Your job contains 1 sequence.
>032855
MFSYQSVSIRVWERTRVLMSLCFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIV
RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG
SSGGAKKAFTAM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032855
(132 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172783 - symbol:RPS11-BETA "ribosomal protein... 526 1.3e-50 1
TAIR|locus:2101278 - symbol:EMB1080 "embryo defective 108... 525 1.7e-50 1
TAIR|locus:2126639 - symbol:AT4G30800 species:3702 "Arabi... 513 3.2e-49 1
ASPGD|ASPL0000026885 - symbol:AN5222 species:162425 "Emer... 396 8.0e-37 1
DICTYBASE|DDB_G0282601 - symbol:rps11 "40S ribosomal prot... 394 1.3e-36 1
GENEDB_PFALCIPARUM|PFC0775w - symbol:PFC0775w "40S riboso... 394 1.3e-36 1
SGD|S000002432 - symbol:RPS11A "Protein component of the ... 380 4.0e-35 1
SGD|S000000252 - symbol:RPS11B "Protein component of the ... 380 4.0e-35 1
UNIPROTKB|A0EZU4 - symbol:A0EZU4 "40S ribosomal protein S... 378 6.5e-35 1
UNIPROTKB|A2Q0S6 - symbol:rpS11 "Ribosomal protein S11" s... 376 1.1e-34 1
POMBASE|SPAC144.11 - symbol:rps1102 "40S ribosomal protei... 376 1.1e-34 1
POMBASE|SPAC31G5.03 - symbol:rps1101 "40S ribosomal prote... 376 1.1e-34 1
UNIPROTKB|Q90YR3 - symbol:Q90YR3 "40S ribosomal protein S... 374 1.7e-34 1
ZFIN|ZDB-GENE-040426-2701 - symbol:rps11 "ribosomal prote... 374 1.7e-34 1
UNIPROTKB|Q3T0V4 - symbol:RPS11 "40S ribosomal protein S1... 371 3.6e-34 1
UNIPROTKB|F2Z4N5 - symbol:RPS11 "40S ribosomal protein S1... 371 3.6e-34 1
UNIPROTKB|P62280 - symbol:RPS11 "40S ribosomal protein S1... 371 3.6e-34 1
UNIPROTKB|F2Z4Y8 - symbol:RPS11 "Uncharacterized protein"... 371 3.6e-34 1
MGI|MGI:1351329 - symbol:Rps11 "ribosomal protein S11" sp... 371 3.6e-34 1
RGD|621026 - symbol:Rps11 "ribosomal protein S11" species... 371 3.6e-34 1
UNIPROTKB|Q9XSU4 - symbol:RPS11 "40S ribosomal protein S1... 369 5.8e-34 1
UNIPROTKB|Q9DF27 - symbol:RS11 "40S ribosomal protein S11... 366 1.2e-33 1
FB|FBgn0033699 - symbol:RpS11 "Ribosomal protein S11" spe... 363 2.5e-33 1
UNIPROTKB|Q6XHX5 - symbol:RpS11 "40S ribosomal protein S1... 363 2.5e-33 1
WB|WBGene00004480 - symbol:rps-11 species:6239 "Caenorhab... 361 4.1e-33 1
UNIPROTKB|Q292D0 - symbol:RpS11 "40S ribosomal protein S1... 358 8.5e-33 1
UNIPROTKB|J9P7F5 - symbol:J9P7F5 "Uncharacterized protein... 351 4.7e-32 1
UNIPROTKB|F1N9W9 - symbol:RPS11 "Uncharacterized protein"... 342 4.2e-31 1
ZFIN|ZDB-GENE-081105-168 - symbol:si:dkey-159f12.2 "si:dk... 322 5.6e-29 1
RGD|1563352 - symbol:RGD1563352 "similar to ribosomal pro... 279 2.0e-24 1
RGD|1565560 - symbol:RGD1565560 "similar to ribosomal pro... 276 4.2e-24 1
UNIPROTKB|F1P553 - symbol:RPS11 "Uncharacterized protein"... 263 1.0e-22 1
UNIPROTKB|J9P3B4 - symbol:J9P3B4 "Uncharacterized protein... 242 1.7e-20 1
UNIPROTKB|G3MXJ7 - symbol:G3MXJ7 "Uncharacterized protein... 219 4.6e-18 1
UNIPROTKB|F1M0W9 - symbol:F1M0W9 "Uncharacterized protein... 121 1.1e-07 1
TIGR_CMR|CBU_0247 - symbol:CBU_0247 "ribosomal protein S1... 112 1.0e-06 1
TIGR_CMR|SO_0240 - symbol:SO_0240 "ribosomal protein S17"... 112 1.0e-06 1
TIGR_CMR|GSU_2848 - symbol:GSU_2848 "ribosomal protein S1... 105 5.5e-06 1
TAIR|locus:2010227 - symbol:emb1129 "embryo defective 112... 92 0.00013 1
UNIPROTKB|Q9KNZ3 - symbol:rpsQ "30S ribosomal protein S17... 87 0.00045 1
TIGR_CMR|VC_2587 - symbol:VC_2587 "ribosomal protein S17"... 87 0.00045 1
UNIPROTKB|P0AG63 - symbol:rpsQ species:83333 "Escherichia... 86 0.00057 1
TIGR_CMR|CHY_2300 - symbol:CHY_2300 "ribosomal protein S1... 86 0.00057 1
TIGR_CMR|CJE_1866 - symbol:CJE_1866 "ribosomal protein S1... 84 0.00093 1
TIGR_CMR|SPO_0494 - symbol:SPO_0494 "ribosomal protein S1... 84 0.00093 1
>TAIR|locus:2172783 [details] [associations]
symbol:RPS11-BETA "ribosomal protein S11-beta"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0006412 EMBL:AB005244 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 KO:K02949 eggNOG:COG0186 PANTHER:PTHR10744
UniGene:At.20778 HOGENOM:HOG000231341 ProtClustDB:CLSN2684220
TIGRFAMs:TIGR03630 EMBL:L07877 EMBL:AF360280 EMBL:AY062955
EMBL:AY087240 IPI:IPI00536907 RefSeq:NP_197763.1 UniGene:At.21971
ProteinModelPortal:P42733 SMR:P42733 STRING:P42733 PaxDb:P42733
PRIDE:P42733 EnsemblPlants:AT5G23740.1 GeneID:832439
KEGG:ath:AT5G23740 TAIR:At5g23740 InParanoid:P42733 OMA:ERYERRT
PhylomeDB:P42733 Genevestigator:P42733 GermOnline:AT5G23740
Uniprot:P42733
Length = 159
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 98/108 (90%), Positives = 101/108 (93%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G YID KCPFTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH
Sbjct: 52 GAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 111
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 112 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>TAIR|locus:2101278 [details] [associations]
symbol:EMB1080 "embryo defective 1080" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0009506 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 EMBL:AL132967
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 KO:K02949 GO:GO:0022627
eggNOG:COG0186 PANTHER:PTHR10744 EMBL:J05216 EMBL:L28828
EMBL:AY059947 EMBL:AY081614 EMBL:AY088032 IPI:IPI00541286
PIR:C35542 RefSeq:NP_190462.1 UniGene:At.20778 UniGene:At.21301
ProteinModelPortal:P16181 SMR:P16181 STRING:P16181 PaxDb:P16181
PRIDE:P16181 EnsemblPlants:AT3G48930.1 GeneID:824054
KEGG:ath:AT3G48930 TAIR:At3g48930 HOGENOM:HOG000231341
InParanoid:P16181 OMA:HIIIGQC PhylomeDB:P16181
ProtClustDB:CLSN2684220 Genevestigator:P16181 GermOnline:AT3G48930
TIGRFAMs:TIGR03630 Uniprot:P16181
Length = 160
