Query 032873
Match_columns 131
No_of_seqs 201 out of 1042
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 11:08:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032873.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032873hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4k_A N5-carboxyaminoimidazol 100.0 1.2E-32 4E-37 215.5 6.7 77 55-131 19-95 (181)
2 2h31_A Multifunctional protein 100.0 2.8E-32 9.6E-37 235.1 6.4 117 6-131 222-339 (425)
3 4grd_A N5-CAIR mutase, phospho 100.0 9E-32 3.1E-36 209.3 7.1 77 55-131 9-85 (173)
4 1xmp_A PURE, phosphoribosylami 100.0 8.4E-31 2.9E-35 203.4 6.4 75 57-131 10-84 (170)
5 3trh_A Phosphoribosylaminoimid 100.0 1.3E-30 4.6E-35 202.1 7.2 74 58-131 6-79 (169)
6 3kuu_A Phosphoribosylaminoimid 100.0 1.4E-30 4.7E-35 202.8 7.2 77 55-131 9-85 (174)
7 3ors_A N5-carboxyaminoimidazol 100.0 1E-30 3.5E-35 201.8 6.4 74 58-131 3-76 (163)
8 3oow_A Phosphoribosylaminoimid 100.0 9.6E-31 3.3E-35 202.4 6.1 75 57-131 4-78 (166)
9 3rg8_A Phosphoribosylaminoimid 100.0 2E-30 6.8E-35 199.4 7.4 74 58-131 2-76 (159)
10 1u11_A PURE (N5-carboxyaminoim 100.0 1.5E-30 5.2E-35 203.8 6.6 74 58-131 21-94 (182)
11 3lp6_A Phosphoribosylaminoimid 100.0 1.5E-30 5.1E-35 202.6 6.5 75 57-131 6-80 (174)
12 1o4v_A Phosphoribosylaminoimid 100.0 4E-30 1.4E-34 201.5 6.1 73 59-131 14-86 (183)
13 2ywx_A Phosphoribosylaminoimid 99.9 3.7E-28 1.3E-32 186.5 5.2 69 60-131 1-69 (157)
14 3uhj_A Probable glycerol dehyd 95.2 0.026 9E-07 47.1 5.5 66 59-125 53-118 (387)
15 1jq5_A Glycerol dehydrogenase; 94.9 0.036 1.2E-06 45.2 5.3 67 59-125 32-98 (370)
16 3bfj_A 1,3-propanediol oxidore 94.3 0.071 2.4E-06 43.8 5.8 67 59-125 34-104 (387)
17 1o2d_A Alcohol dehydrogenase, 93.8 0.15 5.3E-06 41.7 6.8 67 59-125 41-110 (371)
18 3okf_A 3-dehydroquinate syntha 93.6 0.22 7.4E-06 42.1 7.6 67 59-125 63-135 (390)
19 3ce9_A Glycerol dehydrogenase; 93.2 0.13 4.3E-06 41.7 5.3 65 60-125 36-100 (354)
20 3ox4_A Alcohol dehydrogenase 2 93.1 0.11 3.7E-06 43.0 4.9 67 59-125 32-100 (383)
21 1rrm_A Lactaldehyde reductase; 92.4 0.12 4E-06 42.3 4.1 66 60-125 33-100 (386)
22 1ta9_A Glycerol dehydrogenase; 92.3 0.12 4E-06 44.1 4.1 65 60-125 93-157 (450)
23 1vlj_A NADH-dependent butanol 92.2 0.34 1.2E-05 40.1 6.8 65 59-125 44-113 (407)
24 1sg6_A Pentafunctional AROM po 92.2 0.26 9.1E-06 40.8 6.1 67 59-125 37-117 (393)
25 3s99_A Basic membrane lipoprot 90.5 1.4 4.6E-05 36.1 8.7 65 57-121 25-94 (356)
26 3zyw_A Glutaredoxin-3; metal b 90.2 1.4 4.7E-05 30.1 7.2 57 60-118 17-77 (111)
27 3l49_A ABC sugar (ribose) tran 90.1 3 0.0001 30.8 9.6 64 57-122 4-70 (291)
28 3h5o_A Transcriptional regulat 89.9 2.5 8.7E-05 32.5 9.4 62 58-121 62-126 (339)
29 3ipz_A Monothiol glutaredoxin- 89.6 1.6 5.5E-05 29.4 7.1 57 60-118 19-79 (109)
30 3dbi_A Sugar-binding transcrip 89.3 3.8 0.00013 31.3 9.9 102 13-122 22-128 (338)
31 1oj7_A Hypothetical oxidoreduc 89.1 0.41 1.4E-05 39.6 4.5 63 59-125 51-118 (408)
32 3egc_A Putative ribose operon 89.1 3.8 0.00013 30.4 9.5 64 57-122 7-73 (291)
33 3hl0_A Maleylacetate reductase 89.0 0.43 1.5E-05 39.2 4.5 64 60-125 36-99 (353)
34 2gru_A 2-deoxy-scyllo-inosose 88.4 1.7 5.9E-05 35.5 7.8 65 59-124 35-105 (368)
35 3kjx_A Transcriptional regulat 88.2 3.7 0.00013 31.6 9.2 62 58-121 68-132 (344)
36 3eth_A Phosphoribosylaminoimid 88.2 0.21 7.3E-06 40.9 2.2 37 2-42 305-341 (355)
37 1aba_A Glutaredoxin; electron 87.9 1.6 5.6E-05 27.7 6.0 43 70-112 13-58 (87)
38 3jzd_A Iron-containing alcohol 87.5 0.58 2E-05 38.5 4.4 64 60-125 38-101 (358)
39 3qbe_A 3-dehydroquinate syntha 87.3 0.93 3.2E-05 37.8 5.6 66 59-125 44-115 (368)
40 3o1i_D Periplasmic protein TOR 87.0 5.4 0.00018 29.5 9.2 67 57-125 4-75 (304)
41 3e3m_A Transcriptional regulat 86.9 5.3 0.00018 30.9 9.4 62 58-121 70-134 (355)
42 3lft_A Uncharacterized protein 86.8 4.7 0.00016 30.3 8.9 62 59-121 3-70 (295)
43 3msz_A Glutaredoxin 1; alpha-b 86.2 0.77 2.6E-05 28.4 3.5 50 60-111 5-54 (89)
44 3m9w_A D-xylose-binding peripl 86.2 8.7 0.0003 28.8 10.1 63 59-123 3-68 (313)
45 1xah_A Sadhqs, 3-dehydroquinat 85.9 0.76 2.6E-05 37.3 4.2 64 60-125 33-102 (354)
46 1nvm_A HOA, 4-hydroxy-2-oxoval 85.5 2.1 7.1E-05 34.8 6.7 62 61-123 109-171 (345)
47 2o20_A Catabolite control prot 85.1 8.6 0.00029 29.3 9.7 63 57-121 62-127 (332)
48 3jy6_A Transcriptional regulat 85.0 9 0.00031 28.1 9.5 64 57-122 6-72 (276)
49 3dlo_A Universal stress protei 85.0 3.5 0.00012 28.6 6.9 54 73-128 79-132 (155)
50 3gx8_A Monothiol glutaredoxin- 84.9 3.7 0.00013 28.4 6.9 58 60-119 17-81 (121)
51 2wem_A Glutaredoxin-related pr 84.9 4.5 0.00015 28.1 7.4 57 60-118 21-82 (118)
52 3ctp_A Periplasmic binding pro 84.8 7.2 0.00025 29.8 9.1 61 58-121 60-123 (330)
53 3lkv_A Uncharacterized conserv 84.7 4.4 0.00015 31.3 8.0 66 57-122 7-78 (302)
54 1dbq_A Purine repressor; trans 84.6 9.8 0.00033 27.9 9.5 63 58-122 7-72 (289)
55 3l6u_A ABC-type sugar transpor 83.7 11 0.00037 27.7 10.2 65 57-123 7-74 (293)
56 3jvd_A Transcriptional regulat 83.6 6.9 0.00024 30.1 8.7 62 57-121 63-127 (333)
57 1byk_A Protein (trehalose oper 83.6 10 0.00036 27.3 9.7 61 59-121 3-66 (255)
58 2hqb_A Transcriptional activat 83.6 7.7 0.00026 29.7 8.9 61 59-121 6-71 (296)
59 1tjy_A Sugar transport protein 83.4 12 0.0004 28.5 9.8 64 59-124 4-71 (316)
60 2fn9_A Ribose ABC transporter, 83.2 12 0.0004 27.6 9.9 62 59-122 3-67 (290)
61 1wik_A Thioredoxin-like protei 83.2 3.5 0.00012 27.4 6.0 57 60-118 16-76 (109)
62 3miz_A Putative transcriptiona 82.9 8.8 0.0003 28.6 8.8 63 57-121 12-78 (301)
63 2iks_A DNA-binding transcripti 82.9 12 0.00042 27.7 9.7 64 57-122 19-85 (293)
64 1ujn_A Dehydroquinate synthase 82.9 0.97 3.3E-05 36.8 3.6 61 59-124 29-95 (348)
65 2yan_A Glutaredoxin-3; oxidore 82.7 5.9 0.0002 25.9 6.9 57 60-118 18-78 (105)
66 3c3k_A Alanine racemase; struc 82.6 10 0.00035 28.0 9.0 64 57-122 7-73 (285)
67 3uug_A Multiple sugar-binding 82.3 10 0.00035 28.5 9.0 63 58-122 3-68 (330)
68 3bil_A Probable LACI-family tr 82.1 6.7 0.00023 30.4 8.1 62 58-121 66-130 (348)
69 3hs3_A Ribose operon repressor 81.7 14 0.00047 27.3 10.0 63 57-121 9-75 (277)
70 3h75_A Periplasmic sugar-bindi 81.6 14 0.00049 28.2 9.8 61 59-121 4-70 (350)
71 3kke_A LACI family transcripti 81.4 11 0.00036 28.3 8.8 63 58-122 15-80 (303)
72 2wci_A Glutaredoxin-4; redox-a 81.3 5.6 0.00019 28.3 6.8 57 60-118 36-96 (135)
73 3gyb_A Transcriptional regulat 81.1 3.4 0.00012 30.4 5.8 58 58-118 5-65 (280)
74 3qmx_A Glutaredoxin A, glutare 80.5 10 0.00034 25.0 8.6 56 59-118 16-73 (99)
75 1mjh_A Protein (ATP-binding do 80.5 9.1 0.00031 26.0 7.5 52 74-129 85-136 (162)
76 3ksm_A ABC-type sugar transpor 80.4 6.7 0.00023 28.4 7.1 60 60-121 2-67 (276)
77 3hgm_A Universal stress protei 80.3 10 0.00035 25.0 7.6 53 73-129 71-126 (147)
78 2qh8_A Uncharacterized protein 80.1 7.9 0.00027 29.3 7.7 64 57-121 7-77 (302)
79 2vo9_A EAD500, L-alanyl-D-glut 80.1 1.3 4.6E-05 33.4 3.3 56 73-130 40-96 (179)
80 2vk2_A YTFQ, ABC transporter p 79.8 17 0.00057 27.2 9.5 62 59-122 3-67 (306)
81 2fvy_A D-galactose-binding per 79.4 16 0.00054 26.9 9.0 62 59-121 3-67 (309)
82 3s3t_A Nucleotide-binding prot 79.3 7.3 0.00025 25.8 6.6 52 74-129 71-124 (146)
83 8abp_A L-arabinose-binding pro 79.3 16 0.00055 26.9 9.1 61 59-122 3-66 (306)
84 3e61_A Putative transcriptiona 79.3 14 0.00047 27.0 8.6 63 57-121 7-72 (277)
85 4fn4_A Short chain dehydrogena 78.9 11 0.00038 29.3 8.4 54 70-124 40-95 (254)
86 2wul_A Glutaredoxin related pr 78.8 9.4 0.00032 26.9 7.2 58 60-119 21-83 (118)
87 3o74_A Fructose transport syst 78.7 16 0.00055 26.4 9.8 63 59-123 3-68 (272)
88 2rjo_A Twin-arginine transloca 78.7 16 0.00056 27.6 9.1 63 58-122 5-72 (332)
89 3fst_A 5,10-methylenetetrahydr 78.6 15 0.00051 29.8 9.3 64 60-123 55-120 (304)
90 1jye_A Lactose operon represso 78.4 13 0.00044 28.7 8.6 61 58-120 61-125 (349)
91 1jx6_A LUXP protein; protein-l 78.3 20 0.00067 27.2 10.3 91 28-123 17-113 (342)
92 3brq_A HTH-type transcriptiona 78.3 17 0.00059 26.5 9.6 63 58-122 19-86 (296)
93 1nyt_A Shikimate 5-dehydrogena 78.3 14 0.00048 28.4 8.7 61 59-126 119-193 (271)
94 1m3s_A Hypothetical protein YC 78.0 9 0.00031 27.2 7.1 60 62-122 40-114 (186)
95 2nx9_A Oxaloacetate decarboxyl 78.0 6.9 0.00024 33.6 7.5 58 60-117 115-175 (464)
96 2fep_A Catabolite control prot 77.9 19 0.00064 26.7 9.4 63 57-121 15-80 (289)
97 3k4h_A Putative transcriptiona 77.9 13 0.00044 27.3 8.1 64 57-122 7-78 (292)
98 3iv7_A Alcohol dehydrogenase I 77.6 1.6 5.3E-05 36.0 3.2 62 60-125 39-100 (364)
99 2qv7_A Diacylglycerol kinase D 77.0 12 0.00041 29.7 8.2 61 59-122 25-89 (337)
100 2qv5_A AGR_C_5032P, uncharacte 76.7 2.3 8E-05 34.0 3.9 89 17-120 99-218 (261)
101 3brs_A Periplasmic binding pro 76.6 20 0.00067 26.2 9.6 63 59-123 6-75 (289)
102 3h8q_A Thioredoxin reductase 3 76.5 8.9 0.0003 25.6 6.3 57 60-118 18-76 (114)
103 1xp2_A EAD500, PLY500, L-alany 76.0 2.1 7.2E-05 33.0 3.3 55 74-130 41-96 (179)
104 2dum_A Hypothetical protein PH 75.7 14 0.00049 25.2 7.4 51 74-128 80-132 (170)
105 4a26_A Putative C-1-tetrahydro 75.7 7 0.00024 32.0 6.6 54 59-112 39-93 (300)
106 2nly_A BH1492 protein, diverge 75.5 2.5 8.4E-05 33.6 3.7 85 23-122 79-194 (245)
107 1jeo_A MJ1247, hypothetical pr 75.5 16 0.00054 25.7 7.7 60 62-122 43-117 (180)
108 1x60_A Sporulation-specific N- 75.0 13 0.00044 23.3 7.5 60 59-119 8-76 (79)
109 4eg0_A D-alanine--D-alanine li 74.8 3.1 0.00011 32.3 4.1 36 57-94 12-52 (317)
110 3sr3_A Microcin immunity prote 74.8 20 0.00067 29.1 9.1 64 59-125 14-91 (336)
111 2rgy_A Transcriptional regulat 74.5 23 0.0008 26.1 9.3 63 58-122 8-76 (290)
112 3huu_A Transcription regulator 74.5 14 0.00048 27.6 7.6 63 57-121 21-91 (305)
113 2klx_A Glutaredoxin; thioredox 74.5 11 0.00036 23.5 6.0 53 59-117 6-59 (89)
114 3d8u_A PURR transcriptional re 73.7 21 0.00071 25.9 8.2 61 59-121 4-67 (275)
115 3sho_A Transcriptional regulat 73.7 21 0.0007 25.2 8.0 57 61-117 41-118 (187)
116 4gqr_A Pancreatic alpha-amylas 73.7 1.8 6.3E-05 34.7 2.6 28 91-118 68-95 (496)
117 2fqx_A Membrane lipoprotein TM 72.6 31 0.001 26.6 9.4 60 59-121 5-70 (318)
118 2gm3_A Unknown protein; AT3G01 72.4 9.7 0.00033 26.3 5.9 51 74-128 89-139 (175)
119 3tb6_A Arabinose metabolism tr 72.4 25 0.00087 25.6 8.9 62 59-122 16-80 (298)
120 2dri_A D-ribose-binding protei 72.2 26 0.00089 25.6 9.7 61 59-121 2-65 (271)
121 2c07_A 3-oxoacyl-(acyl-carrier 72.2 25 0.00086 26.5 8.6 27 98-124 104-132 (285)
122 4h1h_A LMO1638 protein; MCCF-l 72.1 18 0.0006 29.2 8.1 66 59-125 13-90 (327)
123 2qu7_A Putative transcriptiona 72.1 25 0.00085 25.8 8.4 62 58-122 8-72 (288)
124 3bbl_A Regulatory protein of L 72.1 14 0.00049 27.3 7.1 62 59-122 5-73 (287)
125 1qpz_A PURA, protein (purine n 72.0 30 0.001 26.3 9.8 62 58-121 58-122 (340)
126 3rot_A ABC sugar transporter, 71.8 28 0.00096 25.8 9.7 62 59-122 4-70 (297)
127 3d02_A Putative LACI-type tran 71.3 28 0.00095 25.6 9.3 62 59-122 5-70 (303)
128 2cw6_A Hydroxymethylglutaryl-C 71.2 15 0.00052 28.9 7.4 57 60-117 96-173 (298)
129 2hqb_A Transcriptional activat 70.5 33 0.0011 26.1 9.2 66 58-125 126-193 (296)
130 1zl0_A Hypothetical protein PA 70.5 32 0.0011 27.8 9.3 67 59-126 18-93 (311)
131 1rqb_A Transcarboxylase 5S sub 70.4 15 0.00051 32.3 7.8 58 60-117 132-192 (539)
132 2x7x_A Sensor protein; transfe 70.1 29 0.00099 26.2 8.6 62 58-122 6-71 (325)
133 2khp_A Glutaredoxin; thioredox 69.4 17 0.0006 22.5 8.6 56 59-118 6-62 (92)
134 3gv0_A Transcriptional regulat 69.3 17 0.00059 26.9 7.0 63 57-121 7-74 (288)
135 3k5i_A Phosphoribosyl-aminoimi 69.1 0.95 3.2E-05 37.0 -0.1 28 16-43 374-401 (403)
136 3ic4_A Glutaredoxin (GRX-1); s 68.9 12 0.00042 23.2 5.3 57 60-118 13-72 (92)
137 1gud_A ALBP, D-allose-binding 68.8 33 0.0011 25.4 9.4 61 60-122 3-68 (288)
138 3clk_A Transcription regulator 68.7 19 0.00064 26.6 7.1 63 57-121 7-73 (290)
139 3clh_A 3-dehydroquinate syntha 68.5 1.5 5.3E-05 35.5 1.0 65 59-125 27-97 (343)
140 1tq8_A Hypothetical protein RV 68.5 23 0.00079 24.5 7.2 51 72-126 81-132 (163)
141 3k9c_A Transcriptional regulat 68.2 27 0.00093 25.8 7.9 62 57-122 11-75 (289)
142 3hcw_A Maltose operon transcri 68.1 23 0.00077 26.4 7.5 63 57-121 6-76 (295)
143 2ftp_A Hydroxymethylglutaryl-C 68.1 20 0.00068 28.3 7.5 47 72-118 124-177 (302)
144 3idf_A USP-like protein; unive 68.0 22 0.00076 23.2 7.9 49 74-128 68-116 (138)
145 3gbv_A Putative LACI-family tr 67.8 33 0.0011 25.0 8.4 66 57-122 7-78 (304)
146 3iwt_A 178AA long hypothetical 67.1 31 0.0011 24.8 7.8 66 57-125 14-93 (178)
147 3tla_A MCCF; serine protease, 67.1 18 0.00061 30.1 7.3 66 59-125 44-121 (371)
148 1nm3_A Protein HI0572; hybrid, 67.0 13 0.00046 27.3 6.0 35 60-96 171-205 (241)
149 3ble_A Citramalate synthase fr 66.9 7 0.00024 31.7 4.7 57 61-117 112-186 (337)
150 3fxa_A SIS domain protein; str 66.8 14 0.00048 26.6 5.9 57 62-118 48-124 (201)
151 1fov_A Glutaredoxin 3, GRX3; a 66.5 18 0.00062 21.6 7.8 47 69-117 9-55 (82)
152 1nvt_A Shikimate 5'-dehydrogen 66.4 19 0.00065 27.8 6.9 59 59-125 128-205 (287)
153 3l07_A Bifunctional protein fo 66.2 16 0.00055 29.7 6.7 54 59-112 36-90 (285)
154 2b99_A Riboflavin synthase; lu 66.0 9.8 0.00033 28.6 5.0 59 59-120 3-64 (156)
155 4g81_D Putative hexonate dehyd 65.9 29 0.00099 26.9 7.9 26 59-86 9-34 (255)
156 2pju_A Propionate catabolism o 65.8 14 0.00047 28.6 6.0 55 59-120 107-161 (225)
157 2q5c_A NTRC family transcripti 65.4 13 0.00044 27.8 5.6 55 59-120 95-149 (196)
158 4a5o_A Bifunctional protein fo 65.2 17 0.00059 29.5 6.7 54 59-112 37-91 (286)
159 4b4u_A Bifunctional protein fo 65.2 5.5 0.00019 32.8 3.7 34 90-128 204-237 (303)
160 4e5s_A MCCFLIKE protein (BA_56 65.2 29 0.001 28.1 8.1 66 59-125 13-90 (331)
161 3can_A Pyruvate-formate lyase- 64.9 33 0.0011 24.1 7.5 50 69-118 107-180 (182)
162 3l4e_A Uncharacterized peptida 64.9 13 0.00044 28.1 5.6 48 59-108 28-79 (206)
163 3p2o_A Bifunctional protein fo 64.4 19 0.00065 29.2 6.8 54 59-112 35-89 (285)
164 3fg9_A Protein of universal st 64.1 22 0.00077 23.8 6.2 51 74-127 81-133 (156)
165 2h3h_A Sugar ABC transporter, 63.9 36 0.0012 25.4 7.9 62 60-123 3-67 (313)
166 3gkx_A Putative ARSC family re 63.8 9.7 0.00033 26.4 4.3 41 69-109 12-53 (120)
167 3s40_A Diacylglycerol kinase; 63.5 19 0.00065 28.2 6.5 59 60-122 10-72 (304)
168 1uta_A FTSN, MSGA, cell divisi 63.5 9.5 0.00032 24.3 4.0 58 60-117 9-74 (81)
169 2bon_A Lipid kinase; DAG kinas 63.4 28 0.00095 27.5 7.5 61 59-122 30-91 (332)
170 3g1w_A Sugar ABC transporter; 63.2 42 0.0014 24.7 8.9 62 59-122 5-70 (305)
171 2ioy_A Periplasmic sugar-bindi 63.1 42 0.0014 24.6 9.8 60 60-121 3-65 (283)
172 3td9_A Branched chain amino ac 63.0 16 0.00054 27.8 5.8 60 59-120 150-211 (366)
173 1ydn_A Hydroxymethylglutaryl-C 62.8 15 0.00051 28.7 5.7 48 70-117 118-172 (295)
174 3mt0_A Uncharacterized protein 62.5 37 0.0013 25.4 7.7 58 68-128 47-104 (290)
175 1kq3_A Glycerol dehydrogenase; 62.2 0.69 2.4E-05 37.7 -2.2 64 59-125 42-106 (376)
176 3rdw_A Putative arsenate reduc 61.9 8.7 0.0003 26.7 3.8 41 69-109 13-54 (121)
177 1u6t_A SH3 domain-binding glut 61.9 24 0.00082 25.0 6.2 35 73-109 18-52 (121)
178 2lqo_A Putative glutaredoxin R 61.8 13 0.00043 24.7 4.5 55 60-118 5-61 (92)
179 2hsg_A Glucose-resistance amyl 61.6 41 0.0014 25.4 7.9 63 57-121 59-124 (332)
180 3rht_A (gatase1)-like protein; 61.6 7.5 0.00026 30.8 3.8 38 59-99 5-42 (259)
181 3apt_A Methylenetetrahydrofola 61.6 23 0.00077 28.5 6.7 51 73-124 60-110 (310)
182 3u7r_A NADPH-dependent FMN red 61.4 20 0.0007 26.6 6.0 53 59-111 3-67 (190)
183 1w0m_A TIM, triosephosphate is 61.3 17 0.0006 28.2 5.8 44 78-121 78-122 (226)
184 3loq_A Universal stress protei 61.3 48 0.0017 24.7 9.1 54 70-127 212-265 (294)
185 2c2x_A Methylenetetrahydrofola 61.2 24 0.00081 28.6 6.8 53 59-111 34-87 (281)
186 3ngx_A Bifunctional protein fo 61.2 24 0.00083 28.5 6.8 52 59-111 29-81 (276)
187 3p6l_A Sugar phosphate isomera 60.9 35 0.0012 25.0 7.3 47 73-119 64-110 (262)
188 4eys_A MCCC family protein; MC 60.7 60 0.002 26.4 9.2 66 59-125 6-85 (346)
189 2q5c_A NTRC family transcripti 60.7 29 0.001 25.8 6.8 59 59-125 5-63 (196)
190 2xhz_A KDSD, YRBH, arabinose 5 60.4 30 0.001 24.2 6.6 56 62-117 52-127 (183)
191 3fz4_A Putative arsenate reduc 60.0 12 0.00042 25.8 4.3 40 69-108 11-51 (120)
192 3f0i_A Arsenate reductase; str 59.8 8.2 0.00028 26.7 3.4 41 69-109 12-53 (119)
193 3etn_A Putative phosphosugar i 59.6 34 0.0012 25.3 7.1 58 61-118 61-140 (220)
194 3rhb_A ATGRXC5, glutaredoxin-C 59.4 17 0.00058 23.7 4.8 57 60-118 20-79 (113)
195 1z3e_A Regulatory protein SPX; 59.3 18 0.0006 25.1 5.1 39 69-107 9-48 (132)
196 3pzy_A MOG; ssgcid, seattle st 58.8 24 0.00082 25.7 5.9 66 57-125 6-78 (164)
197 1jub_A Dihydroorotate dehydrog 58.7 45 0.0015 25.8 7.9 35 60-96 96-132 (311)
198 3sju_A Keto reductase; short-c 58.7 44 0.0015 25.2 7.7 27 58-86 23-49 (279)
199 2h6r_A Triosephosphate isomera 58.3 46 0.0016 25.0 7.7 60 63-122 37-120 (219)
200 3bg3_A Pyruvate carboxylase, m 58.2 47 0.0016 30.1 8.8 62 61-123 213-283 (718)
201 4e08_A DJ-1 beta; flavodoxin-l 58.0 28 0.00095 24.9 6.1 39 57-97 4-42 (190)
202 1ydo_A HMG-COA lyase; TIM-barr 57.6 25 0.00085 28.1 6.3 57 61-117 97-174 (307)
203 2ztj_A Homocitrate synthase; ( 57.6 31 0.0011 28.3 7.1 55 61-116 90-160 (382)
204 4g85_A Histidine-tRNA ligase, 57.4 48 0.0016 27.9 8.3 60 57-120 418-477 (517)
205 2z08_A Universal stress protei 57.2 38 0.0013 22.1 6.6 50 75-128 60-114 (137)
206 4hoj_A REGF protein; GST, glut 56.7 17 0.00057 25.9 4.7 33 72-104 13-45 (210)
207 2kok_A Arsenate reductase; bru 56.7 9.8 0.00034 26.0 3.3 40 69-108 13-53 (120)
208 3qk7_A Transcriptional regulat 56.3 37 0.0013 25.1 6.8 63 57-122 5-74 (294)
209 2fzv_A Putative arsenical resi 56.0 67 0.0023 25.5 8.6 54 57-112 57-124 (279)
210 1t1v_A SH3BGRL3, SH3 domain-bi 55.9 21 0.00073 22.6 4.7 55 60-118 3-66 (93)
211 1wdv_A Hypothetical protein AP 55.2 9.8 0.00034 26.5 3.2 47 74-120 2-49 (152)
212 3l4n_A Monothiol glutaredoxin- 55.1 30 0.001 24.0 5.7 58 60-119 15-77 (127)
213 1vim_A Hypothetical protein AF 55.0 38 0.0013 24.5 6.5 60 62-122 50-124 (200)
214 2dxa_A Protein YBAK; trans-edi 54.6 5.4 0.00018 28.7 1.7 52 68-119 2-57 (166)
215 1rw1_A Conserved hypothetical 54.0 12 0.0004 25.3 3.3 40 69-108 8-48 (114)
216 1vjq_A Designed protein; struc 54.0 38 0.0013 21.2 5.6 27 64-93 43-69 (79)
217 2e6f_A Dihydroorotate dehydrog 53.9 28 0.00096 27.0 5.9 49 59-109 95-155 (314)
218 4b4u_A Bifunctional protein fo 53.9 35 0.0012 28.0 6.7 53 59-111 55-108 (303)
219 1lwj_A 4-alpha-glucanotransfer 53.7 39 0.0013 27.4 7.0 51 69-119 20-89 (441)
220 4g84_A Histidine--tRNA ligase, 53.3 48 0.0017 27.0 7.5 59 58-120 366-424 (464)
221 3nsx_A Alpha-glucosidase; stru 53.3 43 0.0015 29.8 7.6 86 21-120 138-238 (666)
222 3f9i_A 3-oxoacyl-[acyl-carrier 53.2 57 0.0019 23.6 7.2 63 57-125 12-96 (249)
223 3nrc_A Enoyl-[acyl-carrier-pro 53.0 69 0.0024 24.0 7.9 65 59-125 26-115 (280)
224 1yx1_A Hypothetical protein PA 52.8 29 0.00099 25.7 5.6 47 72-118 84-130 (264)
225 3r5x_A D-alanine--D-alanine li 52.7 21 0.00071 27.0 4.9 55 59-121 4-63 (307)
226 4aie_A Glucan 1,6-alpha-glucos 52.6 34 0.0012 28.0 6.5 51 69-119 29-99 (549)
227 1hg3_A Triosephosphate isomera 52.4 18 0.00061 28.1 4.5 44 78-121 81-125 (225)
228 1u9c_A APC35852; structural ge 52.0 35 0.0012 24.9 5.9 41 57-99 4-54 (224)
229 2h0a_A TTHA0807, transcription 51.5 31 0.0011 24.9 5.5 60 61-122 2-64 (276)
230 2z1k_A (NEO)pullulanase; hydro 51.3 36 0.0012 27.8 6.4 52 69-120 47-117 (475)
231 1ejb_A Lumazine synthase; anal 51.3 66 0.0023 24.1 7.4 62 59-120 17-87 (168)
232 3lzd_A DPH2; diphthamide biosy 51.1 31 0.0011 29.0 6.1 55 59-121 265-322 (378)
233 3l78_A Regulatory protein SPX; 50.9 30 0.001 23.6 5.1 39 69-107 8-47 (120)
234 3rfq_A Pterin-4-alpha-carbinol 50.9 47 0.0016 24.9 6.6 67 57-125 29-101 (185)
235 1j0h_A Neopullulanase; beta-al 50.6 42 0.0014 28.6 6.9 50 70-119 174-242 (588)
236 1rvv_A Riboflavin synthase; tr 50.2 50 0.0017 24.4 6.5 60 59-121 13-79 (154)
237 1wzl_A Alpha-amylase II; pullu 50.0 42 0.0014 28.6 6.8 50 70-119 171-239 (585)
238 3l4y_A Maltase-glucoamylase, i 49.9 43 0.0015 31.0 7.3 86 21-120 265-365 (875)
239 2guy_A Alpha-amylase A; (beta- 49.8 44 0.0015 27.4 6.7 51 69-119 40-117 (478)
240 2gzx_A Putative TATD related D 49.5 33 0.0011 25.0 5.4 50 70-122 107-156 (265)
241 1p77_A Shikimate 5-dehydrogena 49.5 65 0.0022 24.6 7.3 59 60-125 120-192 (272)
242 2l82_A Designed protein OR32; 49.4 75 0.0026 23.3 8.1 60 62-121 29-111 (162)
243 2fqx_A Membrane lipoprotein TM 49.3 87 0.003 24.0 9.2 65 60-124 131-199 (318)
244 3imf_A Short chain dehydrogena 49.3 76 0.0026 23.4 7.5 26 59-86 6-31 (257)
245 3rf7_A Iron-containing alcohol 49.2 11 0.00038 31.1 3.0 63 60-125 55-121 (375)
246 2wc7_A Alpha amylase, catalyti 48.3 32 0.0011 28.4 5.7 52 69-120 53-123 (488)
247 2d0o_B DIOL dehydratase-reacti 48.1 49 0.0017 23.8 6.0 60 58-122 7-67 (125)
248 3ewb_X 2-isopropylmalate synth 48.0 41 0.0014 26.7 6.1 57 60-117 96-167 (293)
249 2l69_A Rossmann 2X3 fold prote 47.8 74 0.0025 22.8 8.0 47 69-117 59-105 (134)
250 4gpa_A Glutamate receptor 4; P 47.8 83 0.0028 23.7 7.6 62 59-121 131-192 (389)
251 3l18_A Intracellular protease 47.8 38 0.0013 23.5 5.3 38 59-98 3-40 (168)
252 3nzn_A Glutaredoxin; structura 47.7 16 0.00054 23.7 3.0 45 59-106 22-66 (103)
253 1nq4_A Oxytetracycline polyket 47.5 9.3 0.00032 25.1 1.9 45 64-109 36-80 (95)
254 1v95_A Nuclear receptor coacti 47.1 64 0.0022 23.2 6.5 59 59-120 9-67 (130)
255 2g3m_A Maltase, alpha-glucosid 46.9 59 0.002 28.9 7.5 86 21-120 150-250 (693)
256 3h7a_A Short chain dehydrogena 46.8 85 0.0029 23.2 7.9 26 59-86 7-32 (252)
257 1a4i_A Methylenetetrahydrofola 46.7 44 0.0015 27.3 6.2 53 59-111 37-90 (301)
258 2vzf_A NADH-dependent FMN redu 46.4 54 0.0018 23.5 6.1 50 60-111 4-69 (197)
259 3pgx_A Carveol dehydrogenase; 46.3 89 0.003 23.3 9.7 26 59-86 15-40 (280)
260 1x92_A APC5045, phosphoheptose 46.2 60 0.002 23.0 6.3 60 62-122 48-148 (199)
261 4aef_A Neopullulanase (alpha-a 46.1 44 0.0015 28.8 6.4 51 70-120 237-306 (645)
262 3v7e_A Ribosome-associated pro 45.8 34 0.0012 22.1 4.5 29 62-90 30-58 (82)
263 3op6_A Uncharacterized protein 45.6 21 0.00073 25.2 3.7 34 74-107 4-37 (152)
