Query 032870
Match_columns 131
No_of_seqs 148 out of 1031
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 11:04:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.4E-49 8.1E-54 276.9 16.3 127 4-130 7-133 (166)
2 2fu0_A Cyclophilin, putative; 100.0 4.6E-49 1.6E-53 274.0 15.6 124 7-130 4-127 (160)
3 2hq6_A Serologically defined c 100.0 6.3E-49 2.2E-53 278.7 16.1 128 3-130 19-146 (185)
4 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.1E-48 3.6E-53 272.5 15.6 122 9-130 1-122 (161)
5 2a2n_A Peptidylprolyl isomeras 100.0 1.9E-48 6.5E-53 274.4 16.4 127 4-130 17-143 (176)
6 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.7E-48 9.1E-53 277.5 16.4 127 4-130 15-141 (197)
7 2poe_A Cyclophilin-like protei 100.0 3.7E-48 1.3E-52 274.8 15.3 126 5-130 13-142 (185)
8 2k7n_A Peptidyl-prolyl CIS-tra 100.0 6.9E-48 2.3E-52 276.4 16.8 126 5-130 8-133 (203)
9 2b71_A Cyclophilin-like protei 100.0 3.8E-48 1.3E-52 276.6 15.3 124 7-130 37-160 (196)
10 3bkp_A Cyclophilin; malaria, i 100.0 1.5E-47 5.1E-52 279.8 15.9 128 3-130 16-159 (232)
11 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.9E-47 6.4E-52 274.5 15.3 126 5-130 3-140 (201)
12 1w74_A Peptidyl-prolyl CIS-tra 100.0 4.1E-47 1.4E-51 270.5 15.4 124 4-130 19-157 (191)
13 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.7E-46 5.9E-51 263.6 16.1 125 5-130 7-140 (172)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 2.1E-46 7.1E-51 264.4 16.1 126 4-130 6-145 (177)
15 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.4E-46 8.2E-51 261.5 16.1 123 7-130 2-133 (165)
16 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.8E-46 9.7E-51 262.9 16.1 126 4-130 7-141 (173)
17 2igv_A Peptidyl-prolyl CIS-tra 100.0 2.4E-46 8.1E-51 263.3 15.6 123 7-130 2-140 (173)
18 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.1E-46 7.3E-51 262.9 14.9 123 7-130 2-139 (170)
19 1a58_A Cyclophilin; isomerase, 100.0 3.4E-46 1.2E-50 263.3 15.3 125 5-130 3-144 (177)
20 2wfi_A Peptidyl-prolyl CIS-tra 100.0 8.7E-46 3E-50 261.6 16.3 126 4-130 5-147 (179)
21 2poy_A Peptidyl-prolyl CIS-tra 100.0 9.8E-46 3.4E-50 262.5 15.3 126 4-130 15-156 (186)
22 2haq_A Cyclophilin; rotamase, 100.0 1.1E-45 3.8E-50 259.3 15.3 125 4-130 7-140 (172)
23 3pmp_A Cyclophilin A; peptidyl 100.0 1.7E-45 5.7E-50 257.1 15.9 122 8-130 2-132 (164)
24 1z81_A Cyclophilin; structural 100.0 1.2E-45 4.2E-50 268.8 15.4 126 4-130 55-194 (229)
25 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.3E-45 4.5E-50 262.3 13.8 123 7-130 14-145 (188)
26 1v9t_A Cyclophilin B; beta bar 100.0 3.7E-45 1.3E-49 255.8 15.7 122 6-130 2-129 (166)
27 2he9_A NK-tumor recognition pr 100.0 4.8E-45 1.6E-49 260.1 16.1 125 5-130 16-157 (192)
28 3rdd_A Peptidyl-prolyl CIS-tra 100.0 7.5E-45 2.6E-49 257.8 15.4 126 4-130 18-152 (184)
29 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.2E-44 4.2E-49 258.2 16.2 126 4-130 23-157 (193)
30 1lop_A Cyclophilin A; rotamase 100.0 6.3E-45 2.2E-49 254.2 12.9 118 10-130 1-127 (164)
31 4fru_A Cyclophilin B, peptidyl 100.0 5.3E-45 1.8E-49 258.9 12.7 125 5-130 9-142 (185)
32 3s6m_A Peptidyl-prolyl CIS-tra 100.0 8E-45 2.7E-49 254.4 13.0 121 7-130 2-131 (167)
33 2c3b_A Ppiase, cyclophilin; is 100.0 3.7E-45 1.3E-49 257.0 9.2 115 15-130 19-137 (172)
34 1ihg_A Cyclophilin 40; ppiase 100.0 5.7E-44 1.9E-48 275.8 16.7 122 8-130 15-153 (370)
35 2ose_A Probable peptidyl-proly 100.0 1.2E-43 4.1E-48 259.5 13.4 125 3-130 9-174 (234)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 8.4E-41 2.9E-45 256.9 8.5 124 6-130 168-333 (369)
37 2nnz_A Hypothetical protein; b 93.3 0.13 4.3E-06 34.8 4.6 34 7-40 28-61 (153)
38 3kop_A Uncharacterized protein 87.7 1 3.4E-05 31.2 4.9 32 9-40 22-55 (188)
39 2khf_A PLNJ; anti-microbial, b 79.1 0.57 1.9E-05 21.2 0.5 16 33-48 3-18 (26)
40 1zx8_A Hypothetical protein TM 72.2 18 0.0006 23.7 9.9 92 8-130 12-114 (136)
41 1x7f_A Outer surface protein; 69.6 4.5 0.00015 31.2 3.7 41 89-130 325-365 (385)
42 2p0o_A Hypothetical protein DU 68.0 4.1 0.00014 31.2 3.3 41 89-130 299-339 (372)
43 2k9u_B Filamin-binding LIM pro 54.5 6.9 0.00024 18.0 1.4 14 103-116 7-20 (26)
44 2fhm_A Probable acylphosphatas 38.2 44 0.0015 19.8 3.8 38 13-53 35-72 (91)
45 2lxf_A Uncharacterized protein 37.8 28 0.00097 22.2 3.0 28 14-43 68-95 (121)
46 1ulr_A Putative acylphosphatas 31.1 71 0.0024 18.7 3.9 29 13-43 35-63 (88)
47 3ee7_A Replicase polyprotein 1 29.8 37 0.0013 21.6 2.4 23 4-26 47-71 (121)
48 1uw7_A NSP9; viral protein, re 29.0 47 0.0016 21.8 2.9 23 4-26 77-101 (143)
49 2j97_A Replicase polyprotein 1 29.0 19 0.00066 22.5 1.0 22 5-26 46-67 (109)
50 3bbd_A Ribosome biogenesis pro 29.0 64 0.0022 22.5 3.8 48 8-56 75-124 (205)
51 3trg_A Acylphosphatase; fatty 27.4 53 0.0018 19.9 2.9 29 13-43 45-73 (98)
52 1urr_A CG18505 protein; acylph 25.7 93 0.0032 18.8 3.8 37 14-53 45-82 (102)
53 2ks0_A Uncharacterized protein 24.8 77 0.0026 18.2 3.0 16 8-23 20-35 (71)
54 3oii_A Essential for mitotic g 23.8 78 0.0027 22.9 3.5 48 8-56 110-166 (253)
55 1pch_A Phosphocarrier protein; 22.9 1.1E+02 0.0038 17.9 3.7 31 17-47 56-88 (88)
56 2gv1_A Probable acylphosphatas 21.6 1.3E+02 0.0046 17.6 6.0 38 13-53 37-75 (92)
57 1rji_A BMKX, potassium channel 21.2 24 0.0008 16.6 0.2 9 40-48 22-30 (31)
58 1w2i_A Acylphosphatase; hydrol 21.0 85 0.0029 18.5 2.9 38 13-53 37-74 (91)
No 1
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.4e-49 Score=276.91 Aligned_cols=127 Identities=68% Similarity=1.153 Sum_probs=121.9
Q ss_pred CCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCC
Q 032870 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (131)
Q Consensus 4 ~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (131)
+...+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++.+++++|+..+++|.
T Consensus 7 ~~~~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~ 86 (166)
T 2x7k_A 7 DSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDEL 86 (166)
T ss_dssp TTCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCC
T ss_pred cccCCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCcccccc
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
.+.++|.++|+|||+++++++++|||||++.++|+||++|+|||||+
T Consensus 87 ~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv 133 (166)
T 2x7k_A 87 HPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC 133 (166)
T ss_dssp CTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred ccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEE
Confidence 77899998999999999999999999999999999999999999997
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=4.6e-49 Score=273.99 Aligned_cols=124 Identities=48% Similarity=0.793 Sum_probs=119.4
Q ss_pred CCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCCC
Q 032870 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (131)
Q Consensus 7 ~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (131)
..+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++++++++|+..+++|..+.