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 98/109 (89%), Positives = 102/109 (93%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G Y+DKKCPFTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH
Sbjct: 52 GAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAH 111
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 132
+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 112 VSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>TAIR|locus:2126639 [details] [associations]
symbol:AT4G30800 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL022198
EMBL:AL161577 GO:GO:0019843 KO:K02949 GO:GO:0022627 eggNOG:COG0186
PANTHER:PTHR10744 HOGENOM:HOG000231341 ProtClustDB:CLSN2684220
TIGRFAMs:TIGR03630 EMBL:AY046037 EMBL:AY091204 IPI:IPI00548018
PIR:E85360 RefSeq:NP_194809.1 UniGene:At.2164
ProteinModelPortal:O65569 SMR:O65569 STRING:O65569 PaxDb:O65569
PRIDE:O65569 EnsemblPlants:AT4G30800.1 GeneID:829203
KEGG:ath:AT4G30800 TAIR:At4g30800 InParanoid:O65569 OMA:HVTIGQC
PhylomeDB:O65569 Genevestigator:O65569 GermOnline:AT4G30800
Uniprot:O65569
Length = 159
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 96/108 (88%), Positives = 101/108 (93%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYID+KCPFTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH
Sbjct: 52 GTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAH 111
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 112 VSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>ASPGD|ASPL0000026885 [details] [associations]
symbol:AN5222 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840
EMBL:BN001305 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AACD01000089 KO:K02949 eggNOG:COG0186
PANTHER:PTHR10744 HOGENOM:HOG000231341 OMA:HIIIGQC
TIGRFAMs:TIGR03630 OrthoDB:EOG4NZZ3N RefSeq:XP_662826.1
ProteinModelPortal:Q5B2K8 SMR:Q5B2K8 STRING:Q5B2K8
EnsemblFungi:CADANIAT00003221 GeneID:2871514 KEGG:ani:AN5222.2
Uniprot:Q5B2K8
Length = 160
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 75/106 (70%), Positives = 87/106 (82%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G+YIDKKCPFTG VSIRGRIL G S KM+RTII+RR YLH+V KY RYEKRH N+ AH
Sbjct: 55 GSYIDKKCPFTGMVSIRGRILTGRVVSTKMHRTIIIRREYLHYVPKYNRYEKRHKNLAAH 114
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 130
+SP FRV+EGD V +GQCRPLSKTVRFNVL+V+P +G A KAF+
Sbjct: 115 VSPAFRVEEGDWVTVGQCRPLSKTVRFNVLRVLPR--TGKAVKAFS 158
>DICTYBASE|DDB_G0282601 [details] [associations]
symbol:rps11 "40S ribosomal protein S11"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
dictyBase:DDB_G0282601 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02949 eggNOG:COG0186
PANTHER:PTHR10744 TIGRFAMs:TIGR03630 OMA:GAKKQFQ RefSeq:XP_640149.1
ProteinModelPortal:Q54S90 SMR:Q54S90 STRING:Q54S90 PRIDE:Q54S90
EnsemblProtists:DDB0230027 GeneID:8623687 KEGG:ddi:DDB_G0282601
ProtClustDB:PTZ00241 Uniprot:Q54S90
Length = 155
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 76/107 (71%), Positives = 84/107 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNIPAH
Sbjct: 51 GTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAH 110
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 131
+SP F VKEGD V IGQCRPLSKTVRFNV+K S +KK F A
Sbjct: 111 VSPAFNVKEGDSVTIGQCRPLSKTVRFNVIK---HDISAASKKQFKA 154
>GENEDB_PFALCIPARUM|PFC0775w [details] [associations]
symbol:PFC0775w "40S ribosomal protein S11,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844502 KO:K02949
PANTHER:PTHR10744 HOGENOM:HOG000231341 OMA:HIIIGQC
TIGRFAMs:TIGR03630 ProtClustDB:PTZ00241 PIR:T18498
RefSeq:XP_001351246.1 ProteinModelPortal:O77381 SMR:O77381
IntAct:O77381 MINT:MINT-1592353 PRIDE:O77381
EnsemblProtists:PFC0775w:mRNA GeneID:814490 KEGG:pfa:PFC0775w
EuPathDB:PlasmoDB:PF3D7_0317600 Uniprot:O77381
Length = 161
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 78/124 (62%), Positives = 88/124 (70%)
Query: 9 IRVWERTRVLMSL---CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYL 65
IR W++ + + G Y+DKKCPFTG VSIRGRIL G S KM RTII+RRNYL
Sbjct: 35 IRYWKKVGLGFATPKEAKEGVYVDKKCPFTGNVSIRGRILKGMVISNKMKRTIIIRRNYL 94
Query: 66 HFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 125
H+VKKY R+EKRH NIP H SPCF VKEGD V +GQCRPLSKTVRFNVL V G A
Sbjct: 95 HYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVTVGQCRPLSKTVRFNVLHVEKHQIFGSA 154
Query: 126 KKAF 129
+K F
Sbjct: 155 RKQF 158
>SGD|S000002432 [details] [associations]
symbol:RPS11A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000028 "ribosomal small subunit
assembly" evidence=IMP] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
SGD:S000002432 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0000028 GO:GO:0030686 EMBL:X95966 KO:K10570
RefSeq:NP_010308.3 GeneID:851589 KEGG:sce:YDR025W KO:K02949
GO:GO:0000462 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G EMBL:Z47814 RefSeq:NP_010313.3
GeneID:851594 KEGG:sce:YDR030C PANTHER:PTHR10744 TIGRFAMs:TIGR03630
EMBL:L15408 EMBL:Z74321 PIR:S41784 RefSeq:NP_009604.1 PDB:1K5X
PDBsum:1K5X ProteinModelPortal:P0CX47 SMR:P0CX47
EnsemblFungi:YBR048W EnsemblFungi:YDR025W GeneID:852337
KEGG:sce:YBR048W CYGD:YDR025w EvolutionaryTrace:P0CX47
NextBio:969066 ArrayExpress:P0CX47 GermOnline:YDR025W
Uniprot:P0CX47
Length = 156
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 69/105 (65%), Positives = 85/105 (80%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H
Sbjct: 51 GSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVH 110
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 111 VSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>SGD|S000000252 [details] [associations]
symbol:RPS11B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0000028
