BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032868
MEATSLISLSSFAAGASSLPPVLCPHGNNRRGLLSLTVDQQRCDNIGFISSKILSFCPKA
SLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMDDKEPEI
CGGSIDSFSKT

High Scoring Gene Products

Symbol, full name Information P value
SEN1
AT4G35770
protein from Arabidopsis thaliana 2.9e-16
NRIP1
Chloroplast N receptor-interacting protein 1
protein from Nicotiana benthamiana 6.0e-16
STR16
AT5G66040
protein from Arabidopsis thaliana 1.1e-14
STR18
AT5G66170
protein from Arabidopsis thaliana 2.3e-07
AT2G21045 protein from Arabidopsis thaliana 6.1e-07
SO_3105
Periplasmic rhodanese domain protein
protein from Shewanella oneidensis MR-1 5.5e-06
SO_3105
phage shock protein E
protein from Shewanella oneidensis MR-1 5.5e-06
SO_4394
Cytoplasmic rhodanese domain protein
protein from Shewanella oneidensis MR-1 6.3e-05
SO_4394
phage shock protein E
protein from Shewanella oneidensis MR-1 6.3e-05
AT2G17850 protein from Arabidopsis thaliana 6.3e-05
MCA1816
Sulfurtransferase
protein from Methylococcus capsulatus str. Bath 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032868
        (131 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2128038 - symbol:SEN1 "AT4G35770" species:3702...   202  2.9e-16   1
UNIPROTKB|B2C7Y6 - symbol:NRIP1 "Chloroplast N receptor-i...   199  6.0e-16   1
TAIR|locus:2156937 - symbol:STR16 "AT5G66040" species:370...   187  1.1e-14   1
TAIR|locus:2156882 - symbol:STR18 "AT5G66170" species:370...   118  2.3e-07   1
TAIR|locus:505006261 - symbol:AT2G21045 species:3702 "Ara...   114  6.1e-07   1
UNIPROTKB|Q8ECN1 - symbol:SO_3105 "Periplasmic rhodanese ...   105  5.5e-06   1
TIGR_CMR|SO_3105 - symbol:SO_3105 "phage shock protein E"...   105  5.5e-06   1
UNIPROTKB|Q8E992 - symbol:SO_4394 "Cytoplasmic rhodanese ...    95  6.3e-05   1
TIGR_CMR|SO_4394 - symbol:SO_4394 "phage shock protein E"...    95  6.3e-05   1
TAIR|locus:2827795 - symbol:AT2G17850 "AT2G17850" species...    95  6.3e-05   1
UNIPROTKB|Q607E4 - symbol:MCA1816 "Sulfurtransferase" spe...    85  0.00072   1


>TAIR|locus:2128038 [details] [associations]
            symbol:SEN1 "AT4G35770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=IEP;ISS] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0006979 "response to oxidative stress"
            evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
            [GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
            [GO:0009744 "response to sucrose stimulus" evidence=RCA]
            [GO:0009750 "response to fructose stimulus" evidence=RCA]
            PROSITE:PS00380 PROSITE:PS00683 Pfam:PF00581 GO:GO:0009507
            EMBL:CP002687 GO:GO:0009753 GO:GO:0006979 GO:GO:0009611
            GO:GO:0007568 EMBL:AL161588 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0009579
            EMBL:AL031135 EMBL:U26944 EMBL:U26945 EMBL:AY078973 EMBL:AY091671
            EMBL:AY085192 IPI:IPI00534149 PIR:T04682 RefSeq:NP_001078496.1
            RefSeq:NP_195302.1 UniGene:At.24896 UniGene:At.67197
            ProteinModelPortal:Q38853 SMR:Q38853 IntAct:Q38853 STRING:Q38853
            PRIDE:Q38853 EnsemblPlants:AT4G35770.1 GeneID:829730
            KEGG:ath:AT4G35770 TAIR:At4g35770 HOGENOM:HOG000015173
            InParanoid:Q38853 OMA:NTTSRIG PhylomeDB:Q38853
            ProtClustDB:CLSN2685305 BRENDA:2.8.1.1 Genevestigator:Q38853
            Uniprot:Q38853
        Length = 182

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 41/53 (77%), Positives = 45/53 (84%)

Query:    63 RGNL--EAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
             RGN+  EAV +PTSVPVRVA EL QAG+RYLDVRTP+EFS GH T AINVPYM
Sbjct:    59 RGNVAAEAVKIPTSVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRAINVPYM 111


>UNIPROTKB|B2C7Y6 [details] [associations]
            symbol:NRIP1 "Chloroplast N receptor-interacting protein 1"
            species:4100 "Nicotiana benthamiana" [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF00581 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 EMBL:EU332890
            EMBL:EU332891 SMR:B2C7Y6 IntAct:B2C7Y6 Uniprot:B2C7Y6
        Length = 185

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/73 (60%), Positives = 52/73 (71%)