T Consensus 4 ~~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 83 (160)
T 2fu0_A 4 TPKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDH 83 (160)
T ss_dssp -CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTT
T ss_pred CCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCC
Confidence 36789999999999999999999999999999999999999999999999999999999899999999999999998778
Q ss_pred CccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 87 LKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 87 l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++|.++|+|+|+++++++++|||||++.++|+||++|+|||||+
T Consensus 84 l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv 127 (160)
T 2fu0_A 84 LNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVT 127 (160)
T ss_dssp BCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEE
Confidence 99998999999999999999999999999999999999999997
No 3
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=6.3e-49 Score=278.71 Aligned_cols=128 Identities=45% Similarity=0.808 Sum_probs=122.8
Q ss_pred CCCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCC
Q 032870 3 ASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDE 82 (131)
Q Consensus 3 ~~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e 82 (131)
.+++.+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++.+++++|+..+++|
T Consensus 19 ~~~~~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE 98 (185)
T 2hq6_A 19 SEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDE 98 (185)
T ss_dssp CCCCCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCC
T ss_pred cCCCCCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCCccccc
Confidence 45677889999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred CCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 83 IKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 83 ~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
..+.++|.++|+|+|++.++++++|||||+++++++||++|+|||||+
T Consensus 99 ~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~ 146 (185)
T 2hq6_A 99 FHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT 146 (185)
T ss_dssp CBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC
T ss_pred cccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE
Confidence 877899988999999999999999999999999999999999999996
No 4
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.1e-48 Score=272.55 Aligned_cols=122 Identities=52% Similarity=0.865 Sum_probs=118.2
Q ss_pred CEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCCCCc
Q 032870 9 PEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPELK 88 (131)
Q Consensus 9 ~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~l~ 88 (131)
++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++++++++|+..+++|..+.++
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~ 80 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLK 80 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCC
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999877899
Q ss_pred cCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 89 HTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 89 ~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|.++|+|||+++++++++|||||++.++++||++|+|||||+
T Consensus 81 h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv 122 (161)
T 2ok3_A 81 HNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 122 (161)
T ss_dssp SCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEe
Confidence 988999999999999999999999999999999999999997
No 5
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.9e-48 Score=274.43 Aligned_cols=127 Identities=48% Similarity=0.767 Sum_probs=121.1
Q ss_pred CCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCC
Q 032870 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (131)
Q Consensus 4 ~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (131)
+......|.++|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++.+++++|+..|++|.
T Consensus 17 ~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~ 96 (176)
T 2a2n_A 17 PKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEF 96 (176)
T ss_dssp CCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCC
T ss_pred CCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCcccccc
Confidence 34446789999999999999999999999999999999999999999999999999999999899999999999999998
Q ss_pred CCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
.+.++|.++|+|+|++.++++++|||||++.++|+||++|+|||||+
T Consensus 97 ~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv 143 (176)
T 2a2n_A 97 HSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT 143 (176)
T ss_dssp CTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred ccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEe
Confidence 77899998999999999999999999999999999999999999997
No 6
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-48 Score=277.51 Aligned_cols=127 Identities=47% Similarity=0.854 Sum_probs=122.0
Q ss_pred CCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCC
Q 032870 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEI 83 (131)
Q Consensus 4 ~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~ 83 (131)
+.+...+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++.+++++|+..|++|.
T Consensus 15 ~~~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~dE~ 94 (197)
T 1zkc_A 15 VPRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEF 94 (197)
T ss_dssp CCCSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCCCC
T ss_pred CCCCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCcccccc
Confidence 45667899999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 84 KPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 84 ~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
.+.++|.++|+|+|++.++++++|||||++.++++||++|+|||+|+
T Consensus 95 ~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv 141 (197)
T 1zkc_A 95 RPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVV 141 (197)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEE
Confidence 78999999999999999999999999999999999999999999997
No 7
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=3.7e-48 Score=274.83 Aligned_cols=126 Identities=52% Similarity=0.874 Sum_probs=120.2
Q ss_pred CCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCC
Q 032870 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIK 84 (131)
Q Consensus 5 ~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~ 84 (131)
.+..+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++++++++|+..|++|..
T Consensus 13 ~~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~ 92 (185)
T 2poe_A 13 NLYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDEIY 92 (185)
T ss_dssp --CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCCCC
T ss_pred CCCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccCcccEEEEEeCC----CCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 85 PELKHTGAGILSMANAG----PNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 85 ~~l~~~~~G~v~~~~~~----~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+.++|.++|+|||++++ +++++|||||+++++|+||++|+|||||+
T Consensus 93 ~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv 142 (185)
T 2poe_A 93 PELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLI 142 (185)
T ss_dssp TTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEe
Confidence 89999889999999998 99999999999999999999999999997
No 8
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=6.9e-48 Score=276.36 Aligned_cols=126 Identities=68% Similarity=1.161 Sum_probs=121.3
Q ss_pred CCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCC
Q 032870 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIK 84 (131)
Q Consensus 5 ~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~ 84 (131)
...+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+||+||+.+++.+++++|+..|++|..
T Consensus 8 ~~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~ 87 (203)
T 2k7n_A 8 SWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELH 87 (203)
T ss_dssp SCCCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCC
T ss_pred ccCCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCccccccc
Confidence 34678999999999999999999999999999999999999999999999999999999998899999999999999987
Q ss_pred CCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 85 PELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 85 ~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+.++|.++|+|+|++.++++++|||||++.++++||++|+|||||+
T Consensus 88 ~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~Vv 133 (203)
T 2k7n_A 88 PDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVC 133 (203)
T ss_dssp CSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEE
T ss_pred ccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEE
Confidence 8999998999999999999999999999999999999999999997
No 9
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.8e-48 Score=276.63 Aligned_cols=124 Identities=60% Similarity=1.036 Sum_probs=120.1
Q ss_pred CCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCCC
Q 032870 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (131)
Q Consensus 7 ~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (131)
.+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.+++.+++++|+..+++|..+.
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 116 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKE 116 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTT
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999998788
Q ss_pred CccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 87 LKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 87 l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++|.++|+|+|+++++++++|||||+++++|+||++|+|||||+
T Consensus 117 l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv 160 (196)
T 2b71_A 117 LKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVS 160 (196)
T ss_dssp CCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe
Confidence 99988999999999999999999999999999999999999997
No 10
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-47 Score=279.76 Aligned_cols=128 Identities=47% Similarity=0.773 Sum_probs=120.5
Q ss_pred CCCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCccc--CccCC
Q 032870 3 ASDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIY--GHVFE 80 (131)
Q Consensus 3 ~~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~--~~~~~ 80 (131)
.+++.+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+.++++++.++| +..|+
T Consensus 16 ~~p~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~g~~f~ 95 (232)
T 3bkp_A 16 FQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDGKPFD 95 (232)
T ss_dssp CCCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTTTCCBC
T ss_pred ccCCCCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccCCCccC
Confidence 4567788999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred CCCCCCCccCcccEEEEEeCCC--------------CCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 81 DEIKPELKHTGAGILSMANAGP--------------NTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 81 ~e~~~~l~~~~~G~v~~~~~~~--------------~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+|..+.++|+++|+|+|++.++ ++++|||||++.++|+||++|+|||+|+
T Consensus 96 dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv 159 (232)
T 3bkp_A 96 VETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT 159 (232)
T ss_dssp CCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC
T ss_pred CccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE
Confidence 9987789999999999999887 6999999999999999999999999996
No 11
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-47 Score=274.52 Aligned_cols=126 Identities=35% Similarity=0.597 Sum_probs=113.4
Q ss_pred CCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcC-----CCCCCCCCCCccc----
Q 032870 5 DDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGG-----DPTGTGRGGDSIY---- 75 (131)
Q Consensus 5 ~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G-----~~~~~~~~~~~~~---- 75 (131)
.+.+.+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||| |+.++|.+++++|
T Consensus 3 ~~~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~ 82 (201)
T 3bo7_A 3 LKKKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISG 82 (201)
T ss_dssp --CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCS
T ss_pred CCCceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccc
Confidence 3567899999999999999999999999999999999999999999999999999999 9998889999998
Q ss_pred ---CccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 76 ---GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 76 ---~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+..|++|..+.++|.++|+|||+++++++++|||||++.++++||++|+|||+|+
T Consensus 83 ~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv 140 (201)
T 3bo7_A 83 FPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVV 140 (201)
T ss_dssp STTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred ccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEe
Confidence 8899999778999988999999999999999999999999999999999999997
No 12
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=4.1e-47 Score=270.47 Aligned_cols=124 Identities=44% Similarity=0.767 Sum_probs=115.4
Q ss_pred CCCCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHH---------------hcCCcCCceeEEEecCcEEEcCCCCCCC
Q 032870 4 SDDGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELS---------------RRGYYNNSKFHRIIKDFIVQGGDPTGTG 68 (131)
Q Consensus 4 ~~~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~---------------~~g~Y~g~~f~rv~~~~~iq~G~~~~~~ 68 (131)
+++.+++|.|+|+.|+|+||||++.||+||+||++|| +.+||+|+.||||+|+|+|||||+.+++
T Consensus 19 ~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g~G 98 (191)
T 1w74_A 19 SPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTG 98 (191)
T ss_dssp --CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTSSS
T ss_pred CCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCCCC
Confidence 5667889999999999999999999999999999999 4589999999999999999999998877
Q ss_pred CCCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 69 RGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 69 ~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++ ++..|++|..+.++|.++|+|||+++++++++|||||++.++|+||++|+||||||
T Consensus 99 ~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv 157 (191)
T 1w74_A 99 RGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVI 157 (191)
T ss_dssp SCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEC
T ss_pred CCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEE
Confidence 776 48889999778999999999999999999999999999999999999999999997
No 13
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.7e-46 Score=263.65 Aligned_cols=125 Identities=46% Similarity=0.780 Sum_probs=116.6
Q ss_pred CCCCCEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCCCC-CCCCCCCccc
Q 032870 5 DDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIY 75 (131)
Q Consensus 5 ~~~~~~v~l~-----ts~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~ 75 (131)
...+++|+|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+|||||+. ++|++++++|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~ 86 (172)
T 2cmt_A 7 KRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIY 86 (172)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccC
Confidence 4567899999 679999999999999999999999998 488 999999999999999999987 7788899999
Q ss_pred CccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 76 GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 76 ~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+..|++|+ ..++|.++|+|||+++++++++|||||++.++|+||++|+|||+|+
T Consensus 87 g~~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv 140 (172)
T 2cmt_A 87 GRKFDDEN-FQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVV 140 (172)
T ss_dssp BSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCcccccc-cCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE
Confidence 99999996 6899998999999999999999999999999999999999999997
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=2.1e-46 Score=264.39 Aligned_cols=126 Identities=42% Similarity=0.723 Sum_probs=119.2
Q ss_pred CCCCCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHhcCC--------cCCceeEEEecCcEEEcCCCC-CCCC
Q 032870 4 SDDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSRRGY--------YNNSKFHRIIKDFIVQGGDPT-GTGR 69 (131)
Q Consensus 4 ~~~~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~~~g~--------Y~g~~f~rv~~~~~iq~G~~~-~~~~ 69 (131)
..+.+++|+|++ +.|+|+||||++.||+||+||++||+.++ |+|+.||||+|+|+|||||+. ++|+
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 85 (177)
T 1mzw_A 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGT 85 (177)
T ss_dssp CCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSC
T ss_pred cCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCC
Confidence 456789999996 48999999999999999999999999998 999999999999999999986 7888
Q ss_pred CCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 70 GGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 70 ~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++++|++.|++|+ ..++|.++|+|||+++++++++|||||++.++|+||++|+|||+|+
T Consensus 86 gg~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv 145 (177)
T 1mzw_A 86 GVASIYRGPFADEN-FKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII 145 (177)
T ss_dssp CCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCccCCCcccCcc-cccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEe
Confidence 99999999999996 6899999999999999999999999999999999999999999997
No 15
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.4e-46 Score=261.52 Aligned_cols=123 Identities=48% Similarity=0.775 Sum_probs=116.6
Q ss_pred CCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCCCC-CCCCCCCcccCc
Q 032870 7 GPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIYGH 77 (131)
Q Consensus 7 ~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~~~ 77 (131)
.+++|+|++ +.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+|||||+. +++++++++|+.
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~ 81 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS 81 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCC
Confidence 378999998 48999999999999999999999999 999 999999999999999999986 688888999999
Q ss_pred cCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 78 VFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 78 ~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
.|++|+ +.++|.++|+|||++.++++++|||||++.+.|+||++|+|||||+
T Consensus 82 ~f~dE~-~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv 133 (165)
T 2z6w_A 82 RFPDEN-FTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVI 133 (165)
T ss_dssp CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cccCcc-cccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEE
Confidence 999995 7899998999999999999999999999999999999999999997
No 16
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.8e-46 Score=262.87 Aligned_cols=126 Identities=45% Similarity=0.720 Sum_probs=116.3
Q ss_pred CCCCCCEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCCCC-CCCCCCCcc
Q 032870 4 SDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSI 74 (131)
Q Consensus 4 ~~~~~~~v~l~-----ts~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~ 74 (131)
....+++|+|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+|||||+. +++++++++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (173)
T 2r99_A 7 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSI 86 (173)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBT
T ss_pred cccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCcc
Confidence 34567899999 579999999999999999999999995 788 999999999999999999987 688889999
Q ss_pred cCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|+..|++|+ ..++|.++|+|+|+++++++++|||||++.++++||++|+|||+|+
T Consensus 87 ~g~~f~dE~-~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv 141 (173)
T 2r99_A 87 YGKKFDDEN-FILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVT 141 (173)
T ss_dssp TBSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCcccCcc-cCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEE
Confidence 999999996 6889999999999999999999999999999999999999999997
No 17
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=2.4e-46 Score=263.32 Aligned_cols=123 Identities=48% Similarity=0.778 Sum_probs=116.7
Q ss_pred CCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--C--------CcCCceeEEEecCcEEEcCCCC-CCCCC
Q 032870 7 GPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--G--------YYNNSKFHRIIKDFIVQGGDPT-GTGRG 70 (131)
Q Consensus 7 ~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~--g--------~Y~g~~f~rv~~~~~iq~G~~~-~~~~~ 70 (131)
.+++|+|+++ .|+|+||||++.||+||+||++||+. | ||+|+.||||+|+|+|||||+. ++|++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 4789999998 89999999999999999999999986 5 7999999999999999999986 78889
Q ss_pred CCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 71 GDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 71 ~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++++|+..|++|+ ..++|.++|+|||+++++++++|||||++.+.|+||++|+|||+|+
T Consensus 82 g~siyg~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv 140 (173)
T 2igv_A 82 GESIYGEKFPDEN-FKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVV 140 (173)
T ss_dssp CCBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCccCCCcccCcc-cccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEe
Confidence 9999999999996 6899999999999999999999999999999999999999999997
No 18
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.1e-46 Score=262.90 Aligned_cols=123 Identities=50% Similarity=0.817 Sum_probs=117.1
Q ss_pred CCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh-cCC--------cCCceeEEEecCcEEEcCCCC-CCCCCC
Q 032870 7 GPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSR-RGY--------YNNSKFHRIIKDFIVQGGDPT-GTGRGG 71 (131)
Q Consensus 7 ~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~-~g~--------Y~g~~f~rv~~~~~iq~G~~~-~~~~~~ 71 (131)