"ribosomal small subunit assembly" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0002181 "cytoplasmic translation" evidence=IC]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 SGD:S000000252 EMBL:BK006936
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0000028 GO:GO:0030686 KO:K10570
RefSeq:NP_010308.3 GeneID:851589 KEGG:sce:YDR025W KO:K02949
GO:GO:0000462 GO:GO:0022627 EMBL:Z46260 RefSeq:NP_010313.3
GeneID:851594 KEGG:sce:YDR030C EMBL:Z35918 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 PIR:S41784 RefSeq:NP_009604.1
EnsemblFungi:YBR048W EnsemblFungi:YDR025W GeneID:852337
KEGG:sce:YBR048W NextBio:969066 EMBL:L17004 EMBL:Z35917
ProteinModelPortal:P0CX48 SMR:P0CX48 CYGD:YBR048w
GeneTree:ENSGT00390000002732 ArrayExpress:P0CX48 GermOnline:YBR048W
Uniprot:P0CX48
Length = 156
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 69/105 (65%), Positives = 85/105 (80%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+P H
Sbjct: 51 GSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVH 110
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 111 VSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>UNIPROTKB|A0EZU4 [details] [associations]
symbol:A0EZU4 "40S ribosomal protein S11" species:52904
"Scophthalmus maximus" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 EMBL:DQ848873 ProteinModelPortal:A0EZU4
SMR:A0EZU4 Uniprot:A0EZU4
Length = 161
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 72/106 (67%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH NI H
Sbjct: 56 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNISVH 115
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 116 LSPCFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKAA---GAKKQF 158
>UNIPROTKB|A2Q0S6 [details] [associations]
symbol:rpS11 "Ribosomal protein S11" species:28829 "Solea
senegalensis" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 HOVERGEN:HBG004670 EMBL:AB291564
ProteinModelPortal:A2Q0S6 SMR:A2Q0S6 Uniprot:A2Q0S6
Length = 161
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 71/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 56 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNLSVH 115
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 116 LSPCFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKAA---GAKKQF 158
>POMBASE|SPAC144.11 [details] [associations]
symbol:rps1102 "40S ribosomal protein S11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 PomBase:SPAC31G5.03
PomBase:SPAC144.11 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
KO:K02949 GO:GO:0022627 eggNOG:COG0186 PANTHER:PTHR10744
HOGENOM:HOG000231341 TIGRFAMs:TIGR03630 OMA:GAKKQFQ EMBL:AB000704
EMBL:U97382 PIR:T37678 RefSeq:NP_594003.1 RefSeq:NP_594672.1
ProteinModelPortal:P79013 SMR:P79013 IntAct:P79013 STRING:P79013
PRIDE:P79013 EnsemblFungi:SPAC144.11.1 EnsemblFungi:SPAC31G5.03.1
GeneID:2542904 GeneID:2543120 KEGG:spo:SPAC144.11
KEGG:spo:SPAC31G5.03 OrthoDB:EOG4NZZ3N NextBio:20803943
Uniprot:P79013
Length = 152
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 67/93 (72%), Positives = 77/93 (82%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH
Sbjct: 48 GEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAH 107
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+
Sbjct: 108 VSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140
>POMBASE|SPAC31G5.03 [details] [associations]
symbol:rps1101 "40S ribosomal protein S11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=ISO] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 PomBase:SPAC31G5.03
PomBase:SPAC144.11 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
KO:K02949 GO:GO:0022627 eggNOG:COG0186 PANTHER:PTHR10744
HOGENOM:HOG000231341 TIGRFAMs:TIGR03630 OMA:GAKKQFQ EMBL:AB000704
EMBL:U97382 PIR:T37678 RefSeq:NP_594003.1 RefSeq:NP_594672.1
ProteinModelPortal:P79013 SMR:P79013 IntAct:P79013 STRING:P79013
PRIDE:P79013 EnsemblFungi:SPAC144.11.1 EnsemblFungi:SPAC31G5.03.1
GeneID:2542904 GeneID:2543120 KEGG:spo:SPAC144.11
KEGG:spo:SPAC31G5.03 OrthoDB:EOG4NZZ3N NextBio:20803943
Uniprot:P79013
Length = 152
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 67/93 (72%), Positives = 77/93 (82%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH
Sbjct: 48 GEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAH 107
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+
Sbjct: 108 VSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140
>UNIPROTKB|Q90YR3 [details] [associations]
symbol:Q90YR3 "40S ribosomal protein S11" species:7998
"Ictalurus punctatus" [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 HOVERGEN:HBG004670 HSSP:P23828 EMBL:AF402819
RefSeq:NP_001187218.1 UniGene:Ipu.58 ProteinModelPortal:Q90YR3
GeneID:100305055 Uniprot:Q90YR3
Length = 159
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 71/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 54 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 113
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 114 LSPCFRDVTVGDIVTVGECRPLSKTVRFNVLKVTKAA---GAKKQF 156
>ZFIN|ZDB-GENE-040426-2701 [details] [associations]
symbol:rps11 "ribosomal protein S11" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
ZFIN:ZDB-GENE-040426-2701 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02949
PANTHER:PTHR10744 TIGRFAMs:TIGR03630 GeneTree:ENSGT00390000002732
CTD:6205 HOVERGEN:HBG004670 OMA:GAKKQFQ HSSP:P23828 EMBL:CR388062
EMBL:BC046054 EMBL:BC159194 IPI:IPI00492036 RefSeq:NP_998542.1
UniGene:Dr.75616 STRING:Q7ZV05 Ensembl:ENSDART00000075028
GeneID:406686 KEGG:dre:406686 InParanoid:Q7ZV05 NextBio:20818213