264 3lmz_A Putative sugar isomeras 45.1 58 0.002 23.9 6.2 46 69-118 86-131 (257)
265 2ct6_A SH3 domain-binding glut 45.1 23 0.0008 23.6 3.7 45 60-108 9-59 (111)
266 1r7h_A NRDH-redoxin; thioredox 45.0 22 0.00074 20.7 3.2 31 70-102 10-40 (75)
267 1hqk_A 6,7-dimethyl-8-ribityll 44.8 52 0.0018 24.3 5.8 59 59-120 13-78 (154)
268 2dh2_A 4F2 cell-surface antige 44.7 43 0.0015 27.4 5.9 51 69-119 33-101 (424)
269 1fob_A Beta-1,4-galactanase; B 44.7 25 0.00087 28.1 4.4 44 77-120 32-80 (334)
270 1iow_A DD-ligase, DDLB, D-ALA\ 44.6 36 0.0012 25.4 5.0 37 59-97 3-44 (306)
271 3egl_A DEGV family protein; al 44.6 37 0.0013 26.8 5.3 64 60-129 5-77 (277)
272 1di6_A MOGA, molybdenum cofact 44.5 97 0.0033 23.2 8.2 65 59-125 4-78 (195)
273 1m53_A Isomaltulose synthase; 44.5 50 0.0017 28.1 6.4 51 69-119 42-112 (570)
274 4hi7_A GI20122; GST, glutathio 44.4 26 0.00089 25.2 4.1 36 72-107 13-48 (228)
275 2q62_A ARSH; alpha/beta, flavo 44.3 1.1E+02 0.0036 23.5 10.4 52 58-111 34-98 (247)
276 1ea9_C Cyclomaltodextrinase; h 44.2 52 0.0018 28.1 6.6 50 70-119 170-238 (583)
277 1zja_A Trehalulose synthase; s 44.2 62 0.0021 27.3 6.9 51 69-119 29-99 (557)
278 3olq_A Universal stress protei 44.1 63 0.0022 24.1 6.4 50 76-128 77-126 (319)
279 3grk_A Enoyl-(acyl-carrier-pro 44.0 1E+02 0.0035 23.4 7.8 65 59-125 31-121 (293)
280 3vup_A Beta-1,4-mannanase; TIM 43.9 57 0.0019 23.7 5.9 51 69-120 39-110 (351)
281 3ot1_A 4-methyl-5(B-hydroxyeth 43.7 57 0.002 23.8 6.0 39 57-97 8-46 (208)
282 3ucx_A Short chain dehydrogena 43.5 97 0.0033 22.9 7.9 26 59-86 11-36 (264)
283 3lpp_A Sucrase-isomaltase; gly 43.3 66 0.0023 29.8 7.4 85 22-120 294-393 (898)
284 1b0a_A Protein (fold bifunctio 42.8 48 0.0016 26.9 5.8 53 59-111 35-88 (288)
285 1uok_A Oligo-1,6-glucosidase; 42.8 42 0.0014 28.4 5.7 52 69-120 28-99 (558)
286 1s3c_A Arsenate reductase; ARS 42.0 39 0.0013 23.9 4.7 40 69-108 10-50 (141)
287 3qay_A Endolysin; amidase A/B 41.8 69 0.0024 23.4 6.1 54 68-121 29-85 (180)
288 3nq4_A 6,7-dimethyl-8-ribityll 41.8 1E+02 0.0036 22.8 7.4 60 58-120 12-79 (156)
289 3p6l_A Sugar phosphate isomera 41.8 88 0.003 22.8 6.7 47 68-118 87-133 (262)
290 1yix_A Deoxyribonuclease YCFH; 41.5 59 0.002 23.7 5.7 46 70-118 109-154 (265)
291 1wu7_A Histidyl-tRNA synthetas 41.5 88 0.003 25.5 7.3 57 59-120 333-389 (434)
292 1ooe_A Dihydropteridine reduct 41.3 97 0.0033 22.3 8.5 62 59-124 3-83 (236)
293 2qh8_A Uncharacterized protein 41.3 1.1E+02 0.0037 22.8 7.4 60 59-122 141-202 (302)
294 4fs3_A Enoyl-[acyl-carrier-pro 41.2 38 0.0013 25.4 4.7 28 59-86 6-33 (256)
295 3m3m_A Glutathione S-transfera 41.1 37 0.0013 23.7 4.4 25 71-95 12-36 (210)
296 1e2b_A Enzyme IIB-cellobiose; 41.1 39 0.0013 22.9 4.3 51 60-121 5-58 (106)
297 1qho_A Alpha-amylase; glycosid 41.0 70 0.0024 27.9 6.9 51 69-119 49-127 (686)
298 2obx_A DMRL synthase 1, 6,7-di 40.8 54 0.0018 24.3 5.4 60 59-121 12-78 (157)
299 1d3c_A Cyclodextrin glycosyltr 40.6 52 0.0018 28.7 6.0 51 69-119 52-135 (686)
300 2qjg_A Putative aldolase MJ040 40.5 1.1E+02 0.0039 22.9 8.9 58 62-119 119-185 (273)
301 1vki_A Hypothetical protein AT 40.5 24 0.00083 25.8 3.4 48 72-119 19-66 (181)
302 3hut_A Putative branched-chain 40.3 1.1E+02 0.0039 22.8 9.0 63 59-121 5-80 (358)
303 2l2q_A PTS system, cellobiose- 40.2 75 0.0026 21.2 5.7 53 60-123 6-61 (109)
304 1tvm_A PTS system, galactitol- 40.2 84 0.0029 21.2 7.8 57 59-124 22-80 (113)
305 1vjf_A DNA-binding protein, pu 39.9 39 0.0013 24.7 4.5 47 73-119 15-61 (180)
306 3v8b_A Putative dehydrogenase, 39.9 1.2E+02 0.0041 22.9 7.9 26 59-86 28-53 (283)
307 3civ_A Endo-beta-1,4-mannanase 39.8 1E+02 0.0035 24.9 7.3 50 68-118 50-115 (343)
308 2wte_A CSA3; antiviral protein 39.7 1.3E+02 0.0044 23.2 8.9 63 60-124 36-104 (244)
309 3pam_A Transmembrane protein; 39.7 85 0.0029 23.0 6.4 57 60-123 130-186 (259)
310 1efp_B ETF, protein (electron 39.4 1.3E+02 0.0044 23.3 7.6 60 60-123 58-123 (252)
311 3ff4_A Uncharacterized protein 39.2 48 0.0017 23.0 4.7 64 60-123 6-92 (122)
312 3ivs_A Homocitrate synthase, m 39.1 65 0.0022 27.3 6.3 47 71-117 150-197 (423)
313 1f76_A Dihydroorotate dehydrog 39.1 1.1E+02 0.0039 23.9 7.4 37 85-122 211-247 (336)
314 3o21_A Glutamate receptor 3; p 38.9 1.4E+02 0.0047 23.3 8.4 63 59-121 131-193 (389)
315 2qq5_A DHRS1, dehydrogenase/re 38.8 1.1E+02 0.0039 22.3 7.7 24 99-122 66-92 (260)
316 3cis_A Uncharacterized protein 38.8 1.2E+02 0.004 22.8 7.2 50 74-129 84-138 (309)
317 3lft_A Uncharacterized protein 38.7 1.2E+02 0.004 22.5 7.9 60 59-122 134-195 (295)
318 3tnj_A Universal stress protei 38.6 77 0.0026 20.7 5.5 43 80-126 79-122 (150)
319 3tfo_A Putative 3-oxoacyl-(acy 38.6 1.2E+02 0.0042 22.7 8.0 27 98-124 64-92 (264)
320 3nyw_A Putative oxidoreductase 38.5 1.2E+02 0.004 22.4 7.3 26 59-86 7-32 (250)
321 2aaa_A Alpha-amylase; glycosid 38.5 81 0.0028 25.9 6.6 51 69-119 40-117 (484)
322 1di0_A Lumazine synthase; tran 38.4 60 0.002 24.1 5.3 60 59-121 11-77 (158)
323 1dp4_A Atrial natriuretic pept 38.4 82 0.0028 24.5 6.4 61 59-121 147-214 (435)
324 3dzc_A UDP-N-acetylglucosamine 38.2 22 0.00075 28.6 3.1 39 59-97 26-65 (396)
325 1yo6_A Putative carbonyl reduc 38.0 1E+02 0.0036 21.7 8.3 64 60-125 4-93 (250)
326 2pjk_A 178AA long hypothetical 37.9 1.1E+02 0.0037 22.4 6.7 67 57-125 14-93 (178)
327 2w61_A GAS2P, glycolipid-ancho 37.9 58 0.002 28.5 5.9 50 69-121 84-134 (555)
328 3vk9_A Glutathione S-transfera 37.9 27 0.00092 25.0 3.3 35 72-106 12-46 (216)
329 2ab0_A YAJL; DJ-1/THIJ superfa 37.9 79 0.0027 22.9 5.9 38 59-98 3-40 (205)
330 3vln_A GSTO-1, glutathione S-t 37.9 40 0.0014 24.3 4.2 33 71-103 32-64 (241)
331 3gdg_A Probable NADP-dependent 37.8 1.2E+02 0.004 22.2 7.4 65 59-125 20-113 (267)
332 4h15_A Short chain alcohol deh 37.6 1.4E+02 0.0046 22.9 8.4 65 59-127 11-92 (261)
333 3aj7_A Oligo-1,6-glucosidase; 37.6 89 0.003 26.8 7.0 51 69-119 37-107 (589)
334 3rmj_A 2-isopropylmalate synth 37.5 63 0.0022 26.6 5.8 58 61-118 103-175 (370)
335 4ba0_A Alpha-glucosidase, puta 37.3 78 0.0027 28.9 6.9 86 21-120 237-342 (817)
336 2ze0_A Alpha-glucosidase; TIM 37.3 76 0.0026 26.8 6.4 50 69-118 28-97 (555)
337 3gyb_A Transcriptional regulat 37.2 46 0.0016 24.1 4.5 64 59-122 119-185 (280)
338 4e4t_A Phosphoribosylaminoimid 37.0 7.9 0.00027 31.9 0.3 26 15-40 389-414 (419)
339 1vl8_A Gluconate 5-dehydrogena 37.0 1.3E+02 0.0044 22.4 7.9 28 57-86 19-46 (267)
340 3lxz_A Glutathione S-transfera 37.0 48 0.0016 23.6 4.5 29 72-100 12-40 (229)
341 1uuy_A CNX1, molybdopterin bio 36.9 1.1E+02 0.0039 21.7 7.3 66 58-125 5-83 (167)
342 3qc0_A Sugar isomerase; TIM ba 36.9 1.1E+02 0.0036 22.2 6.5 47 72-118 83-141 (275)
343 3j21_Z 50S ribosomal protein L 36.8 51 0.0017 21.8 4.3 30 63-92 35-64 (99)
344 2cq9_A GLRX2 protein, glutared 36.8 55 0.0019 22.1 4.6 57 60-118 28-86 (130)
345 3hba_A Putative phosphosugar i 36.7 1.4E+02 0.0049 23.6 7.7 64 59-122 204-289 (334)
346 3m0f_A Uncharacterized protein 36.6 45 0.0015 23.4 4.2 31 72-102 12-42 (213)
347 2pju_A Propionate catabolism o 36.5 69 0.0024 24.6 5.6 61 60-125 14-75 (225)
348 3ftp_A 3-oxoacyl-[acyl-carrier 36.4 1.3E+02 0.0045 22.4 7.3 26 59-86 28-53 (270)
349 2o7s_A DHQ-SDH PR, bifunctiona 36.3 1.1E+02 0.0037 25.9 7.2 58 59-123 364-434 (523)
350 4aee_A Alpha amylase, catalyti 36.3 63 0.0021 28.3 5.9 51 69-119 262-331 (696)
351 3fdx_A Putative filament prote 36.3 87 0.003 20.2 6.8 49 75-128 69-120 (143)
352 3ab8_A Putative uncharacterize 36.1 1.2E+02 0.0042 21.9 7.1 46 74-125 76-121 (268)
353 2i0f_A 6,7-dimethyl-8-ribityll 36.1 98 0.0034 22.9 6.2 63 59-121 13-81 (157)
354 1w41_A 50S ribosomal protein L 36.0 58 0.002 21.6 4.5 57 63-125 36-93 (101)
355 1mkz_A Molybdenum cofactor bio 35.9 1.2E+02 0.0041 21.8 10.0 67 57-125 9-81 (172)
356 1pea_A Amidase operon; gene re 35.7 1.5E+02 0.005 22.7 9.5 64 59-122 8-84 (385)
357 2iw0_A Chitin deacetylase; hyd 35.7 1E+02 0.0035 23.4 6.4 40 72-115 54-100 (254)
358 3fvw_A Putative NAD(P)H-depend 35.6 1.2E+02 0.0042 21.7 7.1 60 59-120 3-74 (192)
359 3uk7_A Class I glutamine amido 35.6 46 0.0016 26.7 4.6 68 20-99 177-244 (396)
360 3c8f_A Pyruvate formate-lyase 35.5 1.2E+02 0.004 21.5 6.9 42 72-113 147-191 (245)
361 3mt0_A Uncharacterized protein 35.4 82 0.0028 23.4 5.8 49 77-129 204-253 (290)
362 3dx5_A Uncharacterized protein 35.4 1.1E+02 0.0036 22.5 6.3 47 71-118 83-141 (286)
363 3lkb_A Probable branched-chain 35.2 63 0.0021 24.7 5.2 87 16-120 117-205 (392)
364 3tox_A Short chain dehydrogena 35.1 1.4E+02 0.0049 22.4 7.9 40 59-104 8-47 (280)
365 1efv_B Electron transfer flavo 35.1 1.6E+02 0.0054 22.9 8.3 60 60-123 61-126 (255)
366 3pwz_A Shikimate dehydrogenase 35.1 1.6E+02 0.0054 22.9 8.1 61 59-125 120-195 (272)
367 2zic_A Dextran glucosidase; TI 35.1 84 0.0029 26.5 6.3 52 69-120 28-99 (543)
368 3m8n_A Possible glutathione S- 35.0 48 0.0016 23.6 4.2 29 72-100 13-45 (225)
369 3nkl_A UDP-D-quinovosamine 4-d 34.9 85 0.0029 20.8 5.3 41 78-119 58-98 (141)
370 3ih5_A Electron transfer flavo 34.8 78 0.0027 23.9 5.6 59 59-122 38-100 (217)
371 3ur8_A Glucan endo-1,3-beta-D- 34.6 77 0.0026 25.9 5.9 54 61-121 3-57 (323)
372 1oi4_A Hypothetical protein YH 34.6 1.3E+02 0.0043 21.6 6.6 40 58-99 23-62 (193)
373 1qnr_A Endo-1,4-B-D-mannanase; 34.5 1E+02 0.0036 23.3 6.3 49 70-120 34-110 (344)
374 3r1i_A Short-chain type dehydr 34.4 1.5E+02 0.005 22.3 7.2 26 59-86 32-57 (276)
375 3rd5_A Mypaa.01249.C; ssgcid, 34.4 1.4E+02 0.0049 22.2 7.9 61 57-125 14-98 (291)
376 2vrn_A Protease I, DR1199; cys 34.4 87 0.003 22.0 5.5 39 59-99 10-48 (190)
377 4ibo_A Gluconate dehydrogenase 34.3 1.4E+02 0.005 22.2 8.2 26 59-86 26-51 (271)
378 1m7x_A 1,4-alpha-glucan branch 34.3 99 0.0034 26.6 6.8 50 70-119 153-224 (617)
379 3bmv_A Cyclomaltodextrin gluca 34.3 75 0.0026 27.7 6.0 51 69-119 52-136 (683)
380 3rpe_A MDAB, modulator of drug 34.1 1.5E+02 0.0052 22.4 7.2 36 58-93 25-68 (218)
381 1b0a_A Protein (fold bifunctio 33.9 34 0.0011 27.8 3.5 57 59-127 160-216 (288)
382 3kvo_A Hydroxysteroid dehydrog 33.9 1.7E+02 0.0059 23.0 8.2 63 58-124 44-140 (346)
383 3gbv_A Putative LACI-family tr 33.9 1.3E+02 0.0045 21.7 6.8 63 59-123 136-210 (304)
384 2v6k_A Maleylpyruvate isomeras 33.8 44 0.0015 23.3 3.8 25 72-96 12-36 (214)
385 1usg_A Leucine-specific bindin 33.8 1.4E+02 0.0048 22.0 8.6 61 60-120 4-76 (346)
386 1kte_A Thioltransferase; redox 33.4 88 0.003 19.5 5.9 57 60-118 13-74 (105)
387 1j6o_A TATD-related deoxyribon 33.4 88 0.003 23.4 5.7 46 70-118 118-163 (268)
388 1zem_A Xylitol dehydrogenase; 33.3 1.4E+02 0.0049 21.9 8.2 25 59-85 7-31 (262)
389 3k31_A Enoyl-(acyl-carrier-pro 33.2 1.6E+02 0.0054 22.3 8.2 65 59-125 30-120 (296)
390 2ahe_A Chloride intracellular 33.1 71 0.0024 24.0 5.1 32 71-102 35-66 (267)
391 3ezl_A Acetoacetyl-COA reducta 33.1 1E+02 0.0035 22.3 5.9 65 57-125 11-103 (256)
392 1a4i_A Methylenetetrahydrofola 33.1 54 0.0018 26.8 4.6 57 59-127 166-222 (301)
393 2b4q_A Rhamnolipids biosynthes 33.0 1.5E+02 0.0052 22.1 8.5 40 59-104 29-68 (276)
394 3ctg_A Glutaredoxin-2; reduced 33.0 76 0.0026 21.6 4.8 57 60-118 38-100 (129)
395 3bby_A Uncharacterized GST-lik 32.9 67 0.0023 22.5 4.7 34 63-96 8-42 (215)
396 2fvy_A D-galactose-binding per 32.8 1.4E+02 0.0048 21.7 7.6 64 59-122 141-212 (309)
397 1usg_A Leucine-specific bindin 32.7 1.4E+02 0.0049 21.9 6.7 61 59-121 139-201 (346)
398 1c2y_A Protein (lumazine synth 32.7 84 0.0029 23.3 5.3 60 59-121 14-79 (156)
399 2q02_A Putative cytoplasmic pr 32.7 1.3E+02 0.0044 21.8 6.3 47 71-118 84-138 (272)
400 3tjr_A Short chain dehydrogena 32.6 1.6E+02 0.0055 22.3 8.2 26 59-86 31-56 (301)
401 3lt0_A Enoyl-ACP reductase; tr 32.6 1E+02 0.0034 23.8 6.0 29 59-87 2-30 (329)
402 1evl_A Threonyl-tRNA synthetas 32.6 1.9E+02 0.0066 23.2 8.2 57 59-120 299-355 (401)
403 3lmz_A Putative sugar isomeras 32.5 1.1E+02 0.0039 22.2 6.1 47 72-118 61-107 (257)
404 2c0h_A Mannan endo-1,4-beta-ma 32.5 1.1E+02 0.0037 23.3 6.1 49 71-120 44-111 (353)
405 3ab8_A Putative uncharacterize 32.4 1.4E+02 0.0049 21.6 6.9 22 72-93 199-220 (268)
406 3rbt_A Glutathione transferase 32.4 63 0.0022 23.5 4.6 34 71-104 35-68 (246)
407 3qiv_A Short-chain dehydrogena 32.3 1.4E+02 0.0048 21.5 8.4 26 59-86 9-34 (253)
408 1yht_A DSPB; beta barrel, hydr 32.2 31 0.001 28.3 3.1 25 96-120 91-115 (367)
409 3ubk_A Glutathione transferase 32.2 49 0.0017 24.0 4.0 30 71-100 12-41 (242)
410 3f6d_A Adgstd4-4, glutathione 32.1 82 0.0028 22.1 5.0 26 72-97 10-35 (219)
411 4hz2_A Glutathione S-transfera 32.0 63 0.0022 23.2 4.5 25 71-95 31-55 (230)
412 2vs7_A I-DMOI, homing endonucl 31.7 41 0.0014 25.0 3.5 26 67-92 128-153 (199)
413 1cyg_A Cyclodextrin glucanotra 31.6 78 0.0027 27.5 5.7 24 96-119 108-131 (680)
414 1k0m_A CLIC1, NCC27, chloride 31.6 82 0.0028 23.0 5.1 30 71-100 24-54 (241)
415 1tv8_A MOAA, molybdenum cofact 31.5 1.1E+02 0.0038 23.6 6.2 51 66-116 140-191 (340)
416 3do6_A Formate--tetrahydrofola 31.4 1.8E+02 0.0061 25.9 7.9 52 68-119 336-395 (543)
417 2z0x_A Putative uncharacterize 31.4 42 0.0014 23.5 3.3 45 74-118 7-53 (158)
418 2c92_A 6,7-dimethyl-8-ribityll 31.3 1.1E+02 0.0036 22.8 5.7 57 59-120 18-79 (160)
419 3dhu_A Alpha-amylase; structur 31.3 62 0.0021 26.2 4.8 50 69-119 27-103 (449)
420 2ekc_A AQ_1548, tryptophan syn 31.2 1.7E+02 0.0058 22.4 7.1 34 59-92 18-52 (262)
421 3p2o_A Bifunctional protein fo 31.2 33 0.0011 27.8 3.0 56 60-127 161-217 (285)
422 2bhu_A Maltooligosyltrehalose 31.2 1E+02 0.0035 26.6 6.4 52 69-120 141-213 (602)
423 4fgs_A Probable dehydrogenase 31.1 1.3E+02 0.0045 23.4 6.5 63 59-124 29-114 (273)
424 3grp_A 3-oxoacyl-(acyl carrier 31.0 1.6E+02 0.0056 21.9 7.5 61 58-124 26-112 (266)
425 3edf_A FSPCMD, cyclomaltodextr 31.0 1.3E+02 0.0045 25.7 7.0 51 69-119 145-218 (601)
426 1uuq_A Mannosyl-oligosaccharid 31.0 2E+02 0.007 23.2 7.9 52 69-121 59-132 (440)
427 4dry_A 3-oxoacyl-[acyl-carrier 31.0 86 0.003 23.7 5.3 27 58-86 32-58 (281)
428 3tva_A Xylose isomerase domain 30.8 1.5E+02 0.0051 21.8 6.5 54 70-123 49-125 (290)
429 3tov_A Glycosyl transferase fa 30.7 32 0.0011 27.2 2.9 30 58-87 185-219 (349)
430 1gwc_A Glutathione S-transfera 30.7 76 0.0026 22.5 4.7 28 72-99 16-44 (230)
431 3eeg_A 2-isopropylmalate synth 30.6 58 0.002 26.2 4.4 61 61-122 97-172 (325)
432 1h75_A Glutaredoxin-like prote 30.5 49 0.0017 19.6 3.2 33 69-103 9-41 (81)
433 3saj_A Glutamate receptor 1; r 30.5 72 0.0025 24.7 4.8 62 59-121 129-190 (384)
434 2c2x_A Methylenetetrahydrofola 30.5 34 0.0012 27.7 3.0 58 60-127 160-217 (281)
435 3vtz_A Glucose 1-dehydrogenase 30.4 1.7E+02 0.0057 21.8 9.5 65 57-125 12-93 (269)
436 1to3_A Putative aldolase YIHT; 30.3 1.7E+02 0.0059 23.2 7.2 58 60-117 126-194 (304)
437 3pk0_A Short-chain dehydrogena 30.3 1.6E+02 0.0056 21.6 8.7 27 58-86 9-35 (262)
438 4glt_A Glutathione S-transfera 30.3 23 0.00079 25.7 1.8 29 72-100 32-60 (225)
439 3on1_A BH2414 protein; structu 30.2 81 0.0028 20.8 4.5 30 60-90 36-65 (101)
440 1no5_A Hypothetical protein HI 30.2 1.2E+02 0.0041 20.1 6.8 68 57-129 45-112 (114)
441 3tva_A Xylose isomerase domain 30.1 92 0.0031 23.0 5.2 48 71-118 101-157 (290)
442 1htt_A Histidyl-tRNA synthetas 30.0 1.5E+02 0.0052 23.8 6.9 57 59-120 328-386 (423)
443 3l07_A Bifunctional protein fo 29.9 36 0.0012 27.5 3.1 46 73-127 173-218 (285)
444 3cs3_A Sugar-binding transcrip 29.9 1.6E+02 0.0054 21.3 8.8 62 59-122 119-186 (277)
445 1sqs_A Conserved hypothetical 29.8 1.7E+02 0.0057 21.5 6.8 34 60-95 3-41 (242)
446 1o97_C Electron transferring f 29.7 1.7E+02 0.0058 22.8 6.9 60 60-123 59-122 (264)
447 4da9_A Short-chain dehydrogena 29.7 1.8E+02 0.006 21.8 8.9 26 59-86 29-54 (280)
448 2xvl_A Alpha-xylosidase, putat 29.6 1.5E+02 0.005 28.1 7.5 86 21-120 408-510 (1020)
449 1lng_A SRP19, signal recogniti 29.5 21 0.00072 24.1 1.4 22 70-91 27-48 (87)
450 3fj1_A Putative phosphosugar i 29.4 1.8E+02 0.0062 23.1 7.2 63 60-122 206-290 (344)
451 2qf7_A Pyruvate carboxylase pr 29.4 1.2E+02 0.0041 28.7 6.9 60 62-122 662-730 (1165)
452 3pxx_A Carveol dehydrogenase; 29.3 1.7E+02 0.0058 21.5 10.5 27 58-86 9-35 (287)
453 1xov_A PLY protein, plypsa; al 29.3 1.3E+02 0.0043 24.5 6.3 48 71-120 40-90 (326)
454 2ht9_A Glutaredoxin-2; thiored 29.2 1.1E+02 0.0037 21.4 5.2 57 60-118 50-108 (146)
455 3tbf_A Glucosamine--fructose-6 29.1 2.2E+02 0.0076 22.8 8.3 61 60-120 228-310 (372)
456 1kvn_A SRP19; RNA binding prot 29.1 22 0.00077 24.8 1.5 22 70-91 30-51 (104)
457 1hjs_A Beta-1,4-galactanase; 4 29.1 1.4E+02 0.0048 23.7 6.5 43 77-120 32-80 (332)
458 4imr_A 3-oxoacyl-(acyl-carrier 29.0 1.8E+02 0.0062 21.7 7.0 26 59-86 33-58 (275)
459 3t4x_A Oxidoreductase, short c 28.9 1.7E+02 0.006 21.5 7.4 26 59-86 10-35 (267)
460 3ot5_A UDP-N-acetylglucosamine 28.9 31 0.0011 27.9 2.5 38 60-97 29-68 (403)
461 1v2a_A Glutathione transferase 28.9 1.1E+02 0.0038 21.3 5.3 46 72-118 10-55 (210)
462 1edz_A 5,10-methylenetetrahydr 28.8 75 0.0026 25.9 4.9 51 58-111 37-88 (320)
463 3un1_A Probable oxidoreductase 28.8 1.8E+02 0.0061 21.5 8.4 63 59-125 28-108 (260)
464 3h6g_A Glutamate receptor, ion 28.8 70 0.0024 24.6 4.5 59 59-121 139-199 (395)
465 3ucq_A Amylosucrase; thermosta 28.8 86 0.0029 27.3 5.5 51 69-119 108-180 (655)
466 3v7q_A Probable ribosomal prot 28.7 90 0.0031 20.7 4.5 30 60-90 37-66 (101)
467 1r5a_A Glutathione transferase 28.7 60 0.0021 22.9 3.8 25 72-96 12-36 (218)
468 1yb1_A 17-beta-hydroxysteroid 28.7 1.8E+02 0.006 21.5 8.8 26 58-85 30-55 (272)
469 1lxn_A Hypothetical protein MT 28.6 44 0.0015 22.7 2.9 44 66-109 14-60 (99)
470 3obe_A Sugar phosphate isomera 28.5 1.9E+02 0.0067 21.9 7.0 47 71-118 113-168 (305)
471 3oec_A Carveol dehydrogenase ( 28.5 2E+02 0.0068 22.0 9.6 27 58-86 45-71 (317)
472 1lxj_A YBL001C, hypothetical 1 28.5 53 0.0018 22.5 3.4 44 66-109 18-63 (104)
473 3c5y_A Ribose/galactose isomer 28.4 1.4E+02 0.0048 23.6 6.2 70 59-130 20-107 (231)
474 3h5t_A Transcriptional regulat 28.3 1.8E+02 0.0061 22.1 6.7 90 28-120 39-135 (366)
475 3g85_A Transcriptional regulat 28.2 23 0.00078 25.9 1.5 62 57-120 10-75 (289)
476 3ek2_A Enoyl-(acyl-carrier-pro 28.2 1.7E+02 0.0058 21.1 8.2 65 57-125 12-104 (271)
477 3s5p_A Ribose 5-phosphate isom 28.1 1.7E+02 0.0058 22.0 6.3 68 63-130 24-102 (166)
478 3lyp_A Stringent starvation pr 28.0 79 0.0027 22.2 4.4 24 72-95 18-41 (215)
479 1gte_A Dihydropyrimidine dehyd 28.0 1.5E+02 0.0052 27.2 7.2 59 59-118 636-708 (1025)
480 3i09_A Periplasmic branched-ch 27.9 1.8E+02 0.0061 22.0 6.6 60 60-121 142-203 (375)
481 3gem_A Short chain dehydrogena 27.9 1.9E+02 0.0063 21.5 6.9 62 59-124 27-110 (260)
482 3ipc_A ABC transporter, substr 27.9 1.3E+02 0.0043 22.5 5.7 101 4-121 100-201 (356)
483 2es9_A Putative cytoplasmic pr 27.8 23 0.00079 25.2 1.4 23 67-89 31-53 (115)
484 3cbu_A Probable GST-related pr 27.8 66 0.0023 22.4 3.9 29 72-100 12-41 (214)
485 3o26_A Salutaridine reductase; 27.8 1.8E+02 0.0061 21.3 6.6 27 58-86 11-37 (311)
486 3orf_A Dihydropteridine reduct 27.7 1.8E+02 0.0061 21.2 8.3 62 59-124 22-98 (251)
487 4dyv_A Short-chain dehydrogena 27.6 1.9E+02 0.0066 21.6 7.1 60 59-124 28-113 (272)
488 1aw9_A Glutathione S-transfera 27.5 49 0.0017 23.2 3.1 24 72-95 12-35 (216)
489 2jah_A Clavulanic acid dehydro 27.4 1.8E+02 0.0061 21.1 8.8 26 99-124 68-95 (247)
490 3gtu_B Glutathione S-transfera 27.4 78 0.0027 22.5 4.3 32 72-103 15-51 (224)
491 3av3_A Phosphoribosylglycinami 27.3 2E+02 0.0067 21.5 7.0 45 77-121 45-90 (212)
492 3f4w_A Putative hexulose 6 pho 27.2 1.3E+02 0.0044 21.5 5.5 24 67-90 85-108 (211)
493 3lyk_A Stringent starvation pr 27.1 96 0.0033 21.8 4.7 28 72-99 16-44 (216)
494 2bd0_A Sepiapterin reductase; 27.1 1.7E+02 0.0058 20.8 8.7 28 97-124 68-97 (244)
495 2rk3_A Protein DJ-1; parkinson 27.0 1.7E+02 0.0058 20.8 6.2 37 59-97 4-40 (197)
496 2p6n_A ATP-dependent RNA helic 27.0 1.7E+02 0.0059 20.8 7.9 57 59-120 55-111 (191)
497 3jyw_G 60S ribosomal protein L 27.0 77 0.0026 22.1 4.0 32 59-90 42-73 (113)
498 1oyj_A Glutathione S-transfera 27.0 95 0.0032 22.2 4.7 29 72-100 16-45 (231)
499 3op4_A 3-oxoacyl-[acyl-carrier 26.9 1.9E+02 0.0063 21.1 8.4 61 59-125 9-95 (248)
500 1g94_A Alpha-amylase; beta-alp 26.9 47 0.0016 27.1 3.3 28 92-119 57-84 (448)
No 1
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=99.97 E-value=1.2e-32 Score=215.55 Aligned_cols=77 Identities=39% Similarity=0.646 Sum_probs=72.6
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 55 ~~~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
..++|+|+|||||+|||++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 19 ~~mkp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvv 95 (181)
T 4b4k_A 19 SHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 95 (181)
T ss_dssp ---CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCCccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.8e-32 Score=235.15 Aligned_cols=117 Identities=17% Similarity=0.185 Sum_probs=91.6
Q ss_pred CCCCcccceeecceeeecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 032873 6 KRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFG 85 (131)
Q Consensus 6 ~~~~~~~qvyrghitVt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS~SDl~~~~ka~~~L~~fG 85 (131)
+++.-+||+||..-++|..++.+++.+|+|+++.+... .+ +...++|+|||||+||+++|++|+.+|++||
T Consensus 222 ~~~~~DK~~~R~~~~~~~~~l~~v~~~Y~eVa~rL~i~--------~~-~~~~~~V~Ii~gs~SD~~~~~~a~~~l~~~g 292 (425)
T 2h31_A 222 RSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVELL--------LK-SESQCRVVVLMGSTSDLGHCEKIKKACGNFG 292 (425)
T ss_dssp -----------------CCSSSCCCCCHHHHHTTGGGG--------GS-CSCCCEEEEEESCGGGHHHHHHHHHHHHHTT
T ss_pred CCCcccHHHHHhccccchhhHHHHHHHHHHHHHHhhcc--------cC-ccCCCeEEEEecCcccHHHHHHHHHHHHHcC
Confidence 36678999999999999999999999999999888543 11 2234799999999999999999999999999
Q ss_pred CCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEEEecCcCCcCcCCC
Q 032873 86 VPYEIKILPPHQNCKEALSYALSAKERGI-KIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 86 I~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViIA~AG~aAhLpGvv 131 (131)
|+||++|+||||+|+++.+|+++++++|. +||||+|||+|||||||
T Consensus 293 i~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvv 339 (425)
T 2h31_A 293 IPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVM 339 (425)
T ss_dssp CCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHH
T ss_pred CceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHH
Confidence 99999999999999999999999999999 69999999999999985
No 3
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=99.97 E-value=9e-32 Score=209.31 Aligned_cols=77 Identities=45% Similarity=0.778 Sum_probs=73.7
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 55 ~~~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
++..|+|+|||||+|||++|++|+++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 9 ~~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvv 85 (173)
T 4grd_A 9 THSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGML 85 (173)
T ss_dssp CCSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHH
T ss_pred CCCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhh
Confidence 34558999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=99.96 E-value=8.4e-31 Score=203.38 Aligned_cols=75 Identities=39% Similarity=0.655 Sum_probs=72.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
+.|+|+|||||+|||++|++|+++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 10 ~~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 84 (170)
T 1xmp_A 10 MKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 84 (170)
T ss_dssp -CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 558999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=99.96 E-value=1.3e-30 Score=202.10 Aligned_cols=74 Identities=38% Similarity=0.656 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
.|+|+|||||+||+++|++++++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 6 ~~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 79 (169)
T 3trh_A 6 KIFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTI 79 (169)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHH
T ss_pred CCcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999985
No 6
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=99.96 E-value=1.4e-30 Score=202.83 Aligned_cols=77 Identities=31% Similarity=0.551 Sum_probs=73.9
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 55 ~~~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
-.+.|+|+|||||+||+++|++++++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 9 ~~m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 85 (174)
T 3kuu_A 9 YAAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGML 85 (174)
T ss_dssp SCCCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHH
T ss_pred ccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 44668999999999999999999999999999999999999999999999999999999999999999999999985
No 7
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=99.96 E-value=1e-30 Score=201.80 Aligned_cols=74 Identities=39% Similarity=0.647 Sum_probs=71.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
.++|+|||||+|||++|++++++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 3 ~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 76 (163)
T 3ors_A 3 AMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMV 76 (163)
T ss_dssp CCCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999985
No 8
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=99.96 E-value=9.6e-31 Score=202.43 Aligned_cols=75 Identities=37% Similarity=0.654 Sum_probs=72.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
+.|+|+|||||+||+++|++++++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 4 m~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 78 (166)
T 3oow_A 4 MSVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMV 78 (166)
T ss_dssp -CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999999999985
No 9
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=99.96 E-value=2e-30 Score=199.43 Aligned_cols=74 Identities=28% Similarity=0.385 Sum_probs=70.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC-CCeEEEEecCcCCcCcCCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~-g~~ViIA~AG~aAhLpGvv 131 (131)
.|+|+|||||+||+++|++|+++|++|||+||++|+||||+|+++.+|+++++++ |++||||+||++|||||||
T Consensus 2 ~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~Lpgvv 76 (159)
T 3rg8_A 2 RPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFV 76 (159)
T ss_dssp CCEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHH
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHH
Confidence 3689999999999999999999999999999999999999999999999988875 7999999999999999985
No 10
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=99.96 E-value=1.5e-30 Score=203.77 Aligned_cols=74 Identities=41% Similarity=0.638 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
.++|+|||||+|||++|++++++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 21 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 94 (182)
T 1u11_A 21 APVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMC 94 (182)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999985
No 11
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=99.96 E-value=1.5e-30 Score=202.62 Aligned_cols=75 Identities=44% Similarity=0.783 Sum_probs=72.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
+.|+|+|||||+||+++|++|+++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 6 ~~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 80 (174)
T 3lp6_A 6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMV 80 (174)
T ss_dssp CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHH
T ss_pred CCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999999999999999985
No 12
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=99.96 E-value=4e-30 Score=201.50 Aligned_cols=73 Identities=52% Similarity=0.859 Sum_probs=71.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
|+|+|||||+||+++|++|+++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 14 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 86 (183)
T 1o4v_A 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMV 86 (183)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999985
No 13
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=3.7e-28 Score=186.53 Aligned_cols=69 Identities=29% Similarity=0.528 Sum_probs=65.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcCCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGTL 131 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpGvv 131 (131)
+|+|||||+||+++|++|+++|++|||+||++|+||||+|+++.+|++++++ +||||+||++|||||||
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvv 69 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVV 69 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHH
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHH
Confidence 4899999999999999999999999999999999999999999999987755 99999999999999985
No 14
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=95.20 E-value=0.026 Score=47.15 Aligned_cols=66 Identities=12% Similarity=0.073 Sum_probs=51.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.++.||++..+-....++..+.|++ |+.+.+.....+-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~ 118 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKT 118 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHH
Confidence 4799999998876688899999999 99986667778888899999998888888999999999874
No 15
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=94.88 E-value=0.036 Score=45.19 Aligned_cols=67 Identities=13% Similarity=0.018 Sum_probs=54.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.|+++..+.....++..+.|++-|+++.+.+.+-+-+-+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv 98 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKT 98 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 3799999887766678899999999999886556666666667888888888889999999999864
No 16
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=94.31 E-value=0.071 Score=43.77 Aligned_cols=67 Identities=12% Similarity=0.135 Sum_probs=54.0
Q ss_pred CeEEEEeccCCCHH---HHHHHHHHHHHhCCCeeE-EEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLP---VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~---~~~ka~~~L~~fGI~~ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.|+++..+-.. ..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.++++|||+-|+|.
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 104 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSP 104 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcch
Confidence 37999998877655 899999999999987632 22358888999999999998999999999999864
No 17
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=93.76 E-value=0.15 Score=41.72 Aligned_cols=67 Identities=9% Similarity=0.155 Sum_probs=54.3
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeE-EEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~--~~~ka~~~L~~fGI~~ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.++.||+|..+-.. ..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 110 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSP 110 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 37999998755333 789999999999987643 22458999999999999998889999999999863
No 18
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=93.57 E-value=0.22 Score=42.06 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=57.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCC---eEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~---~ViIA~AG~aA 125 (131)
.+|.||++....-...+++.+.|++.|+++++.+.. ++++.+.+.+..+.+.+.++ +++||+-|++.
T Consensus 63 ~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv 135 (390)
T 3okf_A 63 QKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVI 135 (390)
T ss_dssp CEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcHH
Confidence 479999999987779999999999999998876664 57888999999988888888 69999998863
No 19
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=93.16 E-value=0.13 Score=41.70 Aligned_cols=65 Identities=9% Similarity=-0.007 Sum_probs=53.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
++.|+++..+.....++..+.|++-|+++.+..--.+-+.+.+.+. +.+.+.++++|||+-|++.
T Consensus 36 ~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 36 RVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKA 100 (354)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHH
T ss_pred eEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHH
Confidence 7999999877667889999999999998865542467788888888 8787888999999999863
No 20
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=93.13 E-value=0.11 Score=43.01 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=53.6
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl-~~~~ka~~~L~~fGI~~ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.|++|..-.. ...++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.++++|||+-|+|.
T Consensus 32 ~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 100 (383)
T 3ox4_A 32 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSP 100 (383)
T ss_dssp CEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHH
Confidence 3789998864221 2578889999999998753 34568999999999999888889999999999874
No 21
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=92.36 E-value=0.12 Score=42.33 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=52.5
Q ss_pred eEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDL-PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl-~~~~ka~~~L~~fGI~~ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+|.|+++..... ...++..+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++|||+-|+|.
T Consensus 33 ~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 100 (386)
T 1rrm_A 33 KALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSP 100 (386)
T ss_dssp EEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred EEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHH
Confidence 788998765532 3788999999999987642 22457888999999999888889999999999864
No 22
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=92.31 E-value=0.12 Score=44.10 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=52.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+|.||++..+.....++..+.|++-|+.+.+.+.+-+-+-+.+.+.++.+.+ ++++|||+-|++.
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSv 157 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKT 157 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHH
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHH
Confidence 7999998877666788999999999998866666666666677777776767 8999999999864
No 23
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=92.25 E-value=0.34 Score=40.14 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=51.7
Q ss_pred CeEEEEeccCCCH--HHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl--~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.||+|..+=. ...+++.+.|++-|+.+. +.+ ++.+.+.+.+.++.+.+.++++|||+-|+|.
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 3799999854322 368899999999898764 444 4788889999999888999999999999864
No 24
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=92.16 E-value=0.26 Score=40.78 Aligned_cols=67 Identities=7% Similarity=0.027 Sum_probs=53.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh------CCCeeEEEEcC---CCChHHHHHHHHHHhhCC--C---eEEEEecCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDF------GVPYEIKILPP---HQNCKEALSYALSAKERG--I---KIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~f------GI~~ev~V~SA---HRtp~~~~~~~~~~~~~g--~---~ViIA~AG~a 124 (131)
.++.|+++........++..+.|++. |+.+...++.. +++.+.+.+..+.+.+.| + +++||+-|++
T Consensus 37 ~k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGs 116 (393)
T 1sg6_A 37 TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGV 116 (393)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcH
Confidence 37999998765444788888888877 77776566666 888899999998888888 8 9999999876
Q ss_pred C
Q 032873 125 A 125 (131)
Q Consensus 125 A 125 (131)
.
T Consensus 117 v 117 (393)
T 1sg6_A 117 I 117 (393)
T ss_dssp H
T ss_pred H
Confidence 3
No 25
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=90.54 E-value=1.4 Score=36.12 Aligned_cols=65 Identities=17% Similarity=0.114 Sum_probs=47.2
Q ss_pred CCCeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIME-SDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimG-S~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+..+|++|.- +-+| ..+.+-+.+..+++|-.+++.++.....+++..++++.+.++|+++||+..
T Consensus 25 ~~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g 94 (356)
T 3s99_A 25 EKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTS 94 (356)
T ss_dssp -CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECS
T ss_pred CCCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 3457988883 3557 345566666778899677888777666666678888888889999988864
No 26
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.16 E-value=1.4 Score=30.10 Aligned_cols=57 Identities=4% Similarity=-0.038 Sum_probs=38.6
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.|-++ +.=|.|.+|.+.|++.||+|+..=+..+ |+...++.+....+.+ .|||
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d--~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSD--EEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC--HHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcCC--HHHHHHHHHHHCCCCCCEEEE
Confidence 577777533 6679999999999999999987655543 5555555443333333 6666
No 27
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=90.09 E-value=3 Score=30.81 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=49.6
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++-+.+|- ...+.+.+.++++|+ ++.+...+..+++..++++....++++.||....
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 70 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG 70 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 345899999877663 456778888888985 6677788889999888888888888988886543
No 28
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=89.92 E-value=2.5 Score=32.46 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=49.0
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++.+.++ ...++.+.+.+++.|. ++.+...+..+++..++++....++++-||...
T Consensus 62 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 126 (339)
T 3h5o_A 62 SRTVLVLIPSLANTVFLETLTGIETVLDAAGY--QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITG 126 (339)
T ss_dssp -CEEEEEESCSTTCTTHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeC
Confidence 3579999977665 5677888888999885 667788899999999999888888887777654
No 29
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=89.59 E-value=1.6 Score=29.39 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=38.4
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.+-++ ..=|.|+++.+.|++.||+|+..=+.- .|+...++.+....+.+ .|||
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~--~~~~~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILE--NEMLRQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHHHHTCSSSCEEEE
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCC--CHHHHHHHHHHHCCCCCCeEEE
Confidence 587887664 367899999999999999998665543 45544444443333333 5666
No 30
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=89.30 E-value=3.8 Score=31.33 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=48.8
Q ss_pred ceeecceeeecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEecc--CCC---HHHHHHHHHHHHHhCCC
Q 032873 13 TVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMES--DLD---LPVMNDAARTLSDFGVP 87 (131)
Q Consensus 13 qvyrghitVt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS--~SD---l~~~~ka~~~L~~fGI~ 87 (131)
.|.+|+-.|.. +-+++....++++......... .........|++++.+ .++ ....+.+.+.+++.|.
T Consensus 22 rvln~~~~vs~----~tr~rV~~~a~~lgY~pn~~a~--~l~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~- 94 (338)
T 3dbi_A 22 RVLSGNGYVSQ----ETKDRVFQAVEESGYRPNLLAR--NLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR- 94 (338)
T ss_dssp --------------------------------------------CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTC-
T ss_pred HHHCCCCCCCH----HHHHHHHHHHHHHCCCcCHHHH--HhhhCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCC-
Confidence 34445444443 3445555556665543110000 0012234689999987 444 3566777788888885
Q ss_pred eeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 88 YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 88 ~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
++.+...+..++...++++....++++-||....
T Consensus 95 -~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 128 (338)
T 3dbi_A 95 -QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 128 (338)
T ss_dssp -EEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred -EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 6677778889998888888888888988776543
No 31
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=89.11 E-value=0.41 Score=39.60 Aligned_cols=63 Identities=13% Similarity=0.155 Sum_probs=48.1
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~--~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.||+|..+-.. ..++..+.|+ |+++ .+.+ ++.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~--~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDV--LEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSV 118 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEE--EEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEE--EEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchH
Confidence 47999998764333 6777777776 7654 3443 5788889999998888889999999999864
No 32
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=89.06 E-value=3.8 Score=30.39 Aligned_cols=64 Identities=13% Similarity=0.131 Sum_probs=50.6
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++.+.++ ....+.+.+.++++|+ ++.+...+..+++..++++....++++-||....
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPS 73 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 34689999988777 3556677778888884 6777888889999999998888888988886543
No 33
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=89.03 E-value=0.43 Score=39.15 Aligned_cols=64 Identities=8% Similarity=0.009 Sum_probs=47.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+|.|++|... ....++..+.|++.++.+ +.-...+.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 36 r~liVtd~~~-~~~~~~v~~~L~~~~~~v-~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 99 (353)
T 3hl0_A 36 RALVLSTPQQ-KGDAEALASRLGRLAAGV-FSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGST 99 (353)
T ss_dssp CEEEECCGGG-HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred EEEEEecCch-hhHHHHHHHHHhhCCcEE-ecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHH
Confidence 6889998764 567888888888754321 111235777788888888888899999999999874
No 34
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=88.42 E-value=1.7 Score=35.52 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=52.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCC---CeEEEEecCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g---~~ViIA~AG~a 124 (131)
.+|.|++++.......++..+.|++- +.++..+.. .+++.+.+.+..+.+.+.| .+++||+-|++
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGs 105 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGL 105 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChH
Confidence 47999999988777888888888776 777655554 6778888888887777767 69999998875
No 35
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=88.22 E-value=3.7 Score=31.58 Aligned_cols=62 Identities=11% Similarity=0.049 Sum_probs=48.0
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++.+.++ ....+.+.+.++++|. ++.+...+..+++..++++....++++-+|...
T Consensus 68 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~ 132 (344)
T 3kjx_A 68 VNLVAVIIPSLSNMVFPEVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAG 132 (344)
T ss_dssp CSEEEEEESCSSSSSHHHHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEEC
Confidence 4589999987766 4556677777788875 566778888999999999888888888777654
No 36
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=88.16 E-value=0.21 Score=40.94 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCCCCCCCcccceeecceeeecCChHHHhhcccccccccCC
Q 032873 2 FNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREP 42 (131)
Q Consensus 2 ~~~~~~~~~~~qvyrghitVt~~~l~~vk~~~~~v~~~~~~ 42 (131)
|..+.||.+ + +||+|++++|.++++++++.+.+.+..