.+++|+|+++ .|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+|||||+. ++++++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 81 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGG 81 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 5789999998 8999999999999999999999998 588 999999999999999999986 788889
Q ss_pred CcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 72 DSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 72 ~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++|++.|++|+ ..++|.++|+|||+++++++++|||||++.++|+||++|+|||+|+
T Consensus 82 ~si~g~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv 139 (170)
T 1qng_A 82 ESIYGRSFTDEN-FNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVI 139 (170)
T ss_dssp CBTTBSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred ccccCCcccccc-cccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEE
Confidence 999999999996 6899999999999999999999999999999999999999999997
No 19
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=3.4e-46 Score=263.35 Aligned_cols=125 Identities=48% Similarity=0.790 Sum_probs=117.2
Q ss_pred CCCCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--------C---CcCCceeEEEecCcEEEcCCCC-CC
Q 032870 5 DDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--------G---YYNNSKFHRIIKDFIVQGGDPT-GT 67 (131)
Q Consensus 5 ~~~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~--------g---~Y~g~~f~rv~~~~~iq~G~~~-~~ 67 (131)
+..+++|+|+++ .|+|+||||++.||+||+||++||+. | ||+|+.||||+|+|+|||||+. ++
T Consensus 3 ~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSS
T ss_pred CCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCC
Confidence 456889999975 89999999999999999999999984 4 8999999999999999999986 78
Q ss_pred CCCCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++++++|+..|++|+ ..++|.++|+|||+++++++++|||||++.++|+||++|+|||+|+
T Consensus 83 g~gg~si~g~~f~dE~-~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv 144 (177)
T 1a58_A 83 GTGGESIYGGMFDDEE-FVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVV 144 (177)
T ss_dssp SSCCCCTTSSCBCCCC-CCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCCCcccCCcccCcc-cCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEE
Confidence 8899999999999997 5789999999999999999999999999999999999999999997
No 20
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=8.7e-46 Score=261.64 Aligned_cols=126 Identities=45% Similarity=0.736 Sum_probs=116.4
Q ss_pred CCCCCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHh-----------cCCcCCceeEEEecCcEEEcCCCC-C
Q 032870 4 SDDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR-----------RGYYNNSKFHRIIKDFIVQGGDPT-G 66 (131)
Q Consensus 4 ~~~~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~~-----------~g~Y~g~~f~rv~~~~~iq~G~~~-~ 66 (131)
+...+++|+|+. +.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|+|||||+. +
T Consensus 5 ~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 84 (179)
T 2wfi_A 5 IKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG 84 (179)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS
T ss_pred cCCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCC
Confidence 345689999986 58999999999999999999999996 579999999999999999999986 7
Q ss_pred CCCCCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 67 TGRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 67 ~~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++++++++|+..|++|+ ..++|.++|+|||++.++++++|||||++.++|+||++|+|||+||
T Consensus 85 ~g~gg~si~g~~f~dE~-~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv 147 (179)
T 2wfi_A 85 NGRGGESIYGGFFEDES-FAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVI 147 (179)
T ss_dssp SSSCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCCCCcccCCcccccc-cCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEe
Confidence 88899999999999997 6789999999999999999999999999999999999999999997
No 21
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=9.8e-46 Score=262.51 Aligned_cols=126 Identities=49% Similarity=0.751 Sum_probs=116.2
Q ss_pred CCCCCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh--cCC--------cCCceeEEEecCcEEEcCCCC-CC
Q 032870 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSR--RGY--------YNNSKFHRIIKDFIVQGGDPT-GT 67 (131)
Q Consensus 4 ~~~~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~--~g~--------Y~g~~f~rv~~~~~iq~G~~~-~~ 67 (131)
....+++|+|+++ .|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+|||||+. ++
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 4567899999987 8999999999999999999999996 588 999999999999999999986 78
Q ss_pred CCCCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|++++++|++.|++|+ ..++|.++|+|||+++++++++|||||++.+.|+||++|+|||+|+
T Consensus 95 G~gg~si~g~~f~dE~-~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv 156 (186)
T 2poy_A 95 GTGGESIYGSKFRDEN-FVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVL 156 (186)
T ss_dssp SSCCCCTTC-CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCCCccCCCcccCcc-cccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEe
Confidence 8899999999999996 6899999999999999999999999999999999999999999997
No 22
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.1e-45 Score=259.35 Aligned_cols=125 Identities=47% Similarity=0.788 Sum_probs=117.4
Q ss_pred CCCCCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHH--hcCC-cCCceeEEEecCcEEEcCC-CCCCCCCCCcc
Q 032870 4 SDDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELS--RRGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSI 74 (131)
Q Consensus 4 ~~~~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~--~~g~-Y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~ 74 (131)
++..+++|+|+. +.|+|+||||++.||+||+||++|| +.|| |+|+.||||+|+|+||||| +.+++++++++
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 86 (172)
T 2haq_A 7 EPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSI 86 (172)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCS
T ss_pred CCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCccc
Confidence 566788999986 4799999999999999999999999 7899 9999999999999999999 55788899999
Q ss_pred cCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|++.|++|+ +.++|. +|+|||++.++++++|||||++.++++||++|+|||||+
T Consensus 87 ~g~~f~dE~-~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv 140 (172)
T 2haq_A 87 YGEKFADEN-LNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVL 140 (172)
T ss_dssp SSSCBCCCC-CCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cCCcccCcC-CCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEe
Confidence 999999995 789999 999999999999999999999999999999999999997
No 23
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.7e-45 Score=257.15 Aligned_cols=122 Identities=48% Similarity=0.791 Sum_probs=115.5
Q ss_pred CCEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCC-CCCCCCCCCcccCcc
Q 032870 8 PPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIYGHV 78 (131)
Q Consensus 8 ~~~v~l~-----ts~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~~~~ 78 (131)
+++|+|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.|||++|+|+||||| +.+++++++++|++.
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 81 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEK 81 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcc
Confidence 6788888 668999999999999999999999999 889 9999999999999999999 558889999999999
Q ss_pred CCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 79 FEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 79 ~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++|. +.++|.++|+|+|++.++++++|||||++.+.|+||++|+|||||+
T Consensus 82 ~~dE~-~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv 132 (164)
T 3pmp_A 82 FADEN-FQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVI 132 (164)
T ss_dssp BCCCC-CCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred ccccc-cccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEe
Confidence 99995 7899998999999999999999999999999999999999999997
No 24
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-45 Score=268.77 Aligned_cols=126 Identities=42% Similarity=0.726 Sum_probs=119.2
Q ss_pred CCCCCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhcC--------CcCCceeEEEecCcEEEcCCCC-CCCC
Q 032870 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRRG--------YYNNSKFHRIIKDFIVQGGDPT-GTGR 69 (131)
Q Consensus 4 ~~~~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~g--------~Y~g~~f~rv~~~~~iq~G~~~-~~~~ 69 (131)
..+.+++|+|+++ .|+|+||||++.||+||+||++||+.+ +|+|+.||||+|+|+|||||+. ++++
T Consensus 55 ~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 55 TNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp SSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred cCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 5667899999987 899999999999999999999999987 7999999999999999999985 7889
Q ss_pred CCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 70 GGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 70 ~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++++|+..|++|+ ..++|.++|+|+|++.++++++|||||++.+.++||++|+||||||
T Consensus 135 Gg~siyg~~f~dE~-~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv 194 (229)
T 1z81_A 135 GSLSIYGEKFDDEN-FDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRII 194 (229)
T ss_dssp CCCBTTBSCCCCCC-CCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEEC
T ss_pred CCCccCCCcccccc-cccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEE
Confidence 99999999999996 6899999999999999999999999999999999999999999997
No 25
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.3e-45 Score=262.31 Aligned_cols=123 Identities=49% Similarity=0.793 Sum_probs=115.1
Q ss_pred CCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCC-CCCCCCCCCcccCc
Q 032870 7 GPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIYGH 77 (131)
Q Consensus 7 ~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~~~ 77 (131)
.+++|+|++ +.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|+||||| +.+++++++++|++
T Consensus 14 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~ 93 (188)
T 3ich_A 14 VTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGE 93 (188)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBS
T ss_pred cCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCC
Confidence 356888884 68999999999999999999999995 789 9999999999999999999 56888899999999
Q ss_pred cCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 78 VFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 78 ~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
.|++|. ..++|.++|+|||++.++++++|||||++.++++||++|+|||||+
T Consensus 94 ~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv 145 (188)
T 3ich_A 94 RFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL 145 (188)
T ss_dssp CBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred cccccc-cCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEe
Confidence 999995 7899999999999999999999999999999999999999999997
