 Sum_probs=79.3
Q ss_pred ccHHHHHhhhCCCCeEEEeeCCCCCcCC----------------CccCCccccCccchh---------HHHHHHHHH--h
Q 032854 8 ISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSFT---------DKIFDLIQE--V 60 (132)
Q Consensus 8 is~~~~~~~~~~~~~~liD~R~~~e~~~----------------~hI~gai~ip~~~~~---------~~~~~~~~~--~ 60 (132)
++++++.+++..++ |||+|++.+|.. ||||||+|+|...+. ..+...+.. +
T Consensus 146 ~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~ 223 (277)
T 3aay_A 146 AFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGL 223 (277)
T ss_dssp ECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTC
T ss_pred cCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 78999999887644 999999999874 999999999987542 244444443 4
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh-cCCCcccc
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 120 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~-~g~p~~~~ 120 (132)
+++++||+||.+|. ++..++ ..|+ ..+||++|++|+||+.+|.. +++|++++
T Consensus 224 ~~~~~iv~yC~~G~-rs~~a~----~~L~---~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 224 DNSKETIAYCRIGE-RSSHTW----FVLR---ELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp CTTSCEEEECSSHH-HHHHHH----HHHH---TTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCEEEEcCcHH-HHHHHH----HHHH---HHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 67899999999875 443333 3332 02899999999999999998 99999875
No 51
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.82 E-value=1.2e-20 Score=132.48 Aligned_cols=97 Identities=19% Similarity=0.242 Sum_probs=76.9
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCCcCC----------CccCCccccCccchhHH---HHHHHHHhcCCCEEEEEcCC
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDERSYD----------GHITGSLHYPSDSFTDK---IFDLIQEVRGKDTLVFHCAL 72 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e~~~----------~hI~gai~ip~~~~~~~---~~~~~~~~~~~~~ivv~c~~ 72 (132)
..++++++.+ +.+|||+|++.||.. ||||||+|+|...+... +... .++++++||+||++
T Consensus 121 ~~i~~~e~~~-----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~e~~~~~--~~~~~~~iv~~C~~ 193 (230)
T 2eg4_A 121 WLLTADEAAR-----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPEGLLERL--GLQPGQEVGVYCHS 193 (230)
T ss_dssp GBCCHHHHHT-----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCTTHHHHH--TCCTTCEEEEECSS
T ss_pred ceeCHHHHhh-----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChHHHHHhc--CCCCCCCEEEEcCC
Confidence 3578888876 578999999999998 99999999999887543 2211 34678999999998
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 73 SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 73 g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
|. ++..++ ..|++ +| .+|++|+||+.+|..+++|+++
T Consensus 194 G~-rs~~a~----~~L~~----~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 194 GA-RSAVAF----FVLRS----LG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp SH-HHHHHH----HHHHH----TT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred hH-HHHHHH----HHHHH----cC-CCcEEecCcHHHHhhcCCCCCC
Confidence 75 444443 44544 89 8999999999999999999863
No 52
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.81 E-value=2.1e-20 Score=124.58 Aligned_cols=118 Identities=17% Similarity=0.213 Sum_probs=79.9
Q ss_pred CcccccHHHHHhhhCCC--CeEEEeeCCCCCcCCCccCCccccCccchhH-----HHH--------HHHHHhcCCCEEEE
Q 032854 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIF--------DLIQEVRGKDTLVF 68 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~--~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-----~~~--------~~~~~~~~~~~ivv 68 (132)
....|+++++.+++..+ +.+|||||++.||..||||||+|||...+.. .+. .++......+.||+
T Consensus 13 ~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VVv 92 (157)
T 1whb_A 13 EKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 92 (157)
T ss_dssp CCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEEE
T ss_pred cCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEEE
Confidence 36779999999999865 7999999999999999999999999876532 111 11122224456999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHhhhc----CCc-cEEEeccchhhhhhcCCCccccCCC
Q 032854 69 HCALSQVRGPTCAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVCRCTDV 123 (132)
Q Consensus 69 ~c~~g~~~~~~~a~~l~~~L~~~~~~~----G~~-~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (132)
||..+..++..++. +...|.+.|.+. |+. +|++|+|||.+|... +|..+....
T Consensus 93 y~~~~~~~~~~a~~-~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~~ 150 (157)
T 1whb_A 93 LDWFSSAKDLQIGT-TLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNAK 150 (157)
T ss_dssp ECSSCCGGGCCTTC-HHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCCC
T ss_pred ECCCCCcccccccc-HHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCCC
Confidence 99876531211111 123343222333 444 499999999999986 888766543
No 53
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.81 E-value=3.4e-20 Score=123.65 Aligned_cols=116 Identities=16% Similarity=0.209 Sum_probs=77.0
Q ss_pred CcccccHHHHHhhhCCC--CeEEEeeCCCCCcCCCccCCccccCccchhH-----HHHH--------HHHHhcCCCEEEE
Q 032854 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIFD--------LIQEVRGKDTLVF 68 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~--~~~liD~R~~~e~~~~hI~gai~ip~~~~~~-----~~~~--------~~~~~~~~~~ivv 68 (132)
....|+++++.+++..+ +.+|||+|++.||..||||||+|||...+.. .+.. ++....+.+.||+
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEEE
Confidence 46789999999988755 7999999999999999999999999876532 1111 1111223456999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHhhhc----CCc-cEEEeccchhhhhhcCCCccccC
Q 032854 69 HCALSQVRGPTCAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 69 ~c~~g~~~~~~~a~~l~~~L~~~~~~~----G~~-~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
||..+..++..++. ....|.+.|.+. |+. +|++|+|||.+|... +|.....
T Consensus 98 y~~~~~~~~~~a~~-~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~ 153 (157)
T 2gwf_A 98 LDWFSSAKDLQIGT-TLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN 153 (157)
T ss_dssp ECSSCCGGGCCTTC-HHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBSC
T ss_pred EcCCCCccccCccc-HHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcCC
Confidence 99876531211111 112333222333 344 499999999999985 7776543
No 54
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.80 E-value=6.2e-20 Score=139.17 Aligned_cols=108 Identities=18% Similarity=0.292 Sum_probs=84.9
Q ss_pred ccccHHHHHhhhC--------CCCeEEEeeC--CCCCcCCCccCCccccCccchhH----------HHHHHHHH--hcCC
Q 032854 6 SYISGSQLLSLKR--------RPNIAVIDVR--DDERSYDGHITGSLHYPSDSFTD----------KIFDLIQE--VRGK 63 (132)
Q Consensus 6 ~~is~~~~~~~~~--------~~~~~liD~R--~~~e~~~~hI~gai~ip~~~~~~----------~~~~~~~~--~~~~ 63 (132)
..++++++.+++. +++.+|||+| ++.+|..||||||+|+|...+.. .+...+.. ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4689999998876 3478999999 99999999999999999887632 34444433 3678
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
++||+||.+|. ++..++ ..|+. +||++|++|+||+.+|..+++|++++..
T Consensus 204 ~~ivvyC~~G~-~a~~~~----~~L~~----~G~~~v~~l~Gg~~~W~~~g~pv~~g~~ 253 (423)
T 2wlr_A 204 TTVILYGRDVY-AAARVA----QIMLY----AGVKDVRLLDGGWQTWSDAGLPVERGTP 253 (423)
T ss_dssp SEEEEECSSHH-HHHHHH----HHHHH----HTCSCEEEETTTHHHHHHTTCCCBCSSC
T ss_pred CeEEEECCCch-HHHHHH----HHHHH----cCCCCeEEECCCHHHHhhCCCCcccCCC
Confidence 99999998664 433333 44544 8999999999999999999999998643
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.80 E-value=2.8e-20 Score=124.05 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=73.9
Q ss_pred CcccccHHHHHhhhC--------CCCeEEEeeCCCCCcCCCccCCccccCccchh--HHHHH-------HHH------Hh
Q 032854 4 SISYISGSQLLSLKR--------RPNIAVIDVRDDERSYDGHITGSLHYPSDSFT--DKIFD-------LIQ------EV 60 (132)
Q Consensus 4 ~~~~is~~~~~~~~~--------~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~--~~~~~-------~~~------~~ 60 (132)
.+..|+++++.+++. +++.+|||+|++.+|..||||||+|+|...+. ..+.. ++. .+
T Consensus 9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 88 (158)
T ss_dssp --CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSS
T ss_pred CCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHH
Confidence 478899999999987 34689999999999999999999999998763 12111 110 00
Q ss_pred --cCCCEEEEEcCCCCCCc----HHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCC
Q 032854 61 --RGKDTLVFHCALSQVRG----PTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGK 115 (132)
Q Consensus 61 --~~~~~ivv~c~~g~~~~----~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~ 115 (132)
..+++||+||.+|.... ...+..++..|.. .|| +|++|.||+.+|..+..
T Consensus 89 ~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~----~G~-~v~~L~GG~~~W~~~~p 144 (158)
T 3tg1_B 89 KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKR----EGK-EPLVLKGGLSSFKQNHE 144 (158)
T ss_dssp TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHT----TTC-CEEEETTHHHHHTSSCG
T ss_pred hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHh----CCC-cEEEeCCcHHHHHHHhh
Confidence 13689999999885210 0012233455544 899 79999999999977643
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.78 E-value=7.8e-20 Score=142.27 Aligned_cols=95 Identities=18% Similarity=0.345 Sum_probs=78.8
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
.++.|+++++.++ +++.+|||+|++.||..+|||||+|+|...+.+.+.. ++++++||+||.+|. ++..++
T Consensus 471 ~~~~i~~~~~~~~--~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~----~~~~~~iv~~c~~g~-rs~~a~-- 541 (565)
T 3ntd_A 471 DATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHE----LPKDKEIIIFSQVGL-RGNVAY-- 541 (565)
T ss_dssp SCCEECTTTTTSC--CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGG----SCTTSEEEEECSSSH-HHHHHH--
T ss_pred ccceeeHHHHHhC--CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhh----cCCcCeEEEEeCCch-HHHHHH--
Confidence 3567888888877 5579999999999999999999999999888765554 378899999999875 555554
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcC
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g 114 (132)
..|++ .|| +|++|+||+.+|..+|
T Consensus 542 --~~l~~----~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 542 --RQLVN----NGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp --HHHHH----TTC-CEEEETTHHHHHHHTC
T ss_pred --HHHHH----cCC-CEEEEcChHHHHHhCc
Confidence 45544 899 9999999999998875
No 57
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.75 E-value=2.2e-19 Score=140.65 Aligned_cols=96 Identities=24% Similarity=0.373 Sum_probs=78.9
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~ 83 (132)
.++.|+++++.+++.+ +.+|||+|++.||..||||||+|+|...+.+.+.. ++++++||+||.+|. ++..++
T Consensus 487 ~~~~i~~~~~~~~~~~-~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~~~----l~~~~~iv~~C~~g~-rs~~a~-- 558 (588)
T 3ics_A 487 FVDTVQWHEIDRIVEN-GGYLIDVREPNELKQGMIKGSINIPLDELRDRLEE----VPVDKDIYITCQLGM-RGYVAA-- 558 (588)
T ss_dssp SCCEECTTTHHHHHHT-TCEEEECSCGGGGGGCBCTTEEECCHHHHTTCGGG----SCSSSCEEEECSSSH-HHHHHH--
T ss_pred ccceecHHHHHHHhcC-CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHHhh----CCCCCeEEEECCCCc-HHHHHH--
Confidence 4678999999998864 68999999999999999999999998777655444 478899999998874 555554
Q ss_pred HHHHHHHHhhhcCCccEEEeccchhhhhhcC
Q 032854 84 LANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (132)
Q Consensus 84 l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g 114 (132)
..|++ .||+ |++|+||+.+|....
T Consensus 559 --~~l~~----~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 559 --RMLME----KGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp --HHHHH----TTCC-EEEETTHHHHHHHHC
T ss_pred --HHHHH----cCCc-EEEEcchHHHHHhhh
Confidence 45544 8998 999999999998763
No 58
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.74 E-value=5e-19 Score=132.40 Aligned_cols=93 Identities=20% Similarity=0.363 Sum_probs=71.9
Q ss_pred CCCeEEEeeCCCCCcC-----------CCccCCccccCccchh------------HHHHHHHHHh----cC---CCEEEE
Q 032854 19 RPNIAVIDVRDDERSY-----------DGHITGSLHYPSDSFT------------DKIFDLIQEV----RG---KDTLVF 68 (132)
Q Consensus 19 ~~~~~liD~R~~~e~~-----------~~hI~gai~ip~~~~~------------~~~~~~~~~~----~~---~~~ivv 68 (132)
.++.+|||+|++.||. .||||||+|+|...+. ..+...+..+ ++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4467899999999999 9999999999998764 2354444432 56 889999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh-cCCCcccc
Q 032854 69 HCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 120 (132)
Q Consensus 69 ~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~-~g~p~~~~ 120 (132)
||++|. ++..++ ..|+. +||++|++|+||+..|.. .++|++++
T Consensus 252 yC~sG~-rs~~a~----~~L~~----~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 252 SCGSGV-TACINI----ALVHH----LGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp ECSSSS-THHHHH----HHHHH----TTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred ECCchH-HHHHHH----HHHHH----cCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 999986 665554 33433 899999999999999987 68887655
No 59
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.74 E-value=2.4e-18 Score=120.76 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=67.5
Q ss_pred CCCeEEEeeCCCCCcCCCccCCccccCcc--chh-----------HHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHH
Q 032854 19 RPNIAVIDVRDDERSYDGHITGSLHYPSD--SFT-----------DKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLA 85 (132)
Q Consensus 19 ~~~~~liD~R~~~e~~~~hI~gai~ip~~--~~~-----------~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~ 85 (132)
+++.+|||+|++.+|..||||||+|+|.. .+. +.+...+..+..+++||+||.+|..++..+ +
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a----~ 79 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRT----A 79 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHH----H
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHH----H
Confidence 45789999999999999999999999988 432 244555555556889999999875223222 3
Q ss_pred HHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 86 NYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 86 ~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
.. |+ +||++|++|+|| |.. +|++++..