T Consensus 305 ygk~~r~~r--k--mGhv~~~~~~~~~~~~~~~~~~~~~~~ 341 (355)
T 3eth_A 305 YDKEVRPGR--K--VGHLNLTDSDTSRLTATLEALIPLLPP 341 (355)
T ss_dssp CCCCCCTTC--E--EEEEEEECSCHHHHHHHHHHHGGGSCG
T ss_pred cCCCCCCCC--e--eEEEEEEcCCHHHHHHHHHHHHHHhhh
Confidence 455789986 6 899999999999999999988766543
No 37
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=87.92 E-value=1.6 Score=27.65 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC---CChHHHHHHHHHHhhC
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPH---QNCKEALSYALSAKER 112 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAH---Rtp~~~~~~~~~~~~~ 112 (131)
-=+.|.+|.+.|++.||+|+..=+..+ ..|+...++.+....+
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 558999999999999999987666533 4566666666544444
No 38
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=87.54 E-value=0.58 Score=38.50 Aligned_cols=64 Identities=13% Similarity=0.033 Sum_probs=47.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+|.||+|... ....++..+.|++.++. .+.-...|.+.+.+.+.++.+.+.++++|||+-|+|.
T Consensus 38 r~liVtd~~~-~~~~~~v~~~L~~~~~~-~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 101 (358)
T 3jzd_A 38 RALVLCTPNQ-QAEAERIADLLGPLSAG-VYAGAVMHVPIESARDATARAREAGADCAVAVGGGST 101 (358)
T ss_dssp CEEEECCGGG-HHHHHHHHHHHGGGEEE-EECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred eEEEEeCCcH-HHHHHHHHHHhccCCEE-EecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHH
Confidence 6899998865 56778888888765421 1112336777788888888888888999999999874
No 39
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=87.26 E-value=0.93 Score=37.78 Aligned_cols=66 Identities=14% Similarity=0.078 Sum_probs=51.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCC---CeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g---~~ViIA~AG~aA 125 (131)
.+|.|+++..... ..++..+.|++-|+++++.+.. .+++.+.+.+..+.+.+.| .+++||+-|++.
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGsv 115 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAA 115 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHHH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChHH
Confidence 4799999998754 5889999999999988776654 5677788888877666544 599999999863
No 40
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=86.95 E-value=5.4 Score=29.48 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=49.4
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCC--ChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHR--tp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+...|++++-+.+|- ...+.+.+.++++|+ ++.+...+. .+++..++++....++++.||.......
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~ 75 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPH 75 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTT
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh
Confidence 335899999887763 445667777888885 666777777 8888888888887888988887654433
No 41
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=86.86 E-value=5.3 Score=30.93 Aligned_cols=62 Identities=11% Similarity=0.123 Sum_probs=47.4
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++.+.++. ...+.+.+.+++.|. ++.+...+..+++..++++....++++-+|...
T Consensus 70 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 134 (355)
T 3e3m_A 70 SGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQLVETMLRRRPEAMVLSY 134 (355)
T ss_dssp -CEEEEEESCSBCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 45799999887764 455667777888885 667778888999988999888888888777654
No 42
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=86.78 E-value=4.7 Score=30.34 Aligned_cols=62 Identities=8% Similarity=0.110 Sum_probs=49.0
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCC---CeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGV---PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI---~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|+|+. +-++ -..++.+.+.|++.|. ...+.++.++..+++..++++...+++++.||+..
T Consensus 3 ~~Igvi~-~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 70 (295)
T 3lft_A 3 AKIGVLQ-FVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIA 70 (295)
T ss_dssp EEEEEEE-CSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEES
T ss_pred eEEEEEE-ccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3688883 3333 3456778888899998 77788889999999999999888888899998764
No 43
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=86.15 E-value=0.77 Score=28.43 Aligned_cols=50 Identities=10% Similarity=0.028 Sum_probs=36.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.|.+..- +.=+.|+++...|++.|++|+..-+.....+....++.+....
T Consensus 5 ~v~ly~~--~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~ 54 (89)
T 3msz_A 5 KVKIYTR--NGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGK 54 (89)
T ss_dssp CEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTC
T ss_pred EEEEEEc--CCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCC
Confidence 3444433 3459999999999999999998877776666666666654433
No 44
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=86.15 E-value=8.7 Score=28.80 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=48.2
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
..|++++-+.++ ....+.+.+.++++|+ ++.+......++...++++....++++.||.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 478888876443 4567777888889985 66677788889888888888888889888876544
No 45
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=85.88 E-value=0.76 Score=37.27 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=45.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCC---eEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~---~ViIA~AG~aA 125 (131)
++.|+++........++..+.| +-| .+++.+.+ ++.+.+.+.+..+.+.+.|+ +++||+-|++.
T Consensus 33 ~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv 102 (354)
T 1xah_A 33 QSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGAT 102 (354)
T ss_dssp CEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHH
T ss_pred eEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHH
Confidence 6888887654444677777777 777 66666654 57889999999988888888 89999999863
No 46
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.47 E-value=2.1 Score=34.80 Aligned_cols=62 Identities=10% Similarity=-0.025 Sum_probs=49.2
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh-HHHHHHHHHHhhCCCeEEEEecCc
Q 032873 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 61 V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp-~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
+..|.-+.||.+.++++.+.+++.|+.+++.+..++|++ +++.++++.+.+-|+.+ |..++.
T Consensus 109 ~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT 171 (345)
T 1nvm_A 109 VVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADS 171 (345)
T ss_dssp EEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECT
T ss_pred EEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCC
Confidence 334446889999999999999999999999998899885 77888998888877764 444443
No 47
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=85.05 E-value=8.6 Score=29.33 Aligned_cols=63 Identities=8% Similarity=0.102 Sum_probs=45.7
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
....|++++...++- ...+.+.+.+++.|. ++.+...+..+++..++++....++++-+|...
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 127 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKY--NMILANSDNDVEKEEKVLETFLSKQVDGIVYMG 127 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECS
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEECCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 345899999765552 455566777788885 556667777888888888877778888777654
No 48
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=85.01 E-value=9 Score=28.15 Aligned_cols=64 Identities=13% Similarity=0.198 Sum_probs=48.2
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++.+.+| ....+.+.+.+++.| |++.+...+..++...++++....++++-||....
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 72 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRG--YIGVLFDANADIEREKTLLRAIGSRGFDGLILQSF 72 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTT--CEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESS
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCC--CEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 44689999988766 344556667777887 46777888888988888888888888887776643
No 49
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=84.99 E-value=3.5 Score=28.64 Aligned_cols=54 Identities=15% Similarity=0.029 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
.++++.+.|++.|+++++++.-.+-.|. ..+++.+++.+++.+|.++-+...+.
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~v~~G~~~--~~I~~~a~~~~~DLIV~G~~g~~~~~ 132 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVRGKEPP--DDIVDFADEVDAIAIVIGIRKRSPTG 132 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSSCHH--HHHHHHHHHTTCSEEEEECCEECTTS
T ss_pred HHHHHHHHHHhcCCCceEEEEecCCCHH--HHHHHHHHHcCCCEEEECCCCCCCCC
Confidence 3455666777789999887654554553 45666777788999998876555443
No 50
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=84.92 E-value=3.7 Score=28.38 Aligned_cols=58 Identities=10% Similarity=0.030 Sum_probs=37.9
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCC---eeEEEEcCCCChHHHHHHHHHHhhCCC-eEEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGI-KIIIV 119 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~---~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViIA 119 (131)
.|.|+|-|+ ..=|.|.++.++|+++||+ |+..=+. ..++....+.+....+.+ .|||-
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~~~~l~~~sg~~tvP~vfI~ 81 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL--EDPELREGIKEFSEWPTIPQLYVN 81 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT--TCHHHHHHHHHHHTCCSSCEEEET
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec--CCHHHHHHHHHHhCCCCCCeEEEC
Confidence 588888775 3578999999999999999 6543333 445554544443333333 67763
No 51
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=84.89 E-value=4.5 Score=28.06 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=37.9
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCC-eeEEEEcCCCChHHHHHHHHHHhhCC-CeEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERG-IKIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~-~ev~V~SAHRtp~~~~~~~~~~~~~g-~~ViI 118 (131)
.|.|+|-|+ ..=|.|+++.+.|+++||+ |+..=+.- .|+...++.+....+. ..|||
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC--CHHHHHHHHHHhCCCCcCeEEE
Confidence 588888764 3578999999999999996 87665553 4554444444333332 36665
No 52
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=84.76 E-value=7.2 Score=29.75 Aligned_cols=61 Identities=8% Similarity=0.128 Sum_probs=45.1
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++...++- ...+.+.+.+++.|. ++.+...+..+++..++++....++++-+| ..
T Consensus 60 ~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~ 123 (330)
T 3ctp_A 60 SKTIGLMVPNISNPFFNQMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTYLEVLQSHRVAGII-AS 123 (330)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEE-EE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEE-EC
Confidence 45799999765552 355666777888885 556667777888888888887788898888 54
No 53
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=84.75 E-value=4.4 Score=31.27 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=50.3
Q ss_pred CCCeEEEEe-ccCCCHHHHHH-HHHHHHHhCC----CeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIM-ESDLDLPVMND-AARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~Iim-GS~SDl~~~~k-a~~~L~~fGI----~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+..+|+|+- -.+--|+-+++ ..+.|++.|. ++++.+..|...+....++++...++++++||+++-
T Consensus 7 ~~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t 78 (302)
T 3lkv_A 7 KTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIAT 78 (302)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESH
T ss_pred CCceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCC
Confidence 446899872 23333544443 5667888764 588999999999999999998888899999998864
No 54
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=84.55 E-value=9.8 Score=27.90 Aligned_cols=63 Identities=10% Similarity=0.149 Sum_probs=45.6
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++.+.++- ...+.+.+.+++.|. ++.+......+++..++++....++++.+|....
T Consensus 7 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 72 (289)
T 1dbq_A 7 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCS 72 (289)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEec
Confidence 35799999765552 355666777888885 5566677788888888888777788887776543
No 55
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=83.72 E-value=11 Score=27.69 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=48.9
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
+...|++++.+.++ ....+.+.+.++++|+ ++.+...+..++...++++....++++.||.....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 34689999988776 3445667777888876 66677888899988899988888889888876543
No 56
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=83.60 E-value=6.9 Score=30.11 Aligned_cols=62 Identities=13% Similarity=0.079 Sum_probs=46.4
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
....|++++.+.+|. ...+.+.+.++++|. ++.+...+. ++...++++....++++-+|...
T Consensus 63 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~ 127 (333)
T 3jvd_A 63 RSALVGVIVPDLSNEYYSESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVVMESLISIQAAGIIHVP 127 (333)
T ss_dssp -CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcc
Confidence 345799999887773 456677788888985 666777777 88888888887777887777654
No 57
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=83.58 E-value=10 Score=27.35 Aligned_cols=61 Identities=11% Similarity=0.045 Sum_probs=45.4
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|++++.+.+| ....+.+.+.+++.|. .+.+...+..+++..++++....++++-+|...
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 66 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFG 66 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 479999877666 3456677778888885 566667777888888888888778887776654
No 58
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=83.56 E-value=7.7 Score=29.72 Aligned_cols=61 Identities=15% Similarity=0.183 Sum_probs=42.4
Q ss_pred CeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIME-SDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimG-S~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|++|.- .-+| ..+.+.+.+.++++|+ ++.++.....+++..++++...+++++.||...
T Consensus 6 ~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~ 71 (296)
T 2hqb_A 6 GMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHG 71 (296)
T ss_dssp CEEEEECCCC----CCTHHHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred cEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 47888884 3455 3456677778889985 566666666666677788888888999988764
No 59
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=83.40 E-value=12 Score=28.48 Aligned_cols=64 Identities=14% Similarity=0.063 Sum_probs=45.5
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEE-cCCCChHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~-SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
.+|++++-..++- ...+.+.+.++++| |++.+. .+...++.-.+.++.+-.++++.||......
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~ 71 (316)
T 1tjy_A 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALG--IDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSP 71 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHT--CEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSS
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHhC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 4799998765552 23345556677888 566665 4778888888888888888999888765433
No 60
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=83.25 E-value=12 Score=27.60 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=44.0
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
..|+++....+| ....+.+.+.+++.|. ++.+....-.+++..++++....++++.+|....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 478888876555 2445566677788885 5556667778888888887777778887776544
No 61
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=83.20 E-value=3.5 Score=27.40 Aligned_cols=57 Identities=12% Similarity=0.088 Sum_probs=37.5
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.+-+. +.=+.|+++...|+++||+|+..=+.. .|+...++.+....+.+ .|||
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~--~~~~~~~l~~~~g~~~vP~ifi 76 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKTFSNWPTYPQLYV 76 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS--CHHHHHHHHHHHSCCSSCEEEC
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC--CHHHHHHHHHHhCCCCCCEEEE
Confidence 466666533 555799999999999999988665554 46555555544433444 5554
No 62
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=82.94 E-value=8.8 Score=28.59 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=49.7
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++.+.++ ....+.+.+.+++.|. ++.+...+..++...++++....++++-+|...
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 78 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVT 78 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 34589999987665 2788888999999985 666777888899888899888888887777543
No 63
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=82.89 E-value=12 Score=27.65 Aligned_cols=64 Identities=14% Similarity=0.188 Sum_probs=47.0
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++-+.++ ....+.+.+.+++.|+ ++.+...+..+++..++++....++++-+|....
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 85 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTS 85 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 34589999876655 3455666777888885 5666777778888888888877788887776543
No 64
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=82.86 E-value=0.97 Score=36.81 Aligned_cols=61 Identities=13% Similarity=0.143 Sum_probs=46.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCC---eEEEEecCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~---~ViIA~AG~a 124 (131)
.+|.|+++..... ..++..+.|+ +++ + .+.. .+++.+.+.+..+.+.+.++ +++||+-|++
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~--~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGs 95 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRH--L-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGT 95 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCC--E-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCe--E-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcH
Confidence 4799999887665 7888888887 554 4 3443 67788888888877766665 8999998876
No 65
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=82.70 E-value=5.9 Score=25.90 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=38.2
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.+-+. +.=+.|+++...|+++||+|+..=+.. .|+...++.+....+++ .+||
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~--~~~~~~~l~~~~g~~~vP~v~i 78 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKAYSNWPTYPQLYV 78 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC--CHHHHHHHHHHHCCCCCCeEEE
Confidence 366666433 666899999999999999987665554 36555555544444455 5554
No 66
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=82.64 E-value=10 Score=28.04 Aligned_cols=64 Identities=11% Similarity=0.114 Sum_probs=46.3
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++...++ ....+.+.+.+++.|. ++.+......+++..++++....++++-||....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 73 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDA 73 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCC
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 34589999976555 3455667777888885 5566667778888888888777788888777543
No 67
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=82.32 E-value=10 Score=28.48 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=46.6
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++-+.++- ...+.+.+.++++|+ ++.+...+..+++..++++.+..++++.||...-
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~ 68 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASI 68 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35799999876652 345556677788885 5666778889998888888877778888886543
No 68
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=82.09 E-value=6.7 Score=30.38 Aligned_cols=62 Identities=16% Similarity=0.207 Sum_probs=43.5
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++...++- ...+.+.+.+++.|.. +.+......++...++++....++++-||...
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 130 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGLA--TIITNSNEDATTMSGSLEFLTSHGVDGIICVP 130 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTCC--EEEEECTTCHHHHHHHHHHHHHTTCSCEEECC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCE--EEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeC
Confidence 35799999766552 4556677778888864 55566677888888888777777887766554
No 69
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=81.66 E-value=14 Score=27.32 Aligned_cols=63 Identities=11% Similarity=0.238 Sum_probs=49.1
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCee-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++.+.++ ....+.+.+.++++|. + +.+...+..++...++++....++++-+|...
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 75 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA 75 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc
Confidence 34689999988776 3455667777888885 6 67788899999998999888888898777654
No 70
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=81.62 E-value=14 Score=28.19 Aligned_cols=61 Identities=11% Similarity=0.155 Sum_probs=46.4
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh--CCCeEEEEec
Q 032873 59 PIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~--~g~~ViIA~A 121 (131)
++|++++-+.++ ....+.+.+.++++|+ ++.+..+...+++..+.++..-. ++++.||...
T Consensus 4 ~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 4 TSVVFLNPGNSTETFWVSYSQFMQAAARDLGL--DLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CEEEEEECSCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHHHHHcCC--eEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 579999988877 3556667777888986 55566788899888888877666 5888877764
No 71
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=81.37 E-value=11 Score=28.32 Aligned_cols=63 Identities=6% Similarity=0.084 Sum_probs=48.4
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++.+.++ ....+.+.+.+++.|. ++.+...+..+++..++++....++++-+|....
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 80 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRR 80 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCC
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecC
Confidence 3579999987776 5667778888899986 5567778888998888998888888987776543
No 72
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=81.34 E-value=5.6 Score=28.31 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=38.8
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~---SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.+-|. ..=+.|+++.+.|+++||+|+..=+.. .|+...++.+....+.+ .|||
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~~~G~~tvP~VfI 96 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPKYANWPTFPQLWV 96 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHHHHCCCCcCEEEE
Confidence 477776653 345799999999999999998766554 46655555544443444 6666
No 73
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=81.06 E-value=3.4 Score=30.36 Aligned_cols=58 Identities=10% Similarity=0.202 Sum_probs=45.9
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
...|++++.+.++ ....+.+.+.++++|. ++.+...+ .++...++++...+++++-+|
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI 65 (280)
T 3gyb_A 5 TQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII 65 (280)
T ss_dssp CCEEEEEESCTTSGGGHHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE
T ss_pred cCEEEEEeCCCCChHHHHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE
Confidence 3589999988776 5667777788888885 67778888 888777788777788899888
No 74
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=80.46 E-value=10 Score=25.00 Aligned_cols=56 Identities=20% Similarity=0.188 Sum_probs=36.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH-hhCCC-eEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGI-KIII 118 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~g~-~ViI 118 (131)
..|.|... +.=+.|+++...|+++||+|+..=+.. .|+...++.+.. ....+ .+||
T Consensus 16 ~~v~vy~~--~~Cp~C~~ak~~L~~~~i~y~~idI~~--~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 16 AKIEIYTW--STCPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEECTT--CHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCEEEEEc--CCChhHHHHHHHHHHCCCCCEEEEcCC--CHHHHHHHHHHhCCCCCCCEEEE
Confidence 35666544 456999999999999999998766654 355555554433 33333 5554
No 75
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=80.46 E-value=9.1 Score=25.96 Aligned_cols=52 Identities=23% Similarity=0.296 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcC
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpG 129 (131)
++++.+.|+..|++++..+..- .| ...+++.+++.+++.||.++-+...+.+
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~G--~~--~~~I~~~a~~~~~dlIV~G~~g~~~~~~ 136 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVVG--IP--HEEIVKIAEDEGVDIIIMGSHGKTNLKE 136 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE--CH--HHHHHHHHHHTTCSEEEEESCCSSCCTT
T ss_pred HHHHHHHHHHcCCceEEEEcCC--CH--HHHHHHHHHHcCCCEEEEcCCCCCCccc
Confidence 3444555566799988877642 23 3445566667789998888765555443
No 76
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=80.35 E-value=6.7 Score=28.43 Aligned_cols=60 Identities=10% Similarity=0.117 Sum_probs=42.2
Q ss_pred eEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEc--CCCChHHHHHHHHHHhhCC-CeEEEEec
Q 032873 60 IVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERG-IKIIIVGD 121 (131)
Q Consensus 60 ~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~S--AHRtp~~~~~~~~~~~~~g-~~ViIA~A 121 (131)
+|++++.+.++ ....+.+.+.++++|.. +.+.. .+..+++..++++....++ ++.||...
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~ 67 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVT--LLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAP 67 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCE--EEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCE--EEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 67888876655 34556677777888864 44444 6678888888887777777 87777665
No 77
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=80.33 E-value=10 Score=25.02 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCCe---eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcC
Q 032873 73 VMNDAARTLSDFGVPY---EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~---ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpG 129 (131)
..+++.+.++..|+++ +..+..- .| ...+++++++.+++.+|.++-+...+.+
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~~ 126 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGG--RP--SRTIVRFARKRECDLVVIGAQGTNGDKS 126 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEECSSCTTCCSC
T ss_pred HHHHHHHHHHhcCCCccceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCccccc
Confidence 4556666777889998 8777643 33 3455666777889999998766555443
No 78
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=80.15 E-value=7.9 Score=29.29 Aligned_cols=64 Identities=11% Similarity=-0.036 Sum_probs=49.9
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCC----CeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI----~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|+|+. +-++ -.+++.+.+.|++.|. +..+.++.++..+++..++++...+++++.||+..
T Consensus 7 ~t~~IGvi~-~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 77 (302)
T 2qh8_A 7 KTAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp CCEEEEEEE-SSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEES
T ss_pred CCcEEEEEE-eccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 345799884 4444 2455677788888887 77888889999999999999888888899888764
No 79
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=80.13 E-value=1.3 Score=33.36 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH-hhCCCeEEEEecCcCCcCcCC
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGVEAHLSGT 130 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~g~~ViIA~AG~aAhLpGv 130 (131)
.+++..+.+++-|| ++.|+|.+|+.++=.++.... ...|..+.-|-.|.|.|-.|.
T Consensus 40 al~~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~ 96 (179)
T 2vo9_A 40 KTRNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCcc
Confidence 33445555556677 589999999999999877433 334556666778889998874
No 80
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=79.78 E-value=17 Score=27.17 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=44.5
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|++++.+.++. ...+.+.+.++++|+ ++.+......+++..++++....++++-||....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 67 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPV 67 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4789998876652 344556778888985 5566667778888888887777777887776543
No 81
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=79.39 E-value=16 Score=26.95 Aligned_cols=62 Identities=8% Similarity=0.023 Sum_probs=44.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|++++-+.++- ...+.+.+.++++|. +++.+...+..++...++++....++++.||...
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~ 67 (309)
T 2fvy_A 3 TRIGVTIYKYDDNFMSVVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINL 67 (309)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cEEEEEeccCCcHHHHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 3688888765552 345566667777874 3677777777888888888777778888777654
No 82
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=79.31 E-value=7.3 Score=25.81 Aligned_cols=52 Identities=10% Similarity=0.067 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCC-CeeEEEEcCCCChHHHHHHHH-HHhhCCCeEEEEecCcCCcCcC
Q 032873 74 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYAL-SAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 74 ~~ka~~~L~~fGI-~~ev~V~SAHRtp~~~~~~~~-~~~~~g~~ViIA~AG~aAhLpG 129 (131)
++++.+.+++.|+ +++..+..- +-...+++ .+++.+++.+|.++-+...+.+
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~ 124 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHR 124 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTT
T ss_pred HHHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcce
Confidence 3445555566789 888877643 23445666 6777889999998876555544
No 83
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=79.30 E-value=16 Score=26.94 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=44.6
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
..|++++-+.++ ....+.+.+.++++|+ ++.+.+. ..+++..++++..-.++++.||....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~ 66 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGF--EVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTP 66 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTE--EEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 468888887766 2445566677788884 5566666 48888888888888888888877654
No 84
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=79.28 E-value=14 Score=26.99 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=46.3
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++.+.+|- ...+.+.+.+++.|. ++.+...+..++...++++....++++-||...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~ 72 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGY--QVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA 72 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 335799999876663 345566677788886 455678888999988999888888898888754
No 85
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=78.85 E-value=11 Score=29.32 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh--CCCeEEEEecCcC
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~--~g~~ViIA~AG~a 124 (131)
|.+.++++.+.|++.|..+....+ =-..++.+.++++...+ ..++++|--||..
T Consensus 40 ~~~~~~~~~~~i~~~g~~~~~~~~-Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 40 LEDRLNQIVQELRGMGKEVLGVKA-DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIM 95 (254)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC-CTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEc-cCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 444455555555555544332222 22345555555544322 3467777777643
No 86
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=78.75 E-value=9.4 Score=26.89 Aligned_cols=58 Identities=10% Similarity=0.001 Sum_probs=37.4
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCC-CeeEEEEcCCCChHHHHHHHHHHhhC-CCeEEEE
Q 032873 60 IVGIIMESDLDL---PVMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 119 (131)
Q Consensus 60 ~V~IimGS~SDl---~~~~ka~~~L~~fGI-~~ev~V~SAHRtp~~~~~~~~~~~~~-g~~ViIA 119 (131)
.|+|+|=|+-+. +.|.+|.++|+++|+ +|+..-+.. .|+....+.+....+ -..|||-
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~--~~~~r~~l~~~sg~~TvPqIFI~ 83 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKDYSNWPTIPQVYLN 83 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS--CHHHHHHHHHHHTCCSSCEEEET
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC--CHHHHHHHHHhccCCCCCeEeEC
Confidence 588888776554 688999999999999 677655443 454443333333222 2377774
No 87
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=78.72 E-value=16 Score=26.36 Aligned_cols=63 Identities=10% Similarity=0.120 Sum_probs=48.3
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
..|++++.+.++ ....+.+.+.+++.|. ++.+...+..+++..++++....++++-+|.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 68 (272)
T 3o74_A 3 RTLGFILPDLENPSYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCL 68 (272)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred eEEEEEeCCCcChhHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 479999988776 3455667777888876 56667788899998899988888889888876543
No 88
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=78.65 E-value=16 Score=27.65 Aligned_cols=63 Identities=10% Similarity=0.082 Sum_probs=45.6
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCC--CeEEEEecC
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG--IKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g--~~ViIA~AG 122 (131)
...|++++.+.++- ...+.+.+.+++.|+. +.+......++...++++....++ ++.||....
T Consensus 5 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~ 72 (332)
T 2rjo_A 5 QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLP--YVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPN 72 (332)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCC--EEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCE--EEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCC
Confidence 35799998776652 4556677788889865 555667778888888887777777 888776543
No 89
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=78.60 E-value=15 Score=29.77 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=49.5
Q ss_pred eEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SD--l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
.|.|--|.-.- ....+-+..+.+++|++.-.++++--|+.+++.+++..+...|++=|.|..|=
T Consensus 55 fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 55 FVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp EEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 45555443322 33444455666789999999999999999999999999999999999998884
No 90
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=78.36 E-value=13 Score=28.70 Aligned_cols=61 Identities=7% Similarity=0.111 Sum_probs=41.2
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeEEEEe
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~ViIA~ 120 (131)
...|++++.+.++ ....+.+.+.+++.|. ++.+...+.. ++...++++....++++-||..
T Consensus 61 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~~vdGiIi~ 125 (349)
T 1jye_A 61 SLLIGVATSSLALHAPSQIVAAILSRADQLGA--SVVVSMVERSGVEACKTAVHNLLAQRVSGLIIN 125 (349)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEE
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHHHHHcCC--EEEEEeCCCCcHHHHHHHHHHHHHCCCCEEEEe
Confidence 3579999976555 2455667778888886 4555555554 6766777777767778766654
No 91
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=78.32 E-value=20 Score=27.16 Aligned_cols=91 Identities=8% Similarity=0.071 Sum_probs=58.4
Q ss_pred HHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEecc-CCC-H--HHHHHHHHHHHHhCCCeeEEEEcCC--CChHH
Q 032873 28 SATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMES-DLD-L--PVMNDAARTLSDFGVPYEIKILPPH--QNCKE 101 (131)
Q Consensus 28 ~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS-~SD-l--~~~~ka~~~L~~fGI~~ev~V~SAH--Rtp~~ 101 (131)
+-+++....++++........ . ...+...|++++.+ .++ + ...+.+.+.+++.|..+.+.+...+ ..+++
T Consensus 17 ~tr~rV~~aa~elgY~pn~~A---r-~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~ 92 (342)
T 1jx6_A 17 EQRNLTNALSEAVRAQPVPLS---K-PTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQ 92 (342)
T ss_dssp HHHHHHHHHHHHHHSCCCCCS---S-CCSSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHhcCCCCccc---c-ccCCceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHH
Confidence 345555666666655310000 0 12234579999876 333 2 5667778888999988777765566 57887
Q ss_pred HHHHHHHHhhCCCeEEEEecCc
Q 032873 102 ALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 102 ~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
..++++....++++.||. .+.