No 26
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=3.7e-45 Score=255.81 Aligned_cols=122 Identities=32% Similarity=0.541 Sum_probs=110.3
Q ss_pred CCCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCC
Q 032870 6 DGPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKP 85 (131)
Q Consensus 6 ~~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~ 85 (131)
.++++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+...+. ...++..|++|..+
T Consensus 2 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--~~~~g~~~~dE~~~ 79 (166)
T 1v9t_A 2 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQ--QKKPNPPIKNEADN 79 (166)
T ss_dssp CCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCC--BCCCCCCBCCCGGG
T ss_pred CCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCC--CCCCCCcccccccc
Confidence 4678999999999999999999999999999999999999999999999999999999875432 23357789999866
Q ss_pred CCccCcccEEEEEeC-CCCCCcceEEEEcCCCCCCCCC-----ccEEEEEe
Q 032870 86 ELKHTGAGILSMANA-GPNTNGSQFFITLAPASHLDGN-----VNNIIVLL 130 (131)
Q Consensus 86 ~l~~~~~G~v~~~~~-~~~~~~sqFfI~l~~~~~ld~~-----~~vfG~Vv 130 (131)
.++|. +|+|||+++ ++++++|||||++.+.++||++ |+|||+|+
T Consensus 80 ~l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv 129 (166)
T 1v9t_A 80 GLRNT-RGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVV 129 (166)
T ss_dssp SCCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEE
T ss_pred cccCC-ceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEe
Confidence 67665 999999996 6999999999999999999998 99999997
No 27
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-45 Score=260.10 Aligned_cols=125 Identities=46% Similarity=0.794 Sum_probs=115.5
Q ss_pred CCCCCEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHh-----------cCCcCCceeEEEecCcEEEcCCCC-CC
Q 032870 5 DDGPPEVTLET-----SMGSFTVELYYKHSPRTCRNFAELSR-----------RGYYNNSKFHRIIKDFIVQGGDPT-GT 67 (131)
Q Consensus 5 ~~~~~~v~l~t-----s~G~i~ieL~~~~aP~t~~nF~~l~~-----------~g~Y~g~~f~rv~~~~~iq~G~~~-~~ 67 (131)
...+++|+|+. +.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|+|||||+. ++
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 45688999986 58999999999999999999999995 579999999999999999999986 78
Q ss_pred CCCCCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 68 GRGGDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 68 ~~~~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
+++++++|+..|++|+ ..++|.++|+|+|++.++++++|||||++.++|+||++|+|||+|+
T Consensus 96 G~gg~siyg~~f~dE~-~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv 157 (192)
T 2he9_A 96 GKGGESIYGGYFKDEN-FILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVI 157 (192)
T ss_dssp SSCCCCTTSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCCCcccCCcccCcc-ccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEE
Confidence 8899999999999996 6889999999999999999999999999999999999999999997
No 28
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=7.5e-45 Score=257.77 Aligned_cols=126 Identities=50% Similarity=0.747 Sum_probs=116.0
Q ss_pred CCCCCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhcC--C-cCCceeEEEecCcEEEcCCCC-CCCCCCCcc
Q 032870 4 SDDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRRG--Y-YNNSKFHRIIKDFIVQGGDPT-GTGRGGDSI 74 (131)
Q Consensus 4 ~~~~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~g--~-Y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~ 74 (131)
.+..+++|+|+|+ .|+|+||||++.||+||+||++||+.+ | |+|+.||||+|+|+|||||+. +++.++.++
T Consensus 18 ~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 97 (184)
T 3rdd_A 18 QGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSI 97 (184)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred ccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCccc
Confidence 3456899999998 999999999999999999999999764 4 999999999999999999954 788889999
Q ss_pred cCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|+..+++|. ..++|.++|+|+|++.++++++|||||++.+.++||++|+|||+||
T Consensus 98 ~g~~~~de~-~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv 152 (184)
T 3rdd_A 98 YGEKFEDEN-FILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVK 152 (184)
T ss_dssp TBSCBCCCC-CCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCcccCcc-cccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEe
Confidence 999999996 6889999999999999999999999999999999999999999997
No 29
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.2e-44 Score=258.25 Aligned_cols=126 Identities=46% Similarity=0.712 Sum_probs=116.4
Q ss_pred CCCCCCEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCCC-CCCCCCCCcc
Q 032870 4 SDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGDP-TGTGRGGDSI 74 (131)
Q Consensus 4 ~~~~~~~v~l~-----ts~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~~-~~~~~~~~~~ 74 (131)
+...+++|+|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|+|||||+ .+++.++.++
T Consensus 23 ~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 102 (193)
T 3k2c_A 23 AKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSI 102 (193)
T ss_dssp C--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCT
T ss_pred cccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCccc
Confidence 44567899999 458999999999999999999999998 778 99999999999999999995 4788889999
Q ss_pred cCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 75 YGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 75 ~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
|++.+++|. ..++|.++|+|+|++.++++++|||||++.+.++||++|+|||||+
T Consensus 103 ~g~~f~dE~-~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv 157 (193)
T 3k2c_A 103 YGEKFPDEN-FELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVV 157 (193)
T ss_dssp TSSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCcccccc-cccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEe
Confidence 999999995 7899999999999999999999999999999999999999999997
No 30
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=6.3e-45 Score=254.21 Aligned_cols=118 Identities=30% Similarity=0.529 Sum_probs=108.4
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCCCCcc
Q 032870 10 EVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPELKH 89 (131)
Q Consensus 10 ~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~l~~ 89 (131)
+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|+|||||+... .+.+.++..|++|..+.++|
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--~g~~~~g~~~~dE~~~~l~~ 78 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG--MKQKATKEPIKNEANNGLKN 78 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT--TEECCCCCCBCCCCCSSCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC--CCcCCCCCcccccccccccc
Confidence 4899999999999999999999999999999999999999999999999999998732 24556788999998777888
Q ss_pred CcccEEEEEeC-CCCCCcceEEEEcCCCCCCCCC--------ccEEEEEe
Q 032870 90 TGAGILSMANA-GPNTNGSQFFITLAPASHLDGN--------VNNIIVLL 130 (131)
Q Consensus 90 ~~~G~v~~~~~-~~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vv 130 (131)
. +|+|||+++ ++++++|||||++.+.++||++ |+|||+|+
T Consensus 79 ~-~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv 127 (164)
T 1lop_A 79 T-RGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVV 127 (164)
T ss_dssp C-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEE
T ss_pred C-ccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEe
Confidence 6 999999974 7999999999999999999998 99999997
No 31
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.3e-45 Score=258.92 Aligned_cols=125 Identities=48% Similarity=0.748 Sum_probs=117.6
Q ss_pred CCCCCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--C-CcCCceeEEEecCcEEEcCCCC-CCCCCCCccc
Q 032870 5 DDGPPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--G-YYNNSKFHRIIKDFIVQGGDPT-GTGRGGDSIY 75 (131)
Q Consensus 5 ~~~~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~--g-~Y~g~~f~rv~~~~~iq~G~~~-~~~~~~~~~~ 75 (131)
++.+++|+|+++ .|+|+||||++.||+||+||++||++ | +|+|+.|||++|+|+|||||+. ++++++.++|
T Consensus 9 p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~ 88 (185)
T 4fru_A 9 PKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIY 88 (185)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTT
T ss_pred CCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCcccc
Confidence 455789999987 89999999999999999999999975 6 7999999999999999999987 7888999999
Q ss_pred CccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 76 GHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 76 ~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++.+++|+ ..++|.++|+|+|++.++++++|||||++.+.++||++|+|||||+
T Consensus 89 g~~f~de~-~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv 142 (185)
T 4fru_A 89 GERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVL 142 (185)
T ss_dssp BSCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCccCccc-cccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEe
Confidence 99999996 6889999999999999999999999999999999999999999997
No 32
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=8e-45 Score=254.42 Aligned_cols=121 Identities=26% Similarity=0.419 Sum_probs=109.8
Q ss_pred CCCEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCCCCCCC
Q 032870 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFEDEIKPE 86 (131)
Q Consensus 7 ~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~e~~~~ 86 (131)
.++.|.|+|+.|+|+||||++.||+||+||++||+.+||+|+.||||+|+|+|||||+..... ...++..+++|..+.
T Consensus 2 p~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--~~~~~~~~~~E~~~~ 79 (167)
T 3s6m_A 2 PGSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLK--QKPTDAPIANEANNG 79 (167)
T ss_dssp CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTE--ECCCCCCBCCCGGGC
T ss_pred CCcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCC--CCCCCCccCCccccc
Confidence 467999999999999999999999999999999999999999999999999999999874332 234577889997777
Q ss_pred CccCcccEEEEEe-CCCCCCcceEEEEcCCCCCCCCC--------ccEEEEEe
Q 032870 87 LKHTGAGILSMAN-AGPNTNGSQFFITLAPASHLDGN--------VNNIIVLL 130 (131)
Q Consensus 87 l~~~~~G~v~~~~-~~~~~~~sqFfI~l~~~~~ld~~--------~~vfG~Vv 130 (131)
++|. +|+|||++ .++++++|||||++.+.++||++ |+|||||+
T Consensus 80 l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv 131 (167)
T 3s6m_A 80 LKND-TYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVV 131 (167)
T ss_dssp CCCC-TTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEE
T ss_pred ccCC-ccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEE
Confidence 8774 99999999 68999999999999999999998 99999997
No 33
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-45 Score=256.97 Aligned_cols=115 Identities=53% Similarity=0.827 Sum_probs=81.8
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-cCCceeEEEecCcEEEcCC-CCCCCCCCCcccCccCCCCCCCCCccC
Q 032870 15 TSMGSFTVELYYKHSPRTCRNFAELSR--RGY-YNNSKFHRIIKDFIVQGGD-PTGTGRGGDSIYGHVFEDEIKPELKHT 90 (131)
Q Consensus 15 ts~G~i~ieL~~~~aP~t~~nF~~l~~--~g~-Y~g~~f~rv~~~~~iq~G~-~~~~~~~~~~~~~~~~~~e~~~~l~~~ 90 (131)
|+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|+||||| +.+++++++++|++.|++|+ +.++|.