Uniprot:Q7ZV05
Length = 159
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 71/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 54 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 113
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 114 LSPCFRDVTVGDIVTVGECRPLSKTVRFNVLKVTKAA---GAKKQF 156
>UNIPROTKB|Q3T0V4 [details] [associations]
symbol:RPS11 "40S ribosomal protein S11" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 KO:K02949
GO:GO:0022627 eggNOG:COG0186 PANTHER:PTHR10744 HOGENOM:HOG000231341
TIGRFAMs:TIGR03630 GeneTree:ENSGT00390000002732 EMBL:AY911366
EMBL:BC102249 IPI:IPI00689811 RefSeq:NP_001019739.1 UniGene:Bt.3626
ProteinModelPortal:Q3T0V4 SMR:Q3T0V4 STRING:Q3T0V4 PRIDE:Q3T0V4
Ensembl:ENSBTAT00000018491 GeneID:539196 KEGG:bta:539196 CTD:6205
HOVERGEN:HBG004670 InParanoid:Q3T0V4 OMA:GAKKQFQ OrthoDB:EOG4MGS8N
NextBio:20877840 Uniprot:Q3T0V4
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|F2Z4N5 [details] [associations]
symbol:RPS11 "40S ribosomal protein S11" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02949
GO:GO:0022627 PANTHER:PTHR10744 TIGRFAMs:TIGR03630
GeneTree:ENSGT00390000002732 CTD:6205 OMA:GAKKQFQ UniGene:Cfa.39143
EMBL:AAEX03000800 RefSeq:XP_533619.2 ProteinModelPortal:F2Z4N5
SMR:F2Z4N5 PRIDE:F2Z4N5 Ensembl:ENSCAFT00000022721 GeneID:403684
KEGG:cfa:403684 NextBio:20817188 Uniprot:F2Z4N5
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|P62280 [details] [associations]
symbol:RPS11 "40S ribosomal protein S11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=NAS] [GO:0006412 "translation"
evidence=IC;NAS;TAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
EMBL:CH471177 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 KO:K02949 GO:GO:0006415 GO:GO:0006414 GO:GO:0022627
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083 EMBL:AB028893
eggNOG:COG0186 PANTHER:PTHR10744 HOGENOM:HOG000231341
TIGRFAMs:TIGR03630 CTD:6205 HOVERGEN:HBG004670 OMA:GAKKQFQ
OrthoDB:EOG4MGS8N ChiTaRS:RPS11 EMBL:X06617 EMBL:AK311809
EMBL:BC007283 EMBL:BC007603 EMBL:BC007945 EMBL:BC010028
EMBL:BC016378 EMBL:BC070224 EMBL:BC100025 EMBL:AB007152
IPI:IPI00025091 PIR:S02133 RefSeq:NP_001006.1 UniGene:Hs.433529
ProteinModelPortal:P62280 SMR:P62280 IntAct:P62280
MINT:MINT-1154341 STRING:P62280 PhosphoSite:P62280 DMDM:50403609
SWISS-2DPAGE:P62280 PaxDb:P62280 PeptideAtlas:P62280 PRIDE:P62280
DNASU:6205 Ensembl:ENST00000270625 GeneID:6205 KEGG:hsa:6205
UCSC:uc002pob.1 GeneCards:GC19P049999 H-InvDB:HIX0037158
HGNC:HGNC:10384 HPA:HPA049719 MIM:180471 neXtProt:NX_P62280
PharmGKB:PA34782 InParanoid:P62280 PhylomeDB:P62280 GenomeRNAi:6205
NextBio:24099 PMAP-CutDB:P62280 Bgee:P62280 CleanEx:HS_RPS11
Genevestigator:P62280 GermOnline:ENSG00000142534 Uniprot:P62280
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|F2Z4Y8 [details] [associations]
symbol:RPS11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02949 GO:GO:0022627 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 GeneTree:ENSGT00390000002732 CTD:6205
OMA:GAKKQFQ EMBL:FP102665 RefSeq:NP_001230999.1 UniGene:Ssc.54656
UniGene:Ssc.75385 SMR:F2Z4Y8 Ensembl:ENSSSCT00000003515
GeneID:100513660 KEGG:ssc:100513660 Uniprot:F2Z4Y8
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>MGI|MGI:1351329 [details] [associations]
symbol:Rps11 "ribosomal protein S11" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
MGI:MGI:1351329 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 KO:K02949
GO:GO:0022627 eggNOG:COG0186 PANTHER:PTHR10744 HOGENOM:HOG000231341
TIGRFAMs:TIGR03630 CTD:6205 HOVERGEN:HBG004670 OMA:GAKKQFQ
ChiTaRS:RPS11 EMBL:U93864 EMBL:AB028894 EMBL:BC012641
IPI:IPI00762542 RefSeq:NP_038753.1 UniGene:Mm.196538
UniGene:Mm.389435 ProteinModelPortal:P62281 SMR:P62281
DIP:DIP-59975N STRING:P62281 PhosphoSite:P62281 PaxDb:P62281
PRIDE:P62281 Ensembl:ENSMUST00000003521 GeneID:27207 KEGG:mmu:27207
NextBio:305079 Bgee:P62281 CleanEx:MM_RPS11 Genevestigator:P62281
GermOnline:ENSMUSG00000003429 Uniprot:P62281
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>RGD|621026 [details] [associations]
symbol:Rps11 "ribosomal protein S11" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 RGD:621026 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
KO:K02949 GO:GO:0022627 eggNOG:COG0186 PANTHER:PTHR10744
HOGENOM:HOG000231341 TIGRFAMs:TIGR03630
GeneTree:ENSGT00390000002732 CTD:6205 HOVERGEN:HBG004670
OrthoDB:EOG4MGS8N EMBL:K03250 IPI:IPI00197713 PIR:A22618
RefSeq:NP_112372.1 UniGene:Rn.2177 ProteinModelPortal:P62282
SMR:P62282 IntAct:P62282 STRING:P62282 PRIDE:P62282
Ensembl:ENSRNOT00000066328 GeneID:81774 KEGG:rno:81774
UCSC:RGD:621026 InParanoid:P62282 NextBio:615597
ArrayExpress:P62282 Genevestigator:P62282
GermOnline:ENSRNOG00000020595 Uniprot:P62282
Length = 158
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/106 (66%), Positives = 83/106 (78%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|Q9XSU4 [details] [associations]
symbol:RPS11 "40S ribosomal protein S11" species:9615
"Canis lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 PROSITE:PS00056
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 eggNOG:COG0186
PANTHER:PTHR10744 HOGENOM:HOG000231341 TIGRFAMs:TIGR03630
HOVERGEN:HBG004670 OrthoDB:EOG4MGS8N EMBL:CX985417 EMBL:AJ388520
UniGene:Cfa.39143 PDB:2ZKQ PDBsum:2ZKQ STRING:Q9XSU4
InParanoid:Q9XSU4 EvolutionaryTrace:Q9XSU4 Uniprot:Q9XSU4
Length = 158
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 70/106 (66%), Positives = 82/106 (77%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVHIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|Q9DF27 [details] [associations]