T Consensus 80 ~~----L~-~G~~~v~~l~GG---W~~--~p~~~~~~ 106 (230)
T 2eg4_A 80 FF----LG-LGGLEVQLWTEG---WEP--YATEKEEP 106 (230)
T ss_dssp HH----HH-HTTCCEEEECSS---CGG--GCCBCSCC
T ss_pred HH----HH-cCCceEEEeCCC---Ccc--CcccCCCC
Confidence 33 35 799999999999 977 88866544
No 60
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.72 E-value=4.2e-19 Score=136.14 Aligned_cols=87 Identities=20% Similarity=0.401 Sum_probs=0.0
Q ss_pred HHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHh
Q 032854 13 LLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVK 92 (132)
Q Consensus 13 ~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~ 92 (132)
+.+++.+++.+|||+|++.||..||||||+|+|...+.+.+..+ +++++||+||.+|. ++..++ ..|++
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~iv~~C~~G~-rs~~a~----~~L~~-- 447 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPF----NKNDVIYVHCQSGI-RSSIAI----GILEH-- 447 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHHhhC----CCCCeEEEECCCCh-HHHHHH----HHHHH--
Confidence 44455556789999999999999999999999998887766554 67899999999886 555554 34444
Q ss_pred hhcCCccEEEeccchhhhhh
Q 032854 93 EDTGINSIFVLERGFKGWEA 112 (132)
Q Consensus 93 ~~~G~~~v~~l~gG~~~w~~ 112 (132)
.||++|++|+||+.+|.+
T Consensus 448 --~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 448 --KGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp --------------------
T ss_pred --cCCCCEEEecChHHHHhh
Confidence 899999999999999975
No 61
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.70 E-value=5.6e-18 Score=129.91 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=83.4
Q ss_pred CcccccHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccc-hhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHH
Q 032854 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAK 82 (132)
Q Consensus 4 ~~~~is~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~-~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~ 82 (132)
.++.||++|+.+++.. + +|||+|++.+|..||||||+|+|... |..++.++. +++++|||||..+. + .
T Consensus 271 ~~~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l~---~~~~~vvvy~~~~~--~----~ 339 (474)
T 3tp9_A 271 ERVDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLL---PADRPIHLLAADAI--A----P 339 (474)
T ss_dssp EECCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHHC---CSSSCEEEECCTTT--H----H
T ss_pred CCceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhcC---CCCCeEEEEECCCc--H----H
Confidence 3567999999999876 4 99999999999999999999999884 666666664 67889999998763 2 2
Q ss_pred HHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccC
Q 032854 83 RLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (132)
Q Consensus 83 ~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (132)
++++.|+. +||++|+++.+|+.+|..++.|+....
T Consensus 340 ~~~~~L~~----~G~~~v~~~l~G~~~W~~~g~~~~~~~ 374 (474)
T 3tp9_A 340 DVIRALRS----IGIDDVVDWTDPAAVDRAAPDDVASYA 374 (474)
T ss_dssp HHHHHHHH----TTCCCEEEEECGGGGTTCCGGGEECCE
T ss_pred HHHHHHHH----cCCcceEEecCcHHHHHhccccccccc
Confidence 24456655 999999986669999999988876543
No 62
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.70 E-value=6.6e-17 Score=118.96 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=82.6
Q ss_pred cccccHHHHHhhhCC---CCeEEEeeCC---------CCCc-CCCccCCccccCccchh-------------HHHHHHHH
Q 032854 5 ISYISGSQLLSLKRR---PNIAVIDVRD---------DERS-YDGHITGSLHYPSDSFT-------------DKIFDLIQ 58 (132)
Q Consensus 5 ~~~is~~~~~~~~~~---~~~~liD~R~---------~~e~-~~~hI~gai~ip~~~~~-------------~~~~~~~~ 58 (132)
.+.|||+++.+++.. ..+++||++= ..|| +++|||||++++++.+. +.+.+.+.
T Consensus 27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~ 106 (327)
T 3utn_X 27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS 106 (327)
T ss_dssp CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 346999999999862 3589999862 1355 78999999998877542 34555555
Q ss_pred H--hcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 59 E--VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 59 ~--~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
. ++++++||||++.+...+ .++++.|+. +|+++|++|+|| .+|.++|+|++++..
T Consensus 107 ~lGI~~d~~VVvYD~~~~~~A----aR~wW~Lr~----~Gh~~V~vLdGg-~aW~~~g~p~~~~~~ 163 (327)
T 3utn_X 107 NLGVQKDDILVVYDRVGNFSS----PRCAWTLGV----MGHPKVYLLNNF-NQYREFKYPLDSSKV 163 (327)
T ss_dssp HTTCCTTCEEEEECSSSSSSH----HHHHHHHHH----TTCSEEEEESCH-HHHHHTTCCCBCCCC
T ss_pred HcCCCCCCEEEEEeCCCCcHH----HHHHHHHHH----cCCCceeecccH-HHHHHhCCCcccCCc
Confidence 5 368899999998776443 344556655 999999999876 899999999988754
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.60 E-value=5.8e-16 Score=113.94 Aligned_cols=101 Identities=18% Similarity=0.353 Sum_probs=70.9
Q ss_pred cccHHHHHhhhCCC----CeEEEeeCCCCCcC-----------CCccCCccccCccchh-----------HH----HHHH
Q 032854 7 YISGSQLLSLKRRP----NIAVIDVRDDERSY-----------DGHITGSLHYPSDSFT-----------DK----IFDL 56 (132)
Q Consensus 7 ~is~~~~~~~~~~~----~~~liD~R~~~e~~-----------~~hI~gai~ip~~~~~-----------~~----~~~~ 56 (132)
.++.+++++.+..+ +.+|||+|++.+|. .||||||+|+|...+. +. +.+.
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 36778888877642 46899999987773 5999999999987642 11 2222
Q ss_pred HH----HhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCC
Q 032854 57 IQ----EVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKP 116 (132)
Q Consensus 57 ~~----~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p 116 (132)
+. .++.+++||+||++|.+ +. ...++ | +.+|++++.+++|+|..|.....|
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvt-A~--~~~la--L----~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVS-GV--IIKTA--L----ELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHH-HH--HHHHH--H----HHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHhhcCCCCCCCEEEECChHHH-HH--HHHHH--H----HHcCCCCceeCCCcHHHhccccCC
Confidence 22 23578899999998852 22 21222 3 238999999999999999875444
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.27 E-value=7.5e-13 Score=101.44 Aligned_cols=80 Identities=20% Similarity=0.199 Sum_probs=57.3
Q ss_pred CCCeEEEeeCCCCCcCCCccCCccccCccc-hhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCC
Q 032854 19 RPNIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI 97 (132)
Q Consensus 19 ~~~~~liD~R~~~e~~~~hI~gai~ip~~~-~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~ 97 (132)
+++++|||+|++.+|..||||||+|+|... +..++.++. +++++||+||. +. + +.++++.|+. +||
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~~---~~~~~vvly~~-~~-~----a~~a~~~L~~----~G~ 360 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYL---NYDQEINLIGD-YH-L----VSKATHTLQL----IGY 360 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTTC---CTTSCEEEESC-HH-H----HHHHHHHHHT----TTC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhcc---CCCCeEEEEEC-Cc-h----HHHHHHHhhh----hhc
Confidence 356899999999999999999999999874 555555443 67899999997 32 2 3344556654 999
Q ss_pred ccEEE-eccchhhhh
Q 032854 98 NSIFV-LERGFKGWE 111 (132)
Q Consensus 98 ~~v~~-l~gG~~~w~ 111 (132)
++|+. ++|+...|.
T Consensus 361 ~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 361 DDIAGYQLPQSKIQT 375 (466)
T ss_dssp CCEEEEECCC-----
T ss_pred ccccccccCcccccH
Confidence 99996 666554443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.93 E-value=6.7e-06 Score=53.99 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=46.2
Q ss_pred cccHHHHHhhhCCCCeEEEeeCCCCCc------------CCC-ccCCccccCccch---hHHHHHHHHHh-cCCCEEEEE
Q 032854 7 YISGSQLLSLKRRPNIAVIDVRDDERS------------YDG-HITGSLHYPSDSF---TDKIFDLIQEV-RGKDTLVFH 69 (132)
Q Consensus 7 ~is~~~~~~~~~~~~~~liD~R~~~e~------------~~~-hI~gai~ip~~~~---~~~~~~~~~~~-~~~~~ivv~ 69 (132)
.++++++..+.+.+-..|||+|++.|. ... +|+|.+|+|.... ...+..+...+ ..+.+|++|
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~~~~~~~~~~~l~~~~~pVlvH 108 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAY 108 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHHHHHHHHHTSCSSEEEE
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 467777776655444689999987662 223 5888999997642 12333333333 347899999
Q ss_pred cCCCCCCcH
Q 032854 70 CALSQVRGP 78 (132)
Q Consensus 70 c~~g~~~~~ 78 (132)
|.+|. ++.
T Consensus 109 C~sG~-Rs~ 116 (156)
T 2f46_A 109 CRTGT-RCS 116 (156)
T ss_dssp CSSSH-HHH
T ss_pred CCCCC-CHH
Confidence 99997 544
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=94.33 E-value=0.19 Score=31.70 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=37.8
Q ss_pred cHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCc--cccCccch--------hHHHHHHHHHhcCCCEEEEEcCCCCCCcH
Q 032854 9 SGSQLLSLKRRPNIAVIDVRDDERSYDGHITGS--LHYPSDSF--------TDKIFDLIQEVRGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 9 s~~~~~~~~~~~~~~liD~R~~~e~~~~hI~ga--i~ip~~~~--------~~~~~~~~~~~~~~~~ivv~c~~g~~~~~ 78 (132)
+++++..+.+.+=..|||+|+..+......+|- +++|..+. ...+..+......+.+|+|+|..|..|+.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg 103 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG 103 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
Confidence 456665554444457999999765433333332 22333221 11222222223467899999998875554
No 67
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=93.82 E-value=0.0051 Score=40.86 Aligned_cols=25 Identities=32% Similarity=0.304 Sum_probs=22.2
Q ss_pred eEEEeeCCCCCcCCCccCCccccCccchh
Q 032854 22 IAVIDVRDDERSYDGHITGSLHYPSDSFT 50 (132)
Q Consensus 22 ~~liD~R~~~e~~~~hI~gai~ip~~~~~ 50 (132)
.++||+|...||. |||+|+|...++
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE 146 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVE 146 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHH
Confidence 4899999999998 999999988754
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=93.50 E-value=0.38 Score=30.19 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=37.5
Q ss_pred cHHHHHhhhCCCCeEEEeeCCCCCcCCCccCC--ccccCccc--------hhHHHHHHHHHhcCCCEEEEEcCCCCCCcH
Q 032854 9 SGSQLLSLKRRPNIAVIDVRDDERSYDGHITG--SLHYPSDS--------FTDKIFDLIQEVRGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 9 s~~~~~~~~~~~~~~liD~R~~~e~~~~hI~g--ai~ip~~~--------~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~ 78 (132)
+++++..+.+.+=..|||+|...++....+++ -.++|..+ +.+.+..+......+.+|+|+|..|..|+.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg 104 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG 104 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHH
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHH
Confidence 44555444444445799999886543222221 23344322 112222222223467899999998875654
Q ss_pred H
Q 032854 79 T 79 (132)
Q Consensus 79 ~ 79 (132)
.
T Consensus 105 ~ 105 (151)
T 2img_A 105 T 105 (151)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=88.62 E-value=0.67 Score=29.25 Aligned_cols=73 Identities=11% Similarity=0.174 Sum_probs=37.5
Q ss_pred ccHHHHHhhhCCCCeEEEeeCCCCCcCCC--cc--CC--ccccCccc-------hh-HHHHHHHHHh--cCCCEEEEEcC
Q 032854 8 ISGSQLLSLKRRPNIAVIDVRDDERSYDG--HI--TG--SLHYPSDS-------FT-DKIFDLIQEV--RGKDTLVFHCA 71 (132)
Q Consensus 8 is~~~~~~~~~~~~~~liD~R~~~e~~~~--hI--~g--ai~ip~~~-------~~-~~~~~~~~~~--~~~~~ivv~c~ 71 (132)
.+++++..+.+.+=..|||+|+..+.... .. .| -+++|..+ +. ..+...+..+ ..+.+|+++|.
T Consensus 21 ~~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~ 100 (151)
T 1xri_A 21 PDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCK 100 (151)
T ss_dssp CCHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECS
T ss_pred cCccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECC
Confidence 44555544433334579999987664210 00 11 12344322 11 2333333332 24679999999
Q ss_pred CCCCCcHHH
Q 032854 72 LSQVRGPTC 80 (132)
Q Consensus 72 ~g~~~~~~~ 80 (132)
.|..|+...
