Your job contains 1 sequence.
>032859
MAMNQITSLRSFIMVKETVGKVGQRTFAAGASKAKKGGKGAASDAPKASILSKEVKSTTV
VGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDLKRFLKLDNRA
KIKENNSVKAKN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032859
(132 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2082334 - symbol:AT3G01740 "AT3G01740" species... 377 8.3e-35 1
TAIR|locus:2145703 - symbol:AT5G14290 "AT5G14290" species... 323 4.4e-29 1
CGD|CAL0001865 - symbol:MRPL37 species:5476 "Candida albi... 116 3.8e-07 1
UNIPROTKB|Q59VH8 - symbol:MRPL37 "Likely mitochondrial ri... 116 3.8e-07 1
UNIPROTKB|G4MY41 - symbol:MGG_11244 "Uncharacterized prot... 88 4.3e-07 2
FB|FBgn0034579 - symbol:mRpL54 "mitochondrial ribosomal p... 108 2.6e-06 1
SGD|S000000472 - symbol:MRPL37 "Mitochondrial ribosomal p... 102 1.1e-05 1
UNIPROTKB|F1N148 - symbol:MRPL54 "39S ribosomal protein L... 98 3.0e-05 1
ZFIN|ZDB-GENE-050208-381 - symbol:mrpl54 "mitochondrial r... 98 3.0e-05 1
UNIPROTKB|Q3MHJ5 - symbol:MRPL54 "39S ribosomal protein L... 96 5.0e-05 1
UNIPROTKB|Q6P161 - symbol:MRPL54 "39S ribosomal protein L... 95 6.3e-05 1
UNIPROTKB|E2R5X3 - symbol:MRPL54 "Uncharacterized protein... 91 0.00017 1
WB|WBGene00009128 - symbol:mrpl-54 species:6239 "Caenorha... 91 0.00017 1
ASPGD|ASPL0000037531 - symbol:AN2949 species:162425 "Emer... 93 0.00034 1
RGD|1305694 - symbol:Mrpl54 "mitochondrial ribosomal prot... 88 0.00035 1
MGI|MGI:1913297 - symbol:Mrpl54 "mitochondrial ribosomal ... 87 0.00045 1
>TAIR|locus:2082334 [details] [associations]
symbol:AT3G01740 "AT3G01740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005840 EMBL:AC009325 EMBL:AC010797
UniGene:At.3405 InterPro:IPR013870 Pfam:PF08561
ProtClustDB:CLSN2687977 EMBL:AY086215 EMBL:BT003920 EMBL:BT005007
IPI:IPI00530582 RefSeq:NP_566150.1 UniGene:At.41237 STRING:Q9S799
PRIDE:Q9S799 EnsemblPlants:AT3G01740.1 GeneID:821088
KEGG:ath:AT3G01740 TAIR:At3g01740 eggNOG:NOG312278
HOGENOM:HOG000244039 InParanoid:Q9S799 OMA:WLWHLLD PhylomeDB:Q9S799
ArrayExpress:Q9S799 Genevestigator:Q9S799 Uniprot:Q9S799
Length = 126
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 67/82 (81%), Positives = 78/82 (95%)
Query: 51 LSKEVKSTTVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDL 110
L+KE+KSTTVVGAN LK+GSDPK+LPDS+YPDWLWHLL+KRPALSEL+ KN+ETLPY+DL
Sbjct: 45 LTKEIKSTTVVGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDL 104
Query: 111 KRFLKLDNRAKIKENNSVKAKN 132
KRF+KLD R KIKENNS+KAKN
Sbjct: 105 KRFVKLDTRGKIKENNSIKAKN 126
>TAIR|locus:2145703 [details] [associations]
symbol:AT5G14290 "AT5G14290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GO:GO:0005840 InterPro:IPR013870
Pfam:PF08561 EMBL:DQ446949 IPI:IPI00517312 RefSeq:NP_196933.2
UniGene:At.65511 EnsemblPlants:AT5G14290.1 GeneID:831279
KEGG:ath:AT5G14290 TAIR:At5g14290 InParanoid:Q1PDW9 OMA:WGRERTQ
PhylomeDB:Q1PDW9 ProtClustDB:CLSN2687977 Genevestigator:Q1PDW9
Uniprot:Q1PDW9
Length = 132