symbol:RS11 "40S ribosomal protein S11" species:8030 "Salmo
salar" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744
TIGRFAMs:TIGR03630 HOVERGEN:HBG004670 HSSP:P23828 EMBL:AF304161
EMBL:BT046932 EMBL:BT049673 EMBL:BT058141 EMBL:BT058210
EMBL:BT059841 EMBL:BT059910 RefSeq:NP_001117010.1 UniGene:Ssa.23455
ProteinModelPortal:Q9DF27 GeneID:100136373 Uniprot:Q9DF27
Length = 161
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 70/106 (66%), Positives = 82/106 (77%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 56 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 115
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SP FR V GD V +G+CRPLSKTVRFNVLKV A GAKK F
Sbjct: 116 LSPAFRDVSVGDIVTVGECRPLSKTVRFNVLKVTKAA---GAKKQF 158
>FB|FBgn0033699 [details] [associations]
symbol:RpS11 "Ribosomal protein S11" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 EMBL:AE013599 GO:GO:0022008 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0000022 KO:K02949
eggNOG:COG0186 PANTHER:PTHR10744 TIGRFAMs:TIGR03630
GeneTree:ENSGT00390000002732 CTD:6205 OMA:GAKKQFQ EMBL:BT088759
EMBL:BT088761 RefSeq:NP_725114.1 UniGene:Dm.29459
ProteinModelPortal:Q0E9B6 SMR:Q0E9B6 IntAct:Q0E9B6 STRING:Q0E9B6
PaxDb:Q0E9B6 PRIDE:Q0E9B6 EnsemblMetazoa:FBtr0088007 GeneID:36321
KEGG:dme:Dmel_CG8857 FlyBase:FBgn0033699 InParanoid:Q0E9B6
OrthoDB:EOG40K6G8 PhylomeDB:Q0E9B6 ChiTaRS:RPS11 GenomeRNAi:36321
NextBio:797898 Bgee:Q0E9B6 Uniprot:Q0E9B6
Length = 155
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 73/107 (68%), Positives = 83/107 (77%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H
Sbjct: 50 GTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVH 109
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG-GAKKAF 129
SP FR V+ GD V IG+CRPLSKTVRFNVLKV S G GAKK+F
Sbjct: 110 CSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV----SKGQGAKKSF 152
>UNIPROTKB|Q6XHX5 [details] [associations]
symbol:RpS11 "40S ribosomal protein S11" species:7245
"Drosophila yakuba" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000266
InterPro:IPR019978 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 eggNOG:COG0186 PANTHER:PTHR10744 TIGRFAMs:TIGR03630
OrthoDB:EOG40K6G8 EMBL:AY231785 EMBL:AY232057
ProteinModelPortal:Q6XHX5 SMR:Q6XHX5 STRING:Q6XHX5
FlyBase:FBgn0068208 Uniprot:Q6XHX5
Length = 155
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 73/107 (68%), Positives = 83/107 (77%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+ H
Sbjct: 50 GTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVH 109
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSG-GAKKAF 129
SP FR V+ GD V IG+CRPLSKTVRFNVLKV S G GAKK+F
Sbjct: 110 CSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV----SKGQGAKKSF 152
>WB|WBGene00004480 [details] [associations]
symbol:rps-11 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0019915 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02949
eggNOG:COG0186 PANTHER:PTHR10744 HOGENOM:HOG000231341
TIGRFAMs:TIGR03630 GeneTree:ENSGT00390000002732 HSSP:P23828
EMBL:Z73426 PIR:T22027 RefSeq:NP_502186.1 ProteinModelPortal:Q20206
SMR:Q20206 DIP:DIP-26076N MINT:MINT-1096800 STRING:Q20206
PaxDb:Q20206 EnsemblMetazoa:F40F11.1.1 EnsemblMetazoa:F40F11.1.2
GeneID:178083 KEGG:cel:CELE_F40F11.1 UCSC:F40F11.1.1 CTD:178083
WormBase:F40F11.1 InParanoid:Q20206 OMA:LVTIGEC NextBio:899642
Uniprot:Q20206
Length = 155
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 70/107 (65%), Positives = 81/107 (75%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCP+ G V IRG IL G KM RTI+VRR+YLH++KKY+RYEKRH N+PAH
Sbjct: 50 GTYIDKKCPWAGNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAH 109
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 130
SP FR + GD V IG+CRPLSKTVRFNVLKV SG +KK F+
Sbjct: 110 CSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV---NKSGTSKKGFS 153
>UNIPROTKB|Q292D0 [details] [associations]
symbol:RpS11 "40S ribosomal protein S11" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000266 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:CM000071 GenomeReviews:CM000071_GR GO:GO:0019843 KO:K02949
eggNOG:COG0186 PANTHER:PTHR10744 OrthoDB:EOG40K6G8
RefSeq:XP_001360357.2 GeneID:4803680 KEGG:dpo:Dpse_GA21371
FlyBase:FBgn0081359 InParanoid:Q292D0 Uniprot:Q292D0
Length = 155
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 70/106 (66%), Positives = 80/106 (75%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCP+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+ H
Sbjct: 50 GTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVH 109
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 110 CSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
>UNIPROTKB|J9P7F5 [details] [associations]
symbol:J9P7F5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000266 InterPro:IPR019978
InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR10744 TIGRFAMs:TIGR03630 OMA:HVTIGQC
GeneTree:ENSGT00390000002732 EMBL:AAEX03007951
Ensembl:ENSCAFT00000029744 Uniprot:J9P7F5
Length = 158
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 67/106 (63%), Positives = 81/106 (76%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRGRIL+G KM RTI++ ++YLH+++KY R+EK H N+ H
Sbjct: 53 GTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVICQDYLHYIRKYNRFEKTHKNMLVH 112
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 113 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|F1N9W9 [details] [associations]
symbol:RPS11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019978 InterPro:IPR019979
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744 TIGRFAMs:TIGR03630
