BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032868
         (131 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1TQ1|A Chain A, Solution Structure Of At5g66040, A Putative Protein From
           Arabidosis Thaliana
          Length = 129

 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 39/44 (88%)

Query: 71  VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMD 114
           VP+SV V VAH+LL AGHRYLDVRTPEEFS GHA GAINVPYM+
Sbjct: 16  VPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMN 59


>pdb|2JTQ|A Chain A, Rhodanese From E.Coli
 pdb|2JTR|A Chain A, Rhodanese Persulfide From E. Coli
 pdb|2JTS|A Chain A, Rhodanese With Anions From E. Coli
          Length = 85

 Score = 35.8 bits (81), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 90  YLDVRTPEEFSAGHATGAINVPYMDDKE 117
           ++DVR PE++   H  GAIN+P  + KE
Sbjct: 4   WIDVRVPEQYQQEHVQGAINIPLKEVKE 31


>pdb|1YT8|A Chain A, Crystal Structure Of Thiosulfate Sulfurtransferase From
           Pseudomonas Aeruginosa
          Length = 539

 Score = 32.7 bits (73), Expect = 0.055,   Method: Composition-based stats.
 Identities = 13/21 (61%), Positives = 16/21 (76%)

Query: 91  LDVRTPEEFSAGHATGAINVP 111
           LDVRTPEE+ AGH  G+ + P
Sbjct: 286 LDVRTPEEYEAGHLPGSRSTP 306


>pdb|3R2U|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of
           Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp.
           Aureus Col
 pdb|3R2U|B Chain B, 2.1 Angstrom Resolution Crystal Structure Of
           Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp.
           Aureus Col
 pdb|3R2U|C Chain C, 2.1 Angstrom Resolution Crystal Structure Of
           Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp.
           Aureus Col
 pdb|3R2U|D Chain D, 2.1 Angstrom Resolution Crystal Structure Of
           Metallo-Beta-Lactamase From Staphylococcus Aureus Subsp.
           Aureus Col
          Length = 466

 Score = 30.4 bits (67), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 91  LDVRTPEEFSAGHATGAINVPY 112
            D+R+ E +  GH  G IN+PY
Sbjct: 300 FDLRSKEAYHGGHIEGTINIPY 321



 Score = 26.6 bits (57), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 91  LDVRTPEEFSAGHATGAINVPY 112
           LDVR   E++ GH + A++VP+
Sbjct: 391 LDVRNDNEWNNGHLSQAVHVPH 412


>pdb|3D1P|A Chain A, Atomic Resolution Structure Of Uncharacterized Protein
           From Saccharomyces Cerevisiae
          Length = 139

 Score = 29.6 bits (65), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 91  LDVRTPEEFSAGHATGAINVPY 112
           +DVR P E+S  H   +INVPY
Sbjct: 44  VDVREPSEYSIVHIPASINVPY 65


>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
 pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
 pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
           Coadr-Rhd
 pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
           Coadr-Rhd
 pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
 pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
          Length = 588

 Score = 29.3 bits (64), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 83  LLQAGHRYLDVRTPEEFSAGHATGAINVP 111
           +++ G   +DVR P E   G   G+IN+P
Sbjct: 499 IVENGGYLIDVREPNELKQGXIKGSINIP 527


>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
           Tuberculosis: Orthorhombic Form
 pdb|3AAY|B Chain B, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
           Tuberculosis: Orthorhombic Form
          Length = 277

 Score = 28.5 bits (62), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 16/38 (42%)

Query: 91  LDVRTPEEFSA----------------GHATGAINVPY 112
           +DVR+P+EFS                 GH  GAINVP+
Sbjct: 161 IDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPW 198


>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From
           Mycobacterium Tuberculosis
 pdb|3HWI|B Chain B, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From
           Mycobacterium Tuberculosis
          Length = 298

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 16/38 (42%)

