BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032855
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1
Length = 159
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 104/109 (95%), Positives = 107/109 (98%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPA
Sbjct: 51 DGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
H+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+
Sbjct: 111 HVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
>sp|P17093|RS11_SOYBN 40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2
Length = 159
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 104/109 (95%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GTYIDKKCPFTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPA
Sbjct: 51 EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
HISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M
Sbjct: 111 HISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
>sp|P42733|RS113_ARATH 40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2
SV=2
Length = 159
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 101/109 (92%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
G YID KCPFTGTVSIRGRILAGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPA
Sbjct: 51 DGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
H+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT +
Sbjct: 111 HVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
>sp|P16181|RS111_ARATH 40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2
SV=1
Length = 160
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/110 (89%), Positives = 102/110 (92%), Gaps = 1/110 (0%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
G Y+DKKCPFTGTVSIRGRILAGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPA
Sbjct: 51 DGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 132
H+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 111 HVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
>sp|O65569|RS112_ARATH 40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2
SV=2
Length = 159
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/109 (88%), Positives = 101/109 (92%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GTYID+KCPFTGTVSIRGRIL+GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPA
Sbjct: 51 EGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 132
H+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M
Sbjct: 111 HVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
>sp|P25460|RS11_MAIZE 40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1
Length = 159
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/108 (93%), Positives = 104/108 (96%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GTYIDKKCPFTGTVSIRGRI+AGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA
Sbjct: 51 EGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 110
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 131
HISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA
Sbjct: 111 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
>sp|P42756|RS11_DUNTE 40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2
SV=1
Length = 157
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 94/110 (85%), Gaps = 3/110 (2%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
G Y+DKKCPFTG VSIRGRIL G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPA
Sbjct: 50 DGNYVDKKCPFTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPA 109
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFTAM 132
H+SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+
Sbjct: 110 HVSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFSGF 157
>sp|Q54S90|RS11_DICDI 40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=1
SV=1
Length = 155
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 84/108 (77%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFT VSIRG IL GT S KM RT++VRRNYLH++KKY R+EKRHSNI
Sbjct: 48 AIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNI 107
Query: 82 PAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
PAH+SP F VKEGD V IGQCRPLSKTVRFNV+K + +S KAF
Sbjct: 108 PAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
>sp|P0CX48|RS11B_YEAST 40S ribosomal protein S11-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11B PE=1 SV=1
Length = 156
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
G+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+
Sbjct: 48 AIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNV 107
Query: 82 PAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 108 PVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P0CX47|RS11A_YEAST 40S ribosomal protein S11-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11A PE=1 SV=1
Length = 156
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
G+YIDKKCPFTG VSIRG+IL GT S KM+RTI++RR YLH++ KY RYEKRH N+
Sbjct: 48 AIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNV 107
Query: 82 PAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F
Sbjct: 108 PVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
>sp|P79013|RS11_SCHPO 40S ribosomal protein S11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps11a PE=2 SV=2
Length = 152
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 77/93 (82%)
Query: 25 GTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAH 84
G Y+DKKCPF G VSIRGRIL GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH
Sbjct: 48 GEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAH 107
Query: 85 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+
Sbjct: 108 VSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140
>sp|P41115|RS11_XENLA 40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1
Length = 158
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62282|RS11_RAT 40S ribosomal protein S11 OS=Rattus norvegicus GN=Rps11 PE=1 SV=3
Length = 158
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62281|RS11_MOUSE 40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3
Length = 158
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P61270|RS11_MACFA 40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3
Length = 158
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P62280|RS11_HUMAN 40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3
Length = 158
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q3T0V4|RS11_BOVIN 40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3
Length = 158
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|P52812|RS11_ANOGA 40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2
Length = 153
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 85/110 (77%), Gaps = 4/110 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
+GTYIDKKCPFTG +SIRGRIL G KM+RTI++RR+YLHF++KY R+EKRH N+
Sbjct: 45 AITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNM 104
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 130
H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV G+KK F+
Sbjct: 105 SVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151
>sp|Q9XSU4|RS11_CANFA 40S ribosomal protein S11 OS=Canis familiaris GN=RPS11 PE=1 SV=2
Length = 158
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCPFTG VSIRGRIL+G KM RTI++RR+YLH+++KY R+EKRH N+
Sbjct: 50 AIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNM 109
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H+SPCFR V GD V +G+CRPLSKTVRFNVLKV A G KK F
Sbjct: 110 SVHLSPCFRDVHIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
>sp|Q6XHX5|RS11_DROYA 40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1
Length = 155
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+
Sbjct: 47 AIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNM 106
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 107 SVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q0E9B6|RS11_DROME 40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=1
SV=1
Length = 155
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCP+TG V IRGRIL G AKM RTI++RR+YLHFV+KY R+EKRH N+
Sbjct: 47 AIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNM 106
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 107 SVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152
>sp|Q292D0|RS11_DROPS 40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura
GN=RpS11 PE=3 SV=2
Length = 155
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
Query: 22 CFSGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNI 81
GTYIDKKCP+TG V IRGRIL G KM RTI++RR+YLHFV+KY R+EKRH N+
Sbjct: 47 AIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNM 106
Query: 82 PAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 129
H SP FR V+ GD V IG+CRPLSKTVRFNVLKV GAKK+F
Sbjct: 107 SVHCSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152
>sp|Q2FT32|RS17_METHJ 30S ribosomal protein S17P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps17p PE=3 SV=1
Length = 108
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+ +RG+++ G S KM +++V+R+YLHFV+KYQRYEKR S I AH PC
Sbjct: 18 DVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHFVRKYQRYEKRSSKIHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
+ GD V I +CRPLSKT + V++V
Sbjct: 78 LHARVGDMVSIAECRPLSKTKTYVVVEV 105
>sp|Q0W1X9|RS17_UNCMA 30S ribosomal protein S17P OS=Uncultured methanogenic archaeon RC-I
GN=rps17p PE=3 SV=1
Length = 111
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D +CPF G++++RG+I GT SAKM+++++V R YL KY RYEKR S + AH PC
Sbjct: 18 DPQCPFHGSLAVRGQIFEGTVVSAKMSKSVVVSREYLKRDLKYDRYEKRRSKLHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
KEGD V+I +CRPLSKT F V++V
Sbjct: 78 INAKEGDKVVIAECRPLSKTKTFVVVEV 105
>sp|A2SPL1|RS17_METLZ 30S ribosomal protein S17P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps17p PE=3 SV=1
Length = 108
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G++ +RG+++ G S +M T++V RN+LH V+KY RYEKR S I AH++PC
Sbjct: 18 DVNCPFHGSLPVRGQVITGKVVSERMQGTVVVERNFLHKVQKYDRYEKRSSKIHAHMAPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
K GD V I +CRPL+KT + V++VI
Sbjct: 78 LNAKIGDEVKIAECRPLNKTTSYVVVEVI 106
>sp|Q8TW21|RS17_METKA 30S ribosomal protein S17P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17p PE=3 SV=1
Length = 118
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G + +RG IL G S +M++T+IV R Y + +KY+R+E+R S IPAH PC
Sbjct: 24 DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYRYDRKYERWERRRSRIPAHNPPC 83
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
+EGD V I +CRPLSKT F V++V+
Sbjct: 84 IDAQEGDKVRIAECRPLSKTKSFVVIEVL 112
>sp|A3CT06|RS17_METMJ 30S ribosomal protein S17P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps17p PE=3 SV=1
Length = 108
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+ +RG+++ G S +MN T++V R +LH+VKKY+RYEKR S AH +PC
Sbjct: 18 DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFLHYVKKYKRYEKRRSRYHAHSTPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