T Consensus 93 ~~~~i~~l~~~~vdgiIi-~~~ 113 (342)
T 1jx6_A 93 QSLSLMEALKSKSDYLIF-TLD 113 (342)
T ss_dssp HHHHHHHHHHTTCSEEEE-CCS
T ss_pred HHHHHHHHHhcCCCEEEE-eCC
Confidence 778888777788988887 443
No 92
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=78.31 E-value=17 Score=26.48 Aligned_cols=63 Identities=11% Similarity=0.124 Sum_probs=45.5
Q ss_pred CCeEEEEecc--CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMES--DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS--~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++.. .++ ....+.+.+.+++.|+ ++.+......+++..++++....++++.+|....
T Consensus 19 ~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 86 (296)
T 3brq_A 19 TQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 86 (296)
T ss_dssp CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CceEEEEeCCcccCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecC
Confidence 3579999876 333 2456667777888886 5667777788888888888777788887776544
No 93
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=78.28 E-value=14 Score=28.39 Aligned_cols=61 Identities=10% Similarity=0.059 Sum_probs=45.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh--------------CCCeEEEEecCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--------------RGIKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~--------------~g~~ViIA~AG~a 124 (131)
.+.++|.|. . ...+.++..|.+.| +++.|+ .|++++..++++.... .+++++|..+|..
T Consensus 119 ~k~vlViGa-G--g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 119 GLRILLIGA-G--GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp TCEEEEECC-S--HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCC
Confidence 357778887 3 68889999999999 566665 6999999888755321 3689999999865
Q ss_pred Cc
Q 032873 125 AH 126 (131)
Q Consensus 125 Ah 126 (131)
.+
T Consensus 192 ~~ 193 (271)
T 1nyt_A 192 IS 193 (271)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 94
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=78.02 E-value=9 Score=27.16 Aligned_cols=60 Identities=13% Similarity=-0.063 Sum_probs=48.1
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee---------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~e---------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.++.|.-+-...++.....|..+|+++. +-++|......++.+.++.++++|++++ ++.+
T Consensus 40 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~ 114 (186)
T 1m3s_A 40 IFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVA-ALTI 114 (186)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEE-EEES
T ss_pred EEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 3566776669999999999999998754 5678888888999999999999999864 4433
No 95
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=77.97 E-value=6.9 Score=33.62 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=47.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--cCCC-ChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQ-NCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~--SAHR-tp~~~~~~~~~~~~~g~~Vi 117 (131)
.+.-|..+.||+..++.+.+.+++.|..++..++ ...| +|+.+.++++.+.+-|++.|
T Consensus 115 d~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 175 (464)
T 2nx9_A 115 DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSI 175 (464)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEE
Confidence 4555678999999999999999999998877772 2333 78999999999999999754
No 96
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=77.92 E-value=19 Score=26.72 Aligned_cols=63 Identities=13% Similarity=0.138 Sum_probs=45.4
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
....|++++-..+| ....+.+.+.+++.|. ++.+......++...++++....++++-+|...
T Consensus 15 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 80 (289)
T 2fep_A 15 KTTTVGVIIPDISSIFYSELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMG 80 (289)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 34589999976555 2455666777888885 556667777888888888887788888777654
No 97
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=77.92 E-value=13 Score=27.28 Aligned_cols=64 Identities=14% Similarity=0.041 Sum_probs=47.7
Q ss_pred CCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS-----~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++.+ .++ ....+.+.+.++++|. ++.+...+..++...++++....++++-||....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 78 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYS 78 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCC
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 44589999987 444 2456667778888985 6667778878888888888888888988876543
No 98
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=77.61 E-value=1.6 Score=36.04 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=43.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+|.|++|... ....++..+ .|+--+.+.-...+.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 39 rvliVtd~~~-~~~~~~v~~---~L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 100 (364)
T 3iv7_A 39 KVMVIAGERE-MSIAHKVAS---EIEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGST 100 (364)
T ss_dssp SEEEECCGGG-HHHHHHHTT---TSCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred EEEEEECCCH-HHHHHHHHH---HcCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHH
Confidence 6889988764 344444443 3442223333446888899999998888899999999999874
No 99
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=76.96 E-value=12 Score=29.66 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=42.7
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.++.||.=..|- ....+++...|++.|+++++.... .+....++++.+...+++++|++-|
T Consensus 25 ~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~---~~~~a~~~~~~~~~~~~d~vvv~GG 89 (337)
T 2qv7_A 25 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE---KIGDATLEAERAMHENYDVLIAAGG 89 (337)
T ss_dssp EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC---STTHHHHHHHHHTTTTCSEEEEEEC
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec---CcchHHHHHHHHhhcCCCEEEEEcC
Confidence 357787654443 467788999999999887776542 3445667777666677888887655
No 100
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=76.73 E-value=2.3 Score=34.05 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=57.0
Q ss_pred cceeeec-CChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEecc--CCCHHHHHHHHHHHHHhCC-------
Q 032873 17 GTIPVLA-SSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMES--DLDLPVMNDAARTLSDFGV------- 86 (131)
Q Consensus 17 ghitVt~-~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS--~SDl~~~~ka~~~L~~fGI------- 86 (131)
|--+++. -+-++++++++|.++++... .=|-=-||| ++|...|+...+.|++-|.
T Consensus 99 gp~~L~~~~s~~ei~~~l~~al~~vP~a---------------~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~FlDS~T 163 (261)
T 2qv5_A 99 GPDTLLAGDPAKVNIDRLHRSMAKITNY---------------TGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGS 163 (261)
T ss_dssp CTTCBCTTSCHHHHHHHHHHHHTTCCCC---------------SEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CcCcCcCCCCHHHHHHHHHHHHHHCCCc---------------EEEecccccchhcCHHHHHHHHHHHHHCCCEEEcCCC
Confidence 4444444 45779999999998665543 123445999 9999999999988887765
Q ss_pred ---------------CeeE--EEEcCCCChHHHHH----HHHHHhhCCCeEEEEe
Q 032873 87 ---------------PYEI--KILPPHQNCKEALS----YALSAKERGIKIIIVG 120 (131)
Q Consensus 87 ---------------~~ev--~V~SAHRtp~~~~~----~~~~~~~~g~~ViIA~ 120 (131)
|+-. ..+=..++++.+.+ .+..|+.+|.-|.|+=
T Consensus 164 s~~S~a~~~A~~~gvp~~~rdvFLD~~~~~~~I~~qL~~a~~~Ar~~G~AIaIGh 218 (261)
T 2qv5_A 164 SAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVAS 218 (261)
T ss_dssp CTTCCHHHHHHHHTCCEEECSEETTSSCSHHHHHHHHHHHHHHHHHHSEEEEEEE
T ss_pred CcccHHHHHHHHcCCCeEEeeeecCCCCCHHHHHHHHHHHHHHHHhcCcEEEEeC
Confidence 3222 12223455555444 3355667787777764
No 101
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=76.57 E-value=20 Score=26.22 Aligned_cols=63 Identities=10% Similarity=0.097 Sum_probs=45.0
Q ss_pred CeEEEEeccCC--CH---HHHHHHHHHHHHhCCCeeEEEEcC--CCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 59 PIVGIIMESDL--DL---PVMNDAARTLSDFGVPYEIKILPP--HQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~IimGS~S--Dl---~~~~ka~~~L~~fGI~~ev~V~SA--HRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
..|++++-+.+ |- ...+.+.+.+++.|. ++.+... ...+++..++++....++++.||.....
T Consensus 6 ~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~ 75 (289)
T 3brs_A 6 YYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAAD 75 (289)
T ss_dssp CEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSC
T ss_pred cEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 57999987655 42 344566677888885 5566555 6788888888888777889888876543
No 102
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=76.49 E-value=8.9 Score=25.59 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=40.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHH-HHHhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA-LSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~-~~~~~~g~-~ViI 118 (131)
.|.|.+- +-=|.|.++...|+++|++|+..=+.-+..+..+.+.+ +....+.+ .|||
T Consensus 18 ~v~vy~~--~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi 76 (114)
T 3h8q_A 18 RVVIFSK--SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV 76 (114)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEc--CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE
Confidence 4666655 56799999999999999999888777776666665655 33333333 6666
No 103
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=75.96 E-value=2.1 Score=33.01 Aligned_cols=55 Identities=11% Similarity=0.169 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHh-hCCCeEEEEecCcCCcCcCC
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIVGDGVEAHLSGT 130 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~-~~g~~ViIA~AG~aAhLpGv 130 (131)
+++..+.+++-||. +.|+|..|++++=.++..... ..|..|.-|-.|.|.|..|.
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~ 96 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCcccee
Confidence 55556666778886 899999999999888775432 23444444556899998774
No 104
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=75.71 E-value=14 Score=25.24 Aligned_cols=51 Identities=16% Similarity=0.049 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhCCCeeE--EEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 74 MNDAARTLSDFGVPYEI--KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev--~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
++++.+.|+..|++++. .+..- . -...+++.+++.+++.||.++-+...+.
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g--~--~~~~I~~~a~~~~~DlIV~G~~g~~~~~ 132 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFG--I--PWDEIVKVAEEENVSLIILPSRGKLSLS 132 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEE--C--HHHHHHHHHHHTTCSEEEEESCCCCC--
T ss_pred HHHHHHHHHHcCCceeeeeEEecC--C--hHHHHHHHHHHcCCCEEEECCCCCCccc
Confidence 44455556667999887 66532 2 3345566667778999888876555443
No 105
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=75.68 E-value=7 Score=32.01 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=45.6
Q ss_pred CeEEEEeccCC-CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC
Q 032873 59 PIVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 112 (131)
Q Consensus 59 ~~V~IimGS~S-Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~ 112 (131)
.+..|+.|.+. +.-+++.-.+.|+++||.++.....+.-+.+++.+.++...++
T Consensus 39 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 93 (300)
T 4a26_A 39 GLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNND 93 (300)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 58889999763 3567778888999999999999999999999999999777543
No 106
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=75.53 E-value=2.5 Score=33.58 Aligned_cols=85 Identities=20% Similarity=0.103 Sum_probs=57.0
Q ss_pred cCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEecc--CCCHHHHHHHHHHHHHhCC--------------
Q 032873 23 ASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMES--DLDLPVMNDAARTLSDFGV-------------- 86 (131)
Q Consensus 23 ~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS--~SDl~~~~ka~~~L~~fGI-------------- 86 (131)
+-+-++++++++|.++.+... .=|-=-||| ++|.+.|+...+.|++.|.
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a---------------~GvnNHmGS~~T~~~~~m~~vm~~l~~~gL~fvDS~Ts~~S~a~ 143 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYA---------------VGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIP 143 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTC---------------CEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHH
T ss_pred CCCHHHHHHHHHHHHHHCCCc---------------EEEecccccchhcCHHHHHHHHHHHHHCCCEEEcCCCCcccHHH
Confidence 445679999999998777653 123345999 8999999999988887765
Q ss_pred --------CeeE---EEEcCCCChHHHHHHH----HHHhhCCCeEEEEecC
Q 032873 87 --------PYEI---KILPPHQNCKEALSYA----LSAKERGIKIIIVGDG 122 (131)
Q Consensus 87 --------~~ev---~V~SAHRtp~~~~~~~----~~~~~~g~~ViIA~AG 122 (131)
|+-. .+=.+.++++.+.+.. ..|+.+|.-|.|+=..
T Consensus 144 ~~A~~~gvp~~~rdvFLD~~~~~~~~I~~ql~~a~~~A~~~G~aIaIGhp~ 194 (245)
T 2nly_A 144 QLAEELEVPYATRSIFLDNTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVG 194 (245)
T ss_dssp HHHHHTTCCEEECCEESCCTTCCHHHHHHHHHHHHHHHHTTSCCEEEEECS
T ss_pred HHHHHcCCCeEEeeEECCCCCCCHHHHHHHHHHHHHHHhhcCcEEEEECCC
Confidence 3221 2111256666554433 4667788888887544
No 107
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=75.46 E-value=16 Score=25.70 Aligned_cols=60 Identities=17% Similarity=0.024 Sum_probs=48.5
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee---------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~e---------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.++.|.-+-...++.....|..+|.++. +-++|.-....++.+.++.++++|++++ ++.+
T Consensus 43 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~ 117 (180)
T 1jeo_A 43 IFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII-AIVC 117 (180)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE-EEES
T ss_pred EEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE-EEeC
Confidence 4667888888899999999999998644 5678888888999999999999999765 4433
No 108
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=75.01 E-value=13 Score=23.31 Aligned_cols=60 Identities=15% Similarity=0.125 Sum_probs=48.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCe---------eEEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPY---------EIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~---------ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
..-.|-+|+-+|.+-++....-|...|++. .|+|- ...+.++..++.......|++.||.
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vG-pf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIG-AFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEE-EESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEEC-CcCCHHHHHHHHHHHHHcCCceEEE
Confidence 468899999999999999999999989873 34443 5677788888888777778877774
No 109
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=74.84 E-value=3.1 Score=32.27 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=27.6
Q ss_pred CCCeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEc
Q 032873 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDFGVPYEIKILP 94 (131)
Q Consensus 57 ~~~~V~IimGS~SD-----l~~~~ka~~~L~~fGI~~ev~V~S 94 (131)
+..+|+||+|+.|+ +...+.+.+.|++.|.. +..+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~--v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGID--AHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCE--EEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCE--EEEEe
Confidence 44689999999998 44678888999999864 44444
No 110
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=74.84 E-value=20 Score=29.15 Aligned_cols=64 Identities=14% Similarity=0.037 Sum_probs=48.0
Q ss_pred CeEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC---------C-hHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ---------N-CKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~S----Dl~~~~ka~~~L~~fGI~~ev~V~SAHR---------t-p~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
-+|+||.=|.. |....+.+.+.|+++|..+.+ +.|- + -+|..++.+...+..++.|+++-|+-
T Consensus 14 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~---~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 90 (336)
T 3sr3_A 14 DTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE---GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGM 90 (336)
T ss_dssp CEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE---CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE---cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 47999987653 567899999999999986544 3332 1 24667777777788899999999985
Q ss_pred C
Q 032873 125 A 125 (131)
Q Consensus 125 A 125 (131)
.
T Consensus 91 g 91 (336)
T 3sr3_A 91 N 91 (336)
T ss_dssp C
T ss_pred c
Confidence 4
No 111
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=74.52 E-value=23 Score=26.12 Aligned_cols=63 Identities=8% Similarity=0.036 Sum_probs=44.9
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH---HHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS---YALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~---~~~~~~~~g~~ViIA~AG 122 (131)
...|++++-..+| ....+.+.+.+++.|. ++.+......++...+ +++....++++-+|....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 76 (290)
T 2rgy_A 8 LGIIGLFVPTFFGSYYGTILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISH 76 (290)
T ss_dssp CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecC
Confidence 3579999876555 3455666777888885 5666777777777777 777777788888776543
No 112
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=74.52 E-value=14 Score=27.57 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=47.5
Q ss_pred CCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS-----~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
....|++++.+ .++ ....+.+.+.+++.|. .+.+...+..++...++++....++++-+|...
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 91 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLY 91 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 34589999987 455 3456677788888985 666777888888888888888888898777654
No 113
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=74.47 E-value=11 Score=23.49 Aligned_cols=53 Identities=15% Similarity=0.043 Sum_probs=34.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH-hhCCCeEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGIKII 117 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~g~~Vi 117 (131)
+.|.+... +.=+.|+++...|++.|++|+..=+. ++...++.+.. ..+++-++
T Consensus 6 ~~v~~y~~--~~C~~C~~~~~~L~~~~i~~~~vdv~----~~~~~~l~~~~~~~~~vP~l 59 (89)
T 2klx_A 6 KEIILYTR--PNCPYCKRARDLLDKKGVKYTDIDAS----TSLRQEMVQRANGRNTFPQI 59 (89)
T ss_dssp CCEEEESC--SCCTTTHHHHHHHHHHTCCEEEECSC----HHHHHHHHHHHHSSCCSCEE
T ss_pred ceEEEEEC--CCChhHHHHHHHHHHcCCCcEEEECC----HHHHHHHHHHhCCCCCcCEE
Confidence 35655543 34489999999999999998755443 66666666544 44445333
No 114
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=73.74 E-value=21 Score=25.89 Aligned_cols=61 Identities=8% Similarity=0.042 Sum_probs=42.2
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|++++...+| ....+.+.+.+++.|. ++.+......++...++++....++++-+|...
T Consensus 4 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~ 67 (275)
T 3d8u_A 4 YSIALIIPSLFEKACAHFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFG 67 (275)
T ss_dssp CEEEEEESCSSCHHHHHHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEES
T ss_pred eEEEEEeCCCccccHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 478898876555 2445566777788886 444556667788877888777777787666543
No 115
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=73.74 E-value=21 Score=25.17 Aligned_cols=57 Identities=14% Similarity=0.189 Sum_probs=44.2
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCee---------------------EEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 61 VGIIMESDLDLPVMNDAARTLSDFGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 61 V~IimGS~SDl~~~~ka~~~L~~fGI~~e---------------------v~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
-.++.|.-+-...++.....|..+|+++. +-++|.-....++.+.++.++++|++++
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 45777877788899999999999998753 4556666677788888888888888765
No 116
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=73.69 E-value=1.8 Score=34.75 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=23.1
Q ss_pred EEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 91 KILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 91 ~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
+|-|-.=|++++.++++++.++|++||+
T Consensus 68 ~i~~~~Gt~~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 68 KLCTRSGNEDEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3444444789999999999999999997
No 117
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=72.60 E-value=31 Score=26.61 Aligned_cols=60 Identities=12% Similarity=0.164 Sum_probs=40.4
Q ss_pred CeEEEEe--ccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIM--ESDLDL----PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~Iim--GS~SDl----~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|++|. |.-+|. .+.+-+.+.++++|+ ++.++...-. .+..++++...+++++.||...
T Consensus 5 ~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~--~~~~~~~~~~-~~~~~~l~~l~~~~~dgIi~~~ 70 (318)
T 2fqx_A 5 FVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA--KCKYVTASTD-AEYVPSLSAFADENMGLVVACG 70 (318)
T ss_dssp CEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTC--EEEEEECCSG-GGHHHHHHHHHHTTCSEEEEES
T ss_pred cEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCC--eEEEEeCCCH-HHHHHHHHHHHHcCCCEEEECC
Confidence 4788887 466773 344566667788985 5555555433 3445677777788899888764
No 118
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=72.37 E-value=9.7 Score=26.32 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
++++.+.++..|++++..+..- .| ...+++.+++.+++.||.++-+...+.
T Consensus 89 l~~~~~~~~~~g~~~~~~v~~G--~~--~~~I~~~a~~~~~DLIVmG~~g~~~~~ 139 (175)
T 2gm3_A 89 LEFFVNKCHEIGVGCEAWIKTG--DP--KDVICQEVKRVRPDFLVVGSRGLGRFQ 139 (175)
T ss_dssp HHHHHHHHHHHTCEEEEEEEES--CH--HHHHHHHHHHHCCSEEEEEECCCC---
T ss_pred HHHHHHHHHHCCCceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCChhh
Confidence 4445555667899988877642 23 445566666777888888875554443
No 119
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=72.36 E-value=25 Score=25.57 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=49.3
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
..|++++.+.+|. ...+.+.+.+++.|. ++.+.+.+..+++..++++....++++-+|....
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 80 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPT 80 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecc
Confidence 5899999887763 566677788888886 6667788889999889998888888988887654
No 120
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=72.18 E-value=26 Score=25.59 Aligned_cols=61 Identities=16% Similarity=0.366 Sum_probs=43.1
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|++++.+.++. ..++.+.+.+++.| |++.+......+++-.++++....++++-+|...
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINP 65 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcC--cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 3688888766553 45566677788888 5666667777777777777777777787777654
No 121
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=72.16 E-value=25 Score=26.46 Aligned_cols=27 Identities=11% Similarity=0.204 Sum_probs=16.4
Q ss_pred ChHHHHHHHHHHhh--CCCeEEEEecCcC
Q 032873 98 NCKEALSYALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 98 tp~~~~~~~~~~~~--~g~~ViIA~AG~a 124 (131)
.++.+.++++...+ .+++++|..||..
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34555555543322 3589999998865
No 122
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=72.13 E-value=18 Score=29.18 Aligned_cols=66 Identities=15% Similarity=0.094 Sum_probs=47.5
Q ss_pred CeEEEEeccC----CCHHHHHHHHHHHHHhCCCeeEEEEcCCC-------Ch-HHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESD----LDLPVMNDAARTLSDFGVPYEIKILPPHQ-------NC-KEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~----SDl~~~~ka~~~L~~fGI~~ev~V~SAHR-------tp-~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
-+|+||.=|. .+-+..+.+.+.|+++|..+.+.=. +.+ ++ +|..++.+...+..++.|+++-|+-.
T Consensus 13 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (327)
T 4h1h_A 13 DEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEH-VAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFN 90 (327)
T ss_dssp CEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred CEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcc-hhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchh
Confidence 4899997653 3667899999999999975433210 112 22 46777877778888999999999854
No 123
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=72.10 E-value=25 Score=25.80 Aligned_cols=62 Identities=10% Similarity=0.173 Sum_probs=44.4
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++.. ++. ...+.+.+.+++.|+ ++.+......+++..++++....++++.+|....
T Consensus 8 ~~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 72 (288)
T 2qu7_A 8 SNIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPV 72 (288)
T ss_dssp EEEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCS
T ss_pred CCEEEEEECC-CCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecC
Confidence 3579999987 542 345566667778886 5556667778888888888777788887776654
No 124
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=72.07 E-value=14 Score=27.26 Aligned_cols=62 Identities=6% Similarity=0.083 Sum_probs=42.9
Q ss_pred CeEEEEecc-C---CC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMES-D---LD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS-~---SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
..|++++-. . ++ ....+.+.+.+++.|. ++.+......++...++++....++++-+|....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (287)
T 3bbl_A 5 FMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSI 73 (287)
T ss_dssp CEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSC
T ss_pred eEEEEEecccccccCChhHHHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeec
Confidence 478888765 3 33 4566777788888885 5666666666766667777777778887776543
No 125
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=72.00 E-value=30 Score=26.29 Aligned_cols=62 Identities=10% Similarity=0.149 Sum_probs=45.6
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|++++...++. ...+.+.+.+++.|. ++.+...+..+++..++++....++++-||...
T Consensus 58 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 122 (340)
T 1qpz_A 58 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMC 122 (340)
T ss_dssp CSEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeC
Confidence 35899999765552 355666777888885 566677778888888888877778888777654
No 126
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=71.77 E-value=28 Score=25.79 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=45.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCC--CChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAH--Rtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|++++.+.++- ...+.+.+.++++|+ ++.+.... ..+++..++++....++++.||....
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 70 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIP 70 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4788998876552 344556677788885 56666665 68998889998888888988876544
No 127
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=71.27 E-value=28 Score=25.57 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=42.8
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEE-cCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~-SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|+++....++ ....+.+.+.++++| |++.+. .....+++..++++....++++.||....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~ 70 (303)
T 3d02_A 5 KTVVNISKVDGMPWFNRMGEGVVQAGKEFN--LNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPN 70 (303)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHHHHHTT--EEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEEeccCCChHHHHHHHHHHHHHHHcC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 478888865544 234556667778887 456544 36778888888887777788888776543
No 128
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=71.17 E-value=15 Score=28.87 Aligned_cols=57 Identities=9% Similarity=-0.019 Sum_probs=44.0
Q ss_pred eEEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcC------CC-ChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl--------------~~~~ka~~~L~~fGI~~ev~V~SA------HR-tp~~~~~~~~~~~~~g~~Vi 117 (131)
.|. |.+|.||. +.+.++.+.+++.|+++++.+.-+ .| +|+.+.++++.+.+-|++.|
T Consensus 96 ~v~-i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 96 EVV-IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp EEE-EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEE-EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 344 46688887 567778888999999988877633 23 58999999999888888754
No 129
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=70.53 E-value=33 Score=26.09 Aligned_cols=66 Identities=9% Similarity=0.036 Sum_probs=46.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--cCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~--SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
+.+|++|.|..... -.+--.+.|++.|.+ ++.+. +..-.|+.-.+.++..-++|+++|+|.++..|
T Consensus 126 ~~~Ig~i~g~~~~~-r~~Gf~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~D~~a 193 (296)
T 2hqb_A 126 THKVGVIAAFPWQP-EVEGFVDGAKYMNES-EAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH 193 (296)
T ss_dssp SSEEEEEESCTTCH-HHHHHHHHHHHTTCC-EEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH
T ss_pred CCeEEEEcCcCchh-hHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 36899999976654 555556788889987 65543 23346776666665554568999999988753
No 130
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=70.51 E-value=32 Score=27.83 Aligned_cols=67 Identities=15% Similarity=0.093 Sum_probs=48.3
Q ss_pred CeEEEEeccCC-CHHHHHHHHHHHHHhCCCeeEEEEcCCC-------C-hHHHHHHHHHHhhCCCeEEEEecCcCCc
Q 032873 59 PIVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAH 126 (131)
Q Consensus 59 ~~V~IimGS~S-Dl~~~~ka~~~L~~fGI~~ev~V~SAHR-------t-p~~~~~~~~~~~~~g~~ViIA~AG~aAh 126 (131)
-.|+||.=|.. |.+..+.+.+.|+++|..+.+. -.+.+ + -++..++.+...+..++.|+++=|+-..
T Consensus 18 d~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 18 GRVALIAPASAIATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp SEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 47999987653 6777899999999999866543 11222 2 3456666677778889999999998553
No 131
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=70.40 E-value=15 Score=32.29 Aligned_cols=58 Identities=16% Similarity=0.009 Sum_probs=46.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--CCC-ChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S--AHR-tp~~~~~~~~~~~~~g~~Vi 117 (131)
.+.-|..+.||+.-++.+.+.+++.|..++..++- ..| +|+.+.++++.+.+-|++.|
T Consensus 132 d~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 192 (539)
T 1rqb_A 132 DVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSI 192 (539)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 45556789999999999999999999988766632 222 68999999998888898754
No 132
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=70.05 E-value=29 Score=26.22 Aligned_cols=62 Identities=15% Similarity=0.214 Sum_probs=42.5
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHh-CCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~f-GI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
...|++++.. +|- ...+.+.+.+++. |+ ++.+......++...++++....++++.||....
T Consensus 6 ~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 6 HFRIGVAQCS-DDSWRHKMNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3579999877 442 2344455566666 64 6667777788888888887777788887776543
No 133
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=69.36 E-value=17 Score=22.45 Aligned_cols=56 Identities=14% Similarity=0.041 Sum_probs=36.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViI 118 (131)
..|.+...+ .=+.|+++...|++.|++|+..=+. ..++...++.+....+++ .+|+
T Consensus 6 ~~v~ly~~~--~C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 6 VDVIIYTRP--GCPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp CCEEEEECT--TCHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHHHHTSSCCCEEEE
T ss_pred ccEEEEECC--CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHhCCCCcCEEEE
Confidence 356665443 3489999999999999998865544 456666666654444444 4443
No 134
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=69.31 E-value=17 Score=26.86 Aligned_cols=63 Identities=10% Similarity=0.207 Sum_probs=42.3
Q ss_pred CCCeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD-----l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++.+.+| ....+.+.+.++++| |++.+......++...++.+....++++-||...