T Consensus 19 T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~~~h~ 97 (172)
T 2c3b_A 19 TKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADEN-FSRKHD 97 (172)
T ss_dssp CEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHHHH
T ss_pred cccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCcc-cccccC
Confidence 456999999999999999999999999 778 9999999999999999999 67888899999999999995 788899
Q ss_pred cccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 91 GAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 91 ~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++|+|+|++.++++++|||||++.++|+||++|+|||||+
T Consensus 98 ~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv 137 (172)
T 2c3b_A 98 KKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVA 137 (172)
T ss_dssp HTCEEEEC---------CEEEECSCCTTCCSCCEEEEEEC
T ss_pred CCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEE
Confidence 9999999999999999999999999999999999999997
No 34
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.7e-44 Score=275.76 Aligned_cols=122 Identities=48% Similarity=0.797 Sum_probs=117.2
Q ss_pred CCEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--------C---CcCCceeEEEecCcEEEcCCCC-CCCCC
Q 032870 8 PPEVTLETS-----MGSFTVELYYKHSPRTCRNFAELSRR--------G---YYNNSKFHRIIKDFIVQGGDPT-GTGRG 70 (131)
Q Consensus 8 ~~~v~l~ts-----~G~i~ieL~~~~aP~t~~nF~~l~~~--------g---~Y~g~~f~rv~~~~~iq~G~~~-~~~~~ 70 (131)
+++|+|+|+ .|+|+||||++.||+||+||++||++ | ||+|+.||||+|+|+|||||+. ++|++
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 789999998 89999999999999999999999997 6 6999999999999999999998 88999
Q ss_pred CCcccCccCCCCCCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 71 GDSIYGHVFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 71 ~~~~~~~~~~~e~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
++++|+..|++|+ ..++|.++|+|+|++.++++++|||||++.+.|+||++|+|||+|+
T Consensus 95 ~~~~~~~~~~~e~-~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~ 153 (370)
T 1ihg_A 95 GESIYGEKFEDEN-FHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVI 153 (370)
T ss_dssp CCBTTBSCBCCCC-CCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEE
T ss_pred CCCCCCCCcCCCc-CCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEe
Confidence 9999999999996 6889999999999999999999999999999999999999999997
No 35
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.2e-43 Score=259.54 Aligned_cols=125 Identities=24% Similarity=0.439 Sum_probs=111.0
Q ss_pred CCCCCCCEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc-----------------C--C-cCCceeEEEecCc
Q 032870 3 ASDDGPPEVTLE-----TSMGSFTVELYYKHSPRTCRNFAELSRR-----------------G--Y-YNNSKFHRIIKDF 57 (131)
Q Consensus 3 ~~~~~~~~v~l~-----ts~G~i~ieL~~~~aP~t~~nF~~l~~~-----------------g--~-Y~g~~f~rv~~~~ 57 (131)
..+..+++|+|+ |+.|+|+||||++.||+||+||++||++ | | |+|+.||||+++|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 355678999999 8999999999999999999999999984 5 7 9999999999999
Q ss_pred EEEcCCC-CCCCCCCCcccCcc-----CCCCCCCCCccCcccEEEEEe----CCCCCCcceEEEEcCC------CCCCCC
Q 032870 58 IVQGGDP-TGTGRGGDSIYGHV-----FEDEIKPELKHTGAGILSMAN----AGPNTNGSQFFITLAP------ASHLDG 121 (131)
Q Consensus 58 ~iq~G~~-~~~~~~~~~~~~~~-----~~~e~~~~l~~~~~G~v~~~~----~~~~~~~sqFfI~l~~------~~~ld~ 121 (131)
||||||+ .++|++++++|+.. |+ | +.++|.++|+||||+ +++++++|||||++.+ .++||+
T Consensus 89 miQgGd~~~g~G~Gg~siyg~~~~p~~f~-~--~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg 165 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGTVYCDEPIPPVFG-D--YFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDR 165 (234)
T ss_dssp EEEECCCC----CCCCCTTTTCCBCCCCC-S--CCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCT
T ss_pred EEEcCCccCCCCCCCccccCCccCccccc-C--cCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCC
Confidence 9999994 68889999999887 65 3 578998899999999 8999999999999999 999999
Q ss_pred CccEEEEEe
Q 032870 122 NVNNIIVLL 130 (131)
Q Consensus 122 ~~~vfG~Vv 130 (131)
+|+|||+||
T Consensus 166 ~~tVFG~Vv 174 (234)
T 2ose_A 166 DQVVIGQVY 174 (234)
T ss_dssp TSEEEEEEE
T ss_pred CeeEEEEEe
Confidence 999999997
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=8.4e-41 Score=256.91 Aligned_cols=124 Identities=27% Similarity=0.445 Sum_probs=110.1
Q ss_pred CCCCEEEEEec--------ceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEEecCcEEEcCCCCCCCCC-------
Q 032870 6 DGPPEVTLETS--------MGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRIIKDFIVQGGDPTGTGRG------- 70 (131)
Q Consensus 6 ~~~~~v~l~ts--------~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~------- 70 (131)
.+++.|.|+|+ .|+|+||||++.||+||+||++||+.|||+|+.|||| ++|+|||||+.+++++
T Consensus 168 ~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g 246 (369)
T 3rfy_A 168 KGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTE 246 (369)
T ss_dssp CSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCC
T ss_pred CCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccC
Confidence 45678999997 8999999999999999999999999999999999999 9999999999876655
Q ss_pred --------------CCcccCccCCCCC----CCCCccCcccEEEEEeC--CCCCCcceEEEEc-------CCCCCCCCCc
Q 032870 71 --------------GDSIYGHVFEDEI----KPELKHTGAGILSMANA--GPNTNGSQFFITL-------APASHLDGNV 123 (131)
Q Consensus 71 --------------~~~~~~~~~~~e~----~~~l~~~~~G~v~~~~~--~~~~~~sqFfI~l-------~~~~~ld~~~ 123 (131)
+.++|+..+++|. .+.++|+.+|+|+|+++ ++++++|||||++ .+.++||++|
T Consensus 247 ~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgky 326 (369)
T 3rfy_A 247 KTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRY 326 (369)
T ss_dssp CCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCE
T ss_pred cCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCe
Confidence 3456666676653 34778888999999997 8999999999999 4789999999
Q ss_pred cEEEEEe
Q 032870 124 NNIIVLL 130 (131)
Q Consensus 124 ~vfG~Vv 130 (131)
+|||+||
T Consensus 327 tVFG~Vv 333 (369)
T 3rfy_A 327 AVFGYVT 333 (369)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999997
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=93.29 E-value=0.13 Score=34.79 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=30.4
Q ss_pred CCCEEEEEecceeEEEEEcCCCChHHHHHHHHHH
Q 032870 7 GPPEVTLETSMGSFTVELYYKHSPRTCRNFAELS 40 (131)
Q Consensus 7 ~~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~ 40 (131)
...++.|......++++|+.+.||+||+.|+++.
T Consensus 28 ~~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 28 VEMRLRIRFESAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp SCCCEEEEETTEEEEECCCTTSCHHHHHHHHHTC
T ss_pred CCeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhC
Confidence 3567888888889999999999999999999986
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=87.75 E-value=1 Score=31.24 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=25.8
Q ss_pred CEEEEEecce--eEEEEEcCCCChHHHHHHHHHH
Q 032870 9 PEVTLETSMG--SFTVELYYKHSPRTCRNFAELS 40 (131)
Q Consensus 9 ~~v~l~ts~G--~i~ieL~~~~aP~t~~nF~~l~ 40 (131)
..+.+....+ .++.+|..+.||+||+.|.++.
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhC
Confidence 4566666655 4788999999999999999976
No 39
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=79.10 E-value=0.57 Score=21.23 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=13.6
Q ss_pred HHHHHHHHhcCCcCCc
Q 032870 33 CRNFAELSRRGYYNNS 48 (131)
Q Consensus 33 ~~nF~~l~~~g~Y~g~ 48 (131)
-+||.+-.+.|||+|-
T Consensus 3 wknfwsslrkgfydge 18 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHhhcccch
Confidence 3689999999999984
No 40
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=72.25 E-value=18 Score=23.68 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=56.9
Q ss_pred CCEEEEEecceeEEEEEcCCCChHHHHHHHHHH----hcCCcCCceeEEEecCcEEEcCCCCCCCCCCCcccCccCCC-C
Q 032870 8 PPEVTLETSMGSFTVELYYKHSPRTCRNFAELS----RRGYYNNSKFHRIIKDFIVQGGDPTGTGRGGDSIYGHVFED-E 82 (131)
Q Consensus 8 ~~~v~l~ts~G~i~ieL~~~~aP~t~~nF~~l~----~~g~Y~g~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~-e 82 (131)
..+|.+-.....+..+|+.+ |.|++.|.+.. +-..|. ..++=..|-. .+. |
T Consensus 12 ~~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~---------------------l~~~e 67 (136)
T 1zx8_A 12 HMRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFSTPVN---------------------VQKME 67 (136)
T ss_dssp EEEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEECSCC---------------------CCCCS
T ss_pred eeEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEECCcc---------------------CCCCC
Confidence 45788888889999999754 88999999987 222343 3333332211 111 2
Q ss_pred CCCCCccCcccEEEEEeCCCCCCcceEEEEcCCCCCCCC------CccEEEEEe
Q 032870 83 IKPELKHTGAGILSMANAGPNTNGSQFFITLAPASHLDG------NVNNIIVLL 130 (131)
Q Consensus 83 ~~~~l~~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~------~~~vfG~Vv 130 (131)
+ .... ...|.|+.-..+. -+.|-.++.|...+ ..+++|||.