Query:    41 QRCDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFS 100
             Q+  N G  S++   F   A++   ++   VPTSVPVRVA ELLQAGHRYLDVRT EEFS
Sbjct:    43 QKRRNFGN-SNRTPGFSWMATVGEKVQVSTVPTSVPVRVALELLQAGHRYLDVRTAEEFS 101

Query:   101 AGHATGAINVPYM 113
              GHA GAIN+PYM
Sbjct:   102 DGHAPGAINIPYM 114


>TAIR|locus:2156937 [details] [associations]
            symbol:STR16 "AT5G66040" species:3702 "Arabidopsis
            thaliana" [GO:0007568 "aging" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0004792 "thiosulfate
            sulfurtransferase activity" evidence=IDA] [GO:0006569 "tryptophan
            catabolic process" evidence=RCA] [GO:0009684 "indoleacetic acid
            biosynthetic process" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
            Pfam:PF00581 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 EMBL:AB011474 eggNOG:COG0607 HOGENOM:HOG000247776
            GO:GO:0004792 BRENDA:2.8.1.1 EMBL:X89036 EMBL:AY049302
            EMBL:BT000864 EMBL:AY084763 IPI:IPI00531957 PIR:S58275
            RefSeq:NP_851278.1 UniGene:At.23333 PDB:1TQ1 PDBsum:1TQ1
            ProteinModelPortal:Q39129 SMR:Q39129 STRING:Q39129 PaxDb:Q39129
            PRIDE:Q39129 EnsemblPlants:AT5G66040.1 GeneID:836734
            KEGG:ath:AT5G66040 GeneFarm:4731 TAIR:At5g66040 InParanoid:Q39129
            OMA:CGAINVP PhylomeDB:Q39129 SABIO-RK:Q39129
            EvolutionaryTrace:Q39129 Genevestigator:Q39129 Uniprot:Q39129
        Length = 120

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 36/44 (81%), Positives = 39/44 (88%)

Query:    71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMD 114
             VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM+
Sbjct:     7 VPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMN 50


>TAIR|locus:2156882 [details] [associations]
            symbol:STR18 "AT5G66170" species:3702 "Arabidopsis
            thaliana" [GO:0007568 "aging" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0004792 "thiosulfate
            sulfurtransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] Pfam:PF00581 GO:GO:0005737 EMBL:CP002688
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0004792 IPI:IPI00657087 RefSeq:NP_001032159.1
            UniGene:At.24500 ProteinModelPortal:F4JZ39 SMR:F4JZ39 PRIDE:F4JZ39
            EnsemblPlants:AT5G66170.2 GeneID:836749 KEGG:ath:AT5G66170
            OMA:CEAAKIV PhylomeDB:F4JZ39 Uniprot:F4JZ39
        Length = 138

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query:    61 SLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGA--INVPYM 113
             S+  + +A  V  SV V  A  LLQ+GH+YLDVRT +EF  GH   A  +N+PYM
Sbjct:     4 SISSSTKAEEV-VSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYM 57


>TAIR|locus:505006261 [details] [associations]
            symbol:AT2G21045 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0007568 "aging"
            evidence=ISS;TAS] [GO:0000041 "transition metal ion transport"
            evidence=RCA] [GO:0006826 "iron ion transport" evidence=RCA]
            [GO:0010106 "cellular response to iron ion starvation"
            evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
            [GO:0010359 "regulation of anion channel activity" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] [GO:0048767 "root
            hair elongation" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
            Pfam:PF00581 GO:GO:0005739 EMBL:CP002685 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            EMBL:AC006234 EMBL:AC006264 HOGENOM:HOG000247776 EMBL:AK227791
            EMBL:BT008306 IPI:IPI00536036 RefSeq:NP_565497.3 UniGene:At.39614
            ProteinModelPortal:Q8RUD6 SMR:Q8RUD6 PRIDE:Q8RUD6
            EnsemblPlants:AT2G21045.1 GeneID:816639 KEGG:ath:AT2G21045
            TAIR:At2g21045 InParanoid:Q8RUD6 OMA:RTNEEFA PhylomeDB:Q8RUD6
            ProtClustDB:CLSN2681696 Genevestigator:Q8RUD6 Uniprot:Q8RUD6
        Length = 169

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 22/40 (55%), Positives = 26/40 (65%)

Query:    74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYM 113
             +V V  A   L  GHRYLDVRT EEF+  H   A+N+PYM
Sbjct:    43 TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYM 82


>UNIPROTKB|Q8ECN1 [details] [associations]
            symbol:SO_3105 "Periplasmic rhodanese domain protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] Pfam:PF00581 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 HOGENOM:HOG000247776
            KO:K03972 HSSP:P09390 RefSeq:NP_718667.1 ProteinModelPortal:Q8ECN1
            GeneID:1170794 KEGG:son:SO_3105 PATRIC:23525854 OMA:AWDKIAA
            ProtClustDB:CLSK907002 Uniprot:Q8ECN1
        Length = 132

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query:    78 RVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPY 112
             +VA E + +G   LDVRTPEEF+AGH   A+N+P+
Sbjct:    38 QVAWEKIASGAMVLDVRTPEEFAAGHLVNAVNIPF 72