T Consensus 101 aG~~RTg~~ 109 (151)
T 1xri_A 101 RGKHRTGCL 109 (151)
T ss_dssp SSSSHHHHH
T ss_pred CCCCHHHHH
Confidence 997565443
No 70
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=88.08 E-value=1.9 Score=27.55 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=14.3
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.+|+|+|..|..|+.
T Consensus 87 ~~~~~VlVHC~aG~~RSg 104 (164)
T 2hcm_A 87 RDGGSCLVYCKNGRSRSA 104 (164)
T ss_dssp HTTCEEEEEESSSSHHHH
T ss_pred HcCCEEEEECCCCCchHH
Confidence 467899999999965654
No 71
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=87.28 E-value=1.2 Score=27.92 Aligned_cols=18 Identities=11% Similarity=0.242 Sum_probs=14.5
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.+|+|+|..|..|+.
T Consensus 79 ~~~~~VlVHC~~G~~RS~ 96 (145)
T 2nt2_A 79 KHGSKCLVHSKMGVSRSA 96 (145)
T ss_dssp HTTCEEEEECSSSSSHHH
T ss_pred HcCCeEEEECCCCCchHH
Confidence 467899999999966664
No 72
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=86.48 E-value=1.5 Score=27.31 Aligned_cols=18 Identities=11% Similarity=0.217 Sum_probs=14.3
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.+|+|+|..|..|+.
T Consensus 79 ~~~~~VlVHC~~G~~RS~ 96 (144)
T 3ezz_A 79 DCRGRVLVHSQAGISRSA 96 (144)
T ss_dssp HTTCCEEEEESSSSSHHH
T ss_pred hcCCeEEEECCCCCChhH
Confidence 457899999999976654
No 73
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=85.55 E-value=2.3 Score=26.72 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=15.1
Q ss_pred cCCCEEEEEcCCCCCCcHHH
Q 032854 61 RGKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~ 80 (132)
..+.+|+|+|..|..|+...
T Consensus 87 ~~~~~vlVHC~~G~~Rsg~~ 106 (157)
T 3rgo_A 87 ALGQCVYVHCKAGRSRSATM 106 (157)
T ss_dssp HTTCEEEEESSSSSSHHHHH
T ss_pred HCCCEEEEECCCCCChHHHH
Confidence 46689999999997565543
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=85.14 E-value=1.9 Score=27.48 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 82 ~~~~~VlVHC~aG~~RSg~ 100 (160)
T 1yz4_A 82 LNGGNCLVHSFAGISRSTT 100 (160)
T ss_dssp HTTCCEEEEETTSSSHHHH
T ss_pred HcCCeEEEECCCCCchHHH
Confidence 4578999999999666653
No 75
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=84.90 E-value=0.6 Score=33.48 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=19.6
Q ss_pred cccccHHHHHhhhCCCCeEEEeeCCCCC
Q 032854 5 ISYISGSQLLSLKRRPNIAVIDVRDDER 32 (132)
Q Consensus 5 ~~~is~~~~~~~~~~~~~~liD~R~~~e 32 (132)
+..++++++..+..-+=..|||+|+..|
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E 80 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSRE 80 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHH
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhh
Confidence 4567888877665433457999998755
No 76
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=84.77 E-value=2.9 Score=26.03 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 79 ~~~~~VlVHC~~G~sRS~~ 97 (144)
T 3s4e_A 79 RKDGVVLVHSNAGVSRAAA 97 (144)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred HcCCeEEEEcCCCCchHHH
Confidence 4678999999999766543
No 77
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=83.86 E-value=1.5 Score=28.42 Aligned_cols=44 Identities=27% Similarity=0.462 Sum_probs=30.9
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~ 111 (132)
..|+++|....-||+.+...+...+. +.|..++.+...|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~----~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLK----DRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHH----HTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHH----HcCCCCeEEEecccCCcc
Confidence 46999998666578777655544443 478766778888888773
No 78
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=83.42 E-value=5.4 Score=26.19 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=15.0
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 95 ~~~~~VLVHC~aG~sRS~~ 113 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAA 113 (188)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred HcCCEEEEECCCCCchHHH
Confidence 4678999999999767653
No 79
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=83.28 E-value=2.7 Score=26.90 Aligned_cols=19 Identities=21% Similarity=0.337 Sum_probs=15.2
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 81 ~~~~~VlVHC~aG~~RSg~ 99 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVT 99 (165)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred HCCCeEEEECCCCCChhHH
Confidence 4678999999999766654
No 80
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=81.52 E-value=2.1 Score=27.69 Aligned_cols=45 Identities=20% Similarity=0.401 Sum_probs=31.6
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCC-ccEEEeccchhhhh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI-NSIFVLERGFKGWE 111 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~-~~v~~l~gG~~~w~ 111 (132)
...|+++|....-||+.+...+...+. +.|. +++.+...|...|.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~----~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLK----ERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHH----HHTCTTTEEEEEEESSCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHH----HcCCCCcEEEEecccCCCc
Confidence 457999998766678777655444443 3576 47888888988874
No 81
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=81.28 E-value=4.3 Score=26.88 Aligned_cols=20 Identities=20% Similarity=0.441 Sum_probs=14.7
Q ss_pred cCCCEEEEEcCCCCCCcHHH
Q 032854 61 RGKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~ 80 (132)
..+.+|+|+|..|..|+...
T Consensus 123 ~~~~~VlVHC~aG~~RSg~~ 142 (195)
T 2q05_A 123 QRNEPVLVHCAAGVNRSGAM 142 (195)
T ss_dssp HTTCCEEEECSSSSSHHHHH
T ss_pred HcCCcEEEEcCCCCChHHHH
Confidence 35789999999996565433
No 82
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=81.23 E-value=7.9 Score=24.29 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=13.8
Q ss_pred CCCEEEEEcCCCCCCcHH
Q 032854 62 GKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~ 79 (132)
++.+|+|+|..|..|+..
T Consensus 108 ~~~~vlVHC~aG~~RTg~ 125 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPI 125 (167)
T ss_dssp CCCEEEEECSSSSSHHHH
T ss_pred CCCcEEEECCCCCCHHHH
Confidence 378999999988656543
No 83
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=79.99 E-value=2.6 Score=27.20 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc-cEEEeccchhhh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~-~v~~l~gG~~~w 110 (132)
...|+++|....-||+.+...+...+ ...|.. ++.+...|...|
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~----~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLV----TDQNISENWRVDSAATSGY 49 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHH----HHTTCGGGEEEEEEESSST
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHH----HHcCCCCcEEEEeeecCcc
Confidence 35799999876667877765444444 347875 688888898887
No 84
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=79.77 E-value=7.4 Score=25.12 Aligned_cols=17 Identities=29% Similarity=0.616 Sum_probs=13.7
Q ss_pred CCEEEEEcCCCCCCcHH
Q 032854 63 KDTLVFHCALSQVRGPT 79 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~ 79 (132)
+.+|+|+|..|..|+..
T Consensus 115 ~~~VlVHC~~G~~RSg~ 131 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPT 131 (183)
T ss_dssp TCCEEEECSSSSSHHHH
T ss_pred CCeEEEECCCCcchHHH
Confidence 68999999999766544
No 85
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=79.08 E-value=2.1 Score=27.59 Aligned_cols=42 Identities=17% Similarity=0.383 Sum_probs=29.5
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc-cEEEeccchhhh
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~-~v~~l~gG~~~w 110 (132)
.|+++|....-||+.+...+...+. ..|.. ++.+...|...|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~----~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVK----KANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHH----HHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHH----hCCCCCcEEEEeeecCCc
Confidence 6899998766678777654444443 36764 677888888877
No 86
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=78.02 E-value=2.8 Score=27.14 Aligned_cols=43 Identities=26% Similarity=0.474 Sum_probs=30.3
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc-cEEEeccchhhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~-~v~~l~gG~~~w 110 (132)
..|+++|....-||+.+...+...+. +.|.. ++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~----~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLR----HRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHH----HTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHH----HCCCCCcEEEEecccCCC
Confidence 47999998766678777655554443 36654 578888888877
No 87
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=77.89 E-value=12 Score=24.40 Aligned_cols=73 Identities=11% Similarity=0.080 Sum_probs=36.4
Q ss_pred ccHHHHHhhhCC-CCeEEEeeCCCCCcC---------CCccC-CccccCccc-hhHHHHHHHHH--hcCCCEEEEEcCCC
Q 032854 8 ISGSQLLSLKRR-PNIAVIDVRDDERSY---------DGHIT-GSLHYPSDS-FTDKIFDLIQE--VRGKDTLVFHCALS 73 (132)
Q Consensus 8 is~~~~~~~~~~-~~~~liD~R~~~e~~---------~~hI~-gai~ip~~~-~~~~~~~~~~~--~~~~~~ivv~c~~g 73 (132)
-+.++..+++.. +-..||+++...... .-++| .--..|... +...+..+... ...+.+|+|+|..|
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i~~~~~pi~d~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC~aG 127 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAG 127 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSCEEEECCCCSSSCCCSHHHHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCcEEEEecCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 455566665553 334799999764311 11233 111111111 22222222211 25678999999988
Q ss_pred CCCcHHH
Q 032854 74 QVRGPTC 80 (132)
Q Consensus 74 ~~~~~~~ 80 (132)
..|+...
T Consensus 128 ~gRSg~~ 134 (189)
T 3rz2_A 128 LGRAPVL 134 (189)
T ss_dssp STTHHHH
T ss_pred CCHHHHH
Confidence 7665433
No 88
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=77.83 E-value=3.2 Score=26.85 Aligned_cols=43 Identities=14% Similarity=0.283 Sum_probs=30.5
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCC-ccEEEeccchhhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI-NSIFVLERGFKGW 110 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~-~~v~~l~gG~~~w 110 (132)
..|+++|....-||+.+...+...+. +.|. +++.+...|...|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~----~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQ----NHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHH----HTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHH----HcCCCCcEEEEeeecCCc
Confidence 46999998666578777655544443 3776 4788888888887
No 89
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=77.65 E-value=4.9 Score=25.98 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=14.3
Q ss_pred CCCEEEEEcCCCCCCcHHH
Q 032854 62 GKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~ 80 (132)
.+.+|+|+|..|..|+...
T Consensus 107 ~~~~VlVHC~aG~~RSg~~ 125 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAM 125 (176)
T ss_dssp HTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEECCcCCCHHHHH
Confidence 4689999999996665433
No 90
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=77.16 E-value=3.5 Score=26.61 Aligned_cols=43 Identities=9% Similarity=0.126 Sum_probs=30.6
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc-c-EEEeccchhhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-S-IFVLERGFKGW 110 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~-~-v~~l~gG~~~w 110 (132)
..|+++|....-||+.+...+...+. +.|.. + +.+...|...|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~----~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVE----KANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHH----HTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHH----HcCCCCCeEEEEeccccCC
Confidence 46999998766678777655554443 37774 4 88888888877
No 91
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=76.56 E-value=13 Score=24.33 Aligned_cols=20 Identities=15% Similarity=0.315 Sum_probs=15.6
Q ss_pred cCCCEEEEEcCCCCCCcHHH
Q 032854 61 RGKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~ 80 (132)
..+.+|+|+|..|..|+...
T Consensus 115 ~~g~~VLVHC~~G~sRS~tv 134 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATL 134 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHH
T ss_pred hcCCeEEEECCCCCChHHHH
Confidence 46789999999997676543
No 92
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=74.06 E-value=7.8 Score=25.79 Aligned_cols=19 Identities=11% Similarity=-0.032 Sum_probs=14.3
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 131 ~~~~~VlVHC~aG~gRTg~ 149 (212)
T 1fpz_A 131 KNYRKTLIHSYGGLGRSCL 149 (212)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred hCCCCEEEECCCCCCHHHH
Confidence 4678999999988655443
No 93
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=73.80 E-value=12 Score=23.88 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=13.5
Q ss_pred CCCEEEEEcCCCCCCcH
Q 032854 62 GKDTLVFHCALSQVRGP 78 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~ 78 (132)
.+.+|+|+|..|..|+.
T Consensus 112 ~~~~vlVHC~aG~~RTg 128 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTG 128 (169)
T ss_dssp TTSEEEEECSSSSHHHH
T ss_pred CCCcEEEECCCCCChHH
Confidence 67899999998865544
No 94
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=73.52 E-value=11 Score=24.78 Aligned_cols=18 Identities=28% Similarity=0.510 Sum_probs=14.4
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.+|+|+|..|..|+.
T Consensus 101 ~~~~~VlVHC~aG~~RSg 118 (190)
T 2wgp_A 101 RKHGATLVHCAAGVSRSA 118 (190)
T ss_dssp HTTCCEEEECSSSSSHHH
T ss_pred hcCCCEEEECCCCCCHHH
Confidence 457899999999966655
No 95
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=73.37 E-value=5.2 Score=24.20 Aligned_cols=31 Identities=10% Similarity=0.243 Sum_probs=20.7
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~ 98 (132)
..|++.|.+|...|...+..+... +.+.|++
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~----~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKEL----CQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHH----HHHTTCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHH----HHHcCCe
Confidence 469999999975555455444444 4558885
No 96
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=73.07 E-value=10 Score=25.60 Aligned_cols=18 Identities=17% Similarity=0.320 Sum_probs=14.6
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.+|+|+|..|..|+.