Query: 91  LDVRTPEEFSA----------------GHATGAINVPY 112
           +DVR+P+EFS                 GH  GAINVP+
Sbjct: 182 IDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPW 219


>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
           Tuberculosis: Monoclinic Form
 pdb|3AAX|B Chain B, Crystal Structure Of Probable Thiosulfate
           Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium
           Tuberculosis: Monoclinic Form
          Length = 277

 Score = 28.5 bits (62), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 16/38 (42%)

Query: 91  LDVRTPEEFSA----------------GHATGAINVPY 112
           +DVR+P+EFS                 GH  GAINVP+
Sbjct: 161 IDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPW 198


>pdb|1QB0|A Chain A, Human Cdc25b Catalytic Domain
 pdb|1CWS|A Chain A, Human Cdc25b Catalytic Domain With Tungstate
 pdb|1CWR|A Chain A, Human Cdc25b Catalytic Domain Without Ion In Catalytic
           Site
          Length = 211

 Score = 28.1 bits (61), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 69  VDCRYPYEYEGGHIKTAVNLPLERDAE 95


>pdb|2UZQ|A Chain A, Protein Phosphatase, New Crystal Form
 pdb|2UZQ|B Chain B, Protein Phosphatase, New Crystal Form
 pdb|2UZQ|C Chain C, Protein Phosphatase, New Crystal Form
 pdb|2UZQ|D Chain D, Protein Phosphatase, New Crystal Form
 pdb|2UZQ|E Chain E, Protein Phosphatase, New Crystal Form
 pdb|2UZQ|F Chain F, Protein Phosphatase, New Crystal Form
          Length = 203

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 61  VDCRYPYEYEGGHIKTAVNLPLERDAE 87


>pdb|2IFD|A Chain A, Crystal Structure Of A Remote Binding Site Mutant, R492l,
           Of Cdc25b Phosphatase Catalytic Domain
          Length = 175

 Score = 27.7 bits (60), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 49  VDCRYPYEYEGGHIKTAVNLPLERDAE 75


>pdb|1YMK|A Chain A, Crystal Structure Of The Cdc25b Phosphatase Catalytic
           Domain In The Apo Form
 pdb|1YS0|A Chain A, Crystal Structure Of The Cdc25b Phosphatase Catalytic
           Domain With The Active Site Cysteine In The Disulfide
           Form
          Length = 175

 Score = 27.7 bits (60), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 49  VDCRYPYEYEGGHIKTAVNLPLERDAE 75


>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase C43sC531S DOUBLE MUTANT
 pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase C43sC531S DOUBLE MUTANT
          Length = 574

 Score = 27.7 bits (60), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 91  LDVRTPEEFSAGHATGAINVP 111
           LDVR P E   G   GA+N+P
Sbjct: 490 LDVRNPGELQNGGLEGAVNIP 510


>pdb|1CWT|A Chain A, Human Cdc25b Catalytic Domain With Methyl Mercury
          Length = 178

 Score = 27.7 bits (60), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 51  VDCRYPYEYEGGHIKTAVNLPLERDAE 77


>pdb|2A2K|A Chain A, Crystal Structure Of An Active Site Mutant, C473s, Of
           Cdc25b Phosphatase Catalytic Domain
          Length = 175

 Score = 27.7 bits (60), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 49  VDCRYPYEYEGGHIKTAVNLPLERDAE 75


>pdb|1YM9|A Chain A, Crystal Structure Of The Cdc25b Phosphatase Catalytic
           Domain With The Active Site Cysteine In The Sulfinic
           Form
 pdb|1YMD|A Chain A, Crystal Structure Of The Cdc25b Phosphatase Catalytic
           Domain With The Active Site Cysteine In The Sulfonic
           Form
 pdb|1YML|A Chain A, Crystal Structure Of The Cdc25b Phosphatase Catalytic
           Domain With The Active Site Cysteine In The Sulfenic
           Form
          Length = 175