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 74 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQ--YHLVVTPHIHAKDSMVPIRYILETGSADGVIISK 74 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSS--CEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEES
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcC--CEEEEecCCcchhHHHHHHHHHHcCCccEEEEec
Confidence 34589999987665 244555666677777 4666677766676666666666667787777653
No 135
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=69.14 E-value=0.95 Score=37.04 Aligned_cols=28 Identities=21% Similarity=0.128 Sum_probs=25.5
Q ss_pred ecceeeecCChHHHhhcccccccccCCC
Q 032873 16 RGTIPVLASSNGSATSRRKDDSSVREPS 43 (131)
Q Consensus 16 rghitVt~~~l~~vk~~~~~v~~~~~~~ 43 (131)
+||+|++++|.++++++...+.+.++.+
T Consensus 374 mGhv~~~~~~~~~~~~~a~~~~~~~~~~ 401 (403)
T 3k5i_A 374 MGHITVTAPTMHEAETHIQPLIDVVDRI 401 (403)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEEEcCCHHHHHHHHHHHHhhhhhc
Confidence 6999999999999999999998887765
No 136
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=68.95 E-value=12 Score=23.20 Aligned_cols=57 Identities=14% Similarity=0.083 Sum_probs=35.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC---hHHHHHHHHHHhhCCCeEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN---CKEALSYALSAKERGIKIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt---p~~~~~~~~~~~~~g~~ViI 118 (131)
.|.+...+ .=+.|+++...|+++|++|+..-+..... ++...++.+.....++=+++
T Consensus 13 ~v~ly~~~--~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~ 72 (92)
T 3ic4_A 13 EVLMYGLS--TCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVV 72 (92)
T ss_dssp SSEEEECT--TCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEE
T ss_pred eEEEEECC--CChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEE
Confidence 46565443 44899999999999999998765543221 11235555444444454443
No 137
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=68.75 E-value=33 Score=25.36 Aligned_cols=61 Identities=10% Similarity=0.135 Sum_probs=43.1
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEc--CCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 60 IVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 60 ~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~S--AHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.|++++-+.++. ...+.+.+.+++.|+ ++.+.+ .+..+++..++++....++++-+|....
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 68 (288)
T 1gud_A 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV--SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 68 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTC--CEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 588888665553 345566777888884 556666 6778888888887777777887776544
No 138
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=68.70 E-value=19 Score=26.61 Aligned_cols=63 Identities=14% Similarity=0.182 Sum_probs=35.9
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEE-cCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~-SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++...+| ....+.+.+.+++.|. ++.+. .....+++..++++....++++-+|...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 73 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLS 73 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEES
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEec
Confidence 33579999865444 3455666777888885 56666 6666777766777777777888777654
No 139
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=68.53 E-value=1.5 Score=35.48 Aligned_cols=65 Identities=14% Similarity=0.021 Sum_probs=45.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHHHHHhhCCC---eEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~~~~~~~g~---~ViIA~AG~aA 125 (131)
.+|.|++++.......++..+.|++-+ +++.+.. ++++.+.+.+..+.+.+.|+ +++||+-|++.
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~--~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv 97 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALE--VRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVI 97 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSC--EEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCC--cEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChHH
Confidence 368899876543334555555554443 4444543 57788999999988888889 99999999763
No 140
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=68.47 E-value=23 Score=24.51 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCCC-eeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCc
Q 032873 72 PVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 126 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~-~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAh 126 (131)
..++++.+.++..|++ ++..+..- .| ...+++.+++.+++.||.++-+...
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G--~~--~~~I~~~a~~~~~DLIV~G~~g~~~ 132 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVG--AP--VDALVNLADEEKADLLVVGNVGLST 132 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECS--SH--HHHHHHHHHHTTCSEEEEECCCCCS
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecC--CH--HHHHHHHHHhcCCCEEEECCCCCCc
Confidence 4456677777888998 88877642 33 4456677777889888888754443
No 141
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=68.18 E-value=27 Score=25.81 Aligned_cols=62 Identities=5% Similarity=0.045 Sum_probs=41.9
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++ +.++- ...+.+.+.+++.|. ++.+...+..++ ..++++....++++-+|....
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~ 75 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGT 75 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETC
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECC
Confidence 345899999 66552 345667777888885 566666666666 566777777778888777653
No 142
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=68.13 E-value=23 Score=26.36 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=45.0
Q ss_pred CCCeEEEEec-----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIME-----SDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimG-----S~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+...|++++. ..+| ....+.+.+.+++.|. .+.+...+..++...++++....++++-+|...
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 76 (295)
T 3hcw_A 6 QTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLY 76 (295)
T ss_dssp CSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESC
T ss_pred CCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcC
Confidence 3458999983 2333 3556677778888875 666777777778778888888788888777654
No 143
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=68.07 E-value=20 Score=28.29 Aligned_cols=47 Identities=9% Similarity=-0.090 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC------CC-ChHHHHHHHHHHhhCCCeEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA------HR-tp~~~~~~~~~~~~~g~~ViI 118 (131)
+.++++.+.+++.|+.++..+..+ .| .|+.+.++++.+.+-|++.|-
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 177 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVS 177 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 667888899999999988776654 23 589999999988888887543
No 144
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=67.98 E-value=22 Score=23.17 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
++++.+.+++.|++++..+..- .| ...+++.++ +++.+|.++-+...+.
T Consensus 68 l~~~~~~~~~~g~~~~~~v~~g--~~--~~~I~~~a~--~~dliV~G~~~~~~~~ 116 (138)
T 3idf_A 68 TQKFSTFFTEKGINPFVVIKEG--EP--VEMVLEEAK--DYNLLIIGSSENSFLN 116 (138)
T ss_dssp HHHHHHHHHTTTCCCEEEEEES--CH--HHHHHHHHT--TCSEEEEECCTTSTTS
T ss_pred HHHHHHHHHHCCCCeEEEEecC--Ch--HHHHHHHHh--cCCEEEEeCCCcchHH
Confidence 4455566667899999888754 23 334455554 7888888876555444
No 145
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=67.84 E-value=33 Score=25.04 Aligned_cols=66 Identities=5% Similarity=0.022 Sum_probs=48.3
Q ss_pred CCCeEEEEeccC-CC---HHHHHHHHHHHHHh-CCCeeEEEE-cCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESD-LD---LPVMNDAARTLSDF-GVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~-SD---l~~~~ka~~~L~~f-GI~~ev~V~-SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++.+. ++ ....+.+.+.+++. |..+.+... ..+-.+++..++++....++++-||....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 345799988775 33 34455667777888 877777665 46778888888888888888988887654
No 146
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=67.14 E-value=31 Score=24.79 Aligned_cols=66 Identities=15% Similarity=0.055 Sum_probs=41.1
Q ss_pred CCCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCee-EEEEcCCCChHHHHHHHHHH-hhCCCeEEEEecC
Q 032873 57 DAPIVGIIMESDL------------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSA-KERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimGS~S------------Dl~~~~ka~~~L~~fGI~~e-v~V~SAHRtp~~~~~~~~~~-~~~g~~ViIA~AG 122 (131)
++.+|+||+=|++ |-. ..-+++.|+++|+... ..++ ==.++.+.+-+..+ +...++++|...|
T Consensus 14 ~~~~v~iitvsd~~~~~~~~~g~i~D~n-g~~L~~~L~~~G~~v~~~~iV--~Dd~~~i~~al~~~~a~~~~DlVittGG 90 (178)
T 3iwt_A 14 KSLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGG 90 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESC
T ss_pred CCCEEEEEEEcCCCccccccCCCCCcch-HHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEecCC
Confidence 4468999987763 321 2336778899998754 3333 23445555544433 3456899998888
Q ss_pred cCC
Q 032873 123 VEA 125 (131)
Q Consensus 123 ~aA 125 (131)
.+-
T Consensus 91 ~g~ 93 (178)
T 3iwt_A 91 TGY 93 (178)
T ss_dssp CSS
T ss_pred ccc
Confidence 764
No 147
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=67.11 E-value=18 Score=30.06 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=48.0
Q ss_pred CeEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC-------C-hHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~S----Dl~~~~ka~~~L~~fGI~~ev~V~SAHR-------t-p~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
-+|+||.=|.. |....+.+.+.|+++|..+.+.=. +.+ + -+|..++.+...+..++.|+|+-|+-.
T Consensus 44 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyg 121 (371)
T 3tla_A 44 DTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKL-TGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDN 121 (371)
T ss_dssp CEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTT-TTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSC
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 47999987643 668899999999999986543211 111 1 256777777777888999999999854
No 148
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=67.00 E-value=13 Score=27.34 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=27.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH 96 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAH 96 (131)
.|.+.+- +.=+.|+++...|++.||+|+..-+..+
T Consensus 171 ~i~ly~~--~~Cp~C~~a~~~L~~~~i~~~~~~i~~~ 205 (241)
T 1nm3_A 171 SISIFTK--PGCPFCAKAKQLLHDKGLSFEEIILGHD 205 (241)
T ss_dssp CEEEEEC--SSCHHHHHHHHHHHHHTCCCEEEETTTT
T ss_pred eEEEEEC--CCChHHHHHHHHHHHcCCceEEEECCCc
Confidence 4555543 4569999999999999999998777655
No 149
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=66.86 E-value=7 Score=31.68 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=44.2
Q ss_pred EEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEc---CCCC-hHHHHHHHHHHhhCCCeEE
Q 032873 61 VGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILP---PHQN-CKEALSYALSAKERGIKII 117 (131)
Q Consensus 61 V~IimGS~SDl--------------~~~~ka~~~L~~fGI~~ev~V~S---AHRt-p~~~~~~~~~~~~~g~~Vi 117 (131)
+.-+..|.||. +.+.++.+.+++.|+.+.+.+.. +.|. |+.+.++++.+.+-|++.|
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 186 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERI 186 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEE
Confidence 44567778886 67788888889999987777665 5454 7888999998888898754
No 150
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=66.77 E-value=14 Score=26.61 Aligned_cols=57 Identities=12% Similarity=0.126 Sum_probs=44.8
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee--------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~e--------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
.++.|.-+-...++.....|.++|+++. +-++|.-....++.+.++.++++|++|+.
T Consensus 48 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~ 124 (201)
T 3fxa_A 48 IVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIG 124 (201)
T ss_dssp EEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEE
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 3566666668999999999999998754 45677777788888888888888887653
No 151
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=66.52 E-value=18 Score=21.57 Aligned_cols=47 Identities=17% Similarity=0.136 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
+.=+.|+++...|++.|++|+..-+. ..++...++.+.....++-++
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~~~~~vP~l 55 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIKRSGRTTVPQI 55 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHHSSCCSCEE
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHHhCCCCcCEE
Confidence 34489999999999999998866554 356666667654444555333
No 152
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=66.38 E-value=19 Score=27.77 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=43.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHh-------------------hCCCeEEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-------------------ERGIKIIIV 119 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~-------------------~~g~~ViIA 119 (131)
.+.++|.|. + .+.+.++..|.+.| ++.| .+|++++..++++... -.+++++|.
T Consensus 128 ~k~vlV~Ga-G--giG~aia~~L~~~G---~V~v--~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn 199 (287)
T 1nvt_A 128 DKNIVIYGA-G--GAARAVAFELAKDN---NIII--ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIIN 199 (287)
T ss_dssp SCEEEEECC-S--HHHHHHHHHHTSSS---EEEE--ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEE
T ss_pred CCEEEEECc-h--HHHHHHHHHHHHCC---CEEE--EECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEE
Confidence 357788897 4 88899999998888 5555 5799998887764421 145799999
Q ss_pred ecCcCC
Q 032873 120 GDGVEA 125 (131)
Q Consensus 120 ~AG~aA 125 (131)
.+|...
T Consensus 200 ~ag~~~ 205 (287)
T 1nvt_A 200 ATPIGM 205 (287)
T ss_dssp CSCTTC
T ss_pred CCCCCC
Confidence 988644
No 153
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=66.23 E-value=16 Score=29.66 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=45.2
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 112 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~ 112 (131)
.+..|+.|.+.+ .-+++--.+.|+++||.++..-.++.-+.+++.+.++...++
T Consensus 36 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 90 (285)
T 3l07_A 36 KLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNND 90 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 578888898754 456677888999999999999999999999999999776543
No 154
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=66.01 E-value=9.8 Score=28.55 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=44.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCee---EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYE---IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~e---v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+|+.+.-.+-.-.+.|.+.|++.|+..+ ++|=.|--.|--..++++ ...++.+||.
T Consensus 3 ~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaL 64 (156)
T 2b99_A 3 KKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMAL 64 (156)
T ss_dssp CEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEE
T ss_pred cEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEe
Confidence 4799999987776667889999999999877 456667777766655554 4568888875
No 155
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=65.91 E-value=29 Score=26.92 Aligned_cols=26 Identities=15% Similarity=0.063 Sum_probs=15.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.+|++|+|+.+- +.+.+++.|-+-|-
T Consensus 9 gKvalVTGas~G--IG~aia~~la~~Ga 34 (255)
T 4g81_D 9 GKTALVTGSARG--LGFAYAEGLAAAGA 34 (255)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 467888887763 34445555555553
No 156
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=65.84 E-value=14 Score=28.62 Aligned_cols=55 Identities=11% Similarity=0.197 Sum_probs=41.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+|+ |..+-.+ .+..+.+-||++.+.... .++++..+.++.+.++|++|||++
T Consensus 107 ~kIavV-g~~~~~~---~~~~i~~ll~~~i~~~~~---~~~ee~~~~i~~l~~~G~~vVVG~ 161 (225)
T 2pju_A 107 SSIGVV-TYQETIP---ALVAFQKTFNLRLDQRSY---ITEEDARGQINELKANGTEAVVGA 161 (225)
T ss_dssp SCEEEE-EESSCCH---HHHHHHHHHTCCEEEEEE---SSHHHHHHHHHHHHHTTCCEEEES
T ss_pred CcEEEE-eCchhhh---HHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCCEEECC
Confidence 468777 4444433 445566678887776654 689999999999999999999985
No 157
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=65.41 E-value=13 Score=27.75 Aligned_cols=55 Identities=18% Similarity=0.237 Sum_probs=38.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+++ |..+-.+ .+..+.+-||++.+.... .++++..+.++.+.++|++|||++
T Consensus 95 ~kIavv-g~~~~~~---~~~~~~~ll~~~i~~~~~---~~~~e~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 95 NELALI-AYKHSIV---DKHEIEAMLGVKIKEFLF---SSEDEITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp SEEEEE-EESSCSS---CHHHHHHHHTCEEEEEEE---CSGGGHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEE-eCcchhh---HHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCeEEECC
Confidence 467766 3333322 344455667886665544 789999999999999999999985
No 158
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=65.25 E-value=17 Score=29.52 Aligned_cols=54 Identities=11% Similarity=0.138 Sum_probs=45.0
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 112 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~ 112 (131)
.+..|+.|.+.+ ..+++--.+.|+++||.++.....+.-+.+++.+.++...+.
T Consensus 37 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 91 (286)
T 4a5o_A 37 GLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDD 91 (286)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 578888887644 456777888999999999999999999999999999777543
No 159
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=65.24 E-value=5.5 Score=32.84 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=27.2
Q ss_pred EEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 90 IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 90 v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
.+|+..|.....+.++.+. .+++|+++|...-++
T Consensus 204 ATVTi~Hs~T~dl~~~~~~-----ADIvV~A~G~p~~i~ 237 (303)
T 4b4u_A 204 ATVTICHSRTQNLPELVKQ-----ADIIVGAVGKAELIQ 237 (303)
T ss_dssp CEEEEECTTCSSHHHHHHT-----CSEEEECSCSTTCBC
T ss_pred CEEEEecCCCCCHHHHhhc-----CCeEEeccCCCCccc
Confidence 4677789888888888753 699999999987654
No 160
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=65.15 E-value=29 Score=28.08 Aligned_cols=66 Identities=12% Similarity=0.106 Sum_probs=47.8
Q ss_pred CeEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC-------C-hHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~S----Dl~~~~ka~~~L~~fGI~~ev~V~SAHR-------t-p~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
-+|+||.=|.. |....+.+.+.|+++|..+.+.=. +.+ + -+|..++.+...+..++.|+++-|+-.
T Consensus 13 D~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (331)
T 4e5s_A 13 DEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTH-AEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYN 90 (331)
T ss_dssp CEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 47999976544 578899999999999986543210 111 2 246677777777888999999999854
No 161
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=64.94 E-value=33 Score=24.07 Aligned_cols=50 Identities=24% Similarity=0.240 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHHHh-CCCeeEEEEcCCC-------------------C--hHH--HHHHHHHHhhCCCeEEE
Q 032873 69 LDLPVMNDAARTLSDF-GVPYEIKILPPHQ-------------------N--CKE--ALSYALSAKERGIKIII 118 (131)
Q Consensus 69 SDl~~~~ka~~~L~~f-GI~~ev~V~SAHR-------------------t--p~~--~~~~~~~~~~~g~~ViI 118 (131)
.+...+++..+.++++ |+...+.+.-.|. . +++ +.++.+.+.+.|+.+.|
T Consensus 107 ~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 107 ADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4577788888888888 7633344333332 1 245 77777778888888877
No 162
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=64.92 E-value=13 Score=28.09 Aligned_cols=48 Identities=13% Similarity=0.108 Sum_probs=32.6
Q ss_pred CeEEEE---eccCCCHHHHHHHHHHHHHhCCCeeEEEEc-CCCChHHHHHHHHH
Q 032873 59 PIVGII---MESDLDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALS 108 (131)
Q Consensus 59 ~~V~Ii---mGS~SDl~~~~ka~~~L~~fGI~~ev~V~S-AHRtp~~~~~~~~~ 108 (131)
++|++| +|..+.-...+...+.|+++|++ +.++. .++.|++..+.++.
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~ 79 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRK 79 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHh
Confidence 688888 44334457889999999999984 55543 22567766666653
No 163
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=64.42 E-value=19 Score=29.22 Aligned_cols=54 Identities=11% Similarity=0.121 Sum_probs=45.2
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 112 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~ 112 (131)
.+..|+.|.+.+ ..+++--.+.|+++||.++.....+.-+.+++.+.++...+.
T Consensus 35 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 89 (285)
T 3p2o_A 35 CLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHD 89 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 578888897754 456777888999999999999999999999999999777543
No 164
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=64.13 E-value=22 Score=23.82 Aligned_cols=51 Identities=12% Similarity=0.010 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCC-CeeEEEEcCCCChHHHHHHHHH-HhhCCCeEEEEecCcCCcC
Q 032873 74 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALS-AKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 74 ~~ka~~~L~~fGI-~~ev~V~SAHRtp~~~~~~~~~-~~~~g~~ViIA~AG~aAhL 127 (131)
++++.+.+++.|+ +++..+....... ..+++. +++.+++.||.++-+-..+
T Consensus 81 l~~~~~~~~~~g~~~~~~~v~~~g~~~---~~I~~~~a~~~~~DlIV~G~~g~~~~ 133 (156)
T 3fg9_A 81 VAEYVQLAEQRGVNQVEPLVYEGGDVD---DVILEQVIPEFKPDLLVTGADTEFPH 133 (156)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECSCHH---HHHHHTHHHHHCCSEEEEETTCCCTT
T ss_pred HHHHHHHHHHcCCCceEEEEEeCCCHH---HHHHHHHHHhcCCCEEEECCCCCCcc
Confidence 4445555667899 4888887533333 344555 5567789988887654443
No 165
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=63.91 E-value=36 Score=25.36 Aligned_cols=62 Identities=18% Similarity=0.194 Sum_probs=41.2
Q ss_pred eEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEc-CCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SD--l~~~~ka~~~L~~fGI~~ev~V~S-AHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
.|+++....++ ....+.+.+.++++|+ ++.+.. ....+++..++++....++++.||.....
T Consensus 3 ~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 67 (313)
T 2h3h_A 3 TIGVIGKSVHPYWSQVEQGVKAAGKALGV--DTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSD 67 (313)
T ss_dssp EEEEECSCSSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 57788765544 2344556667788885 455543 36678888888877777888888876543
No 166
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=63.76 E-value=9.7 Score=26.38 Aligned_cols=41 Identities=12% Similarity=0.154 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChHHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 109 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~-V~SAHRtp~~~~~~~~~~ 109 (131)
+.=+.|++|.+.|++-||+|+.+ |..-.-+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 12 PACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 34579999999999999999855 555566778888887654
No 167
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=63.50 E-value=19 Score=28.17 Aligned_cols=59 Identities=17% Similarity=0.082 Sum_probs=40.9
Q ss_pred eEEEEe----ccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 60 IVGIIM----ESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 60 ~V~Iim----GS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
++.||. |+..-....+++...|++.|+++++..+ ..+....++++++.+ +++++|++-|
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t---~~~~~a~~~~~~~~~-~~d~vv~~GG 72 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT---KEQGDATKYCQEFAS-KVDLIIVFGG 72 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC---CSTTHHHHHHHHHTT-TCSEEEEEEC
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc---cCcchHHHHHHHhhc-CCCEEEEEcc
Confidence 566664 3333246678899999999998887654 456677777876654 7888777655
No 168
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=63.49 E-value=9.5 Score=24.31 Aligned_cols=58 Identities=16% Similarity=-0.023 Sum_probs=43.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE-------EEE-cCCCChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEI-------KIL-PPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev-------~V~-SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
.-.|-.||-+|.+-+++...-|...|++..+ ||. .+..+-++..+........|+.-+
T Consensus 9 ~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~ 74 (81)
T 1uta_A 9 RWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNC 74 (81)
T ss_dssp BCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCC
T ss_pred cEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcE
Confidence 4668889999999999999999999987432 232 366677788888877766676433
No 169
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=63.44 E-value=28 Score=27.54 Aligned_cols=61 Identities=20% Similarity=0.321 Sum_probs=40.1
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl-~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.++.||.=..|.- ...+++.+.|++.|+++++.... .+....++++.+...+++++|++-|
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv~GG 91 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIAGGG 91 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEEEES
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEEEcc
Confidence 3577775433321 56788899999999988877653 2445566665555566887777655
No 170
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=63.24 E-value=42 Score=24.67 Aligned_cols=62 Identities=8% Similarity=-0.033 Sum_probs=43.9
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEE-EcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V-~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|+++.-+.++- ...+.+.+.++++|+ ++.+ ...+..+++..++++....++++.||....
T Consensus 5 ~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 70 (305)
T 3g1w_A 5 ETYMMITFQSGMDYWKRCLKGFEDAAQALNV--TVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAI 70 (305)
T ss_dssp CEEEEEESSTTSTHHHHHHHHHHHHHHHHTC--EEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCS
T ss_pred ceEEEEEccCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 3677777665552 345566677788886 4455 467888999888888887788888776543
No 171
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=63.09 E-value=42 Score=24.60 Aligned_cols=60 Identities=12% Similarity=0.322 Sum_probs=41.1
Q ss_pred eEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 60 IVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 60 ~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.|++++-..++ ....+.+.+.+++.|. ++.+.+....+++-.++++....++++-||...
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINP 65 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 57888766555 2455566677788885 556666677777777777777677787777644
No 172
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=63.03 E-value=16 Score=27.82 Aligned_cols=60 Identities=10% Similarity=0.036 Sum_probs=37.9
Q ss_pred CeEEEEeccCCCH--HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl--~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+||.++++|. ...+...+.|++.|++....... .....+...++.....+.++|++.
T Consensus 150 ~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~--~~~~d~~~~~~~l~~~~~d~v~~~ 211 (366)
T 3td9_A 150 KRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFR--SGDQDFSAQLSVAMSFNPDAIYIT 211 (366)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEEC--TTCCCCHHHHHHHHHTCCSEEEEC
T ss_pred cEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeC--CCCccHHHHHHHHHhcCCCEEEEc
Confidence 4799998765554 34566677888999976544422 233344445555556678888774
No 173
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=62.76 E-value=15 Score=28.71 Aligned_cols=48 Identities=6% Similarity=-0.063 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcC------CC-ChHHHHHHHHHHhhCCCeEE
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKII 117 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SA------HR-tp~~~~~~~~~~~~~g~~Vi 117 (131)
++..++++.+.+++.|++++..+..+ .| +|+++.++++.+.+-|++.|
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 67778888999999999988666654 34 58999999988888888654
No 174
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=62.49 E-value=37 Score=25.39 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 68 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 68 ~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
......++++.+.++..|++++..+.......+ .+++.+++++++.+|.+.-+...+.
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~---~i~~~a~~~~~dliV~G~~~~~~~~ 104 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQ---TIIAEQQAEGCGLIIKQHFPDNPLK 104 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHH---HHHHHHHHHTCSEEEEECCCSCTTS
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHH---HHHHHHHhcCCCEEEEecccCCchh
Confidence 556778888888999999999998873333333 3445555677888888876655444
No 175
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=62.15 E-value=0.69 Score=37.74 Aligned_cols=64 Identities=9% Similarity=0.053 Sum_probs=41.3
Q ss_pred CeEEEEeccCCCHHH-HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPV-MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~-~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.+|.||++....... .++..+.|++.| +++.+.+-+-+.+.+.+.++.+.+ ++++|||+-|++.
T Consensus 42 ~~~liVtd~~~~~~~~~~~v~~~L~~~g--~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv 106 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVR--VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKT 106 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSE--EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHH
T ss_pred CeEEEEECccHHhhccHHHHHHHHHHcC--CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHH
Confidence 378999876432221 444455555555 345555555555677777766666 8999999999863
No 176
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=61.95 E-value=8.7 Score=26.66 Aligned_cols=41 Identities=5% Similarity=0.011 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChHHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 109 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~-V~SAHRtp~~~~~~~~~~ 109 (131)
+.=+.|++|.+.|++-||+|+.+ |..-.-+.+++.++++..
T Consensus 13 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 13 PRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp TTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 44679999999999999999865 444556777888877644
No 177
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=61.93 E-value=24 Score=25.00 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 109 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~ 109 (131)
.|..|..+|+..||+|+..=++ ..|+...++.+..
T Consensus 18 ~c~~aK~lL~~kgV~feEidI~--~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 18 KQQDVLGFLEANKIGFEEKDIA--ANEENRKWMRENV 52 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT--TCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHhc
Confidence 3589999999999999876666 3677777777655
No 178
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=61.82 E-value=13 Score=24.67 Aligned_cols=55 Identities=11% Similarity=-0.000 Sum_probs=37.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH-hhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~g~-~ViI 118 (131)
.|.|.. .+.=|.|.++.+.|++.||+|+..=+ -..|+...++.+.. ..+.+ .|||
T Consensus 5 ~I~vYs--~~~Cp~C~~aK~~L~~~gi~y~~idi--~~d~~~~~~~~~~~~G~~tVP~I~i 61 (92)
T 2lqo_A 5 ALTIYT--TSWCGYCLRLKTALTANRIAYDEVDI--EHNRAAAEFVGSVNGGNRTVPTVKF 61 (92)
T ss_dssp CEEEEE--CTTCSSHHHHHHHHHHTTCCCEEEET--TTCHHHHHHHHHHSSSSSCSCEEEE
T ss_pred cEEEEc--CCCCHhHHHHHHHHHhcCCceEEEEc--CCCHHHHHHHHHHcCCCCEeCEEEE
Confidence 344443 56779999999999999999985544 46787776666533 23444 4555
No 179
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=61.62 E-value=41 Score=25.40 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=43.3
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 57 ~~~~V~IimGS~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
....|++++...++ ....+.+.+.+++.|. ++.+......+++..++++....++++-+|...