>TIGR_CMR|SO_3105 [details] [associations]
            symbol:SO_3105 "phage shock protein E" species:211586
            "Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0009271 "phage shock" evidence=ISS] Pfam:PF00581
            EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            HOGENOM:HOG000247776 KO:K03972 HSSP:P09390 RefSeq:NP_718667.1
            ProteinModelPortal:Q8ECN1 GeneID:1170794 KEGG:son:SO_3105
            PATRIC:23525854 OMA:AWDKIAA ProtClustDB:CLSK907002 Uniprot:Q8ECN1
        Length = 132

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query:    78 RVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPY 112
             +VA E + +G   LDVRTPEEF+AGH   A+N+P+
Sbjct:    38 QVAWEKIASGAMVLDVRTPEEFAAGHLVNAVNIPF 72


>UNIPROTKB|Q8E992 [details] [associations]
            symbol:SO_4394 "Cytoplasmic rhodanese domain protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] Pfam:PF00581 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 HOGENOM:HOG000247776
            RefSeq:NP_719917.1 ProteinModelPortal:Q8E992 GeneID:1171994
            KEGG:son:SO_4394 PATRIC:23528445 OMA:IRNGAFL ProtClustDB:CLSK907624
            Uniprot:Q8E992
        Length = 108

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/30 (56%), Positives = 24/30 (80%)

Query:    82 ELLQAGHRYLDVRTPEEFSAGHATGAINVP 111
             +L++ G R +DVR+PEEF++GH   AINVP
Sbjct:    20 QLIEQGARVIDVRSPEEFASGHLPQAINVP 49


>TIGR_CMR|SO_4394 [details] [associations]
            symbol:SO_4394 "phage shock protein E" species:211586
            "Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0009271 "phage shock" evidence=ISS] Pfam:PF00581
            EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            HOGENOM:HOG000247776 RefSeq:NP_719917.1 ProteinModelPortal:Q8E992
            GeneID:1171994 KEGG:son:SO_4394 PATRIC:23528445 OMA:IRNGAFL
            ProtClustDB:CLSK907624 Uniprot:Q8E992
        Length = 108

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/30 (56%), Positives = 24/30 (80%)

Query:    82 ELLQAGHRYLDVRTPEEFSAGHATGAINVP 111
             +L++ G R +DVR+PEEF++GH   AINVP
Sbjct:    20 QLIEQGARVIDVRSPEEFASGHLPQAINVP 49


>TAIR|locus:2827795 [details] [associations]
            symbol:AT2G17850 "AT2G17850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0001666 "response to hypoxia" evidence=RCA] [GO:0009862
            "systemic acquired resistance, salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0010089 "xylem development"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0044036 "cell wall
            macromolecule metabolic process" evidence=RCA] PROSITE:PS00380
            PROSITE:PS00683 Pfam:PF00581 EMBL:CP002685 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            IPI:IPI00539448 RefSeq:NP_565426.2 UniGene:At.52790
            ProteinModelPortal:F4IPI4 SMR:F4IPI4 PRIDE:F4IPI4
            EnsemblPlants:AT2G17850.1 GeneID:816295 KEGG:ath:AT2G17850
            TAIR:At2g17850 OMA:SHIKGAT Uniprot:F4IPI4
        Length = 156

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    44 DNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRV--AHELLQAGHRYLDVRTPEEFSA 101
             D++  + S +L F     L     ++  P  + + V  A +LL +G+ +LDVRT EEF  
Sbjct:     2 DSLHVLRSFLLLFIVFNHLPRTTTSMSEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKK 61

Query:   102 GH--ATGAINVPY 112
             GH  +    NVPY
Sbjct:    62 GHVDSENVFNVPY 74


>UNIPROTKB|Q607E4 [details] [associations]
            symbol:MCA1816 "Sulfurtransferase" species:243233
            "Methylococcus capsulatus str. Bath" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001307 PROSITE:PS00380 Pfam:PF00581
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 EMBL:AE017282 GenomeReviews:AE017282_GR
            HOGENOM:HOG000247776 GO:GO:0004792 RefSeq:YP_114254.1
            ProteinModelPortal:Q607E4 GeneID:3104076 KEGG:mca:MCA1816
            PATRIC:22607478 OMA:GGAVEQP Uniprot:Q607E4
        Length = 120

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query:    91 LDVRTPEEFSAGHATGAINVP 111
             LDVR PEE++AGH  GAIN+P
Sbjct:    34 LDVREPEEYAAGHLPGAINIP 54


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      131       116   0.00091  102 3  11 22  0.36    31
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  11
  No. of states in DFA:  550 (59 KB)
  Total size of DFA:  118 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.49u 0.25s 9.74t   Elapsed:  00:00:01
  Total cpu time:  9.49u 0.25s 9.74t   Elapsed:  00:00:01
  Start:  Fri May 10 06:24:19 2013   End:  Fri May 10 06:24:20 2013

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