 Score = 27.7 bits (60), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 49  VDCRYPYEYEGGHIKTAVNLPLERDAE 75


>pdb|2IFV|A Chain A, Crystal Structure Of An Active Site Mutant, C473d, Of
           Cdc25b Phosphatase Catalytic Domain
          Length = 175

 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 91  LDVRTPEEFSAGHATGAINVPYMDDKE 117
           +D R P E+  GH   A+N+P   D E
Sbjct: 49  VDCRYPYEYEGGHIKTAVNLPLERDAE 75


>pdb|1GN0|A Chain A, Escherichia Coli Glpe Sulfurtransferase Soaked With Kcn
          Length = 108

 Score = 27.7 bits (60), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 75  VPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINV 110
           + V  AH+ LQ     L D+R P+ F+ GHA  A ++
Sbjct: 7   INVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHL 43


>pdb|1GMX|A Chain A, Escherichia Coli Glpe Sulfurtransferase
          Length = 108

 Score = 27.7 bits (60), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 75  VPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINV 110
           + V  AH+ LQ     L D+R P+ F+ GHA  A ++
Sbjct: 7   INVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHL 43


>pdb|3G5J|A Chain A, Crystal Structure Of N-Terminal Domain Of Putative AtpGTP
           BINDING Protein From Clostridium Difficile 630
 pdb|3G5J|B Chain B, Crystal Structure Of N-Terminal Domain Of Putative AtpGTP
           BINDING Protein From Clostridium Difficile 630
          Length = 134

 Score = 27.3 bits (59), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 90  YLDVRTPEEFSAGHATGAINVPYMDDKEPEICG 122
           ++DVRT  E+   H   AIN P   + E    G
Sbjct: 20  FVDVRTEGEYEEDHILNAINXPLFKNNEHNEVG 52


>pdb|3TP9|A Chain A, Crystal Structure Of Alicyclobacillus Acidocaldarius
           Protein With Beta-Lactamase And Rhodanese Domains
 pdb|3TP9|B Chain B, Crystal Structure Of Alicyclobacillus Acidocaldarius
           Protein With Beta-Lactamase And Rhodanese Domains
          Length = 474

 Score = 27.3 bits (59), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 66  LEAVGVPTSV---PVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPY 112
           L  +G P  V   P RV     + G   LDVR  + F+  H  G++N+P+
Sbjct: 264 LAELGAPERVDLPPERV--RAWREGGVVLDVRPADAFAKRHLAGSLNIPW 311



 Score = 26.6 bits (57), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 76  PVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVP 111
           P  V   L Q G   LDVR  +E++ GH   A ++P
Sbjct: 378 PDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIP 413


>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase C531s Mutant
 pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase C531s Mutant
          Length = 565

 Score = 27.3 bits (59), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 91  LDVRTPEEFSAGHATGAINVP 111
           LDVR P E   G   GA+N+P
Sbjct: 490 LDVRNPGELQNGGLEGAVNIP 510


>pdb|1C25|A Chain A, Human Cdc25a Catalytic Domain
          Length = 161

 Score = 26.9 bits (58), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 91  LDVRTPEEFSAGHATGAINV 110
           +D R P E+  GH  GA+N+
Sbjct: 48  IDCRYPYEYEGGHIKGAVNL 67


>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase
 pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
           Persulfide Reductase
          Length = 574

 Score = 26.9 bits (58), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 91  LDVRTPEEFSAGHATGAINVP 111
           LDVR P E   G   GA+N+P
Sbjct: 490 LDVRNPGELQNGGLEGAVNIP 510


>pdb|3C01|E Chain E, Crystal Structural Of Native Spas C-Terminal Domain
 pdb|3C01|F Chain F, Crystal Structural Of Native Spas C-Terminal Domain
 pdb|3C01|G Chain G, Crystal Structural Of Native Spas C-Terminal Domain
 pdb|3C01|H Chain H, Crystal Structural Of Native Spas C-Terminal Domain
          Length = 98