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 124 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKY--NIILSNSDQNQDKELHLLNNMLGKQVDGIIFMS 124 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTC--EEEEEECCSHHHHHHHHHHHTSCCSSCCEEECC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEec
Confidence 34589999876544 3556677778888886 555666666777777888877777887777654
No 180
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=61.62 E-value=7.5 Score=30.83 Aligned_cols=38 Identities=13% Similarity=0.047 Sum_probs=22.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC 99 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp 99 (131)
++|.|+ |+...-.-+....+.|++.|+ ++.+++.|..|
T Consensus 5 ~~vLiV-~g~~~~~~a~~l~~aL~~~g~--~V~~i~~~~~~ 42 (259)
T 3rht_A 5 TRVLYC-GDTSLETAAGYLAGLMTSWQW--EFDYIPSHVGL 42 (259)
T ss_dssp -CEEEE-ESSCTTTTHHHHHHHHHHTTC--CCEEECTTSCB
T ss_pred ceEEEE-CCCCchhHHHHHHHHHHhCCc--eEEEecccccc
Confidence 478888 443344455666778888775 44445555443
No 181
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=61.56 E-value=23 Score=28.51 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
.+.-+. .++++|++.-.++++--|+.+++.+++..+...|++=|.|..|--
T Consensus 60 t~~~a~-~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 110 (310)
T 3apt_A 60 SVAWAQ-RIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDP 110 (310)
T ss_dssp HHHHHH-HHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred HHHHHH-HHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 444444 445899999999999999999999999999999999999998864
No 182
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=61.38 E-value=20 Score=26.63 Aligned_cols=53 Identities=11% Similarity=0.049 Sum_probs=35.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHH-hCCCeeEEEEcCC-----------CChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSD-FGVPYEIKILPPH-----------QNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~-fGI~~ev~V~SAH-----------Rtp~~~~~~~~~~~~ 111 (131)
.+|+||.||.+.-..-.+.++.+.+ +.=.+++.++... ..|+.+.++.+...+
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~ 67 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEH 67 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHh
Confidence 4799999999887766666666543 3334677776532 246677777766555
No 183
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=61.26 E-value=17 Score=28.24 Aligned_cols=44 Identities=11% Similarity=0.105 Sum_probs=38.2
Q ss_pred HHHHHHhCCCeeEEEEcCCCCh-HHHHHHHHHHhhCCCeEEEEec
Q 032873 78 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 78 ~~~L~~fGI~~ev~V~SAHRtp-~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|+.+|+.+-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999999875 5788888999999999999873
No 184
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=61.25 E-value=48 Score=24.69 Aligned_cols=54 Identities=9% Similarity=0.094 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
.....+++.+.|++.|++++..+..- +-...+.+.+++.+++.+|.++-+-..+
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~~ 265 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGSV 265 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSCH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCCc
Confidence 57788888889999999988877643 3344555666677888888888665543
No 185
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=61.23 E-value=24 Score=28.62 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=43.9
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.++.|+.|.+.+ .-+++.-.+.|+++||.++..-..+.-+.+++.+.++...+
T Consensus 34 ~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~ 87 (281)
T 2c2x_A 34 GLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNA 87 (281)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 578888887654 44566778889999999999999999999999999976643
No 186
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=61.23 E-value=24 Score=28.48 Aligned_cols=52 Identities=10% Similarity=-0.084 Sum_probs=43.6
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.+..|+.|.+.+ .-+++--.+.|+++|| ++.....+.-+-+++.+.++...+
T Consensus 29 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~ 81 (276)
T 3ngx_A 29 SLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAK 81 (276)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcC
Confidence 578888997754 5577778889999999 999999999999999999976644
No 187
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=60.91 E-value=35 Score=25.00 Aligned_cols=47 Identities=9% Similarity=-0.031 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
..++..+.|++.|+.+..--....+..+.+.+.++.++.-|++.++.
T Consensus 64 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 110 (262)
T 3p6l_A 64 TQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITC 110 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 34444444555554433222222233444444444444444444444
No 188
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=60.74 E-value=60 Score=26.36 Aligned_cols=66 Identities=15% Similarity=0.123 Sum_probs=46.5
Q ss_pred CeEEEEeccCC------CHHHHHHHHHHHHHhCCCeeEEEEcCCCC--------hHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 59 PIVGIIMESDL------DLPVMNDAARTLSDFGVPYEIKILPPHQN--------CKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~S------Dl~~~~ka~~~L~~fGI~~ev~V~SAHRt--------p~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
-+|+|+.=|.. +....+.+.+.|+++|..+.+.= .+.+. -+|..++.+...+..++.|+++-|+-
T Consensus 6 D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 84 (346)
T 4eys_A 6 STIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFLP-HSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAIGGD 84 (346)
T ss_dssp CEEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEEEECT-TTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECCCCS
T ss_pred cEEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEEEECC-chhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 47999975542 35678999999999998554320 23332 34666677777778899999999985
Q ss_pred C
Q 032873 125 A 125 (131)
Q Consensus 125 A 125 (131)
.
T Consensus 85 g 85 (346)
T 4eys_A 85 D 85 (346)
T ss_dssp C
T ss_pred C
Confidence 4
No 189
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.66 E-value=29 Score=25.78 Aligned_cols=59 Identities=10% Similarity=0.008 Sum_probs=38.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
.++.++.....-.+ .+.+++++++. ++.|.- ...++..+.++.. +.|++|||+--|.+.
T Consensus 5 ~~I~~iapy~~l~~---~~~~i~~e~~~--~i~i~~--~~l~~~v~~a~~~-~~~~dVIISRGgta~ 63 (196)
T 2q5c_A 5 LKIALISQNENLLN---LFPKLALEKNF--IPITKT--ASLTRASKIAFGL-QDEVDAIISRGATSD 63 (196)
T ss_dssp CEEEEEESCHHHHH---HHHHHHHHHTC--EEEEEE--CCHHHHHHHHHHH-TTTCSEEEEEHHHHH
T ss_pred CcEEEEEccHHHHH---HHHHHHhhhCC--ceEEEE--CCHHHHHHHHHHh-cCCCeEEEECChHHH
Confidence 46777776543333 45556667776 444432 3478888888777 889999999766554
No 190
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=60.43 E-value=30 Score=24.17 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=43.6
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee--------------------EEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~e--------------------v~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
.++.|.-+=...++.....|..+|.++. +-++|.-....++.+.++.++++|++++
T Consensus 52 I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi 127 (183)
T 2xhz_A 52 VVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLI 127 (183)
T ss_dssp EEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEE
T ss_pred EEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 3456666666788888888888888642 5678888888899999999999998764
No 191
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=59.99 E-value=12 Score=25.81 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALS 108 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~-V~SAHRtp~~~~~~~~~ 108 (131)
+.=+.|++|.+.|++-||+|+.+ |..-.-+.+++.++++.
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence 34579999999999999999865 44445667777777754
No 192
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=59.76 E-value=8.2 Score=26.70 Aligned_cols=41 Identities=10% Similarity=0.066 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChHHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 109 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~-V~SAHRtp~~~~~~~~~~ 109 (131)
+.=+.|++|.+.|++-||+|+.+ |..-.-+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 44679999999999999999865 555666788888888654
No 193
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=59.60 E-value=34 Score=25.33 Aligned_cols=58 Identities=16% Similarity=0.227 Sum_probs=46.0
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCee--------------------EEEEcCCCChHHHHHHHHHHhh--CCCeEEE
Q 032873 61 VGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKE--RGIKIII 118 (131)
Q Consensus 61 V~IimGS~SDl~~~~ka~~~L~~fGI~~e--------------------v~V~SAHRtp~~~~~~~~~~~~--~g~~ViI 118 (131)
-.++.|.-+-...++.....|..+|+++. +-++|.-....++.+.++.+++ +|++++.
T Consensus 61 ~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~ 140 (220)
T 3etn_A 61 KLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIV 140 (220)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEE
Confidence 34666766668899999999999998643 5667777778899999999999 9987653
No 194
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=59.38 E-value=17 Score=23.72 Aligned_cols=57 Identities=9% Similarity=0.029 Sum_probs=36.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-ChHHHHHHHHH-HhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-NCKEALSYALS-AKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR-tp~~~~~~~~~-~~~~g~-~ViI 118 (131)
.|.+.+. +.=+.|+++...|+++|++|+..-+..+. ...++.+++.. ...+.+ .+||
T Consensus 20 ~v~vy~~--~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi 79 (113)
T 3rhb_A 20 TVVIYSK--TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFV 79 (113)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 3656554 45699999999999999999877666542 22344444432 233333 5555
No 195
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=59.30 E-value=18 Score=25.08 Aligned_cols=39 Identities=10% Similarity=0.052 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCC-CChHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYAL 107 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAH-Rtp~~~~~~~~ 107 (131)
+.=+.|++|...|++.||+|++.=+.-+ -+.+++.++.+
T Consensus 9 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 9 PSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence 4558999999999999999987655433 44567776664
No 196
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=58.81 E-value=24 Score=25.68 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=39.4
Q ss_pred CCCeEEEEeccCCCHH------HHHHHHHHHHHhCCCee-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 57 DAPIVGIIMESDLDLP------VMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~------~~~ka~~~L~~fGI~~e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
..++|+||.=|+.=.+ -..-....|+++|.... ..++ .-. +.+.+-++.+.+.+++++|.-.|.+.
T Consensus 6 ~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv-~Dd--~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVV-ADG--SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp -CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEE-CSS--HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEe-CCH--HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 3478999876543110 11345667889998654 3333 222 55555555554456899998888764
No 197
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=58.73 E-value=45 Score=25.81 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=17.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCC--eeEEEEcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPPH 96 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~--~ev~V~SAH 96 (131)
.++-|+| ++.+.+.++++.+.+.|.. .|+.+.|++
T Consensus 96 ~~~~i~g--~~~~~~~~~a~~~~~~g~d~~iein~~~P~ 132 (311)
T 1jub_A 96 IFFSIAG--MSAAENIAMLKKIQESDFSGITELNLSCPN 132 (311)
T ss_dssp CEEEECC--SSHHHHHHHHHHHHHSCCCSEEEEESCCCC
T ss_pred EEEEcCC--CCHHHHHHHHHHHHhcCCCeEEEEeccCCC
Confidence 3444443 3445555555555555554 455554444
No 198
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=58.68 E-value=44 Score=25.17 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=17.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.+++++|+|..+ -+...+++.|-+-|.
T Consensus 23 ~~k~~lVTGas~--GIG~aia~~la~~G~ 49 (279)
T 3sju_A 23 RPQTAFVTGVSS--GIGLAVARTLAARGI 49 (279)
T ss_dssp --CEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 357999999887 455566666666664
No 199
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=58.28 E-value=46 Score=25.00 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=40.8
Q ss_pred EEeccCCCHHHHHHH-----------------------HHHHHHhCCCeeEEEEcCCCCh-HHHHHHHHHHhhCCCeEEE
Q 032873 63 IIMESDLDLPVMNDA-----------------------ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIII 118 (131)
Q Consensus 63 IimGS~SDl~~~~ka-----------------------~~~L~~fGI~~ev~V~SAHRtp-~~~~~~~~~~~~~g~~ViI 118 (131)
++.||..|+..++++ .+.|.++|+.+-+-..|=+|.| +++.++++.+.+.|.++++
T Consensus 37 ~~~~~~~~l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv 116 (219)
T 2h6r_A 37 GVAPQFVDLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIV 116 (219)
T ss_dssp EEECCTTTHHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCHHHHHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 566777777666553 4566777776554433333554 5788888888888999999
Q ss_pred EecC
Q 032873 119 VGDG 122 (131)
Q Consensus 119 A~AG 122 (131)
++.-
T Consensus 117 ~v~~ 120 (219)
T 2h6r_A 117 CTNN 120 (219)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8853
No 200
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=58.15 E-value=47 Score=30.09 Aligned_cols=62 Identities=19% Similarity=0.112 Sum_probs=47.0
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE------cCCC---ChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL------PPHQ---NCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 61 V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~------SAHR---tp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
+.-|..|.||+..++++.+.+++.|..++..++ +++| +|+.+.++++.+.+-|++. |+++-+
T Consensus 213 ~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~-I~l~DT 283 (718)
T 3bg3_A 213 VFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHI-LCIKDM 283 (718)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSE-EEEECT
T ss_pred EEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCE-EEEcCc
Confidence 344557899999999999999999977665553 5577 5899999998888888874 344333
No 201
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=58.00 E-value=28 Score=24.94 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=32.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ 97 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR 97 (131)
+..+|+|+..-..+..-+-...+.|++-| |+++++|.+.
T Consensus 4 m~kkv~ill~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~ 42 (190)
T 4e08_A 4 MSKSALVILAPGAEEMEFIIAADVLRRAG--IKVTVAGLNG 42 (190)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCcEEEEEECCCchHHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 44689999998888777778888999877 7999999887
No 202
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=57.60 E-value=25 Score=28.12 Aligned_cols=57 Identities=7% Similarity=0.076 Sum_probs=43.2
Q ss_pred EEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcCC------C-ChHHHHHHHHHHhhCCCeEE
Q 032873 61 VGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPPH------Q-NCKEALSYALSAKERGIKII 117 (131)
Q Consensus 61 V~IimGS~SDl--------------~~~~ka~~~L~~fGI~~ev~V~SAH------R-tp~~~~~~~~~~~~~g~~Vi 117 (131)
+.-+..|.||. +.++++.+.+++.|..++..+..+. | .|+.+.++++.+.+-|++.|
T Consensus 97 ~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 174 (307)
T 1ydo_A 97 EACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISEL 174 (307)
T ss_dssp EEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCE
T ss_pred EEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 33445688985 6778889999999998887776642 2 57899999988888888654
No 203
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=57.59 E-value=31 Score=28.35 Aligned_cols=55 Identities=4% Similarity=-0.043 Sum_probs=41.0
Q ss_pred EEEEeccCCC-------------HHHHHHHHHHHHHhC--CCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeE
Q 032873 61 VGIIMESDLD-------------LPVMNDAARTLSDFG--VPYEIKILPPHQN-CKEALSYALSAKERGIKI 116 (131)
Q Consensus 61 V~IimGS~SD-------------l~~~~ka~~~L~~fG--I~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~V 116 (131)
+.-+..|.|| ++.+.++.+.+++.| +.+.+....+.|+ |+.+.++++.+.+- ++.
T Consensus 90 ~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~ 160 (382)
T 2ztj_A 90 GIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDR 160 (382)
T ss_dssp EEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSE
T ss_pred EEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCE
Confidence 3444557888 788999999999999 8777777778885 78888888887766 653
No 204
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=57.37 E-value=48 Score=27.92 Aligned_cols=60 Identities=17% Similarity=0.100 Sum_probs=41.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
....|.|+.-++..+..+.+.+..|.+-||.+|+- ++.-..+..-+++|...|+...|.+
T Consensus 418 ~~~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 477 (517)
T 4g85_A 418 TETQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 477 (517)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC----SSSSCCHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 34578888888888999999999999999998873 3222234444455666777554443
No 205
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=57.16 E-value=38 Score=22.13 Aligned_cols=50 Identities=20% Similarity=0.203 Sum_probs=32.3
Q ss_pred HHHHHHHHH----hCC-CeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 75 NDAARTLSD----FGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 75 ~ka~~~L~~----fGI-~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
+++.+.|++ .|+ +++..+..- .| ...+++.+++.+++.+|.++-+-..+.
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~ 114 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLEG--VP--AEAILQAARAEKADLIVMGTRGLGALG 114 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEES--SH--HHHHHHHHHHTTCSEEEEESSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEec--CH--HHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 344445544 799 888877632 33 345566677788999998877655544
No 206
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=56.70 E-value=17 Score=25.85 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~ 104 (131)
|.+.++.-+|++.||+||+.-+.....|+.+.+
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~~~ 45 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLAV 45 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHHHH
Confidence 789999999999999999888776656655433
No 207
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=56.67 E-value=9.8 Score=25.98 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCC-CChHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALS 108 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAH-Rtp~~~~~~~~~ 108 (131)
+.=+.|++|...|++.||+|+.+=+..+ -+.+++.++.+.
T Consensus 13 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~ 53 (120)
T 2kok_A 13 KNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKT 53 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHH
Confidence 3448999999999999999987655432 345777777753
No 208
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=56.35 E-value=37 Score=25.13 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=40.6
Q ss_pred CCCeEEEEec----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 57 DAPIVGIIME----SDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 57 ~~~~V~IimG----S~SD---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+...|++++- +.++ ....+.+.+.+++.|.... +...+. +++..++.+....++++-+|....
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~--~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~ 74 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLL--LIPDEP-GEKYQSLIHLVETRRVDALIVAHT 74 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEE--EEEECT-TCCCHHHHHHHHHTCCSEEEECSC
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEE--EEeCCC-hhhHHHHHHHHHcCCCCEEEEeCC
Confidence 3357999997 4444 3456677788888986544 444443 555566666666777877776543
No 209
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=55.98 E-value=67 Score=25.52 Aligned_cols=54 Identities=19% Similarity=0.146 Sum_probs=35.5
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCC----------hHHHHHHHHHHhhC
Q 032873 57 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQN----------CKEALSYALSAKER 112 (131)
Q Consensus 57 ~~~~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRt----------p~~~~~~~~~~~~~ 112 (131)
...+|.||.||... ...++.+++.|++.|+ ++.++..... |+.+.++.+....-
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~--eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~A 124 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA--ETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWS 124 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTC--EEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHC
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCC--EEEEEehhcCCCCccCccCCCHHHHHHHHHHHHC
Confidence 34689999999853 3455667777777787 4555554433 46677777666553
No 210
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=55.90 E-value=21 Score=22.63 Aligned_cols=55 Identities=9% Similarity=-0.005 Sum_probs=34.4
Q ss_pred eEEEEeccCCCHHHH------HHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHh--hCC-CeEEE
Q 032873 60 IVGIIMESDLDLPVM------NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK--ERG-IKIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~------~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~--~~g-~~ViI 118 (131)
.|.|.+- +-=+.| ++|.+.|++.||+|+..=+..+ |+...++.+... .+. ..|||
T Consensus 3 ~v~ly~~--~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~--~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 3 GLRVYST--SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD--NALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC--HHHHHHHHHHTTCTTCCSCEEEE
T ss_pred CEEEEEc--CCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHhCCCCCCCCEEEE
Confidence 4555543 344667 8999999999999987766544 555444544332 112 36665
No 211
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=55.20 E-value=9.8 Score=26.54 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCC-CChHHHHHHHHHHhhCCCeEEEEe
Q 032873 74 MNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAH-Rtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+++.+.|++.||+|+..-...- +|-+++.++..-..++-+|-++.-
T Consensus 2 ~~~~~~~L~~~~i~~~~~~~p~~~~t~~~~a~~lg~~~~~~~Ktlv~~ 49 (152)
T 1wdv_A 2 LEKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVL 49 (152)
T ss_dssp -CHHHHHHHHHTCCCEEEECSSCCSSHHHHHHHHTSCGGGBEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEcCCCCCCHHHHHHHcCCCHHHeEEEEEEE
Confidence 46788999999999998776655 777887777644334445554443
No 212
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=55.07 E-value=30 Score=24.04 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=42.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHH---hCCCeeEEEEcCCCChHHHHHHHHHH-hhC-CCeEEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSD---FGVPYEIKILPPHQNCKEALSYALSA-KER-GIKIIIV 119 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~---fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~-g~~ViIA 119 (131)
.|.|.+- +-=|.|.++.+.|++ +|++|+..=+..+-.++++.++++.. ..+ -..|||-
T Consensus 15 ~Vvvysk--~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~ 77 (127)
T 3l4n_A 15 PIIIFSK--STCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVN 77 (127)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEET
T ss_pred CEEEEEc--CCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEEC
Confidence 4777765 557999999999998 48999887777887778888877543 222 2377764
No 213
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=54.98 E-value=38 Score=24.54 Aligned_cols=60 Identities=13% Similarity=0.132 Sum_probs=46.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee---------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~e---------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.++.|.-+=...++.....|..+|+++. +-++|.-....++.+.++.++++|+++| ++.+
T Consensus 50 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI-~IT~ 124 (200)
T 1vim_A 50 IFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLV-AVTG 124 (200)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEE-EEES
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEE-EEEC
Confidence 3455665557788898888989998643 5778888888999999999999998765 4443
No 214
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=54.60 E-value=5.4 Score=28.69 Aligned_cols=52 Identities=15% Similarity=0.167 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEE--cC--CCChHHHHHHHHHHhhCCCeEEEE
Q 032873 68 DLDLPVMNDAARTLSDFGVPYEIKIL--PP--HQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 68 ~SDl~~~~ka~~~L~~fGI~~ev~V~--SA--HRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
.||+..+..+.+.|++.||+|++.-. ++ .++.++..++..-...+-+|-++.
T Consensus 2 ~~~~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~~~~~~~~Ktlv~ 57 (166)
T 2dxa_A 2 SSGSSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLV 57 (166)
T ss_dssp ------CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHTCCTTTEEEEEEE
T ss_pred CCCCCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcCCCHHHeeEEEEE
Confidence 36788888999999999999998642 33 256677766663333333444433
No 215
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=53.98 E-value=12 Score=25.34 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEc-CCCChHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALS 108 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~S-AHRtp~~~~~~~~~ 108 (131)
+.=+.|++|.+.|++.||+|+..=+. -.-+.+++.++++.
T Consensus 8 ~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~ 48 (114)
T 1rw1_A 8 KACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHh
Confidence 45589999999999999999866554 33455787777753
No 216
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=53.98 E-value=38 Score=21.20 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=18.6
Q ss_pred EeccCCCHHHHHHHHHHHHHhCCCeeEEEE
Q 032873 64 IMESDLDLPVMNDAARTLSDFGVPYEIKIL 93 (131)
Q Consensus 64 imGS~SDl~~~~ka~~~L~~fGI~~ev~V~ 93 (131)
||=+.++++ ...+.|++.||+|++.+-
T Consensus 43 i~V~p~~~~---~f~~~L~~~~i~~~v~i~ 69 (79)
T 1vjq_A 43 ILIPSDMVE---WFLEMLKAKGIPFTVYVE 69 (79)
T ss_dssp EEECGGGHH---HHHHHHHHTTCCEEEEEE
T ss_pred EEECHHHHH---HHHHHHHHCCCcEEEEeh
Confidence 344455554 455678999999998863
No 217
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=53.93 E-value=28 Score=27.05 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=27.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC----eeEEEEcCCC--------ChHHHHHHHHHH
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP----YEIKILPPHQ--------NCKEALSYALSA 109 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~----~ev~V~SAHR--------tp~~~~~~~~~~ 109 (131)
|.++-|+| ++.+.+.++++.+.+.|+. .|+.+.|++. .|+.+.++++..
T Consensus 95 p~~~~i~g--~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~v 155 (314)
T 2e6f_A 95 PLFLSISG--LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQV 155 (314)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHH
T ss_pred cEEEEeCC--CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHH
Confidence 45666665 3555666666666666655 5666655442 445555555433
No 218
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=53.86 E-value=35 Score=27.99 Aligned_cols=53 Identities=11% Similarity=0.066 Sum_probs=44.5
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SDl-~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.+.+|+.|.+.+- -+++--.+.|++.||.++..-.++.-+-+++.+.++...+
T Consensus 55 ~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~ 108 (303)
T 4b4u_A 55 ILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNA 108 (303)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcC
Confidence 5889999987664 4566777899999999999999999999999999976643
No 219
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=53.72 E-value=39 Score=27.44 Aligned_cols=51 Identities=16% Similarity=0.281 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-.+.|+++||.. + ..|-+..=+++++.++++.+.++|++||+=
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 89 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLD 89 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57887777778999999841 2 245555557899999999999999999974
No 220
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=53.35 E-value=48 Score=27.00 Aligned_cols=59 Identities=17% Similarity=0.102 Sum_probs=40.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
...|.|+..++.-+..+.+.+..|.+-||.+++- ++.-..+.+-+++|...|+..+|.+
T Consensus 366 ~~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 424 (464)
T 4g84_A 366 ETQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 424 (464)
T ss_dssp CCCEEEECSSSSCHHHHHHHHHHHHHTTCCEECC----SCSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 3568888888888999999999999999998763 2222233334455556677654443
No 221
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=53.29 E-value=43 Score=29.77 Aligned_cols=86 Identities=6% Similarity=0.005 Sum_probs=59.7
Q ss_pred eecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec--cCCCHHHHHHHHHHHHHhCCCeeEEEEc----
Q 032873 21 VLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME--SDLDLPVMNDAARTLSDFGVPYEIKILP---- 94 (131)
Q Consensus 21 Vt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG--S~SDl~~~~ka~~~L~~fGI~~ev~V~S---- 94 (131)
+.+++..+|-++|..|...-.. + + . --.+.-.. +..|.+.+.+.++-+++.|||+++-++.
T Consensus 138 ~~G~~p~~v~~~Y~~ltG~~~l----------p-P-~-walG~~qsr~~Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~ 204 (666)
T 3nsx_A 138 IEGENAYDIVKQFRRVIGRSYI----------P-P-K-FAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYM 204 (666)
T ss_dssp EECSSHHHHHHHHHHHHCCCCC----------C-C-G-GGGSEEEEETTCCSHHHHHHHHHHHHHTTCCCCEEEECGGGS
T ss_pred EcCCCHHHHHHHHHHhhCcccC----------C-c-c-ccccccccccccCCHHHHHHHHHHHHhcCCCcceEEEecHHH
Confidence 4566778888888877633211 1 0 1 11233222 4668888899999999999999998887
Q ss_pred ---------CCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 95 ---------PHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 95 ---------AHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|-|+ ..+++++.+++|.++++-+
T Consensus 205 ~~~~~ft~d~~~FPd-p~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 205 QDFKDFTVNEKNFPD-FPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp STTCTTCCCTTTCTT-HHHHHHHHHTTTCEEEEEE
T ss_pred HhhcccccChhhCCC-HHHHHHHHHHcCceEEeee
Confidence 346675 7788888889999887643
No 222
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=53.17 E-value=57 Score=23.64 Aligned_cols=63 Identities=16% Similarity=0.237 Sum_probs=38.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH---------------------h-hCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA---------------------K-ERGI 114 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~---------------------~-~~g~ 114 (131)
...+.++|+|..+- +...+++.|-+-|. .+.+ .-|.++++.+..+.. + ..++
T Consensus 12 ~~~k~vlVTGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGASSG--IGSAIARLLHKLGS--KVII--SGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCCCh--HHHHHHHHHHHCCC--EEEE--EcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 34679999999884 56677777777774 3333 345666555443221 1 1357
Q ss_pred eEEEEecCcCC
Q 032873 115 KIIIVGDGVEA 125 (131)
Q Consensus 115 ~ViIA~AG~aA 125 (131)
+++|-.||...
T Consensus 86 d~li~~Ag~~~ 96 (249)
T 3f9i_A 86 DILVCNAGITS 96 (249)
T ss_dssp SEEEECCC---
T ss_pred CEEEECCCCCC
Confidence 88888888643
No 223
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=53.05 E-value=69 Score=23.96 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=40.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-----------------------ChHHHHHHHHHHhh--CC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-----------------------NCKEALSYALSAKE--RG 113 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR-----------------------tp~~~~~~~~~~~~--~g 113 (131)
.++++|+|..+.--+...+++.|-+-|. .+.+++-.+ .++.+.++++...+ ..
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 5799999977664456677777777774 344443222 34455555544432 35
Q ss_pred CeEEEEecCcCC
Q 032873 114 IKIIIVGDGVEA 125 (131)
Q Consensus 114 ~~ViIA~AG~aA 125 (131)
++++|-.||...
T Consensus 104 id~li~nAg~~~ 115 (280)
T 3nrc_A 104 LDAIVHSIAFAP 115 (280)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCccCC
Confidence 799999998754
No 224
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=52.79 E-value=29 Score=25.65 Aligned_cols=47 Identities=11% Similarity=0.184 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
..++++.+.++.+|+++-+-....+.....+.++++.+++.|+++.|
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~l 130 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLV 130 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEE
Confidence 45556666666666665433333333333445555555555554443
No 225
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=52.69 E-value=21 Score=27.04 Aligned_cols=55 Identities=16% Similarity=0.158 Sum_probs=32.7
Q ss_pred CeEEEEeccCCCH-----HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL-----PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl-----~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+|++|+.|+. ...+.+.+.|++.| |++..+.....+..+.+ ...+++++.+.