T Consensus 81 ~~~~~VLVHC~aG~sRSg 98 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSP 98 (211)
T ss_dssp HTTCCEEEEESSSSSHHH
T ss_pred hcCCeEEEECCCCCCcHH
Confidence 467899999999976765
No 97
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=70.92 E-value=5.8 Score=26.34 Aligned_cols=44 Identities=16% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~ 111 (132)
...|+++|....-||+.+...+...+. ..|. ++.+...|...|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~----~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAE----REGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHH----HHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHH----hcCC-cEEEEeeecCCcC
Confidence 357999998666578777654444443 3663 6788888888774
No 98
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=70.38 E-value=19 Score=23.29 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..++....++.+++|||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 35 ~L~~ll~~~~~~~k~lVF~~~-----~~~~~~l~~~L~~----~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 35 FLLDLLNATGKDSLTLVFVET-----KKGADSLEDFLYH----EGY-ACTSIHGDRS 81 (185)
T ss_dssp HHHHHHHHC-CCSCEEEEESC-----HHHHHHHHHHHHH----TTC-CEEEEC----
T ss_pred HHHHHHHhcCCCCeEEEEECC-----HHHHHHHHHHHHH----cCC-ceEEEeCCCC
Confidence 344444444456789999964 2345566666655 787 7888888864
No 99
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=68.97 E-value=18 Score=22.37 Aligned_cols=76 Identities=11% Similarity=0.047 Sum_probs=37.0
Q ss_pred cccccHHHHHhhhC-CCCeEEEeeCCCCCcC---------CCccC-CccccCcc-chhHHHHHHHHHh--cCCCEEEEEc
Q 032854 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSY---------DGHIT-GSLHYPSD-SFTDKIFDLIQEV--RGKDTLVFHC 70 (132)
Q Consensus 5 ~~~is~~~~~~~~~-~~~~~liD~R~~~e~~---------~~hI~-gai~ip~~-~~~~~~~~~~~~~--~~~~~ivv~c 70 (132)
+...+.+++.+++. .+-..||+++...... .-|+| .-...|.. .+...+..+...+ ..+.+|+|+|
T Consensus 24 p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVHC 103 (159)
T 1rxd_A 24 PTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHC 103 (159)
T ss_dssp CCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTCEEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred CccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCCEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 45577788666555 3334688888753211 12222 00011111 1122222221111 3568999999
Q ss_pred CCCCCCcHHH
Q 032854 71 ALSQVRGPTC 80 (132)
Q Consensus 71 ~~g~~~~~~~ 80 (132)
..|..|+...
T Consensus 104 ~aG~~Rtg~~ 113 (159)
T 1rxd_A 104 VAGLGRAPVL 113 (159)
T ss_dssp SSSSTTHHHH
T ss_pred CCCCCHHHHH
Confidence 9986665433
No 100
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=68.02 E-value=14 Score=23.42 Aligned_cols=20 Identities=10% Similarity=0.235 Sum_probs=15.3
Q ss_pred cCCCEEEEEcCCCCCCcHHH
Q 032854 61 RGKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~ 80 (132)
..+.+|+|+|..|..|+...
T Consensus 85 ~~~~~VlVHC~~G~sRS~~v 104 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAI 104 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHH
T ss_pred hcCCeEEEEcCCCCcHHHHH
Confidence 45689999999997676433
No 101
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=66.13 E-value=8.7 Score=23.00 Aligned_cols=31 Identities=6% Similarity=0.098 Sum_probs=19.7
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~ 98 (132)
..|++.|.+|...+...+ ..|++.+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~----~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIK----MKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHH----HHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHH----HHHHHHHHHcCCC
Confidence 569999998854444444 3444445558885
No 102
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=65.85 E-value=5.8 Score=24.57 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=20.2
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCC
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI 97 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~ 97 (132)
.-..|+++|.+|...|...+..+.. .+.+.|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk----~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRK----KIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHH----HHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHH----HHHHCCC
Confidence 3457999999886444444444444 4455887
No 103
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=65.55 E-value=9.7 Score=22.71 Aligned_cols=30 Identities=17% Similarity=0.400 Sum_probs=21.0
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~ 98 (132)
-.|++.|.+|...+ ..+..+...+ .+.|++
T Consensus 5 mkIlvvC~~G~~TS-ll~~kl~~~~----~~~gi~ 34 (109)
T 2l2q_A 5 MNILLVCGAGMSTS-MLVQRIEKYA----KSKNIN 34 (109)
T ss_dssp EEEEEESSSSCSSC-HHHHHHHHHH----HHHTCS
T ss_pred eEEEEECCChHhHH-HHHHHHHHHH----HHCCCC
Confidence 35999999998667 6665555555 448874
No 104
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=65.02 E-value=22 Score=22.43 Aligned_cols=27 Identities=22% Similarity=0.161 Sum_probs=17.9
Q ss_pred ccccHHHHHhhhCCCCeEEEeeCCCCC
Q 032854 6 SYISGSQLLSLKRRPNIAVIDVRDDER 32 (132)
Q Consensus 6 ~~is~~~~~~~~~~~~~~liD~R~~~e 32 (132)
..++...+..+.+.+--++|+.|+..+
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e 52 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSS 52 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTS
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCccc
Confidence 346677776666655457888887654
No 105
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=63.66 E-value=10 Score=24.83 Aligned_cols=43 Identities=21% Similarity=0.484 Sum_probs=28.1
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc-cEEEeccchhhhh
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGWE 111 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~-~v~~l~gG~~~w~ 111 (132)
.|+++|....-||+.+...+...+ .+.|.. ++.+-..|..+|.
T Consensus 20 kVLFVCtGNiCRSpmAE~i~r~~~----~~~gl~~~~~v~SAGt~~~~ 63 (173)
T 4etm_A 20 SVLFVCLGNICRSPMAEAIFRDLA----AKKGLEGKIKADSAGIGGWH 63 (173)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHH----HHTTCTTTEEEEEEESSCTT
T ss_pred EEEEEeCCcchhhHHHHHHHHHHH----HHcCCCCceEEeccccccCC
Confidence 699999755446776654444433 346764 5778888887773
No 106
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=63.57 E-value=13 Score=22.21 Aligned_cols=30 Identities=3% Similarity=0.059 Sum_probs=20.2
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCc
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~ 98 (132)
..|++.|..|-..| ..+..+...+ ++.|++
T Consensus 4 kkIll~Cg~G~sTS-~l~~k~~~~~----~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTS-LLVSKMRAQA----EKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTH-HHHHHHHHHH----HHSCCS
T ss_pred cEEEEECCCchhHH-HHHHHHHHHH----HHCCCC
Confidence 36999999997555 5554555555 458874
No 107
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=63.33 E-value=9.6 Score=23.99 Aligned_cols=19 Identities=16% Similarity=0.114 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 83 ~~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred HcCCcEEEECCCCCchhHH
Confidence 4678999999999666653
No 108
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=61.60 E-value=11 Score=23.37 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.9
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 81 ~~~~~VlVHC~~G~~RSg~ 99 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSAT 99 (149)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred HcCCeEEEECCCCCCHHHH
Confidence 4678999999999666554
No 109
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=61.34 E-value=12 Score=24.47 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=34.7
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCC-cHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVR-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA 112 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~-~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~ 112 (132)
+-..+...++++..+|+.+..|..- |...|..+..+ ...|..++.++-||-.|...
T Consensus 63 Eg~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~-----~~~g~~~i~FvIGG~~Gl~~ 119 (163)
T 4fak_A 63 EGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQR-----MTQGQSDFVFVIGGSNGLHK 119 (163)
T ss_dssp HHHHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHH-----HHTTCCEEEEEECBTTBCCH
T ss_pred HHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHH-----HhcCCcceEEEEECCCccCH
Confidence 3445555567778888888766433 43444333332 33687899999999765533
No 110
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=61.27 E-value=11 Score=23.52 Aligned_cols=19 Identities=11% Similarity=0.122 Sum_probs=14.9
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 88 ~~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 88 QMGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred hcCCCEEEEcCCCCChHHH
Confidence 4678999999999666653
No 111
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=59.74 E-value=47 Score=24.11 Aligned_cols=68 Identities=7% Similarity=0.059 Sum_probs=36.3
Q ss_pred cHHHHHhhhC---CCCeEEEeeCCCCCcCCCccCCcc-c-------cCccc-hhHHHHHHHHHh--cCCCEEEEEcCCCC
Q 032854 9 SGSQLLSLKR---RPNIAVIDVRDDERSYDGHITGSL-H-------YPSDS-FTDKIFDLIQEV--RGKDTLVFHCALSQ 74 (132)
Q Consensus 9 s~~~~~~~~~---~~~~~liD~R~~~e~~~~hI~gai-~-------ip~~~-~~~~~~~~~~~~--~~~~~ivv~c~~g~ 74 (132)
..+++...++ ++.+.|+++++...|....+.+.+ + .|... +...+..+...+ .++.+|+|+|..|.
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~ 130 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGK 130 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEECSSSS
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4556666554 567899999876666544333322 1 23221 111112221111 34579999998775
Q ss_pred CC
Q 032854 75 VR 76 (132)
Q Consensus 75 ~~ 76 (132)
.|
T Consensus 131 gR 132 (339)
T 3v0d_A 131 GR 132 (339)
T ss_dssp HH
T ss_pred cc
Confidence 44
No 112
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=58.35 E-value=11 Score=24.71 Aligned_cols=43 Identities=14% Similarity=0.147 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w 110 (132)
.-.|+++|....-||+.+...+...+ +..| .++.+-..|...|
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~----~~~g-~~~~v~SAGt~~~ 76 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKS----KALG-KDWEAKSAGVFAP 76 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHH----HHTT-CCCEEEEEETTCC
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHH----HhcC-CceEEEEeeecCc
Confidence 45699999866556777664443333 3367 3677777787666
No 113
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=57.60 E-value=43 Score=23.08 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=20.6
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEE
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFV 102 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~ 102 (132)
.+|+|+|..|+ .+ ..+..++++|.. .|+ +|.+
T Consensus 59 ~~v~VlcG~GN-NG-GDGlv~AR~L~~----~G~-~V~v 90 (246)
T 1jzt_A 59 KHVFVIAGPGN-NG-GDGLVCARHLKL----FGY-NPVV 90 (246)
T ss_dssp CEEEEEECSSH-HH-HHHHHHHHHHHH----TTC-CEEE
T ss_pred CeEEEEECCCC-CH-HHHHHHHHHHHH----CCC-eEEE
Confidence 58999998875 32 233455566655 898 4543
No 114
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=56.98 E-value=30 Score=23.19 Aligned_cols=19 Identities=21% Similarity=0.613 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 137 ~~~~~VLVHC~aG~sRS~t 155 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSAT 155 (219)
T ss_dssp STTCCEEEECSSSSSHHHH
T ss_pred ccCCeEEEECCCCCCHHHH
Confidence 4678999999999766653
No 115
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=56.84 E-value=20 Score=26.15 Aligned_cols=68 Identities=7% Similarity=0.055 Sum_probs=33.5
Q ss_pred HHHHHhhhC-CCCeEEEeeCCCCCcCCCccC--C--ccccCccc----hhHHHHHHHHHh-cCCCEEEEEcCCCCCCcH
Q 032854 10 GSQLLSLKR-RPNIAVIDVRDDERSYDGHIT--G--SLHYPSDS----FTDKIFDLIQEV-RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 10 ~~~~~~~~~-~~~~~liD~R~~~e~~~~hI~--g--ai~ip~~~----~~~~~~~~~~~~-~~~~~ivv~c~~g~~~~~ 78 (132)
+++..+.+. .+=..|||+|... |....++ | -+++|..+ -.+.+..++... ..+.+|+|+|..|..|+.
T Consensus 207 ~~~~~~~L~~~GI~~VInL~~~~-y~~~~~~~~gi~~~~ipi~D~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gRTG 284 (348)
T 1ohe_A 207 PETYIQYFKNHNVTTIIRLNKRM-YDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTG 284 (348)
T ss_dssp THHHHHHHHHTTEEEEEECSCCS-SCTHHHHTTTCEEEECCCCTTCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCc-CChhhhhcCCcEEEEecCCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCChHH
Confidence 444444444 3334799999652 2221111 1 12233332 011223333332 467899999998865544
No 116
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=54.33 E-value=19 Score=22.24 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=13.7
Q ss_pred CCCEEEEEcCCCCCCcH
Q 032854 62 GKDTLVFHCALSQVRGP 78 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~ 78 (132)
.+.+|+|+|..|..|+.
T Consensus 84 ~~~~vlVHC~aG~~RSg 100 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSA 100 (151)
T ss_dssp TTCCEEEECSSSSHHHH
T ss_pred CCCcEEEECCCCCChHH
Confidence 57899999999965654
No 117
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=53.66 E-value=26 Score=22.19 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
...+++|||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 33 ~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQT-----RRNAKWLTVEMIQ----DGH-QVSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSC-----HHHHHHHHHHHHT----TTC-CEEEECSSCC
T ss_pred CCCCEEEEECC-----HHHHHHHHHHHHH----cCC-cEEEEeCCCC
Confidence 35689999974 2335556666654 787 7888888853
No 118
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=53.29 E-value=17 Score=23.33 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.9
Q ss_pred cCCCEEEEEcCCCCCCcHH
Q 032854 61 RGKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~ 79 (132)
..+.+|+|+|..|..|+..