GeneTree:ENSGT00390000002732 OMA:LVTIGEC EMBL:AADN02055263
EMBL:AADN02055264 IPI:IPI00596603 Ensembl:ENSGALT00000036375
Uniprot:F1N9W9
Length = 108
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 66/106 (62%), Positives = 81/106 (76%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYI+K CP+ G VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+ H
Sbjct: 4 GTYIEK-CPYPGYVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVH 62
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 63 LSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA---GTKKQF 105
>ZFIN|ZDB-GENE-081105-168 [details] [associations]
symbol:si:dkey-159f12.2 "si:dkey-159f12.2"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000266 Pfam:PF00366
PRINTS:PR00973 ProDom:PD001295 ZFIN:ZDB-GENE-081105-168
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 eggNOG:COG0186 PANTHER:PTHR10744
GeneTree:ENSGT00390000002732 HOVERGEN:HBG004670 OrthoDB:EOG4MGS8N
EMBL:CR936926 IPI:IPI00882845 Ensembl:ENSDART00000137968
Uniprot:A9C3W5
Length = 172
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 61/96 (63%), Positives = 74/96 (77%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPFTG VSIRG IL+G KM RTI++RR+ LH+++KY R+EKRH N+ H
Sbjct: 54 GTYIDKKCPFTGNVSIRGWILSGVVTKMKMQRTIVIRRDNLHYIRKYNRFEKRHKNMSVH 113
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPA 119
+SPCFR V GD V +G+ + LSKTVRFNVLKV A
Sbjct: 114 LSPCFRDVTVGDIVTVGEWQTLSKTVRFNVLKVTKA 149
>RGD|1563352 [details] [associations]
symbol:RGD1563352 "similar to ribosomal protein S11"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000266 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
RGD:1563352 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627 PANTHER:PTHR10744
GeneTree:ENSGT00390000002732 OrthoDB:EOG4MGS8N IPI:IPI00557008
RefSeq:XP_001056309.1 RefSeq:XP_575471.1 Ensembl:ENSRNOT00000012694
GeneID:500119 KEGG:rno:500119 UCSC:RGD:1563352 CTD:500119
NextBio:705147 Uniprot:D3ZYK5
Length = 158
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 53/106 (50%), Positives = 73/106 (68%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
GTYIDKKCPF G VSI+GR+L K+ RT+ +R++ LH+++KY R+EK+ N P
Sbjct: 53 GTYIDKKCPFPGNVSIQGRMLFVVVKKMKLQRTVAIRQDCLHYIRKYNRFEKQPKNTPVR 112
Query: 85 ISPCFRVKE-GDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
+SPCFRV + D V +G+CRPLSKTV +++ KV A G +K F
Sbjct: 113 LSPCFRVVQINDIVTVGECRPLSKTVFYSMCKVTTAA---GTRKQF 155
>RGD|1565560 [details] [associations]
symbol:RGD1565560 "similar to ribosomal protein S11"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000266 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
RGD:1565560 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR10744 GeneTree:ENSGT00390000002732 OrthoDB:EOG4MGS8N
IPI:IPI00210893 RefSeq:XP_001060544.1 RefSeq:XP_223504.1
Ensembl:ENSRNOT00000006659 GeneID:289701 KEGG:rno:289701
UCSC:RGD:1565560 CTD:289701 NextBio:630170 Uniprot:D3ZMX7
Length = 158
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 59/107 (55%), Positives = 72/107 (67%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G+Y DKKCPFTG VSIRG IL+G KM RTI++ R+YLH++ KY EK H N+P H
Sbjct: 53 GSYRDKKCPFTGNVSIRGWILSGFMTKMKMQRTIVIHRDYLHYILKYICIEKHHKNMPVH 112
Query: 85 ISPCFR--VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
S F+ + D V +G+CRPLSKTV+FNVLKV A G KK F
Sbjct: 113 QSS-FQGCPDQCDIVTVGECRPLSKTVQFNVLKVTKAA---GTKKQF 155
>UNIPROTKB|F1P553 [details] [associations]
symbol:RPS11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019979 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627
PANTHER:PTHR10744 GeneTree:ENSGT00390000002732 EMBL:AADN02055263
EMBL:AADN02055264 IPI:IPI00823082 Ensembl:ENSGALT00000027954
Uniprot:F1P553
Length = 84
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 47 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPL 105
G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD V +G+CRPL
Sbjct: 1 GVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPL 60
Query: 106 SKTVRFNVLKVIPAGSSGGAKKAF 129
SKTVRFNVLKV A G KK F
Sbjct: 61 SKTVRFNVLKVTKAA---GTKKQF 81
>UNIPROTKB|J9P3B4 [details] [associations]
symbol:J9P3B4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000266
Pfam:PF00366 ProDom:PD001295 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR10744 GeneTree:ENSGT00390000002732 EMBL:AAEX03026520
Ensembl:ENSCAFT00000044636 OMA:FRDVNIG Uniprot:J9P3B4
Length = 147
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 28 IDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISP 87
IDKKCPF VSI+G+IL+ K++RTI++ ++YLH+++KY ++K H N+ H+SP
Sbjct: 45 IDKKCPFPNNVSIQGQILSCVVIKVKIHRTIVICQDYLHYIQKYNCFKKCHKNMSLHLSP 104
Query: 88 CFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 127
CFR V G+ V +G+C+PL + V FN+LKV + G KK
Sbjct: 105 CFRDVNIGNVVTVGECQPLREIVCFNMLKVT---KTTGTKK 142
>UNIPROTKB|G3MXJ7 [details] [associations]
symbol:G3MXJ7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000266 Pfam:PF00366
ProDom:PD001295 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR10744 GeneTree:ENSGT00390000002732 EMBL:DAAA02017740
Ensembl:ENSBTAT00000003005 OMA:FERGHRN NextBio:20869123
Uniprot:G3MXJ7
Length = 157
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 44/99 (44%), Positives = 63/99 (63%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G YIDKKC FTG SI+G+IL+ + ++I +YL +++KY R+E+ H N+ H
Sbjct: 53 GNYIDKKCRFTGNGSIQGQILSSDQNEDGEGHSLICP-DYLRYIRKYNRFERGHRNMSVH 111
Query: 85 ISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 122
+SPCFR ++ GD +G C P SKTV F+V KV A +
Sbjct: 112 LSPCFRDIQIGDIFTVGTCWPRSKTVPFHVRKVTKAADT 150
>UNIPROTKB|F1M0W9 [details] [associations]