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 58/82 (70%), Positives = 75/82 (91%)
Query: 51 LSKEVKSTTVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDL 110
LSKE+KS+ VV AN LK+G DPK+LP+S++PD+LWHLL+KRPALSEL+ KN+ETL ++DL
Sbjct: 51 LSKEIKSSMVVSANTLKDGLDPKILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDL 110
Query: 111 KRFLKLDNRAKIKENNSVKAKN 132
KRF+KLD RA+IKEN+S+KAKN
Sbjct: 111 KRFVKLDTRARIKENHSIKAKN 132
>CGD|CAL0001865 [details] [associations]
symbol:MRPL37 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] CGD:CAL0001865 EMBL:AACQ01000123
EMBL:AACQ01000122 eggNOG:NOG115415 InterPro:IPR013870 Pfam:PF08561
RefSeq:XP_713565.1 RefSeq:XP_713600.1 STRING:Q59VH8 GeneID:3644734
GeneID:3644782 KEGG:cal:CaO19.755 KEGG:cal:CaO19.8375
Uniprot:Q59VH8
Length = 120
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 59 TVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDLKRFLKLDN 118
TV+ + K+G +P DSEYP+WLW +L+ + L ++ N + L + +K L +N
Sbjct: 52 TVLNLKVFKKGDEPVAKEDSEYPEWLWTMLDPKDNLKAIQ--NEDFLRWRRIK--LSKEN 107
Query: 119 RAKIKENN 126
+ IK NN
Sbjct: 108 NSTIKNNN 115
>UNIPROTKB|Q59VH8 [details] [associations]
symbol:MRPL37 "Likely mitochondrial ribosome protein
MRPL37p" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] CGD:CAL0001865 EMBL:AACQ01000123
EMBL:AACQ01000122 eggNOG:NOG115415 InterPro:IPR013870 Pfam:PF08561
RefSeq:XP_713565.1 RefSeq:XP_713600.1 STRING:Q59VH8 GeneID:3644734
GeneID:3644782 KEGG:cal:CaO19.755 KEGG:cal:CaO19.8375
Uniprot:Q59VH8
Length = 120
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 59 TVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDLKRFLKLDN 118
TV+ + K+G +P DSEYP+WLW +L+ + L ++ N + L + +K L +N
Sbjct: 52 TVLNLKVFKKGDEPVAKEDSEYPEWLWTMLDPKDNLKAIQ--NEDFLRWRRIK--LSKEN 107
Query: 119 RAKIKENN 126
+ IK NN
Sbjct: 108 NSTIKNNN 115
>UNIPROTKB|G4MY41 [details] [associations]
symbol:MGG_11244 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001232
InterPro:IPR013870 Pfam:PF08561 RefSeq:XP_003714179.1
EnsemblFungi:MGG_11244T0 GeneID:5051212 KEGG:mgr:MGG_11244
Uniprot:G4MY41
Length = 201
Score = 88 (36.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 51 LSKEVKSTTVVGANILKEGSDPKVLPDSEYPDWLWHLL 88
LS K T + G N K+ SDP L D YP WLW L
Sbjct: 61 LSSCPKGTILKGLNYFKDKSDPVALADDAYPAWLWDCL 98
Score = 46 (21.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 108 EDLKRFLKLDNRAKIKENNSVKA 130
E L+ ++ + +AKI+ENN +++
Sbjct: 178 EALRSAMRKERKAKIRENNYLRS 200
>FB|FBgn0034579 [details] [associations]
symbol:mRpL54 "mitochondrial ribosomal protein L54"
species:7227 "Drosophila melanogaster" [GO:0032543 "mitochondrial
translation" evidence=IC] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISS] InterPro:IPR013870 Pfam:PF08561
eggNOG:NOG122198 EMBL:AY069845 STRING:Q8T9B2 PaxDb:Q8T9B2
PRIDE:Q8T9B2 FlyBase:FBgn0034579 InParanoid:Q8T9B2
OrthoDB:EOG466T3H ArrayExpress:Q8T9B2 Bgee:Q8T9B2 Uniprot:Q8T9B2
Length = 132
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 60 VVGANILKEGSDPKVLPDSEYPDWLWHL 87