T Consensus 85 ~~~~~VlVHC~aG~~RSg~ 103 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSAT 103 (177)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred hcCCcEEEEcCCCCCchHH
Confidence 4678999999999666654
No 119
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=53.09 E-value=54 Score=23.49 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=31.3
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..++.....+..++|||++ ...+..++..|.+ .|+ ++..+.|++.
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~-----~~~~~~l~~~L~~----~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVET-----KKGADSLEDFLYH----EGY-ACTSIHGDRS 311 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHHhcCCCCeEEEEECC-----HHHHHHHHHHHHH----CCC-CeeEecCCCC
Confidence 445555544567789999974 2345566666655 787 7888888864
No 120
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=51.61 E-value=29 Score=24.20 Aligned_cols=33 Identities=12% Similarity=0.312 Sum_probs=20.7
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
.+|+|+|..|+ .+ ..+..++++|.. .|++ |.++
T Consensus 86 ~~vlVlcG~GN-NG-GDGlv~AR~L~~----~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHV-KG-AQGISCGRHLAN----HDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSH-HH-HHHHHHHHHHHH----TTCE-EEEE
T ss_pred CeEEEEECCCC-CH-HHHHHHHHHHHH----CCCe-EEEE
Confidence 47999998875 32 233455566655 8984 4433
No 121
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=50.31 E-value=30 Score=21.61 Aligned_cols=45 Identities=18% Similarity=0.341 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 53 ~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
+..++... ...+++|||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 26 L~~ll~~~-~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 26 LKDVLMTE-NPDSCIIFCRT-----KEHVNQLTDELDD----LGY-PCDKIHGGMI 70 (163)
T ss_dssp HHHHHHHH-CCSSEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHhc-CCCcEEEEECC-----HHHHHHHHHHHHH----cCC-cEEEEeCCCC
Confidence 33444333 45578999964 2335556666655 787 7788888863
No 122
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=49.80 E-value=30 Score=24.74 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=20.7
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
.+|+|+|+.|+ .+ ..+..++++|.. .|+ +|.++
T Consensus 133 ~~vlVlcG~GN-NG-GDGlv~AR~L~~----~G~-~V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHV-KG-AQGISCGRHLAN----HDV-QVILF 165 (306)
T ss_dssp CEEEEEECSSH-HH-HHHHHHHHHHHH----TTC-EEEEE
T ss_pred CeEEEEECCCC-CH-HHHHHHHHHHHH----CCC-cEEEE
Confidence 58999998875 32 233445566655 898 45433
No 123
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=49.43 E-value=31 Score=24.21 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=21.0
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
.+|+|+|..|+ .+ ..+..++++|.. .|+ +|.++
T Consensus 80 ~~VlVlcG~GN-NG-GDGlv~AR~L~~----~G~-~V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGN-NG-GDGLVCARHLKL----FGY-QPTIY 112 (265)
T ss_dssp CEEEEEECSSH-HH-HHHHHHHHHHHH----TTC-EEEEE
T ss_pred CeEEEEECCCC-CH-HHHHHHHHHHHH----CCC-cEEEE
Confidence 58999998875 32 233455566655 898 45543
No 124
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=47.87 E-value=17 Score=23.79 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCC-cHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVR-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA 112 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~-~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~ 112 (132)
.-..+...++++..+|+.|..|..- |...| ..|.+ .+..|..++.++-||-.|+..
T Consensus 59 E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA----~~l~~-~~~~G~~~i~FvIGGa~Gl~~ 115 (167)
T 1to0_A 59 EGDRILSKISPDAHVIALAIEGKMKTSEELA----DTIDK-LATYGKSKVTFVIGGSLGLSD 115 (167)
T ss_dssp HHHHHHTTSCTTSEEEEEEEEEEECCHHHHH----HHHHH-HHTTTCCEEEEEECCSSCCCH
T ss_pred HHHHHHhhcCCCCEEEEEcCCCCcCCHHHHH----HHHHH-HHhcCCceEEEEEECCCCCCH
Confidence 3344444445566688888766433 33333 44432 234687789988898766543
No 125
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=46.03 E-value=25 Score=23.23 Aligned_cols=18 Identities=28% Similarity=0.593 Sum_probs=14.4
Q ss_pred CCCEEEEEcCCCCCCcHH
Q 032854 62 GKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~ 79 (132)
.+.+|+|+|..|..|+..
T Consensus 130 ~~~~VLVHC~aG~sRS~t 147 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSAT 147 (205)
T ss_dssp TTCCEEEECSSSSSHHHH
T ss_pred CCCeEEEECCCCCcHHHH
Confidence 578999999999766653
No 126
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=42.60 E-value=62 Score=24.88 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEE-Eeccc---------hhhhhhcCCCcc
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIF-VLERG---------FKGWEASGKPVC 118 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~-~l~gG---------~~~w~~~g~p~~ 118 (132)
...+|+|+|..|+ .+ .....++++|.. .||+ |. ++.+. +..|.+.|.++.
T Consensus 51 ~~~~v~VlcG~GN-NG-GDGlv~AR~L~~----~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGN-NG-GDGFVVARNLLG----VVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSH-HH-HHHHHHHHHHTT----TSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCC-CH-HHHHHHHHHHHH----CCCe-EEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 3678999998875 32 233345566644 8984 44 22221 346666676665
No 127
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=42.40 E-value=62 Score=25.93 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=34.9
Q ss_pred cCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccc
Q 032854 44 YPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERG 106 (132)
Q Consensus 44 ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG 106 (132)
++..++...+..+.+.+...+.|+||+.... .+..++..+...|+ .+|.+-.+++.+.
T Consensus 53 l~~~dm~~Av~~i~~aI~~~ekI~I~GH~D~-DGi~Saa~L~~~L~----~lG~~v~~~ip~r 110 (666)
T 2zxr_A 53 LPLKGLREAAALLEEALRQGKRIRVHGDYDA-DGLTGTAILVRGLA----ALGADVHPFIPHR 110 (666)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCEEEEECCSSH-HHHHHHHHHHHHHH----HTTCEEEECCC--
T ss_pred CcchhHHHHHHHHHHHHHcCCeEEEEeccCC-chHHHHHHHHHHHH----HcCCcEEEecCCC
Confidence 3345666666666666778899999998642 45555545555554 4897433344443
No 128
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=42.30 E-value=63 Score=20.37 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=28.4
Q ss_pred HHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 53 ~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
+..++... ...+++|||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 22 L~~ll~~~-~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKS-----VQRCIALAQLLVE----QNF-PAIAIHRGMP 66 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHhC-CCCcEEEEECC-----HHHHHHHHHHHHh----cCC-CEEEEECCCC
Confidence 34444433 45678999964 2345566666655 787 7778888864
No 129
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=42.07 E-value=1.2e+02 Score=23.68 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=26.8
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..+||||.+ ...+..++..|.+ .|+ .+..+.||+.
T Consensus 266 ~~~~~IVf~~s-----r~~~e~la~~L~~----~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFS-----QKDSEQVTVSLQN----LGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred cCCCeEEEeCc-----HHHHHHHHHHHHH----CCC-CEEEecCCCC
Confidence 56789999974 3345566676755 887 7888999873
No 130
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=41.98 E-value=61 Score=20.13 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..++... ...+++|||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 20 ~l~~ll~~~-~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 65 (165)
T 1fuk_A 20 CLTDLYDSI-SVTQAVIFCNT-----RRKVEELTTKLRN----DKF-TVSAIYSDLP 65 (165)
T ss_dssp HHHHHHHHT-TCSCEEEEESS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHHhC-CCCCEEEEECC-----HHHHHHHHHHHHH----cCC-CEEEEECCCC
Confidence 344444443 45678999964 2335556666654 787 7778888853
No 131
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=40.91 E-value=74 Score=20.83 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
...+++|||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 30 ~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRT-----KAETEEIAQGLLR----LGH-PAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSS-----HHHHHHHHHHHHH----HTC-CEEEECSSSC
T ss_pred CCCeEEEEeCC-----HHHHHHHHHHHHH----cCC-CEEEEECCCC
Confidence 45688999964 2335556666654 787 7778888853
No 132
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=39.18 E-value=29 Score=25.13 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=16.9
Q ss_pred HHHHHHhcCCCEEEEEcCCCCCCcH
Q 032854 54 FDLIQEVRGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 54 ~~~~~~~~~~~~ivv~c~~g~~~~~ 78 (132)
-.++..++.+.+|+++|..|..|+.
T Consensus 204 l~~v~~l~~~~~i~vHC~aG~GRTg 228 (314)
T 3mmj_A 204 LAFYRTLPQDAWLHFHSEAGVGRTT 228 (314)
T ss_dssp HHHHHTCCTTCEEEEECSSSSHHHH
T ss_pred HHHHHHcCCCCCEEEECCCCCchHH
Confidence 3444445667899999998864443
No 133
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=38.28 E-value=38 Score=23.20 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=35.0
Q ss_pred ccHHHHHhhhC---CCCeEEEeeCCCCC-cCCCccC--C--ccccCccch-----hHHHHHHHHHhc------CCCEEEE
Q 032854 8 ISGSQLLSLKR---RPNIAVIDVRDDER-SYDGHIT--G--SLHYPSDSF-----TDKIFDLIQEVR------GKDTLVF 68 (132)
Q Consensus 8 is~~~~~~~~~---~~~~~liD~R~~~e-~~~~hI~--g--ai~ip~~~~-----~~~~~~~~~~~~------~~~~ivv 68 (132)
.+++++.+.++ .+=..|||++.... |....+. | -+++|..+. .+.+..++..+. ++.+|+|
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~~~~~~VlV 146 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGV 146 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-----CEEEEE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45777766554 23357999997532 2221111 1 112332210 112222222221 2479999
Q ss_pred EcCCCCCCcH
Q 032854 69 HCALSQVRGP 78 (132)
Q Consensus 69 ~c~~g~~~~~ 78 (132)
+|..|..|+.
T Consensus 147 HC~aG~gRTG 156 (241)
T 2c46_A 147 HCTHGFNRTG 156 (241)
T ss_dssp ECSSSSHHHH
T ss_pred ECCCCCCHHH
Confidence 9998865544
No 134
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=34.25 E-value=1e+02 Score=22.50 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=41.1
Q ss_pred cHHHHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHH-HHHHHHHH
Q 032854 9 SGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPT-CAKRLANY 87 (132)
Q Consensus 9 s~~~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~-~a~~l~~~ 87 (132)
+..|+.++.+. +..|+|+|.+.+.- . .+.....++ + .+.++...++..-+.. .+..
T Consensus 116 ~~pel~~~A~~-g~~i~dvr~pp~~l--------~----~~~g~~~~v-----~-~k~i~v~GTD~~VGK~~ts~~---- 172 (349)
T 2obn_A 116 NIPDLNALLQP-GQLIWDVRKEPANL--------D----VASGAARTL-----P-CRRVLTVGTDMAIGKMSTSLE---- 172 (349)
T ss_dssp TCHHHHHHCCT-TCCEEETTCCCSSC--------C----CCCSGGGGC-----S-SEEEEEEESSSSSSHHHHHHH----
T ss_pred CCHHHHHHHHc-CCEEEEeccCcccc--------c----ccccceeee-----c-ceEEEEcCCCccccceeHHHH----
Confidence 34567776667 88999999754110 0 011111111 2 2334444444323332 3333
Q ss_pred HHHHhhhcCCccEEEeccchhhhhhc
Q 032854 88 LDEVKEDTGINSIFVLERGFKGWEAS 113 (132)
Q Consensus 88 L~~~~~~~G~~~v~~l~gG~~~w~~~ 113 (132)
|.+.+++.|+ ++.++.-|-.+|...
T Consensus 173 L~~~l~~~G~-~a~~~~tgqtg~~~~ 197 (349)
T 2obn_A 173 LHWAAKLRGW-RSKFLATGQTGVMLE 197 (349)
T ss_dssp HHHHHHHTTC-CEEEECCSHHHHHHH
T ss_pred HHHHHHhcCC-cEEEEeccchhhhhh
Confidence 3334556998 666666676766543
No 135
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=34.15 E-value=94 Score=20.02 Aligned_cols=36 Identities=11% Similarity=0.204 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
..+++|||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 54 ~~~~lVF~~~-----~~~~~~l~~~L~~----~g~-~~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEK-----KADVDAIHEYLLL----KGV-EAVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSC-----HHHHHHHHHHHHH----HTC-CEEEECTTSC
T ss_pred CCCEEEEECC-----HHHHHHHHHHHHH----cCC-cEEEEeCCCC
Confidence 4578999964 2345566666654 787 6778888853
No 136
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=32.95 E-value=67 Score=24.23 Aligned_cols=55 Identities=20% Similarity=0.091 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhc
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~ 113 (132)
.+.+.+...-+.-.-|+||++|. .+...|-+++.. ..|-++|-.++|+|.+|...
T Consensus 131 ~lae~l~~~~p~~~~v~f~~SGs-EA~e~AiklAr~------~tgr~~ii~~~~~yHG~t~~ 185 (454)
T 4ao9_A 131 RLARLICERFPQIEQLRFTNSGT-EANLMALTAALH------FTGRRKIVVFSGGYHGGVLG 185 (454)
T ss_dssp HHHHHHHHHSTTCSEEEEESSHH-HHHHHHHHHHHH------HHTCCEEEEETTCBCSTTCB
T ss_pred HHHHHHHHhCCCCCEEEEeCchH-HHHHHHHHHHHh------cccCCeEEEEeCCcCCcccc
Confidence 44444433333445678888763 444444333322 24777888999999987643
No 137
>1pp7_U 39 kDa initiator binding protein; core promoter, transcription initation, IBP39, T. vaginalis, transcription/DNA complex; 2.45A {Trichomonas vaginalis} SCOP: a.4.5.44 PDB: 1pp8_U
Probab=32.35 E-value=9.2 Score=23.76 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=24.9
Q ss_pred HhhhcCCccEEEeccchhhhhhcCCCccccCC
Q 032854 91 VKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (132)
Q Consensus 91 ~~~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (132)
.|+++||....-=.+|+..|..+|+.......