symbol:F1M0W9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000266
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10744
GeneTree:ENSGT00390000002732 IPI:IPI00950657
Ensembl:ENSRNOT00000065668 Uniprot:F1M0W9
Length = 75
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTI 58
GTYIDKKCPFT +SIRGRIL+G KM RT+
Sbjct: 42 GTYIDKKCPFTVNISIRGRILSGVMTKIKMQRTM 75
>TIGR_CMR|CBU_0247 [details] [associations]
symbol:CBU_0247 "ribosomal protein S17" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000266 InterPro:IPR019979
InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 eggNOG:COG0186
KO:K02961 PANTHER:PTHR10744 HOGENOM:HOG000231339
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
OMA:TIRECRP RefSeq:NP_819291.2 ProteinModelPortal:Q83ER7 SMR:Q83ER7
GeneID:1208128 KEGG:cbu:CBU_0247 PATRIC:17929187
BioCyc:CBUR227377:GJ7S-253-MONOMER Uniprot:Q83ER7
Length = 89
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 43 RILAGTCHSAKMNRTIIVR--RNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 100
R L GT S KMN T++VR R H KY ++ KR + I AH + GD V I
Sbjct: 9 RSLMGTVVSNKMNDTVVVRVERRVKH--PKYGKFIKRSTKIHAH-DKGNEGQIGDIVTIR 65
Query: 101 QCRPLSKTVRFNVLKV 116
+CRP+SKT + ++K+
Sbjct: 66 ECRPISKTKSWTLVKI 81
>TIGR_CMR|SO_0240 [details] [associations]
symbol:SO_0240 "ribosomal protein S17" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000266 InterPro:IPR019979 InterPro:IPR019984
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744
HOGENOM:HOG000231339 ProtClustDB:PRK05610 HAMAP:MF_01345_B
TIGRFAMs:TIGR03635 OMA:TIRECRP RefSeq:NP_715880.1
ProteinModelPortal:Q8EK60 SMR:Q8EK60 GeneID:1168123
KEGG:son:SO_0240 PATRIC:23520173 Uniprot:Q8EK60
Length = 82
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 43 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 100
R L G S KM++TI V R H + Y +Y KR + I AH + EGD V I
Sbjct: 6 RTLQGRVTSNKMDKTITVAIERQVKHPI--YGKYIKRTTKIHAH-DEANQCNEGDVVAIR 62
Query: 101 QCRPLSKTVRFNVLKVI 117
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVEVV 79
>TIGR_CMR|GSU_2848 [details] [associations]
symbol:GSU_2848 "ribosomal protein S17" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000266
InterPro:IPR019979 InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744 HOGENOM:HOG000231339
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
OMA:TIRECRP RefSeq:NP_953891.1 ProteinModelPortal:Q748Z7
GeneID:2688722 KEGG:gsu:GSU2848 PATRIC:22028543
BioCyc:GSUL243231:GH27-2814-MONOMER Uniprot:Q748Z7
Length = 85
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 38 VSIRG--RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGD 95
+S RG + G S KM++T++VR ++L Y +Y KR AH + K GD
Sbjct: 1 MSQRGNRKTQVGVVVSDKMDKTVVVRVSHLVKHPVYNKYIKRSVKYKAHDTDN-SCKTGD 59
Query: 96 HVIIGQCRPLSKTVRFNVLKVI 117
V+I + RPLSK R+ V ++I
Sbjct: 60 RVLIVETRPLSKDKRWKVRQII 81
>TAIR|locus:2010227 [details] [associations]
symbol:emb1129 "embryo defective 1129" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR000266
InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AC007504 eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744
HOGENOM:HOG000231339 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
OMA:CRLVEIV HSSP:P23828 ProtClustDB:CLSN2682485 EMBL:BT005147
EMBL:AK118089 IPI:IPI00536541 PIR:D96530 RefSeq:NP_175365.1
UniGene:At.38232 ProteinModelPortal:Q9XIA6 SMR:Q9XIA6 STRING:Q9XIA6
PaxDb:Q9XIA6 PRIDE:Q9XIA6 EnsemblPlants:AT1G49400.1 GeneID:841363
KEGG:ath:AT1G49400 TAIR:At1g49400 InParanoid:Q9XIA6
PhylomeDB:Q9XIA6 ArrayExpress:Q9XIA6 Genevestigator:Q9XIA6
Uniprot:Q9XIA6
Length = 116
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 29/86 (33%), Positives = 39/86 (45%)
Query: 47 GTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLS 106
GT S KM ++++V + L K Y RY KR S AH GD V + RPLS
Sbjct: 6 GTVVSNKMQKSVVVAVDRLFHNKIYNRYVKRTSKFMAHDDKD-ACNIGDRVKLDPSRPLS 64
Query: 107 KTVRFNVLKVIPAGSSGGAKKAFTAM 132
K + V ++I K A A+
Sbjct: 65 KNKHWIVAEIIKKARIYSPKAAAAAV 90
>UNIPROTKB|Q9KNZ3 [details] [associations]
symbol:rpsQ "30S ribosomal protein S17" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000266 InterPro:IPR019979
InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744 ProtClustDB:PRK05610
HAMAP:MF_01345_B TIGRFAMs:TIGR03635 PIR:E82058 RefSeq:NP_232215.1
ProteinModelPortal:Q9KNZ3 SMR:Q9KNZ3 PRIDE:Q9KNZ3 DNASU:2615604
GeneID:2615604 KEGG:vch:VC2587 PATRIC:20084200 OMA:KLKTWKV
Uniprot:Q9KNZ3
Length = 84
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 43 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 100
R G S KM+++I+V R H + Y ++ KR + + AH GD V I
Sbjct: 6 RTQLGRVVSDKMDKSIVVAIERMVKHPI--YGKFVKRTTKVHAH-DENNECGIGDTVEIR 62
Query: 101 QCRPLSKTVRFNVLKVI 117
+CRPLSKT + ++K++
Sbjct: 63 ECRPLSKTKSWTLVKIV 79
>TIGR_CMR|VC_2587 [details] [associations]
symbol:VC_2587 "ribosomal protein S17" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000266 InterPro:IPR019979 InterPro:IPR019984
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635 PIR:E82058
RefSeq:NP_232215.1 ProteinModelPortal:Q9KNZ3 SMR:Q9KNZ3
PRIDE:Q9KNZ3 DNASU:2615604 GeneID:2615604 KEGG:vch:VC2587
PATRIC:20084200 OMA:KLKTWKV Uniprot:Q9KNZ3
Length = 84
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 43 RILAGTCHSAKMNRTIIV--RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIG 100
R G S KM+++I+V R H + Y ++ KR + + AH GD V I
Sbjct: 6 RTQLGRVVSDKMDKSIVVAIERMVKHPI--YGKFVKRTTKVHAH-DENNECGIGDTVEIR 62
Query: 101 QCRPLSKTVRFNVLKVI 117
+CRPLSKT + ++K++
Sbjct: 63 ECRPLSKTKSWTLVKIV 79
>UNIPROTKB|P0AG63 [details] [associations]
symbol:rpsQ species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0070181 "SSU rRNA