V G+N LK G D K+ PDSEYPDWLW L
Sbjct: 66 VCGSNYLKTGEDIKIKPDSEYPDWLWTL 93
>SGD|S000000472 [details] [associations]
symbol:MRPL37 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030435 "sporulation resulting in formation of a
cellular spore" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IDA] [GO:0032543 "mitochondrial translation"
evidence=IC] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
SGD:S000000472 EMBL:BK006936 GO:GO:0030435 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:X70529 RefSeq:NP_009827.3
GeneID:852571 KEGG:sce:YBR268W RefSeq:NP_009831.3 GeneID:852575
KEGG:sce:YBR272C eggNOG:NOG115415 OrthoDB:EOG4JQ776
InterPro:IPR013870 Pfam:PF08561 EMBL:Z36137 EMBL:AY692835
PIR:S46149 ProteinModelPortal:P36532 IntAct:P36532
MINT:MINT-2783170 STRING:P36532 PaxDb:P36532 EnsemblFungi:YBR268W
CYGD:YBR268w HOGENOM:HOG000246609 OMA:KSSCKAG NextBio:971697
Genevestigator:P36532 GermOnline:YBR268W Uniprot:P36532
Length = 105
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 59 TVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYEDLKRFLKLDN 118
T + NI K G D L D EYP+WLW +L+ + E ++ E ++ ++ N
Sbjct: 34 TSLNLNIWKSGKDAVALEDKEYPNWLWSVLDSDHVV-EHAAEDPEGQALLKRRKNIRKAN 92
Query: 119 RAKIKENN 126
R +IK+NN
Sbjct: 93 RQRIKQNN 100
>UNIPROTKB|F1N148 [details] [associations]
symbol:MRPL54 "39S ribosomal protein L54, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 InterPro:IPR013870 Pfam:PF08561 IPI:IPI00703263
UniGene:Bt.30696 GeneTree:ENSGT00390000001201 OMA:WLFEMNL
EMBL:DAAA02019635 Ensembl:ENSBTAT00000011049 Uniprot:F1N148
Length = 138
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 50 ILSKEVKSTT-VVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYE 108
+ + V+ TT +G NI KEG D + PDSEYP+WL+ + P +L+ + ET Y
Sbjct: 61 VCTDPVQLTTHAMGVNIYKEGQDVVLKPDSEYPEWLFQMNVGPP--KKLEELDPETREYW 118
Query: 109 DLKRFLKLDNRAKIKEN 125
L R + ++ +N
Sbjct: 119 RLLRKHNIWRHNRLSKN 135
>ZFIN|ZDB-GENE-050208-381 [details] [associations]
symbol:mrpl54 "mitochondrial ribosomal protein L54"
species:7955 "Danio rerio" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] ZFIN:ZDB-GENE-050208-381 GO:GO:0005739
GO:GO:0005840 InterPro:IPR013870 Pfam:PF08561 CTD:116541
eggNOG:NOG122198 HOGENOM:HOG000068097 EMBL:BX323550 IPI:IPI00760288
RefSeq:XP_003201071.1 UniGene:Dr.85533 Ensembl:ENSDART00000105692
GeneID:100034614 KEGG:dre:100034614 GeneTree:ENSGT00390000001201
HOVERGEN:HBG105523 InParanoid:Q1LXI5 OrthoDB:EOG4ZCT5T
NextBio:20788393 Bgee:Q1LXI5 Uniprot:Q1LXI5
Length = 135
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 58 TTVVGANILKEGSDPKVLPDSEYPDWLWHL-LEKRPALSELKMKNIE---TLPYEDLKRF 113
T VG N+ K+G DP + P EYP+WL+ L L L+EL+ + E + E + R
Sbjct: 67 TYAVGVNVFKQGEDPTIKPKDEYPEWLFQLNLGPVKQLNELEPDSWEYWRRIRKEHIWRH 126
Query: 114 LKLDNRAK 121
KL N+ K
Sbjct: 127 NKL-NKGK 133
>UNIPROTKB|Q3MHJ5 [details] [associations]
symbol:MRPL54 "39S ribosomal protein L54, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] GO:GO:0005739 GO:GO:0005840