T Consensus 68 ~-~~~~-~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~ 114 (136)
T 1zx8_A 68 N-PREV-VEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIV 114 (136)
T ss_dssp S-EESS-BCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEE
T ss_pred C-CCcc-CCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEc
Confidence 1 1222 2478888766543 47777887754433 367899985
No 41
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=69.62 E-value=4.5 Score=31.20 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=34.3
Q ss_pred cCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 89 HTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 89 ~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
..++|.|.+.++....-..+.-|++.|.| -|++..|+|+|+
T Consensus 325 ~r~rGdItIdN~~ygRY~GElQI~l~dlp-~d~r~NVVG~I~ 365 (385)
T 1x7f_A 325 LQERGQVVIGNNSFGKYKGELQIILKEMP-IDERKNIVGTIA 365 (385)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEECSCBC-CCTTEEEEEEEC
T ss_pred cccCCcEEEeCCCccccccEeeEEcccCC-CCCCeeEEEEEC
Confidence 35699999999766666678999999987 488899999996
No 42
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=67.96 E-value=4.1 Score=31.23 Aligned_cols=41 Identities=20% Similarity=0.245 Sum_probs=34.6
Q ss_pred cCcccEEEEEeCCCCCCcceEEEEcCCCCCCCCCccEEEEEe
Q 032870 89 HTGAGILSMANAGPNTNGSQFFITLAPASHLDGNVNNIIVLL 130 (131)
Q Consensus 89 ~~~~G~v~~~~~~~~~~~sqFfI~l~~~~~ld~~~~vfG~Vv 130 (131)
..++|.|.+.+.....-..+.-|++.|.| -|++..|+|+|+
T Consensus 299 ~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~ 339 (372)
T 2p0o_A 299 ARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRII 339 (372)
T ss_dssp CBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBC
T ss_pred cccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEEC
Confidence 35699999999766666678999999998 588999999986
No 43
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=54.49 E-value=6.9 Score=17.97 Aligned_cols=14 Identities=50% Similarity=0.695 Sum_probs=9.9
Q ss_pred CCCcceEEEEcCCC
Q 032870 103 NTNGSQFFITLAPA 116 (131)
Q Consensus 103 ~~~~sqFfI~l~~~ 116 (131)
..-.|..||+|.+.
T Consensus 7 KR~aSSvFITLapp 20 (26)
T 2k9u_B 7 KRVASSVFITLAPP 20 (26)
T ss_dssp SSCEEEEEEEECCS
T ss_pred hheeeeEEEEecCc
Confidence 34467799999763
No 44
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=38.17 E-value=44 Score=19.78 Aligned_cols=38 Identities=18% Similarity=0.138 Sum_probs=28.1
Q ss_pred EEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEE
Q 032870 13 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRI 53 (131)
Q Consensus 13 l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv 53 (131)
-.++.|++.|++-+ .+..++.|++.|+.+-=. +.+.++
T Consensus 35 ~N~~dG~Vei~~eG--~~~~i~~f~~~l~~~~p~-a~V~~v 72 (91)
T 2fhm_A 35 KNRDDGRVEILAEG--PENALQSFVEAVKNGSPF-SKVTDI 72 (91)
T ss_dssp EECTTSCEEEEEEE--CHHHHHHHHHHHHTTCSS-SEEEEE
T ss_pred EECCCCcEEEEEEe--CHHHHHHHHHHHHhCCCc-cEEEEE
Confidence 45678999999876 466799999999876422 555555
No 45
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=37.78 E-value=28 Score=22.17 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=22.7
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHHHhcC
Q 032870 14 ETSMGSFTVELYYKHSPRTCRNFAELSRRG 43 (131)
Q Consensus 14 ~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g 43 (131)
.++.|++.|++-++ +..++.|++.|+.|
T Consensus 68 N~~dG~Vei~~eG~--~~~v~~f~~~l~~g 95 (121)
T 2lxf_A 68 NNEDGSVSGVVQGP--KEQVDAFVKYLHKG 95 (121)
T ss_dssp ECTTSCEEEEEEEE--HHHHHHHHHHHHHC
T ss_pred ECCCCCEEEEEEEC--HHHHHHHHHHHHhC
Confidence 34579999988764 78899999999875
No 46
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=31.06 E-value=71 Score=18.73 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=23.1
Q ss_pred EEecceeEEEEEcCCCChHHHHHHHHHHhcC
Q 032870 13 LETSMGSFTVELYYKHSPRTCRNFAELSRRG 43 (131)
Q Consensus 13 l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g 43 (131)
..++.|++.|++-+ .+..++.|++.++.+
T Consensus 35 ~N~~dG~Vei~~eG--~~~~i~~f~~~l~~g 63 (88)
T 1ulr_A 35 ENLPDGRVEVVAEG--PKEALELFLHHLKQG 63 (88)
T ss_dssp EECTTSCEEEEEES--CHHHHHHHHHHHHHC
T ss_pred EECCCCcEEEEEEe--CHHHHHHHHHHHHhC
Confidence 35678999888876 566799999999854
No 47
>3ee7_A Replicase polyprotein 1A; GXXXG, dimerization, SARS-COV, helix-helix, hydrolase, membr metal-binding, protease, RNA-binding, thiol protease; 2.60A {Sars coronavirus} SCOP: b.140.1.1 PDB: 1qz8_A
Probab=29.82 E-value=37 Score=21.59 Aligned_cols=23 Identities=17% Similarity=0.066 Sum_probs=13.3
Q ss_pred CCCCCCEEEEEecc--eeEEEEEcC
Q 032870 4 SDDGPPEVTLETSM--GSFTVELYY 26 (131)
Q Consensus 4 ~~~~~~~v~l~ts~--G~i~ieL~~ 26 (131)
+.+.-..|.++.+. |.++|||.+
T Consensus 47 d~~~LK~vk~e~d~G~g~v~iELeP 71 (121)
T 3ee7_A 47 DHQDLKWARFPKSDGTGTIYTELEP 71 (121)
T ss_dssp SCSCCCEEEECCC--CEEEEEEBCC
T ss_pred CCCCceEEEEEecCCCCeEEEecCC
Confidence 34444566666666 677777754
No 48
>1uw7_A NSP9; viral protein, replicase protein, RNA-binding; 2.8A {Sars coronavirus hku-39849} SCOP: b.140.1.1
Probab=29.05 E-value=47 Score=21.76 Aligned_cols=23 Identities=17% Similarity=0.066 Sum_probs=13.6
Q ss_pred CCCCCCEEEEEecce--eEEEEEcC
Q 032870 4 SDDGPPEVTLETSMG--SFTVELYY 26 (131)
Q Consensus 4 ~~~~~~~v~l~ts~G--~i~ieL~~ 26 (131)
+.+.-..|.++++.| .++|||.+
T Consensus 77 d~~~LK~vk~e~d~G~g~v~iELeP 101 (143)
T 1uw7_A 77 DHQDLKWARFPKSDGTGTIYTELEP 101 (143)
T ss_dssp SCSCCCEEEEECTTSSCEEEEEBCC
T ss_pred CCCCceEEEEEecCCceEEEEecCC
Confidence 344445666666644 67777754
No 49
>2j97_A Replicase polyprotein 1AB; SSB, zinc, HCOV, membrane, helicase, SARS COV, viral replicase, RNA replication, ATP-binding; 1.75A {Human coronavirus 229E} PDB: 2j98_A 2j98_B
Probab=28.99 E-value=19 Score=22.55 Aligned_cols=22 Identities=36% Similarity=0.294 Sum_probs=14.0
Q ss_pred CCCCCEEEEEecceeEEEEEcC
Q 032870 5 DDGPPEVTLETSMGSFTVELYY 26 (131)
Q Consensus 5 ~~~~~~v~l~ts~G~i~ieL~~ 26 (131)
.+.-..|.++.+.|.++|||.+
T Consensus 46 ~~~LK~vk~e~d~g~v~iELeP 67 (109)
T 2j97_A 46 KPGMKYVKWEHDSGVVTVELEP 67 (109)
T ss_dssp CSCEEEEEECCSSSCEEEEBCC
T ss_pred CCCceEEEEEccCCEEEEEcCC
Confidence 3344566666677777777754