T Consensus 86 NLRdL~F~Q~q~dk~g~T~W~~~gFtk~S~~~ 117 (131)
T 1pp7_U 86 NLRDLAFEQLQHDKGGWTQWKRSGFTRNSVFE 117 (131)
T ss_dssp HHHHTTCEEEEEEETTEEEEECTTEETTEECC
T ss_pred cchhccceeeccccCceeEEecCCcccccccc
Confidence 46779998888777999999999876654443
No 138
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=31.72 E-value=87 Score=22.62 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEecc
Q 032854 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLER 105 (132)
Q Consensus 53 ~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~g 105 (132)
..++.+.++..+-++|.|.-|+-.+..++..++..+++ .|+.-|.+..+
T Consensus 71 ~~eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiake----~GalvVavVt~ 119 (315)
T 3r4v_A 71 IPALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLAD----RKASFVSFVVG 119 (315)
T ss_dssp HHHHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHHH----TTCCEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEeccCCccccchHHHHHHHHHH----cCCCEEEEEec
Confidence 34445555665666666765655788888777776655 99876666555
No 139
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=31.45 E-value=40 Score=23.78 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=14.0
Q ss_pred CCCEEEEEcCCCCCCcHH
Q 032854 62 GKDTLVFHCALSQVRGPT 79 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~ 79 (132)
.+.+|+|+|..|..|+..
T Consensus 105 ~g~~VLVHC~aG~sRS~t 122 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPA 122 (294)
T ss_dssp HCSEEEEECSSSSSHHHH
T ss_pred CCCEEEEECCCCCchhHH
Confidence 467899999999766543
No 140
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=30.92 E-value=11 Score=23.66 Aligned_cols=39 Identities=18% Similarity=0.493 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w 110 (132)
..|+++|....-||+.+...+...+ + +++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~-------~-~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMV-------G-DKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHH-------S-SCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-------C-CCEEEEeeecCCc
Confidence 4699999877667887764444322 2 2355666677666
No 141
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=30.83 E-value=66 Score=19.71 Aligned_cols=23 Identities=13% Similarity=0.221 Sum_probs=13.4
Q ss_pred HHHHHhhhCCCCeEEEeeCCCCC
Q 032854 10 GSQLLSLKRRPNIAVIDVRDDER 32 (132)
Q Consensus 10 ~~~~~~~~~~~~~~liD~R~~~e 32 (132)
.+++..+...+=..|||+|+..+
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e 40 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWE 40 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHH
T ss_pred HHHHHHHHHCCCCEEEEcCchhh
Confidence 34444443333347999998744
No 142
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=30.06 E-value=87 Score=18.72 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=20.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEE
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFV 102 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~ 102 (132)
-.|.-|.+|...+..++ +.|++..+++|+ .+.+
T Consensus 6 vaVTaCptGiAhTymAa----eaL~~aA~~~G~-~ikV 38 (106)
T 2r4q_A 6 LAVTACPTGIAHTFMAA----DALKEKAKELGV-EIKV 38 (106)
T ss_dssp EEEEECSCC--CHHHHH----HHHHHHHHHHTC-CEEE
T ss_pred EEEecCCCcHHHHHHHH----HHHHHHHHHCCC-eEEE
Confidence 35677888875565665 555556667998 5554
No 143
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=29.52 E-value=53 Score=20.21 Aligned_cols=38 Identities=16% Similarity=0.258 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~ 109 (132)
+.|+++|....-||+.+...+. .+ .+ .++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~-~~------~~-~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAK-QY------LG-DEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHH-HH------SC-TTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHH-Hh------CC-CCEEEEcCcCCC
Confidence 3699999866666776653222 22 34 367777777654
No 144
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=29.15 E-value=61 Score=21.00 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=45.8
Q ss_pred HHHHhhhCC-CCeEEEeeCCCCCcCCCccCCccccCccc-hhHHHHHHHHHhcCCCEEEEEcCCCCCC-cHHHHHHHHHH
Q 032854 11 SQLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQEVRGKDTLVFHCALSQVR-GPTCAKRLANY 87 (132)
Q Consensus 11 ~~~~~~~~~-~~~~liD~R~~~e~~~~hI~gai~ip~~~-~~~~~~~~~~~~~~~~~ivv~c~~g~~~-~~~~a~~l~~~ 87 (132)
+++.+.+.. -+.-++.+.+... .+... ...+-..+...++++..+|+.|..|..- |...|..+..+
T Consensus 22 ~eY~kRl~~~~~lei~ev~~~k~-----------~~~~~~~~~E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~ 90 (163)
T 1o6d_A 22 KHYEKFLRRFCKPEVLEIKRVHR-----------GSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDL 90 (163)
T ss_dssp HHHHHHHTTTCEEEEEEECCCCC-----------SCHHHHHHHHHHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHcCccCCceEEEecCccc-----------ccHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 344444443 2456777766544 11111 1223444444455555678888766432 44444333332
Q ss_pred HHHHhhhcCCccEEEeccchhhhhhc
Q 032854 88 LDEVKEDTGINSIFVLERGFKGWEAS 113 (132)
Q Consensus 88 L~~~~~~~G~~~v~~l~gG~~~w~~~ 113 (132)
+..| .++.++-||-.++..+
T Consensus 91 -----~~~G-~~i~FvIGGa~Gl~~~ 110 (163)
T 1o6d_A 91 -----EMKG-KDITILIGGPYGLNEE 110 (163)
T ss_dssp -----HHHT-CCEEEEECCTTCCCGG
T ss_pred -----HhcC-CeEEEEEECCCCCCHH
Confidence 3358 7899888997776543
No 145
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=28.07 E-value=1.6e+02 Score=20.71 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..++.... ..+++|||++ ...+..++..|.. .|+ .+..|.|++.
T Consensus 18 ~L~~ll~~~~-~~~~LVF~~t-----~~~~~~l~~~L~~----~g~-~~~~lhg~l~ 63 (300)
T 3i32_A 18 VLSDLLYVAS-PDRAMVFTRT-----KAETEEIAQGLLR----LGH-PAQALHGDMS 63 (300)
T ss_dssp HHHHHHHHHC-CSSEEEECSS-----HHHHHHHHHHHHT----TTC-CEEEECSCCC
T ss_pred HHHHHHHhcC-CCCEEEEECC-----HHHHHHHHHHHHh----CCC-CEEEEeCCCC
Confidence 3444444333 6788999974 2335555666644 787 7788888853
No 146
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=27.94 E-value=1.8e+02 Score=21.30 Aligned_cols=65 Identities=9% Similarity=0.186 Sum_probs=33.7
Q ss_pred HHHHhhhC---CCCeEEEeeCCCCCcCCCccCCcc-ccCccc-----h---hH---HHHHHHHHhcCCCEEEEEcCCCCC
Q 032854 11 SQLLSLKR---RPNIAVIDVRDDERSYDGHITGSL-HYPSDS-----F---TD---KIFDLIQEVRGKDTLVFHCALSQV 75 (132)
Q Consensus 11 ~~~~~~~~---~~~~~liD~R~~~e~~~~hI~gai-~ip~~~-----~---~~---~~~~~~~~~~~~~~ivv~c~~g~~ 75 (132)
+++...++ ++.+.|++++. ..|......+.+ ++|..+ + .. .+..++.. .++.+++|+|..|..
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD~~~P~l~~l~~~~~~i~~~l~~-~~~~~v~VHC~aG~G 127 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQ-NPKNVCVVHCLDGRA 127 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGGEEECCCCSSSCCCHHHHHHHHHHHHHHHHH-CTTCEEEEEECSCTH
T ss_pred HHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCcEEEeecCCCCCCCHHHHHHHHHHHHHHHhc-CCCCeEEEEeCCCCc
Confidence 34555444 56799999964 456543333322 222211 1 11 22222221 456789999988754
Q ss_pred Cc
Q 032854 76 RG 77 (132)
Q Consensus 76 ~~ 77 (132)
|+
T Consensus 128 Rt 129 (361)
T 3n0a_A 128 AS 129 (361)
T ss_dssp HH
T ss_pred cH
Confidence 43
No 147
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=27.34 E-value=1.8e+02 Score=22.02 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+.+++|||++ ...+..++..|.+ .|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~s-----r~~~e~l~~~L~~----~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNS-----RAKVEDTAARLQS----KGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred CCCcEEEEeCC-----HHHHHHHHHHHHH----CCC-CEEEecCCCC
Confidence 45678999974 2335566666655 887 7888889874
No 148
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=27.23 E-value=58 Score=19.69 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=20.7
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 66 LVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 66 ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
.|.-|.+|...+..+ ++.|++..+++|+ .+.+=
T Consensus 10 aVTaCptGiAHTyMA----AeaL~~aA~~~G~-~ikVE 42 (111)
T 2kyr_A 10 ALCACPMGLAHTFMA----AQALEEAAVEAGY-EVKIE 42 (111)
T ss_dssp EEEEESSCHHHHHHH----HHHHHHHHHHTSS-EEEEE
T ss_pred EEEcCCCcHHHHHHH----HHHHHHHHHHCCC-eEEEE
Confidence 347788775334444 4666666778998 56653
No 149
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=27.08 E-value=74 Score=18.91 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=21.4
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
+...|++.|..|.+ +... +..+++..++.|+ ++.+.
T Consensus 5 ~~mkIlL~C~aGmS-Tsll----v~km~~~a~~~gi-~v~i~ 40 (108)
T 3nbm_A 5 KELKVLVLCAGSGT-SAQL----ANAINEGANLTEV-RVIAN 40 (108)
T ss_dssp CCEEEEEEESSSSH-HHHH----HHHHHHHHHHHTC-SEEEE
T ss_pred cCceEEEECCCCCC-HHHH----HHHHHHHHHHCCC-ceEEE
Confidence 45579999998863 3223 3445555555787 44443
No 150
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=26.81 E-value=55 Score=22.83 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=13.5
Q ss_pred hcCCCEEEEEcCCCCCCc
Q 032854 60 VRGKDTLVFHCALSQVRG 77 (132)
Q Consensus 60 ~~~~~~ivv~c~~g~~~~ 77 (132)
.....||||+|..|..|+
T Consensus 203 ~~~~~PivVHCsaGvGRT 220 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRT 220 (288)
T ss_dssp STTCCCEEEECSSSSHHH
T ss_pred cCCCCcEEEEeCCCCcHH
Confidence 345789999999886454
No 151
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=26.69 E-value=59 Score=21.43 Aligned_cols=48 Identities=17% Similarity=0.127 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhhhcCCCccc
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (132)
..+++++|...|. ++.++..|++ .||+-+-+++.....+.-.|+|+-.
T Consensus 11 ~~k~v~IiGAGg~------g~~v~~~l~~----~~~~~vgfiDd~~~~~~~~g~~Vlg 58 (220)
T 4ea9_A 11 AIGGVVIIGGGGH------AKVVIESLRA----CGETVAAIVDADPTRRAVLGVPVVG 58 (220)
T ss_dssp CSSCEEEECCSHH------HHHHHHHHHH----TTCCEEEEECSCC---CBTTBCEEE
T ss_pred CCCCEEEEcCCHH------HHHHHHHHHh----CCCEEEEEEeCCcccCcCCCeeEEC
Confidence 3457899887542 3444455543 7887777888765444335666643
No 152
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=26.52 E-value=1.1e+02 Score=21.26 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=13.3
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
....||||+|..|..|+-
T Consensus 202 ~~~~pivVHCsaGvGRTG 219 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTG 219 (284)
T ss_dssp TTCCCEEEESSBSSHHHH
T ss_pred CCCCcEEEEcCCCCcHHH
Confidence 356899999998865543
No 153
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=26.37 E-value=67 Score=19.66 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=21.4
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.|+++|....-||+.+...+. .+ .+ +++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~-~~------~~-~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAK-TL------GA-GKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHH-HH------SB-TTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHH-HH------cC-CCEEEEcccCC
Confidence 689999866656766653222 22 22 35667766655
No 154
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=26.19 E-value=63 Score=19.96 Aligned_cols=55 Identities=7% Similarity=0.165 Sum_probs=27.4
Q ss_pred HHHHHHHhc-CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhh
Q 032854 53 IFDLIQEVR-GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (132)
Q Consensus 53 ~~~~~~~~~-~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~ 111 (132)
+..++..+. ....++.+|.+|++..-.+... +++.+...++..-..+++.+..|.