GD V I +CRPLSKT F V++V+
Sbjct: 78 INAGVGDVVRIAECRPLSKTTNFVVVEVM 106
>sp|B8GKE2|RS17_METPE 30S ribosomal protein S17P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps17p PE=3 SV=1
Length = 108
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 63/88 (71%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G +S+RG+++ G S +M TI+V R+YLH+V+KY+RYEKR S + AH PC
Sbjct: 18 DVNCPFHGNLSVRGQVITGKVVSDRMLGTIVVGRDYLHYVRKYKRYEKRSSKLHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
+VK GD V I +CRP+SK+ F V++V
Sbjct: 78 LQVKVGDIVKIAECRPISKSTTFVVVEV 105
>sp|Q46GA4|RS17_METBF 30S ribosomal protein S17P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps17p PE=3 SV=1
Length = 109
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+S+RG+IL GT S+KM+ T+++ R Y+ V KYQRYEKR S + AH PC
Sbjct: 18 DSYCPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKLVPKYQRYEKRRSKVHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
K GD V I +CR +SKT + V+K
Sbjct: 78 ISAKVGDIVTIAECRRISKTKSYVVVK 104
>sp|Q8TRT8|RS17_METAC 30S ribosomal protein S17P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps17p PE=3
SV=1
Length = 109
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+ +RG+IL GT S+KM+ T+++ R Y+ V KYQRYEKR S I AH C
Sbjct: 18 DAYCPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVSKYQRYEKRRSKIHAHNPAC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
K GD V I +CRP+SKT + V+K
Sbjct: 78 ISAKVGDIVTIAECRPISKTKSYVVVK 104
>sp|Q8PV41|RS17_METMA 30S ribosomal protein S17P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps17p PE=3 SV=2
Length = 109
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 58/87 (66%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+ +RG+IL GT S+KM+ T+++ R Y+ V KYQRYEKR S I AH C
Sbjct: 18 DAYCPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVSKYQRYEKRRSKIHAHNPAC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
K GD V I +CRP+SKT F V+K
Sbjct: 78 ISAKVGDIVTIVECRPISKTKSFVVVK 104
>sp|O24786|RS17_HALSA 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps17p PE=3 SV=1
Length = 109
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GT D+ CPF G +S+RG++L G S M +T++V R Y FV KY RY KR S +PA
Sbjct: 11 EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPKYDRYMKRRSRVPA 70
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 122
H CF + GD V I + RPLSKT V+++ G +
Sbjct: 71 HAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|B0R665|RS17_HALS3 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps17p PE=3 SV=1
Length = 109
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
GT D+ CPF G +S+RG++L G S M +T++V R Y FV KY RY KR S +PA
Sbjct: 11 EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPKYDRYMKRRSRVPA 70
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS 122
H CF + GD V I + RPLSKT V+++ G +
Sbjct: 71 HAPECFDISVGDTVSIAETRPLSKTKSHVVVEITDGGDA 109
>sp|A7I5P8|RS17_METB6 30S ribosomal protein S17P OS=Methanoregula boonei (strain 6A8)
GN=rps17p PE=3 SV=1
Length = 108
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+ +RG+++ G S KM T++V R+YLH+V+KY RYEKR S + AH PC
Sbjct: 18 DVNCPFHGTLPVRGQVITGKVVSDKMMGTVVVARDYLHYVRKYNRYEKRISKLHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
+ K GD V I +CRPLSK+ + V++V
Sbjct: 78 IQAKVGDLVKIAECRPLSKSTTYVVVEV 105
>sp|O26120|RS17_METTH 30S ribosomal protein S17P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17p PE=3 SV=1
Length = 106
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G + +RG+IL GT S K RT+ V R++ F++KY+RYEKR S I AH C
Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
V+ GD V I +CRPLSKT F V++V
Sbjct: 75 IDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>sp|Q9UX98|RS17_SULSO 30S ribosomal protein S17P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps17p PE=3 SV=1
Length = 114
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D+ CP+ G++ +RG L G + + ++ R YL++ KY+RYE+R S I AH+ PC
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVL 114
V+EGD VIIG+CRPLSK++ F VL
Sbjct: 85 INVREGDKVIIGECRPLSKSISFVVL 110
>sp|Q12ZU2|RS17_METBU 30S ribosomal protein S17P OS=Methanococcoides burtonii (strain DSM
6242) GN=rps17p PE=3 SV=1
Length = 109
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G + +RG+I GT SAKM+RT+++++ + KYQRYEKR S I AH PC
Sbjct: 18 DINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKLINKYQRYEKRQSKIHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
K GD V I +CRPLSKT + V+K
Sbjct: 78 IDAKVGDIVTIAECRPLSKTKSYVVVK 104
>sp|Q18GF8|RS17_HALWD 30S ribosomal protein S17P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps17p PE=3 SV=1
Length = 110
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G++S+RG+ L GT S M++T+IV R Y V KY R KR S IPAH PC
Sbjct: 16 DTNCPFHGSLSVRGQTLEGTVASTDMDKTVIVEREYDVRVPKYDRLMKRRSRIPAHAPPC 75
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAK 126
+ EGD V I + RPLSKT V++ I +GGA+
Sbjct: 76 VDLAEGDTVRIAETRPLSKTKSHVVVEQI---DTGGAE 110
>sp|Q4JB49|RS17_SULAC 30S ribosomal protein S17P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rps17p PE=3 SV=1
Length = 114
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
S T D+ CP+ G++ +RG +L G A+ NRT V R Y+ + KY+RYE+R S I
Sbjct: 20 SKTCDDEYCPYHGSLKVRGIVLEGKLIRARANRTGTVEREYIFYDSKYKRYERRRSRIHV 79
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
HI C VKEGD+VIIG+ RP++K++ F +L V
Sbjct: 80 HIPSCLEVKEGDNVIIGESRPIAKSISFVILGV 112
>sp|Q2NFW6|RS17_METST 30S ribosomal protein S17P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps17p PE=3 SV=1