No 50
>3bbd_A Ribosome biogenesis protein NEP1-like; methyltransferase, S-adenosyl-methionin adenosyl-homocysteine, rRNA processing; HET: MSE SAH; 2.15A {Methanocaldococcus jannaschii} SCOP: c.116.1.6 PDB: 3bbe_A 3bbh_A*
Probab=28.97 E-value=64 Score=22.49 Aligned_cols=48 Identities=8% Similarity=0.144 Sum_probs=34.6
Q ss_pred CCEEEEEecceeEEEEEcCC-CChHHHHHHHHHHhcCCcCC-ceeEEEecC
Q 032870 8 PPEVTLETSMGSFTVELYYK-HSPRTCRNFAELSRRGYYNN-SKFHRIIKD 56 (131)
Q Consensus 8 ~~~v~l~ts~G~i~ieL~~~-~aP~t~~nF~~l~~~g~Y~g-~~f~rv~~~ 56 (131)
.-+|+++|-.|. +|++.++ -.|+|-++|..|..+=+.++ ...-|++++
T Consensus 75 ~L~VYIhT~~~~-lI~V~P~~RiPRty~rF~gLM~qLL~~~~~~Llkvik~ 124 (205)
T 3bbd_A 75 KLNIYIHTYDDK-VLKINPETRLPRNYFRFLGVMEKVLKGERNHLIKMEEK 124 (205)
T ss_dssp CEEEEEEETTSE-EEEECTTCCCCSSHHHHHHHHHHHHTTCCCSSEEEEEC
T ss_pred CeEEEEEecCCE-EEEECCCCCCCCCHHHHHHHHHHHHHhCchhheEEEcC
Confidence 347999998886 6889888 68999999998886433333 345555543
No 51
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=27.41 E-value=53 Score=19.86 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=23.3
Q ss_pred EEecceeEEEEEcCCCChHHHHHHHHHHhcC
Q 032870 13 LETSMGSFTVELYYKHSPRTCRNFAELSRRG 43 (131)
Q Consensus 13 l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g 43 (131)
-.++.|++.|++-++ +..++.|++.++.+
T Consensus 45 rN~~dG~Vei~~eG~--~~~l~~f~~~l~~g 73 (98)
T 3trg_A 45 KNLSHGDVELVACGE--RDSIMILTEWLWEG 73 (98)
T ss_dssp EECTTSCEEEEEEEE--HHHHHHHHHHTTTC
T ss_pred EECCCCEEEEEEEEC--HHHHHHHHHHHHhC
Confidence 456789899988764 78899999999864
No 52
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=25.68 E-value=93 Score=18.78 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=26.3
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHHHh-cCCcCCceeEEE
Q 032870 14 ETSMGSFTVELYYKHSPRTCRNFAELSR-RGYYNNSKFHRI 53 (131)
Q Consensus 14 ~ts~G~i~ieL~~~~aP~t~~nF~~l~~-~g~Y~g~~f~rv 53 (131)
.++.|++.|++-+ .+..++.|++.|+ .+- ..+.+.++
T Consensus 45 N~~dG~Vei~~eG--~~~~l~~f~~~l~~~gP-~~a~V~~v 82 (102)
T 1urr_A 45 NTRDGTVKGQLEA--PMMNLMEMKHWLENNRI-PNAKVSKA 82 (102)
T ss_dssp ECTTSCEEEEEEE--CHHHHHHHHHHHHHCCS-TTCEEEEE
T ss_pred ECCCCCEEEEEEc--CHHHHHHHHHHHHhcCC-CccEEEEE
Confidence 4568999999876 4677999999997 442 24455554
No 53
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=24.85 E-value=77 Score=18.17 Aligned_cols=16 Identities=38% Similarity=0.690 Sum_probs=12.7
Q ss_pred CCEEEEEecceeEEEE
Q 032870 8 PPEVTLETSMGSFTVE 23 (131)
Q Consensus 8 ~~~v~l~ts~G~i~ie 23 (131)
...+.++|+.|.+.|.
T Consensus 20 ~e~i~L~T~~G~L~Ik 35 (71)
T 2ks0_A 20 PKEILLETIQGVLSIK 35 (71)
T ss_dssp SSEEEEEETTEEEEEE
T ss_pred CCEEEEEeCceEEEEE
Confidence 3578888998888876
No 54
>3oii_A Essential for mitotic growth 1; EMG1, scnep1, spout, ribosome biogenesis, methyltransferase, processing, ribosomal protein; HET: SAH; 1.85A {Saccharomyces cerevisiae} PDB: 3oij_A* 3oin_A* 2v3j_A 2v3k_A*
Probab=23.79 E-value=78 Score=22.87 Aligned_cols=48 Identities=29% Similarity=0.378 Sum_probs=34.5
Q ss_pred CCEEEEEecceeEEEEEcCC-CChHHHHHHHHHHhcCCc------CC--ceeEEEecC
Q 032870 8 PPEVTLETSMGSFTVELYYK-HSPRTCRNFAELSRRGYY------NN--SKFHRIIKD 56 (131)
Q Consensus 8 ~~~v~l~ts~G~i~ieL~~~-~aP~t~~nF~~l~~~g~Y------~g--~~f~rv~~~ 56 (131)
.-+|+++|-.|. +|++.+. -.|+|-++|..|..+=+. .+ ...-+++++
T Consensus 110 ~L~VYIhT~~~~-lIeV~P~~RiPRty~rF~GLM~qLL~k~~I~~~~~~~~LLkvikn 166 (253)
T 3oii_A 110 KLQVYIQTSRGI-LIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKN 166 (253)
T ss_dssp CEEEEEEETTSC-EEEECTTCCCCSSHHHHHHHHHHHHHHSEEEETTEEEEEEEEECS
T ss_pred ceEEEEEecCCE-EEEECCCCCCCCCHHHHHHHHHHHHhcCcccCCCCCCeeEEEEcC
Confidence 347999998887 6888888 689999999988853221 11 356666654
No 55
>1pch_A Phosphocarrier protein; phosphotransferase; 1.80A {Mycoplasma capricolum} SCOP: d.94.1.1
Probab=22.88 E-value=1.1e+02 Score=17.92 Aligned_cols=31 Identities=6% Similarity=0.090 Sum_probs=25.7
Q ss_pred ce-eEEEEEcCCCChHHHHHHHHHHh-cCCcCC
Q 032870 17 MG-SFTVELYYKHSPRTCRNFAELSR-RGYYNN 47 (131)
Q Consensus 17 ~G-~i~ieL~~~~aP~t~~nF~~l~~-~g~Y~g 47 (131)
.| .|.|...++.+-.+.+.+.+|++ .++|.|
T Consensus 56 ~G~~i~i~a~G~De~~Al~~l~~l~~~~~~~~~ 88 (88)
T 1pch_A 56 TGTEITIQADGNDADQAIQAIKQTMIDTALIQG 88 (88)
T ss_dssp TTCEEEEEEESTTHHHHHHHHHHHHHHTTSSCC
T ss_pred CCCEEEEEEeCCCHHHHHHHHHHHHHhCCcccC
Confidence 55 59999999999999999999885 567875
No 56
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=21.59 E-value=1.3e+02 Score=17.63 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=28.3
Q ss_pred EEecceeEEEEEcCCCChHHHHHHHHHH-hcCCcCCceeEEE
Q 032870 13 LETSMGSFTVELYYKHSPRTCRNFAELS-RRGYYNNSKFHRI 53 (131)
Q Consensus 13 l~ts~G~i~ieL~~~~aP~t~~nF~~l~-~~g~Y~g~~f~rv 53 (131)
..++.|++.|++-+ .+..++.|++.| +.+ -..+.+.++
T Consensus 37 ~N~~dG~Vei~~eG--~~~~i~~f~~~l~~~g-P~~a~V~~v 75 (92)
T 2gv1_A 37 KNLDDGSVEVVACG--EEGQVEKLMQWLKSGG-PRSARVERV 75 (92)
T ss_dssp EECSSSCEEEEECS--CHHHHHHHHHHHHHTS-STTSEEEEE
T ss_pred EECCCCcEEEEEEe--CHHHHHHHHHHhhccC-CCceEEEEE
Confidence 45678989888865 567799999999 777 445555555
No 57
>1rji_A BMKX, potassium channel toxin KX; 3-10 helix, beta sheet; NMR {Synthetic} SCOP: g.3.7.2 PDB: 1wt8_A
Probab=21.17 E-value=24 Score=16.59 Aligned_cols=9 Identities=22% Similarity=0.674 Sum_probs=6.2
Q ss_pred HhcCCcCCc
Q 032870 40 SRRGYYNNS 48 (131)
Q Consensus 40 ~~~g~Y~g~ 48 (131)
|+++||.++
T Consensus 22 ck~~y~q~c 30 (31)
T 1rji_A 22 CKNGYCQGC 30 (31)
T ss_dssp BCSSBBSCC
T ss_pred Ecceeeccc
Confidence 467777765
No 58
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=20.98 E-value=85 Score=18.54 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=26.3
Q ss_pred EEecceeEEEEEcCCCChHHHHHHHHHHhcCCcCCceeEEE
Q 032870 13 LETSMGSFTVELYYKHSPRTCRNFAELSRRGYYNNSKFHRI 53 (131)
Q Consensus 13 l~ts~G~i~ieL~~~~aP~t~~nF~~l~~~g~Y~g~~f~rv 53 (131)
-.++.|++.|++-+ .+..++.|++.|+.+- ..+.+.++
T Consensus 37 ~N~~dG~Vei~~~G--~~~~v~~f~~~l~~gP-~~a~V~~v 74 (91)
T 1w2i_A 37 RNLPDGSVEAVLEG--DEERVEALIGWAHQGP-PLARVTRV 74 (91)
T ss_dssp EECTTSCEEEEEEE--EHHHHHHHHHHTTTCS-TTCEEEEE
T ss_pred EECCCCCEEEEEEe--CHHHHHHHHHHHHhCC-CCcEEEEE
Confidence 35678999888875 4667999999998542 23444444
Done!