T Consensus 95 ~~~fl~~~~~~~~k~~~~~t~gg~~~g~~~~~----l~~~~~~~~~~~g~~~~~~~~~w~ 150 (151)
T 3edo_A 95 IKTLLDQMKNYRGEVASFFTSAGTNHKAYVSH----FNEWADGLNVIGVARDDSEVDKWS 150 (151)
T ss_dssp HHHHHHHTTTCCSEEEEEEECSSCCHHHHHHH----HHHHTTTSEEEEEEETTTTHHHHH
T ss_pred HHHHHHhchhcCCEEEEEEEeCCCCCCcHHHH----HHHHcCCCeeecccccHHHHHHHh
Confidence 444444432 2345666666665442333333 333344466555555666677774
No 155
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=26.10 E-value=1.2e+02 Score=19.44 Aligned_cols=87 Identities=13% Similarity=0.152 Sum_probs=45.2
Q ss_pred HHHHhhhCC-CCeEEEeeCCCCCcCCCccCCccccCccch-hHHHHHHHHHhcCCCEEEEEcCCCCCC-cHHHHHHHHHH
Q 032854 11 SQLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDSF-TDKIFDLIQEVRGKDTLVFHCALSQVR-GPTCAKRLANY 87 (132)
Q Consensus 11 ~~~~~~~~~-~~~~liD~R~~~e~~~~hI~gai~ip~~~~-~~~~~~~~~~~~~~~~ivv~c~~g~~~-~~~~a~~l~~~ 87 (132)
+++.+.+.. -+.-++.+.+...-. +.+.... ..+-..+...++++ .+|+.+..|..- |...|..+..+
T Consensus 21 ~eY~kRl~~~~~~e~~ev~~~~~~~--------~~~~~~~~~~E~~~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~ 91 (155)
T 1ns5_A 21 TEYLRRFPKDMPFELIEIPAGKRGK--------NADIKRILDKEGEQMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERW 91 (155)
T ss_dssp HHHHTTSCTTSCEEEEEECCCCCCT--------TCCHHHHHHHHHHHHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHcCccCCceEEEecCCcCcc--------cccHHHHHHHHHHHHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHH
Confidence 344444442 256677776654422 1121211 22344444555554 677778666432 44444443332
Q ss_pred HHHHhhhcCCccEEEeccchhhhhh
Q 032854 88 LDEVKEDTGINSIFVLERGFKGWEA 112 (132)
Q Consensus 88 L~~~~~~~G~~~v~~l~gG~~~w~~ 112 (132)
+..| .++..+-||-.++..
T Consensus 92 -----~~~g-~~i~FvIGG~~Gl~~ 110 (155)
T 1ns5_A 92 -----KLDG-RDVSLLIGGPEGLSP 110 (155)
T ss_dssp -----HHHC-SCEEEEECBTTBCCH
T ss_pred -----HhcC-CeEEEEEECCCCCCH
Confidence 3358 789988899776643
No 156
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=25.89 E-value=95 Score=17.46 Aligned_cols=54 Identities=11% Similarity=0.185 Sum_probs=30.3
Q ss_pred cCccchhHHHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEec
Q 032854 44 YPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (132)
Q Consensus 44 ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~ 104 (132)
++...+...+..+... .++.+|+|.....- .....-.+...| +..|+.+|.+..
T Consensus 39 v~~~~L~~~l~~~~~~-~~~~~V~I~aD~~~--~y~~vv~vmd~l----~~aG~~~v~l~t 92 (99)
T 2pfu_A 39 VTDETMITALNALTEG-KKDTTIFFRADKTV--DYETLMKVMDTL----HQAGYLKIGLVG 92 (99)
T ss_dssp ECSSSHHHHHHHHSSS-CCSSCEEEEECTTC--CHHHHHHHHHHH----HHTCCCCEECTT
T ss_pred cCHHHHHHHHHHHHhc-CCCceEEEEcCCCC--CHHHHHHHHHHH----HHcCCCeEEEEe
Confidence 4455565555554321 34567888887553 232222333334 559999997654
No 157
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.74 E-value=1.2e+02 Score=18.47 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=24.0
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhhhh
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~w~ 111 (132)
+++-.|+++... ......+...| .+.||..|.....|..++.
T Consensus 10 ~k~~rILiVDD~-----~~~r~~l~~~L----~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDF-----STMRRIVKNLL----RDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSC-----HHHHHHHHHHH----HHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCC-----HHHHHHHHHHH----HHcCCcEEEEECCHHHHHH
Confidence 344457776642 23333444444 4488877777777776653
No 158
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=25.61 E-value=61 Score=22.70 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=13.3
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
..+.||||+|..|..|+-
T Consensus 207 ~~~~PivVHCsaGvGRTG 224 (287)
T 2b49_A 207 VDSEPVLVHCSAGIGRTG 224 (287)
T ss_dssp CTTCCEEEECSSSSHHHH
T ss_pred cCCCcEEEEcCCCCcHHH
Confidence 346899999998865543
No 159
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=25.10 E-value=65 Score=19.26 Aligned_cols=35 Identities=26% Similarity=0.224 Sum_probs=21.1
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccc
Q 032854 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERG 106 (132)
Q Consensus 67 vv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG 106 (132)
|.-|.+|...+..++ ..|++..++.|+ ++.+=.-|
T Consensus 8 VtaCptGiAhTymAA----eaLekaA~~~G~-~ikVEtqg 42 (106)
T 2m1z_A 8 VTACATGVAHTYMAA----QALKKGAKKMGN-LIKVETQG 42 (106)
T ss_dssp EEECSSCHHHHHHHH----HHHHHHHHHHTC-EEEEEEEE
T ss_pred EEECCCcHHHHHHHH----HHHHHHHHHCCC-EEEEEEec
Confidence 444888754344444 566666677998 66655444
No 160
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=24.82 E-value=88 Score=19.02 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchhh
Q 032854 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (132)
Q Consensus 64 ~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~~ 109 (132)
..|+++|....-||+.+...+. .+ .| .++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~-~~------~~-~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGK-EI------LG-EGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHH-HH------ST-TTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHH-Hh------cC-CCEEEEcCcCCC
Confidence 3699999866666776653322 22 33 466677777653
No 161
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=24.64 E-value=1.4e+02 Score=19.12 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=31.2
Q ss_pred HHHhhhCCCCeEEEeeCCCCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCC
Q 032854 12 QLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (132)
Q Consensus 12 ~~~~~~~~~~~~liD~R~~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~ 74 (132)
++++.+...+..++|+-+..+ . ..+.+++...+...+.. ...+.-|++|.+|.
T Consensus 29 ~i~~~L~~~G~eV~D~G~~~~-------~--~~dYpd~a~~va~~V~~-g~~d~GIliCGTGi 81 (155)
T 1o1x_A 29 KVKNYLLGKGIEVEDHGTYSE-------E--SVDYPDYAKKVVQSILS-NEADFGILLCGTGL 81 (155)
T ss_dssp HHHHHHHHTTCEEEECCCCSS-------S--CCCHHHHHHHHHHHHHT-TSCSEEEEEESSSH
T ss_pred HHHHHHHHCCCEEEEeCCCCC-------C--CCChHHHHHHHHHHHHc-CCCceEEEEcCCcH
Confidence 455555555789999976332 1 23444455555555433 23467889999884
No 162
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.51 E-value=1.4e+02 Score=18.85 Aligned_cols=38 Identities=24% Similarity=0.199 Sum_probs=20.0
Q ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccch
Q 032854 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF 107 (132)
Q Consensus 65 ~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~ 107 (132)
.+|..|.... ........+...|+ +.|..++.++-||.
T Consensus 71 diV~lS~~~~-~~~~~~~~~i~~L~----~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 71 DVIGVSILNG-AHLHLMKRLMAKLR----ELGADDIPVVLGGT 108 (161)
T ss_dssp SEEEEEESSS-CHHHHHHHHHHHHH----HTTCTTSCEEEEEC
T ss_pred CEEEEEeech-hhHHHHHHHHHHHH----hcCCCCCEEEEeCC
Confidence 3444443321 23334444444454 47876688887883
No 163
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=24.39 E-value=1.3e+02 Score=19.68 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEec
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~ 104 (132)
..+|++.|-.|. ........++..|+. .|| +|.+|.
T Consensus 88 ~~~vll~~~~gd-~H~iG~~~va~~l~~----~G~-~v~~LG 123 (210)
T 1y80_A 88 VGKIVLGTVKGD-LHDIGKNLVAMMLES----GGF-TVYNLG 123 (210)
T ss_dssp CCEEEEEEBTTC-CCCHHHHHHHHHHHH----TTC-EEEECC
T ss_pred CCEEEEEeCCCc-ccHHHHHHHHHHHHH----CCC-EEEECC
Confidence 457899897776 334455566666655 998 666663
No 164
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=24.23 E-value=67 Score=22.52 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=12.9
Q ss_pred cCCCEEEEEcCCCCCCc
Q 032854 61 RGKDTLVFHCALSQVRG 77 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~ 77 (132)
....||||+|..|..|+
T Consensus 216 ~~~~PivVHCsaGvGRT 232 (291)
T 2hc1_A 216 PGAGPTVVHCSAGVGRT 232 (291)
T ss_dssp SCCCCEEEECSSSSHHH
T ss_pred CCCCCEEEEeCCCCchh
Confidence 45679999999886453
No 165
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=24.07 E-value=1.7e+02 Score=20.72 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=13.5
Q ss_pred cCCCEEEEEcCCCCCCcH
Q 032854 61 RGKDTLVFHCALSQVRGP 78 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~ 78 (132)
....||||+|..|..|+-
T Consensus 237 ~~~~PivVHCsaGvGRTG 254 (316)
T 3b7o_A 237 MDAGPVVVHCSAGIGRTG 254 (316)
T ss_dssp TTCCCEEEEESSSSHHHH
T ss_pred CCCCCEEEEcCCCCcHHH
Confidence 457899999998865543
No 166
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=24.01 E-value=87 Score=18.72 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=20.0
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEE
Q 032854 66 LVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFV 102 (132)
Q Consensus 66 ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~ 102 (132)
.|.-|.+|...+..+ ++.|++..+++|+ .+.+
T Consensus 7 aVTaCptGiAhTymA----aeaL~~aA~~~G~-~ikV 38 (106)
T 2r48_A 7 AITSCPNGIAHTYMA----AENLQKAADRLGV-SIKV 38 (106)
T ss_dssp EEEECSSCSHHHHHH----HHHHHHHHHHHTC-EEEE
T ss_pred EEecCCCcHHHHHHH----HHHHHHHHHHCCC-eEEE
Confidence 456677776444444 4666666677998 5554
No 167
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=23.97 E-value=76 Score=19.98 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=21.6
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
-..|+++|....-||+.+...+. .+ .+ +++.+...|..
T Consensus 20 ~~~VLFVC~gN~cRSpmAEal~~-~~------~~-~~~~v~SAGt~ 57 (148)
T 3rh0_A 20 MKSVLFVCVGNGGKSQMAAALAQ-KY------AS-DSVEIHSAGTK 57 (148)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHH-HH------CC-TTSEEEEEESS
T ss_pred CCEEEEECCCchhHHHHHHHHHH-Hh------cC-CCEEEEecccC
Confidence 35799999866556776653222 22 22 35555555543
No 168
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=23.88 E-value=1.3e+02 Score=18.33 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHhhhcCCccEEEeccch
Q 032854 81 AKRLANYLDEVKEDTGINSIFVLERGF 107 (132)
Q Consensus 81 a~~l~~~L~~~~~~~G~~~v~~l~gG~ 107 (132)
...+...|+ +.|..++.++-||.
T Consensus 71 ~~~~i~~l~----~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 71 CKGLRQKCD----EAGLEGILLYVGGN 93 (137)
T ss_dssp HTTHHHHHH----HTTCTTCEEEEEES
T ss_pred HHHHHHHHH----hcCCCCCEEEEECC
Confidence 334444444 47876788888884
No 169
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=23.77 E-value=2.3e+02 Score=21.25 Aligned_cols=41 Identities=7% Similarity=0.077 Sum_probs=25.6
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.....++|||.+ ...+..++..|.+. ...|+ .+..+.|++.
T Consensus 337 ~~~~~~iVF~~s-----~~~~~~l~~~L~~~-~~~~~-~v~~~h~~~~ 377 (563)
T 3i5x_A 337 DSNYKAIIFAPT-----VKFTSFLCSILKNE-FKKDL-PILEFHGKIT 377 (563)
T ss_dssp TTCCEEEEECSC-----HHHHHHHHHHHHHH-HTTTS-CEEEESTTSC
T ss_pred CCCCcEEEEcCc-----HHHHHHHHHHHHHh-ccCCc-eEEEecCCCC
Confidence 467789999974 23455566666541 01265 7778888863
No 170
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=23.47 E-value=91 Score=18.84 Aligned_cols=19 Identities=21% Similarity=0.130 Sum_probs=12.6
Q ss_pred hcCCCEEEEEcCCCCCCcHHH
Q 032854 60 VRGKDTLVFHCALSQVRGPTC 80 (132)
Q Consensus 60 ~~~~~~ivv~c~~g~~~~~~~ 80 (132)
+..+..|+|-|... +++..