InterPro:IPR013870 Pfam:PF08561 EMBL:BC105215 IPI:IPI00703263
RefSeq:NP_001030277.1 UniGene:Bt.30696 PRIDE:Q3MHJ5 GeneID:511926
KEGG:bta:511926 CTD:116541 eggNOG:NOG122198 HOGENOM:HOG000068097
HOVERGEN:HBG093903 NextBio:20870165 Uniprot:Q3MHJ5
Length = 138
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 50 ILSKEVKSTT-VVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIETLPYE 108
+ + V+ TT +G NI KEG D + PDSEYP+WL+ + P +L+ + ET Y
Sbjct: 61 VCTDPVQLTTHPMGVNIYKEGQDVVLKPDSEYPEWLFQMNVGPP--KKLEELDPETREYW 118
Query: 109 DLKRFLKLDNRAKIKEN 125
L R + ++ +N
Sbjct: 119 RLLRKHNIWRHNRLSKN 135
>UNIPROTKB|Q6P161 [details] [associations]
symbol:MRPL54 "39S ribosomal protein L54, mitochondrial"
species:9606 "Homo sapiens" [GO:0005840 "ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0005840 InterPro:IPR013870 Pfam:PF08561 CTD:116541
eggNOG:NOG122198 HOGENOM:HOG000068097 HOVERGEN:HBG093903
OrthoDB:EOG4ZCT5T EMBL:BC065273 IPI:IPI00332157 RefSeq:NP_758455.1
UniGene:Hs.356578 ProteinModelPortal:Q6P161 STRING:Q6P161
PhosphoSite:Q6P161 DMDM:74737109 PaxDb:Q6P161 PRIDE:Q6P161
DNASU:116541 Ensembl:ENST00000330133 GeneID:116541 KEGG:hsa:116541
UCSC:uc002lyq.4 GeneCards:GC19P003713 HGNC:HGNC:16685 MIM:611858
neXtProt:NX_Q6P161 PharmGKB:PA30987 InParanoid:Q6P161 OMA:WLFEMNL
PhylomeDB:Q6P161 GenomeRNAi:116541 NextBio:79975 Bgee:Q6P161
CleanEx:HS_MRPL54 Genevestigator:Q6P161 Uniprot:Q6P161
Length = 138
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 50 ILSKEVKSTT-VVGANILKEGSDPKVLPDSEYPDWLWHL-LEKRPALSELKMKNIE 103
+ + V+ TT +G NI KEG D + PD+EYP+WL+ + L L EL ++ E
Sbjct: 61 VCTDPVQLTTYAMGVNIYKEGQDVPLKPDAEYPEWLFEMNLGPPKTLEELDPESRE 116
>UNIPROTKB|E2R5X3 [details] [associations]
symbol:MRPL54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 InterPro:IPR013870 Pfam:PF08561 CTD:116541
GeneTree:ENSGT00390000001201 OMA:WLFEMNL EMBL:AAEX03012573
RefSeq:XP_542170.3 Ensembl:ENSCAFT00000030464 GeneID:485052
KEGG:cfa:485052 NextBio:20859117 Uniprot:E2R5X3
Length = 138
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 50 ILSKEVKSTT-VVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPA-LSELKMKNIE 103
+ + V+ TT +G NI K+G D + PD+EYP+WL+ + P L EL ++ E
Sbjct: 61 VCTDPVRLTTHAMGVNIYKDGQDVVLKPDAEYPEWLFQMNVGPPKKLEELDPESRE 116
>WB|WBGene00009128 [details] [associations]
symbol:mrpl-54 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 EMBL:Z81068
InterPro:IPR013870 Pfam:PF08561 eggNOG:NOG122198
GeneTree:ENSGT00390000001201 PIR:T21364 RefSeq:NP_492455.1
DIP:DIP-24376N MINT:MINT-1042414 STRING:O17839 PaxDb:O17839
EnsemblMetazoa:F25H5.6.1 EnsemblMetazoa:F25H5.6.2 GeneID:172741
KEGG:cel:CELE_F25H5.6 UCSC:F25H5.6.2 CTD:172741 WormBase:F25H5.6
InParanoid:O17839 OMA:YPEWLFK NextBio:876819 Uniprot:O17839
Length = 133
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 55 VKSTTVVGANILKEGSDP--KVLPDSEYPDWLWHLLEKRPA-LSELKMKNIETLPYEDL- 110
VK T V N +G +P K+LPDSEYP+WL+ L + P L +L + L + L