 Score = 26.6 bits (57), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 61 SLRGNLEAVGVPTSVPVRVAHELLQAGHRYLDVRTPEEF 99
          ++R   E VGVP  V +++A  L +   RY D+ + EE 
Sbjct: 31 AVRAYAEKVGVPVIVDIKLARSLFKTHRRY-DLVSLEEI 68


>pdb|3FOZ|A Chain A, Structure Of E. Coli Isopentenyl-Trna Transferase In
           Complex With E. Coli Trna(Phe)
 pdb|3FOZ|B Chain B, Structure Of E. Coli Isopentenyl-Trna Transferase In
           Complex With E. Coli Trna(Phe)
 pdb|2ZXU|A Chain A, Crystal Structure Of Trna Modification Enzyme Miaa In The
           Complex With Trna(Phe) And Dmaspp
 pdb|2ZXU|B Chain B, Crystal Structure Of Trna Modification Enzyme Miaa In The
           Complex With Trna(Phe) And Dmaspp
          Length = 316

 Score = 26.2 bits (56), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 80  AHELLQAGHRYLDVRTPEE-FSAG 102
           A ELL A HR LD+R P + +SA 
Sbjct: 59  AEELLAAPHRLLDIRDPSQAYSAA 82


>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
 pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
          Length = 481

 Score = 25.8 bits (55), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 10/52 (19%)

Query: 79  VAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMDDKEPEICGGSIDSFSK 130
           V+H   QAG   + +RT EEF            ++ DK+  I G   DSFS+
Sbjct: 101 VSHLKKQAGPASVPLRTEEEFKK----------FISDKDASIVGFFDDSFSE 142


>pdb|2ZM5|A Chain A, Crystal Structure Of Trna Modification Enzyme Miaa In The
           Complex With Trna(Phe)
 pdb|2ZM5|B Chain B, Crystal Structure Of Trna Modification Enzyme Miaa In The
           Complex With Trna(Phe)
          Length = 316

 Score = 25.8 bits (55), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 80  AHELLQAGHRYLDVRTPEE-FSAG 102
           A ELL A HR LD+R P + +SA 
Sbjct: 59  AEELLAAPHRLLDIRDPSQAYSAA 82


>pdb|3HGU|A Chain A, Structure Of Phenazine Antibiotic Biosynthesis Protein
 pdb|3HGU|B Chain B, Structure Of Phenazine Antibiotic Biosynthesis Protein
          Length = 369

 Score = 25.8 bits (55), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 43  CDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPV 77
            D I FI+S+IL  C  ++  G+  A+GV  S+ +
Sbjct: 245 LDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI 279


>pdb|3L2K|A Chain A, Structure Of Phenazine Antibiotic Biosynthesis Protein
           With Substrate
 pdb|3L2K|B Chain B, Structure Of Phenazine Antibiotic Biosynthesis Protein
           With Substrate
          Length = 366

 Score = 25.8 bits (55), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 43  CDNIGFISSKILSFCPKASLRGNLEAVGVPTSVPV 77
            D I FI+S+IL  C  ++  G+  A+GV  S+ +
Sbjct: 242 LDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI 276


>pdb|3HGV|A Chain A, Structure Of Phenazine Antibiotic Biosynthesis Protein
 pdb|3HGV|B Chain B, Structure Of Phenazine Antibiotic Biosynthesis Protein
          Length = 369

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 43  CDNIGFISSKILSFCPKASLRGNLEAVGVPTSV 75
            D I FI+S+IL  C  ++  G+  A+GV  S+
Sbjct: 245 LDEIKFIASEILPDCEFSASYGSTSALGVSRSL 277


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.136    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,446,293
Number of Sequences: 62578
Number of extensions: 120913
Number of successful extensions: 273
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 240
Number of HSP's gapped (non-prelim): 37
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)