T Consensus 72 i~~~G~ivv~~q~~--RSQ~~ 90 (112)
T 1j26_A 72 INKAGELVLTSESS--RYQFR 90 (112)
T ss_dssp BCSSSEEEEEECCC--SSHHH
T ss_pred cccCCeEEEEECCc--cCHHH
Confidence 35566799999864 55543
No 171
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=23.41 E-value=70 Score=20.34 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=26.9
Q ss_pred ccccHHHHHhhhCC-CCeEEEe----------------eCCCCCcCCCccCCccccCccchhH
Q 032854 6 SYISGSQLLSLKRR-PNIAVID----------------VRDDERSYDGHITGSLHYPSDSFTD 51 (132)
Q Consensus 6 ~~is~~~~~~~~~~-~~~~liD----------------~R~~~e~~~~hI~gai~ip~~~~~~ 51 (132)
..++.+++.+++-. ....+|| +...+.|-.||.||--.+|..-+-+
T Consensus 11 ~~~di~~I~~~lPhR~PfLlvDrv~~~~~~~~i~a~k~Vt~~e~ff~gHFp~~PvmPGvL~iE 73 (160)
T 4h4g_A 11 INFDIHKILTLLPHRYPILLVDRVLELEPHKSIKALKNVTVNEPFFTGHFPKRPVMPGVLIIE 73 (160)
T ss_dssp --CCHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECCTTSGGGGTSCTTSCCCCHHHHHH
T ss_pred cccCHHHHHHHCCCCCCeEEEEEEEEecCCCEEEEEEEeccCcccccCCCCCCCcCcHHHHHH
Confidence 34778888887762 2222333 3445566778888877777544333
No 172
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=23.07 E-value=1.2e+02 Score=21.21 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
...++++||++ ...+..++..|++ .|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~-----~~~~~~l~~~l~~----~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVAT-----KKTANVLYGKLKS----EGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSC-----HHHHHHHHHHHHH----TTC-CCEEECTTSC
T ss_pred cCCCEEEEeCC-----HHHHHHHHHHHHh----cCC-cEEEeCCCCC
Confidence 45789999964 3345566666655 787 7888888853
No 173
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=22.99 E-value=2e+02 Score=21.23 Aligned_cols=16 Identities=13% Similarity=0.235 Sum_probs=12.8
Q ss_pred hhcCCccEEEeccchh
Q 032854 93 EDTGINSIFVLERGFK 108 (132)
Q Consensus 93 ~~~G~~~v~~l~gG~~ 108 (132)
++.+.+-+.++.|||.
T Consensus 284 ~~~~~p~v~v~eGGY~ 299 (376)
T 4a69_A 284 KSFNIPLLVLGGGGYT 299 (376)
T ss_dssp HTTCCCEEEECCCCCS
T ss_pred HHcCCCEEEEECCCCC
Confidence 4478778889999986
No 174
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=22.88 E-value=1.9e+02 Score=19.86 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=25.9
Q ss_pred ccCCccccCccchhHHHHHHHHHhc--CCCEEEEEcCCCC
Q 032854 37 HITGSLHYPSDSFTDKIFDLIQEVR--GKDTLVFHCALSQ 74 (132)
Q Consensus 37 hI~gai~ip~~~~~~~~~~~~~~~~--~~~~ivv~c~~g~ 74 (132)
+.||+++++...+...+..+...+. .-+.||++-..|+
T Consensus 83 ~fPGTisl~~~tl~~~l~di~~sl~~~GfrrivivNgHGG 122 (260)
T 1v7z_A 83 HFPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYE 122 (260)
T ss_dssp TSSSCBCBCHHHHHHHHHHHHHHHHHHTCCEEEEEECSGG
T ss_pred CCCceEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 5799999998888776666655542 3466776665553
No 175
>3qyf_A Crispr-associated protein; helix-turn-helix, antiviral protein, viral resistance, nucle binding domain; 1.90A {Sulfolobus solfataricus}
Probab=22.19 E-value=1.5e+02 Score=21.46 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=22.4
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 66 LVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 66 ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
-+++|.+|+..+..+...++.++ .|.+.++++...+.
T Consensus 161 ~v~~N~TGGfKaei~yl~l~g~l------~Ga~~v~Yi~E~~~ 197 (324)
T 3qyf_A 161 EVYINATPGLKPESIFLTLAGLL------AGADLIYYKYQEFN 197 (324)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHH------TTCCEEEEEETTTT
T ss_pred eEEEEcCCCcchHHHHHHHHHHH------cCCCeEEEEEcCCC
Confidence 46678888877665544444444 68875665544433
No 176
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.14 E-value=1.7e+02 Score=19.94 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEe
Q 032854 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (132)
Q Consensus 63 ~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l 103 (132)
..+|++.|-.|. ........++..|+. .|| +|.+|
T Consensus 123 ~~~vlla~~~gd-~HdiG~~iva~~L~~----~G~-~Vi~L 157 (258)
T 2i2x_B 123 KGTVVCHVAEGD-VHDIGKNIVTALLRA----NGY-NVVDL 157 (258)
T ss_dssp SCEEEEEECTTC-CCCHHHHHHHHHHHH----TTC-EEEEE
T ss_pred CCeEEEEeCCCC-ccHHHHHHHHHHHHH----CCC-EEEEC
Confidence 457999998775 334555566666655 999 66555
No 177
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=22.07 E-value=1.4e+02 Score=21.17 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
....+++||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 257 ~~~~~lVf~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNS-----TNRVELLAKKITD----LGY-SCYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSS-----HHHHHHHHHHHHH----HTC-CEEEECTTSC
T ss_pred CCCcEEEEEec-----HHHHHHHHHHHHh----cCC-CeEEecCCCC
Confidence 45689999974 2335556666654 787 7778888864
No 178
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=22.07 E-value=2.2e+02 Score=20.30 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=24.1
Q ss_pred cCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEecc
Q 032854 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLER 105 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~g 105 (132)
..+..++|||++ ...+..+...|.. .|+ ++..+.|
T Consensus 359 ~~~~k~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNY-----RETAKKIVNELVK----DGI-KAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSC-----HHHHHHHHHHHHH----TTC-CEEEECC
T ss_pred CCCCeEEEEEcc-----HHHHHHHHHHHHH----cCC-CcEEEec
Confidence 457789999964 3345566666655 787 6778888
No 179
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=22.03 E-value=2.1e+02 Score=20.02 Aligned_cols=46 Identities=24% Similarity=0.365 Sum_probs=29.0
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 52 ~~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
.+..++... ...+++|||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 240 ~l~~~l~~~-~~~~~lvf~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 285 (391)
T 1xti_A 240 KLFDLLDVL-EFNQVVIFVKS-----VQRCIALAQLLVE----QNF-PAIAIHRGMP 285 (391)
T ss_dssp HHHHHHHHS-CCSEEEEECSC-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHHhc-CCCcEEEEeCc-----HHHHHHHHHHHHh----CCC-cEEEEeCCCC
Confidence 344444433 56789999964 3345556666655 787 6778888753
No 180
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=21.80 E-value=2.2e+02 Score=20.16 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=12.3
Q ss_pred CCCEEEEEcCCCCCCc
Q 032854 62 GKDTLVFHCALSQVRG 77 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~ 77 (132)
++.+|+|+|..|..|+
T Consensus 110 ~~~~VlVHC~aG~gRT 125 (324)
T 1d5r_A 110 DNHVAAIHCKAGKGRT 125 (324)
T ss_dssp SCSEEEEECSSSSHHH
T ss_pred CCCeEEEECCCCCChh
Confidence 4579999999886554
No 181
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=21.12 E-value=2.2e+02 Score=19.87 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=25.9
Q ss_pred CccCCccccCccchhHHHHHHHHHhc--CCCEEEEEcCCCC
Q 032854 36 GHITGSLHYPSDSFTDKIFDLIQEVR--GKDTLVFHCALSQ 74 (132)
Q Consensus 36 ~hI~gai~ip~~~~~~~~~~~~~~~~--~~~~ivv~c~~g~ 74 (132)
...||.++++...+...+..+...+. .-+.+|++-..|+
T Consensus 91 ~~fpGTisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGG 131 (267)
T 3no4_A 91 TAFPGTISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGG 131 (267)
T ss_dssp TTSTTCBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTT
T ss_pred cCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence 34799999998887776666655432 3466666665554
No 182
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=20.90 E-value=55 Score=23.63 Aligned_cols=17 Identities=18% Similarity=0.405 Sum_probs=12.8
Q ss_pred cCCCEEEEEcCCCCCCc
Q 032854 61 RGKDTLVFHCALSQVRG 77 (132)
Q Consensus 61 ~~~~~ivv~c~~g~~~~ 77 (132)
....||||+|..|..|+
T Consensus 235 ~~~~PiVVHCSAGvGRT 251 (342)
T 3i36_A 235 PPESPILVHCSAGVGRT 251 (342)
T ss_dssp CSSCCEEEESSSSSHHH
T ss_pred CCCCCEEEEcCCCChHH
Confidence 35689999998886453
No 183
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=20.68 E-value=1.7e+02 Score=20.22 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
....++|||++ ...+..++..|.+ .|+ ++..+.|++.
T Consensus 237 ~~~~~lvf~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 273 (367)
T 1hv8_A 237 KEFYGLVFCKT-----KRDTKELASMLRD----IGF-KAGAIHGDLS 273 (367)
T ss_dssp TTCCEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECSSSC
T ss_pred CCCcEEEEECC-----HHHHHHHHHHHHh----cCC-CeEEeeCCCC
Confidence 45678999964 2345566666654 787 7778888754
No 184
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=20.60 E-value=2.3e+02 Score=19.94 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccch
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF 107 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~ 107 (132)
...++++||++ ...+..++..|.+ .|+ .+..+.|++
T Consensus 265 ~~~~~lvf~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHT-----RKTASWLAAELSK----EGH-QVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSS-----HHHHHHHHHHHHH----TTC-CCEEECTTS
T ss_pred CCCCEEEEeCC-----HHHHHHHHHHHHh----CCC-eEEEecCCC
Confidence 45689999964 3345566666655 786 777888885
No 185
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=20.43 E-value=2.1e+02 Score=19.43 Aligned_cols=54 Identities=22% Similarity=0.182 Sum_probs=31.0
Q ss_pred HHHhhhCCCCeEEEeeCC-CCCcCCCccCCccccCccchhHHHHHHHHHhcCCCEEEEEcCCCC
Q 032854 12 QLLSLKRRPNIAVIDVRD-DERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (132)
Q Consensus 12 ~~~~~~~~~~~~liD~R~-~~e~~~~hI~gai~ip~~~~~~~~~~~~~~~~~~~~ivv~c~~g~ 74 (132)
.+++.+...+.-++|+-+ .... . ..+.+++...+...+.. .....-|+.|.+|.
T Consensus 24 ~l~~~L~~~G~eV~D~G~~~~~~------~--~~dYpd~a~~vA~~V~~-g~~d~GIliCGTGi 78 (214)
T 3ono_A 24 ELNSVAGGLGHDVFNVGMTDEND------H--HLTYIHLGIMASILLNS-KAVDFVVTGCGTGQ 78 (214)
T ss_dssp HHHHHHHHTTCEEEECSCSSTTS------S--CCCHHHHHHHHHHHHHT-TSCSEEEEEESSSH
T ss_pred HHHHHHHHCCCEEEEcCCCCCCC------C--CCCHHHHHHHHHHHHHc-CCCCEEEEEcCCcH
Confidence 566666655788999874 1111 1 23333444445554433 23466889999984
No 186
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=20.34 E-value=1.5e+02 Score=21.03 Aligned_cols=37 Identities=11% Similarity=0.189 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEeccchh
Q 032854 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (132)
Q Consensus 62 ~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~gG~~ 108 (132)
....++|||++ ...+..++..|.+ .|+ ++..+.|++.
T Consensus 275 ~~~~~lVf~~~-----~~~~~~l~~~L~~----~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 275 TITQAVIFCNT-----KRKVDWLTEKMRE----ANF-TVSSMHGDMP 311 (410)
T ss_dssp TSSEEEEECSS-----HHHHHHHHHHHHH----TTC-CCEEECTTSC
T ss_pred CCCcEEEEEcC-----HHHHHHHHHHHHh----CCC-ceEEeeCCCC
Confidence 34578999974 2345556666655 787 7788888864
No 187
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.25 E-value=1.7e+02 Score=18.32 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCCEEEEEcCCCCCCcHHHHHHHHHHHHHHhhhcCCccEEEec
Q 032854 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (132)
Q Consensus 53 ~~~~~~~~~~~~~ivv~c~~g~~~~~~~a~~l~~~L~~~~~~~G~~~v~~l~ 104 (132)
+.+....+...+.|+++.. | .+...+..++..|.. .|. ++..+.
T Consensus 29 l~~~~~~i~~a~~I~i~G~-G--~S~~~a~~~~~~l~~----~g~-~~~~~~ 72 (187)
T 3sho_A 29 IEAAVEAICRADHVIVVGM-G--FSAAVAVFLGHGLNS----LGI-RTTVLT 72 (187)
T ss_dssp HHHHHHHHHHCSEEEEECC-G--GGHHHHHHHHHHHHH----TTC-CEEEEC
T ss_pred HHHHHHHHHhCCEEEEEec-C--chHHHHHHHHHHHHh----cCC-CEEEec
Confidence 3333333445567776654 4 356667666666644 886 777777
No 188
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=20.11 E-value=2.5e+02 Score=20.60 Aligned_cols=16 Identities=6% Similarity=0.231 Sum_probs=12.8
Q ss_pred hhcCCccEEEeccchh
Q 032854 93 EDTGINSIFVLERGFK 108 (132)
Q Consensus 93 ~~~G~~~v~~l~gG~~ 108 (132)
++.+.+-+.++.|||.
T Consensus 283 ~~~~~p~v~~~eGGY~ 298 (367)
T 3max_A 283 KTFNLPLLMLGGGGYT 298 (367)
T ss_dssp HTTCCCEEEECCCCCS
T ss_pred HhcCCCEEEEeCCCCC
Confidence 4478778889999986
Done!