Sbjct: 45 VKLATHVCINAYTQGDEPGPKILPDSEYPEWLFKLDLRAPRDLEDLDAEKDGWLYWRALR 104
Query: 111 KRFLKLDNRA-KIK 123
KR ++ + R K+K
Sbjct: 105 KRQVEQNQRIQKLK 118
>ASPGD|ASPL0000037531 [details] [associations]
symbol:AN2949 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001306 EMBL:AACD01000051 eggNOG:NOG115415
OrthoDB:EOG4JQ776 InterPro:IPR013870 Pfam:PF08561
RefSeq:XP_660553.1 EnsemblFungi:CADANIAT00010135 GeneID:2873906
KEGG:ani:AN2949.2 HOGENOM:HOG000195149 OMA:FSKSKKQ Uniprot:Q5B931
Length = 236
Score = 93 (37.8 bits), Expect = 0.00034, P = 0.00034
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 58 TTVVGANILKEGSDPKVLPDSEYPDWLWHLLEKRPALSELKMKNIE--TLPYEDLKRFLK 115
T + G N K + L DSEYPDWLW LL+ E K ++ TL + KR+ K
Sbjct: 107 TPLAGLNYFKNKPEVVALEDSEYPDWLWSLLDSTN--KEAKKGGVDPSTLNKKQRKRYEK 164
>RGD|1305694 [details] [associations]
symbol:Mrpl54 "mitochondrial ribosomal protein L54"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] RGD:1305694
GO:GO:0005739 GO:GO:0005840 EMBL:CH474029 InterPro:IPR013870
Pfam:PF08561 CTD:116541 GeneTree:ENSGT00390000001201
OrthoDB:EOG4ZCT5T OMA:WLFEMNL IPI:IPI00205110 RefSeq:NP_001100240.1
UniGene:Rn.20606 Ensembl:ENSRNOT00000027737 GeneID:299628
KEGG:rno:299628 UCSC:RGD:1305694 NextBio:645549 Uniprot:D3Z9K2
Length = 135
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 57 STTVVGANILKEGSDPKVLPDSEYPDWLWHL-LEKRPALSELKMKNIE---TLPYEDLKR 112
+T +G NI KEG + + PDSEYP WL+ + L L +L+ ++ E L +++ R
Sbjct: 66 TTHAMGVNIYKEGQEVALKPDSEYPTWLFQVDLGPPKKLEDLEPESREYWRLLRKQNIWR 125
Query: 113 FLKLDNRAKI 122
+L K+
Sbjct: 126 HNRLSKNKKL 135
>MGI|MGI:1913297 [details] [associations]
symbol:Mrpl54 "mitochondrial ribosomal protein L54"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
MGI:MGI:1913297 GO:GO:0005739 GO:GO:0005840 InterPro:IPR013870
Pfam:PF08561 CTD:116541 eggNOG:NOG122198 HOGENOM:HOG000068097
HOVERGEN:HBG093903 GeneTree:ENSGT00390000001201 OrthoDB:EOG4ZCT5T
OMA:WLFEMNL EMBL:AK003225 EMBL:AK009657 EMBL:BC056985
IPI:IPI00132091 RefSeq:NP_079593.1 UniGene:Mm.43397
PhosphoSite:Q9CPW3 PaxDb:Q9CPW3 PRIDE:Q9CPW3
Ensembl:ENSMUST00000046114 GeneID:66047 KEGG:mmu:66047
UCSC:uc007ggy.1 InParanoid:Q9CPW3 NextBio:320466 Bgee:Q9CPW3
CleanEx:MM_MRPL54 Genevestigator:Q9CPW3 Uniprot:Q9CPW3
Length = 135
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 57 STTVVGANILKEGSDPKVLPDSEYPDWLWHL-LEKRPALSELKMKNIE---TLPYEDLKR 112
+T +G NI KEG D + DSEYP WL+ + L L EL+ ++ E L +++ R
Sbjct: 66 TTHAMGVNIYKEGQDVALKADSEYPTWLFQVNLGPPKKLEELEPESREYWRLLRKQNIWR 125
Query: 113 FLKLDNRAKI 122
+L K+
Sbjct: 126 HNRLSKNKKL 135
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 110 0.00091 102 3 11 23 0.49 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 505 (54 KB)
Total size of DFA: 103 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.12u 0.12s 11.24t Elapsed: 00:00:01
Total cpu time: 11.12u 0.12s 11.24t Elapsed: 00:00:01
Start: Fri May 10 06:10:02 2013 End: Fri May 10 06:10:03 2013