binding" evidence=IDA] [GO:0046677 "response to antibiotic"
evidence=IEA;IMP] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000266 InterPro:IPR019979 InterPro:IPR019984
Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295 PROSITE:PS00056
EMBL:X01563 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0046677 EMBL:U18997
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PDB:3J00 PDBsum:3J00 GO:GO:0070181 PDB:3FIH PDB:3IZV PDB:3IZW
PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 PDB:3SFS PDB:3UOQ
PDBsum:3SFS PDBsum:3UOQ PDB:1EG0 PDBsum:1EG0 EMBL:V00357
EMBL:X02613 eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2WWL
PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O
PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X
PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR
PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9
PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G
PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5 PDBsum:1VS7 PDBsum:2AVY
PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB PDBsum:2I2P PDBsum:2I2U
PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9 PDBsum:2QBB PDBsum:2QBD
PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ PDBsum:2QOU PDBsum:2QOW
PDBsum:2QOY PDBsum:2QP0 PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K
PDBsum:2Z4M PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O
PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U
PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13
PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA
PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY
PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ
PDBsum:4GD2 HOGENOM:HOG000231339 ProtClustDB:PRK05610
HAMAP:MF_01345_B TIGRFAMs:TIGR03635 OMA:TIRECRP PIR:A37519
RefSeq:NP_417770.1 RefSeq:YP_492121.1 ProteinModelPortal:P0AG63
SMR:P0AG63 DIP:DIP-47952N IntAct:P0AG63 PRIDE:P0AG63
EnsemblBacteria:EBESCT00000002794 EnsemblBacteria:EBESCT00000018159
GeneID:12934391 GeneID:947808 KEGG:ecj:Y75_p3865 KEGG:eco:b3311
PATRIC:32122054 EchoBASE:EB0909 EcoGene:EG10916
BioCyc:EcoCyc:EG10916-MONOMER BioCyc:ECOL316407:JW3273-MONOMER
EvolutionaryTrace:P0AG63 Genevestigator:P0AG63 Uniprot:P0AG63
Length = 84
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 43 RILAGTCHSAKMNRTIIVRRNYLHFVKK--YQRYEKRHSNIPAHISPCFRVKEGDHVIIG 100
R L G S KM ++I+V FVK Y ++ KR + + H GD V I
Sbjct: 6 RTLQGRVVSDKMEKSIVVAIE--RFVKHPIYGKFIKRTTKLHVH-DENNECGIGDVVEIR 62
Query: 101 QCRPLSKTVRFNVLKVI 117
+CRPLSKT + +++V+
Sbjct: 63 ECRPLSKTKSWTLVRVV 79
>TIGR_CMR|CHY_2300 [details] [associations]
symbol:CHY_2300 "ribosomal protein S17" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000266 InterPro:IPR019979
InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 eggNOG:COG0186
KO:K02961 PANTHER:PTHR10744 HOGENOM:HOG000231339
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
OMA:TIRECRP RefSeq:YP_361109.1 ProteinModelPortal:Q3A9S5 SMR:Q3A9S5
STRING:Q3A9S5 GeneID:3728245 KEGG:chy:CHY_2300 PATRIC:21277671
BioCyc:CHYD246194:GJCN-2299-MONOMER Uniprot:Q3A9S5
Length = 98
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 43 RILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI--SPCFRVKEGDHVIIG 100
+I G S KM++T++V L Y++ +R AH + C + GD V I
Sbjct: 8 KIKIGRVVSDKMDKTVVVAVEELVSHPLYKKTIRRTKKFKAHDEHNAC---RTGDIVKIA 64
Query: 101 QCRPLSKTVRFNVLKVIPAGSSGGAKK 127
+ RPLSK R+ V+++I G G ++
Sbjct: 65 ETRPLSKEKRWRVVEIIERGKVLGEEE 91
>TIGR_CMR|CJE_1866 [details] [associations]
symbol:CJE_1866 "ribosomal protein S17" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000266
InterPro:IPR019979 InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973
ProDom:PD001295 PROSITE:PS00056 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
eggNOG:COG0186 KO:K02961 PANTHER:PTHR10744 HOGENOM:HOG000231339
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
RefSeq:YP_179836.1 ProteinModelPortal:Q5HS99 STRING:Q5HS99
GeneID:3232493 KEGG:cjr:CJE1866 PATRIC:20045564 OMA:WIVVKDS
BioCyc:CJEJ195099:GJC0-1905-MONOMER Uniprot:Q5HS99
Length = 83
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 57 TIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
+++V R +H +Y++ KR H VK GD V+ +CRPLSK F + V
Sbjct: 21 SVLVERKVVH--PRYRKIVKRFKKYLIH-DERNEVKVGDTVVAVECRPLSKRKSFRLKSV 77
Query: 117 IPAG 120
+ G
Sbjct: 78 LATG 81
>TIGR_CMR|SPO_0494 [details] [associations]
symbol:SPO_0494 "ribosomal protein S17" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000266
InterPro:IPR019984 Pfam:PF00366 PRINTS:PR00973 ProDom:PD001295
PROSITE:PS00056 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 eggNOG:COG0186
KO:K02961 PANTHER:PTHR10744 HOGENOM:HOG000231339
ProtClustDB:PRK05610 HAMAP:MF_01345_B TIGRFAMs:TIGR03635
OMA:WIVVKDS RefSeq:YP_165756.1 ProteinModelPortal:Q5LW49 SMR:Q5LW49
GeneID:3194784 KEGG:sil:SPO0494 PATRIC:23374249 Uniprot:Q5LW49
Length = 76
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 43 RILAGTCHS-AKMNR-TIIVRRNYLHFV-KKYQRYEKRHSNIPAHISP-CFRVKEGDHVI 98
RIL GT S A T++V R + H V KK R K++ AH F+V GD V
Sbjct: 4 RILQGTVTSDANAQTVTVLVERRFTHPVLKKTIRKSKKYR---AHDEKNAFKV--GDTVR 58
Query: 99 IGQCRPLSKTVRFNVLK 115
I +C P SKT R+ VL+
Sbjct: 59 IIECAPKSKTKRWEVLE 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.137 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 132 0.00091 102 3 11 22 0.45 30
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 570 (61 KB)
Total size of DFA: 134 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.13u 0.11s 13.24t Elapsed: 00:00:00
Total cpu time: 13.14u 0.11s 13.25t Elapsed: 00:00:00
Start: Fri May 10 06:03:10 2013 End: Fri May 10 06:03:10 2013