Length = 106
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF G +S+RG+++ GT S K +RTI V R++ ++ K++RYEKR+S I AH C
Sbjct: 15 DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKFERYEKRNSKIKAHKPDC 74
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
VK GD V I +CR LSKT F +++V
Sbjct: 75 LDVKVGDSVKIAECRQLSKTKHFVLVEV 102
>sp|Q975I9|RS17_SULTO 30S ribosomal protein S17P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps17p PE=3 SV=2
Length = 113
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%)
Query: 24 SGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPA 83
S T D CPF G + +RG IL G + +T +V R+YL + KY+RYE+R S I
Sbjct: 20 SKTCDDINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLFYDTKYKRYERRRSRIHV 79
Query: 84 HISPCFRVKEGDHVIIGQCRPLSKTVRFNVL 114
HI PC VKEGD+VII +CRP++K+V F V+
Sbjct: 80 HIPPCLDVKEGDNVIIAECRPIAKSVSFVVI 110
>sp|Q9YF81|RS17_AERPE 30S ribosomal protein S17P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps17p
PE=3 SV=2
Length = 114
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CP+ GT+ +RG +L G A+ R ++V+ YL++ KKY RYE+R I AH+ C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKV 116
VKEGD V+IG+ P+SKTV+F VL V
Sbjct: 84 ISVKEGDVVVIGETMPISKTVKFTVLGV 111
>sp|P12741|RS17_HALMA 30S ribosomal protein S17P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps17p PE=1
SV=3
Length = 112
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%)
Query: 26 TYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHI 85
T D+ CPF G +S+RG+ L G S M +T++V R Y V KY R+ KR S +PAH
Sbjct: 13 TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKYDRFMKRRSRVPAHA 72
Query: 86 SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGA 125
C + GD V I +CRPLSKT V+ V+ G A
Sbjct: 73 PDCLDLAVGDTVTIAECRPLSKTKSHVVVGVVADEQDGDA 112
>sp|O59426|RS17_PYRHO 30S ribosomal protein S17P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps17p PE=3 SV=1
Length = 116
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D KCP+ G + I GR+ G S K +T+ V R Y H++KKY+RYE R S I AH PC
Sbjct: 21 DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLKKYERYELRRSRIHAHNPPC 80
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
K GD V+I + RPLSKT F V+ V+
Sbjct: 81 INAKVGDRVLIAETRPLSKTKHFVVVAVL 109
>sp|Q9V1U5|RS17_PYRAB 30S ribosomal protein S17P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps17p PE=3 SV=2
Length = 113
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D KCP+ G + I GR+ G S K +T+ V R Y H++KKY+RYE R S I AH PC
Sbjct: 18 DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLKKYERYELRRSRIHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
K GD V+I + RPLSKT F V+ V+
Sbjct: 78 INAKVGDRVLIAETRPLSKTKHFVVVAVL 106
>sp|P14042|RS17_METVA 30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p
PE=3 SV=1
Length = 109
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+S+RG+I G K + TI+++R ++ KY+RYEKR +++ AH PC
Sbjct: 17 DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISKYERYEKRTTSLVAHNPPC 76
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
K GD V + +CRP+SKT F V++
Sbjct: 77 INAKTGDVVKVMECRPVSKTKSFVVIE 103
>sp|Q8U008|RS17_PYRFU 30S ribosomal protein S17P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps17p PE=1 SV=1
Length = 113
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 53/89 (59%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D KCP+ G + I GR+ G S K +T+ V R Y ++ KY+RYE R S I AH PC
Sbjct: 18 DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLNKYERYELRRSKIHAHNPPC 77
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
K GD V+I + RPLSKT F V+ V+
Sbjct: 78 INAKVGDKVLIAETRPLSKTKHFVVVAVL 106
>sp|Q6LXE4|RS17_METMP 30S ribosomal protein S17P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rps17p PE=3 SV=1
Length = 109
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D CPF GT+S+RG+I G S K + TI+++R ++ KY+RYEKR +++ AH C
Sbjct: 17 DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISKYERYEKRTTSLVAHNPAC 76
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
+ K GD V + +CRP+SKT F V++
Sbjct: 77 IKAKVGDTVKVMECRPISKTKSFVVIE 103
>sp|Q5JDH9|RS17_PYRKO 30S ribosomal protein S17P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps17p PE=3 SV=1
Length = 114
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D KCP+ G + I GR + G S K +T++V R Y H++KKY+RYE R S + AH C
Sbjct: 17 DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLKKYERYELRKSKVHAHNPEC 76
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLKVI 117
K GD V+I + RP+SKT + V+ V+
Sbjct: 77 INAKVGDKVLIAETRPISKTKSWVVVAVL 105
>sp|Q6L1B8|RS17_PICTO 30S ribosomal protein S17P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps17p
PE=3 SV=1
Length = 106
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 29 DKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 88
D KCPF G + I G+I+ GT S KMN +I+++R +KKY+RYE + S AH+ C
Sbjct: 17 DPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIKKYERYETKISKFHAHLPGC 76
Query: 89 FRVKEGDHVIIGQCRPLSKTVRFNVLK 115
V+ GD V I +CR L+KT+ F V++
Sbjct: 77 IDVRPGDRVKIAECRKLAKTISFVVVE 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,946,181
Number of Sequences: 539616
Number of extensions: 1657580
Number of successful extensions: 5197
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 513
Number of HSP's that attempted gapping in prelim test: 4898
Number of HSP's gapped (non-prelim): 710
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)