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g--~~v~~i~~~~~~~~~~~------~~~~D~v~~~~ 63 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNK--YEIVPITLNEKMDLIEK------AKDIDFALLAL 63 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTT--EEEEEEECSSGGGHHHH------TTTCSEEEECC
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCC--CEEEEEcccCchhHHHh------ccCCCEEEEeC
Confidence 4799999998864 33455556666666 56666666544333221 13466665543
No 226
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=52.64 E-value=34 Score=28.02 Aligned_cols=51 Identities=24% Similarity=0.171 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHHhCCCee--------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~e--------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.=+.+-...|+++||..- ..|-+.-=+++++.++++.+.++|++||+=
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD 99 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMD 99 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 477766666788999999521 233333447899999999999999999974
No 227
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=52.37 E-value=18 Score=28.10 Aligned_cols=44 Identities=9% Similarity=0.112 Sum_probs=37.8
Q ss_pred HHHHHHhCCCeeEEEEcCCCCh-HHHHHHHHHHhhCCCeEEEEec
Q 032873 78 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 78 ~~~L~~fGI~~ev~V~SAHRtp-~~~~~~~~~~~~~g~~ViIA~A 121 (131)
...|+.+|+.+-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999998875 5788888889999999999873
No 228
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=51.99 E-value=35 Score=24.94 Aligned_cols=41 Identities=15% Similarity=0.158 Sum_probs=28.8
Q ss_pred CCCeEEEEecc----------CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 032873 57 DAPIVGIIMES----------DLDLPVMNDAARTLSDFGVPYEIKILPPHQNC 99 (131)
Q Consensus 57 ~~~~V~IimGS----------~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp 99 (131)
+..+|+|++.| ..++.-+-...++|++-| |+++++|.+..|
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag--~~v~~vs~~~~~ 54 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG--YDVKVASIQGGE 54 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT--CEEEEEESSCBC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC--CeEEEECCCCCc
Confidence 43589999984 334445555667777766 799999988754
No 229
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=51.50 E-value=31 Score=24.91 Aligned_cols=60 Identities=7% Similarity=0.012 Sum_probs=32.7
Q ss_pred EEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 61 VGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 61 V~IimGS~SDl---~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
|++++-+.++- ...+.+.+.+++.|. ++.+......+++..++++....++++.+|....
T Consensus 2 Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 64 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASY 64 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecC
Confidence 67777654442 345566667777884 5666666666666666666666677877776543
No 230
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=51.33 E-value=36 Score=27.83 Aligned_cols=52 Identities=19% Similarity=0.220 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
-|+.-+.+-.+.|+++||.. + ..|-+..=+++++.++++.+.++|++||+=+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 47777777778999999952 1 2344444578999999999999999999743
No 231
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=51.32 E-value=66 Score=24.13 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=47.0
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChHHHHHHHHHHh--hCCCeEEEEe
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAK--ERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~----ev~V~SAHRtp~~~~~~~~~~~--~~g~~ViIA~ 120 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|+.- .++|-+|--.|--..++++... ...++.+||.
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaL 87 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPI 87 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEe
Confidence 5899999998888 77888999999999862 2456677777776666665322 4568988885
No 232
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=51.08 E-value=31 Score=29.00 Aligned_cols=55 Identities=15% Similarity=0.231 Sum_probs=45.3
Q ss_pred CeEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMES---DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS---~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..++||+|+ ..-+..++...+.|++-|.++.+-+.+ .=+|+++..| . +++||-+|
T Consensus 265 ~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk~y~i~vg-~inp~KLanF-~------iD~fV~va 322 (378)
T 3lzd_A 265 KKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMN-DVNYHKLEGF-P------FEAYVVVA 322 (378)
T ss_dssp CEEEEEEECSTTTCCHHHHHHHHHHHHHTTCEEEEEEES-SCCHHHHTTS-C------CSEEEECS
T ss_pred CEEEEEEeCCccCCCHHHHHHHHHHHHHcCCcEEEEEeC-CCCHHHHhCC-C------CCEEEEec
Confidence 579999988 567889999999999999998877775 7789999877 2 77777665
No 233
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=50.94 E-value=30 Score=23.64 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcC-CCChHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPP-HQNCKEALSYAL 107 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SA-HRtp~~~~~~~~ 107 (131)
+.=+.|++|.+.|++.||+|++.=+.- .-+.+++.++.+
T Consensus 8 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~ 47 (120)
T 3l78_A 8 PSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILS 47 (120)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHh
Confidence 446799999999999999998765543 456677777765
No 234
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=50.90 E-value=47 Score=24.86 Aligned_cols=67 Identities=10% Similarity=0.045 Sum_probs=42.5
Q ss_pred CCCeEEEEeccCC------CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 57 DAPIVGIIMESDL------DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 57 ~~~~V~IimGS~S------Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
..++|+||.=|+. |- -..-....|+++|.......+ .--.++.+.+-++.+-..+++++|.-.|.+.
T Consensus 29 ~~~rvaIistGdEl~~G~~Ds-n~~~L~~~L~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~DlVIttGGts~ 101 (185)
T 3rfq_A 29 VVGRALVVVVDDRTAHGDEDH-SGPLVTELLTEAGFVVDGVVA-VEADEVDIRNALNTAVIGGVDLVVSVGGTGV 101 (185)
T ss_dssp CCEEEEEEEECHHHHTTCCCS-HHHHHHHHHHHTTEEEEEEEE-ECSCHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCCEEEEEEECcccCCCCcCc-HHHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4478999975542 22 234456778999976543322 2345666766666654456899998888764
No 235
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=50.62 E-value=42 Score=28.65 Aligned_cols=50 Identities=20% Similarity=0.300 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHHhCCCee-------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 70 DLPVMNDAARTLSDFGVPYE-------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~e-------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
|+.-+.+-...|+++||..- ..|-+..=+++++.++++.+.++|++||+=
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 242 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLD 242 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 77766666799999999521 345555567899999999999999999974
No 236
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=50.21 E-value=50 Score=24.41 Aligned_cols=60 Identities=18% Similarity=0.105 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~----ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|+.. .++|-+|--.|--..++++ ..+++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 79 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE---TKKYDAIITLG 79 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 5799999998888 77888999999999873 3567777777766655554 45689888853
No 237
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=50.04 E-value=42 Score=28.64 Aligned_cols=50 Identities=30% Similarity=0.320 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHhCCCee-------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 70 DLPVMNDAARTLSDFGVPYE-------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~e-------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
|+.-+.+-...|+++||..- ..|-+..=+++++.++++.+.++|++||+=
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD 239 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 239 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 67666555799999999521 345555567999999999999999999974
No 238
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=49.93 E-value=43 Score=30.95 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=57.9
Q ss_pred eecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec--cCCCHHHHHHHHHHHHHhCCCeeEEEEc----
Q 032873 21 VLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME--SDLDLPVMNDAARTLSDFGVPYEIKILP---- 94 (131)
Q Consensus 21 Vt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG--S~SDl~~~~ka~~~L~~fGI~~ev~V~S---- 94 (131)
+.+++.++|-++|..|...-.. + + . .-.+.-.. +..+.+.+.+..+-+++.|||+|+.++-
T Consensus 265 ~~Gptp~~Vv~~Y~~ltG~p~l----------p-P-~-WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~ 331 (875)
T 3l4y_A 265 FLGNTPEQVVQEYLELIGRPAL----------P-S-Y-WALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYM 331 (875)
T ss_dssp EEESSHHHHHHHHHHHHCCCCC----------C-C-G-GGGSEEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGS
T ss_pred EeCCCHHHHHHHHHHHhCCCCC----------C-C-c-cccccceeccCCCCHHHHHHHHHHHHhcCCCCceEEEccchh
Confidence 3456778888888777633211 1 0 0 01222221 3457788889999999999999998874
Q ss_pred ---------CCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 95 ---------PHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 95 ---------AHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|-|+ ..++++...++|.++++-+
T Consensus 332 ~~~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 332 DERRDFTYDSVDFKG-FPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp BTTBTTCCCTTTTTT-HHHHHHHHHHTTCEEEEEE
T ss_pred cCCCceeeChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 346775 7788888889999888743
No 239
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=49.84 E-value=44 Score=27.39 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------e--------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------E--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------e--------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. + ..|-+..=+++++.++++.+.++|++||+=
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 117 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVD 117 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57777777778888999842 1 123333446899999999999999999974
No 240
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=49.54 E-value=33 Score=25.05 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+.+.+++..+.+.++|.|+.+..-.+ ++++.++++.......++++...|
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~---~~~~~~~l~~~p~~~~~~i~H~~~ 156 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREA---TQDCIDILLEEHAEEVGGIMHSFS 156 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC---HHHHHHHHHHTTGGGTCEEETTCC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeccc---HHHHHHHHHhcCCCCCcEEEEcCC
Confidence 45678889999999999999988754 577888876554223577655443
No 241
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=49.49 E-value=65 Score=24.59 Aligned_cols=59 Identities=8% Similarity=0.024 Sum_probs=42.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh--------------CCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--------------RGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~--------------~g~~ViIA~AG~aA 125 (131)
+.++|.|. . ...+.++..|.+.| +++.|. .|++++..++++.... .+++++|..+|...
T Consensus 120 ~~vlvlGa-G--g~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 120 QHVLILGA-G--GATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CEEEEECC-S--HHHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CEEEEECC-c--HHHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 45677787 3 57888888999999 577765 7999999888755321 26788888887544
No 242
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=49.39 E-value=75 Score=23.32 Aligned_cols=60 Identities=18% Similarity=0.305 Sum_probs=42.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCC-----------------------eeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVP-----------------------YEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~-----------------------~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
+++.=|+-|..--.+-.+-+++-|+. .++-|+-..-.-+....|+++++++|..||+
T Consensus 29 vvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 29 VVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp EEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 34555677776666666666666663 3455555566677888999999999999998
Q ss_pred Eec
Q 032873 119 VGD 121 (131)
Q Consensus 119 A~A 121 (131)
.-.
T Consensus 109 vyn 111 (162)
T 2l82_A 109 VYN 111 (162)
T ss_dssp EEE
T ss_pred Eec
Confidence 754
No 243
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=49.33 E-value=87 Score=24.00 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=43.2
Q ss_pred eEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEE--cCCCChHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 60 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKIL--PPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 60 ~V~IimGS~SD--l~~~~ka~~~L~~fGI~~ev~V~--SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
+|++|.|..+. ..-.+--.+.|++.|.++++.+. +..-.|+.-.+.++..-++|+++|++.++..
T Consensus 131 ~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~d~~ 199 (318)
T 2fqx_A 131 AVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGT 199 (318)
T ss_dssp EEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred EEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 89999886432 22233445677888987765543 2334577777776655566899999998864
No 244
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.32 E-value=76 Score=23.37 Aligned_cols=26 Identities=19% Similarity=0.105 Sum_probs=16.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~k~vlVTGas~--gIG~aia~~l~~~G~ 31 (257)
T 3imf_A 6 EKVVIITGGSS--GMGKGMATRFAKEGA 31 (257)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46778888776 345555566655553
No 245
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=49.19 E-value=11 Score=31.11 Aligned_cols=63 Identities=8% Similarity=-0.026 Sum_probs=41.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE-EEEcCCCChHHHHHHHHHHhhCC---CeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERG---IKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev-~V~SAHRtp~~~~~~~~~~~~~g---~~ViIA~AG~aA 125 (131)
++.||++..--. ....+.|+.-|+.+.+ .-...+.+.+.+.+.++.+.+.+ +++|||+-|+|.
T Consensus 55 ~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~ 121 (375)
T 3rf7_A 55 FVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGST 121 (375)
T ss_dssp CEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHH
T ss_pred eEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 576777643211 1234445545777642 22357788888888888777777 999999999874
No 246
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=48.32 E-value=32 Score=28.37 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
-|+.-+.+-.+.|+++||.. + ..|-+.-=+.+++.++++++.++|++||+=+
T Consensus 53 Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 53 GDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 57777777788999999952 1 2333333468899999999999999999743
No 247
>2d0o_B DIOL dehydratase-reactivating factor small subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.51.3.2 PDB: 2d0p_B
Probab=48.09 E-value=49 Score=23.85 Aligned_cols=60 Identities=20% Similarity=0.351 Sum_probs=42.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHH-HHHhhCCCeEEEEecC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA-LSAKERGIKIIIVGDG 122 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~-~~~~~~g~~ViIA~AG 122 (131)
.|-|.|......+ .+.+++..-+++=||||.+++.. .......+ +.+...+..|=|++.+
T Consensus 7 kPaI~i~~~~~~~-~~l~evl~GIEEEGip~~v~~~~----~~d~~~lA~~AA~~S~LgVGIGi~~ 67 (125)
T 2d0o_B 7 APAIAIAVIDGCD-GLWREVLLGIEEEGIPFRLQHHP----AGEVVDSAWQAARSSPLLVGIACDR 67 (125)
T ss_dssp CCCEEEEEETTCG-GGGHHHHHHHHHTTCCEEEEEES----SCCHHHHHHHHHHTCTTSEEEEECS
T ss_pred CCEEEEEeCCCcH-HHHHHHHhhhcccCCCeEEEecC----CCCHHHHHHHHHHhCCCceeEEECC
Confidence 3567777755444 78999999999999999988742 24455555 3444566788888764
No 248
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=47.95 E-value=41 Score=26.66 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=42.4
Q ss_pred eEEEEeccCCCHH--------------HHHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLP--------------VMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~--------------~~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~Vi 117 (131)
.|. +..|.||.- .++++.+.+++.|..+.+..--++|+ |+.+.++++.+.+-|++.|
T Consensus 96 ~v~-i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i 167 (293)
T 3ewb_X 96 QIH-IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVI 167 (293)
T ss_dssp EEE-EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEE
T ss_pred EEE-EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 455 456888864 36677788889999888777767765 5667889988888888753
No 249
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=47.84 E-value=74 Score=22.75 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
.|.+-+++|....+.+|-..-+- -.-..-.++++|..+...+|+.|=
T Consensus 59 ddkewaekairfvkslgaqvlii--iydqdqnrleefsrevrrrgfevr 105 (134)
T 2l69_A 59 DDKEWAEKAIRFVKSLGAQVLII--IYDQDQNRLEEFSREVRRRGFEVR 105 (134)
T ss_dssp SSHHHHHHHHHHHHHHCCCCEEE--EECSCHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHHHHHhcCCeEEEE--EEeCchhHHHHHHHHHHhcCceEE
Confidence 68999999999999999865443 356788999999999999998774
No 250
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=47.82 E-value=83 Score=23.68 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=42.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
..|+||.-.+.....++...+.+++.|+....... .-.........++..+..+.++||...
T Consensus 131 ~~vaii~~~d~~~~~~~~~~~~~~~~g~~v~~~~~-~~~~~~d~~~~l~~i~~~~~~vIv~~~ 192 (389)
T 4gpa_A 131 NCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICV-ENFNDVSYRQLLEELDRRQEKKFVIDC 192 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHTTTCEEEEEEC-TTCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cEEEEEEecchhhHHHHHHHHHHHhcCceEEEEee-cCCcchhHHHHHHHhhccCCcEEEEEe
Confidence 46899987777777778888888888887655443 333444555666666666777777654
No 251
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=47.76 E-value=38 Score=23.49 Aligned_cols=38 Identities=8% Similarity=0.029 Sum_probs=30.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN 98 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt 98 (131)
.+|+|+.....+..-+-...+.|+.-| |+++++|.+..
T Consensus 3 ~ki~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (168)
T 3l18_A 3 MKVLFLSADGFEDLELIYPLHRIKEEG--HEVYVASFQRG 40 (168)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT--CEEEEEESSSE
T ss_pred cEEEEEeCCCccHHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 479999999888888888888998876 68888887654
No 252
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=47.67 E-value=16 Score=23.67 Aligned_cols=45 Identities=18% Similarity=0.110 Sum_probs=30.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHH
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 106 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~ 106 (131)
..|.+...+ .=|.|+++...|++.|++|+..=+... .++...++.
T Consensus 22 ~~v~ly~~~--~Cp~C~~ak~~L~~~~i~y~~vdI~~~-~~~~~~~~~ 66 (103)
T 3nzn_A 22 GKVIMYGLS--TCVWCKKTKKLLTDLGVDFDYVYVDRL-EGKEEEEAV 66 (103)
T ss_dssp SCEEEEECS--SCHHHHHHHHHHHHHTBCEEEEEGGGC-CHHHHHHHH
T ss_pred CeEEEEcCC--CCchHHHHHHHHHHcCCCcEEEEeecc-CcccHHHHH
Confidence 356665443 449999999999999999987655432 244444443
No 253
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=47.51 E-value=9.3 Score=25.09 Aligned_cols=45 Identities=16% Similarity=0.242 Sum_probs=34.6
Q ss_pred EeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH
Q 032873 64 IMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 109 (131)
Q Consensus 64 imGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~ 109 (131)
=.|-+| +..++=...+=++|||.....-..-++|+..+.+|+...
T Consensus 36 dlG~DS-L~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 80 (95)
T 1nq4_A 36 ALGYDS-LALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp HHTCCS-HHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred hhCCCH-HHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHH
Confidence 356555 677777777777899988766666899999999999543
No 254
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=47.13 E-value=64 Score=23.23 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=43.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|.||-=++...+.++++...|+..|+..|+... |+-+++-.-+.++..+++-.+|.+
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVV 67 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVI 67 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEE
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEE
Confidence 35777777899999999999999999999988532 223555555666666666555544
No 255
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=46.93 E-value=59 Score=28.93 Aligned_cols=86 Identities=9% Similarity=-0.021 Sum_probs=58.6
Q ss_pred eecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEE--eccCCCHHHHHHHHHHHHHhCCCeeEEEEc----
Q 032873 21 VLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGII--MESDLDLPVMNDAARTLSDFGVPYEIKILP---- 94 (131)
Q Consensus 21 Vt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~Ii--mGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---- 94 (131)
+.+++..++-++|..+...-. .+ + . .-.+.- .-+.-|.+.+.+.++-+++.|||+++-++-
T Consensus 150 ~~G~~~~~v~~~Y~~ltG~p~----------~p-P-~-WalG~~qsr~~y~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~ 216 (693)
T 2g3m_A 150 IEGPRIEDVLEKYTELTGKPF----------LP-P-M-WAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYM 216 (693)
T ss_dssp EECSSHHHHHHHHHHHHCCCC----------CC-C-G-GGGSEEEEETTCCSHHHHHHHHHHHHHTTCCEEEEEECGGGS
T ss_pred EeCCCHHHHHHHHHHHhCCCC----------CC-c-c-cccCccccCCcCCCHHHHHHHHHHHHHcCCCcceEEEeccee
Confidence 356788888888887763221 11 1 1 001221 113457888888899999999999998885
Q ss_pred ---------CCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 95 ---------PHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 95 ---------AHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|-|+ ..+++++..++|.++++-+
T Consensus 217 ~~~~dft~d~~~FPd-p~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 217 DSYKLFTWHPYRFPE-PKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp BTTBTTCCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred cCCccceEChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 356676 5778888889999888754
No 256
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=46.83 E-value=85 Score=23.17 Aligned_cols=26 Identities=8% Similarity=0.072 Sum_probs=17.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|.
T Consensus 7 ~k~vlVTGas~G--IG~aia~~l~~~G~ 32 (252)
T 3h7a_A 7 NATVAVIGAGDY--IGAEIAKKFAAEGF 32 (252)
T ss_dssp SCEEEEECCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC
Confidence 468888888774 45566666666664
No 257
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=46.71 E-value=44 Score=27.30 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=43.6
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.++.|+.|.+.+ .-+++.-.+.|+++||.++..-.++--+-+++.+.++...+
T Consensus 37 ~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 90 (301)
T 1a4i_A 37 RLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNE 90 (301)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 588889997755 44566677889999999999999999999999999976643
No 258
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=46.45 E-value=54 Score=23.50 Aligned_cols=50 Identities=8% Similarity=-0.130 Sum_probs=29.2
Q ss_pred eEEEEeccCC----CHHHHHHHHHH-HHHhCCCeeEEEEcCCCC-----------hHHHHHHHHHHhh
Q 032873 60 IVGIIMESDL----DLPVMNDAART-LSDFGVPYEIKILPPHQN-----------CKEALSYALSAKE 111 (131)
Q Consensus 60 ~V~IimGS~S----Dl~~~~ka~~~-L~~fGI~~ev~V~SAHRt-----------p~~~~~~~~~~~~ 111 (131)
+|.||.||.. =...++.+++. |++-|. ++.++..... |+.+.++.+...+
T Consensus 4 kilii~gS~r~~g~t~~la~~i~~~~l~~~g~--~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~ 69 (197)
T 2vzf_A 4 SIVAISGSPSRNSTTAKLAEYALAHVLARSDS--QGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCN 69 (197)
T ss_dssp EEEEEECCSSTTCHHHHHHHHHHHHHHHHSSE--EEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHHCCC--eEEEEEccccCchhhcccccCcHHHHHHHHHHHH
Confidence 7999999963 34455555566 666575 4444444333 3456666655544
No 259
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.31 E-value=89 Score=23.26 Aligned_cols=26 Identities=19% Similarity=0.045 Sum_probs=15.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 15 gk~~lVTGas~--gIG~a~a~~la~~G~ 40 (280)
T 3pgx_A 15 GRVAFITGAAR--GQGRSHAVRLAAEGA 40 (280)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 56888888776 334455555555553
No 260
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=46.19 E-value=60 Score=23.04 Aligned_cols=60 Identities=10% Similarity=0.088 Sum_probs=42.7
Q ss_pred EEEeccCCCHHHHHHHHHHH------HHhCCCee-----------------------------------EEEEcCCCChH
Q 032873 62 GIIMESDLDLPVMNDAARTL------SDFGVPYE-----------------------------------IKILPPHQNCK 100 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L------~~fGI~~e-----------------------------------v~V~SAHRtp~ 100 (131)
.++.|.-+-...++.....| ...|+++. +-++|.-+...
T Consensus 48 I~i~G~G~S~~~A~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~ 127 (199)
T 1x92_A 48 ILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSA 127 (199)
T ss_dssp EEEECSTHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEECSSSCCH
T ss_pred EEEEcCchhHHHHHHHHHHHhcCcccCCCCCceEecCCChhHHHHhhcCccHHHHHHHHHHhCCCCCCEEEEEeCCCCCH
Confidence 34567666667777777777 44555431 56788888889
Q ss_pred HHHHHHHHHhhCCCeEEEEecC
Q 032873 101 EALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 101 ~~~~~~~~~~~~g~~ViIA~AG 122 (131)
++.+.++.++++|+++| ++.+
T Consensus 128 ~~i~~~~~ak~~g~~vI-~IT~ 148 (199)
T 1x92_A 128 NVIQAIQAAHDREMLVV-ALTG 148 (199)
T ss_dssp HHHHHHHHHHHTTCEEE-EEEC
T ss_pred HHHHHHHHHHHCCCEEE-EEEC
Confidence 99999999999998764 4444
No 261
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=46.08 E-value=44 Score=28.83 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHhCCCee-------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 70 DLPVMNDAARTLSDFGVPYE-------------------IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~e-------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
|+.=+.+=...|+++||..- ..|-+.-=+++++.++++.+.++|++||+=+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 67666666789999999521 2344445589999999999999999999743
No 262
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=45.83 E-value=34 Score=22.08 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=23.0
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCeeE
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYEI 90 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~ev 90 (131)
.||+.++-|-...++....|++.+|||..
T Consensus 30 lViiA~D~~~~~~~~i~~lc~~~~Ip~~~ 58 (82)
T 3v7e_A 30 EVVVAKDADPILTSSVVSLAEDQGISVSM 58 (82)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 34555566668999999999999999865
No 263
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=45.61 E-value=21 Score=25.16 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHH
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~ 107 (131)
++++.+.|++.||+|+..-...-+|-++..++..
T Consensus 4 ~~~v~~~L~~~~i~~~~~~~~~~~t~~~~a~~lg 37 (152)
T 3op6_A 4 VKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAH 37 (152)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTCCHHHHC----
T ss_pred HHHHHHHHHHcCCceEEEEcCCCCCHHHHHHHcC
Confidence 4689999999999999765556666666655543
No 264
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=45.14 E-value=58 Score=23.87 Aligned_cols=46 Identities=15% Similarity=0.023 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
.++..++++.+.++.+|.++-+. |-..+.+.++.+.+++.|+++.|
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~----~p~~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVG----VPNYELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEE----EECGGGHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEe----cCCHHHHHHHHHHHHHcCCEEEE
Confidence 57888888888888888886542 22346677777777777777654
No 265
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.10 E-value=23 Score=23.55 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=31.0
Q ss_pred eEEEEeccCCCHHHHH------HHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHH
Q 032873 60 IVGIIMESDLDLPVMN------DAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~------ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~ 108 (131)
.|.|.+- +.=+.|+ ++.+.|++.||+|+..=+.. .|+...++.+.
T Consensus 9 ~V~vy~~--~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~ 59 (111)
T 2ct6_A 9 VIRVFIA--SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN 59 (111)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHS
T ss_pred EEEEEEc--CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHH
Confidence 4666653 4456777 89999999999998766654 46555555543
No 266
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=44.99 E-value=22 Score=20.74 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHH
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA 102 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~ 102 (131)
.=+.|+++...|+++|++|+..=+. ..++..
T Consensus 10 ~C~~C~~~~~~l~~~~i~~~~~di~--~~~~~~ 40 (75)
T 1r7h_A 10 ACVQCTATKKALDRAGLAYNTVDIS--LDDEAR 40 (75)
T ss_dssp TCHHHHHHHHHHHHTTCCCEEEETT--TCHHHH
T ss_pred CChHHHHHHHHHHHcCCCcEEEECC--CCHHHH
Confidence 3489999999999999998765433 445433
No 267
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=44.84 E-value=52 Score=24.32 Aligned_cols=59 Identities=14% Similarity=0.047 Sum_probs=45.1
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~----ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|--.|--..++++ ..+++.+||.
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIal 78 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELAR---KEDIDAVIAI 78 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHT---CTTCCEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEe
Confidence 5799999998888 77888999999999873 3567677776765555543 4568988885
No 268
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=44.73 E-value=43 Score=27.45 Aligned_cols=51 Identities=24% Similarity=0.253 Sum_probs=39.2
Q ss_pred CCHHHHHHHHHHHHHhCCCe-----------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-----------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-----------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-.+.|+++||.. + ..|-+..=+++.+.++++.+.++|++||+=
T Consensus 33 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD 101 (424)
T 2dh2_A 33 GNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILD 101 (424)
T ss_dssp CSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57777777778888888842 1 244445567899999999999999999974
No 269
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=44.69 E-value=25 Score=28.09 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=33.3
Q ss_pred HHHHHHHhCCCe-eEEEE----cCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 77 AARTLSDFGVPY-EIKIL----PPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 77 a~~~L~~fGI~~-ev~V~----SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..++|+++|+++ .+||- .-+-..+++.++++.+++.|++|++-.
T Consensus 32 ~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 32 LETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 468899999984 35543 223456888888999999999999974
No 270
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=44.64 E-value=36 Score=25.38 Aligned_cols=37 Identities=8% Similarity=0.106 Sum_probs=25.9
Q ss_pred CeEEEEeccCCC-H----HHHHHHHHHHHHhCCCeeEEEEcCCC
Q 032873 59 PIVGIIMESDLD-L----PVMNDAARTLSDFGVPYEIKILPPHQ 97 (131)
Q Consensus 59 ~~V~IimGS~SD-l----~~~~ka~~~L~~fGI~~ev~V~SAHR 97 (131)
.+|+|++|+.|. . ...+...+.|++.|+. +.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~--v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGID--AYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCE--EEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCe--EEEEecCc
Confidence 479999999874 2 2456788889999974 45555443
No 271
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=44.57 E-value=37 Score=26.76 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=41.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCC---CeeEEE-----EcCCCChHHHHHHHH-HHhhCCCeEEEEecCcCCcCcC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGV---PYEIKI-----LPPHQNCKEALSYAL-SAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI---~~ev~V-----~SAHRtp~~~~~~~~-~~~~~g~~ViIA~AG~aAhLpG 129 (131)
+++|++=|.+|++. +.++++|| |..+.+ .+.-=+|.++.++.+ ..++.|++=+|++ ..|.+|+|
T Consensus 5 ki~IvtDSt~dL~~-----e~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~f~~~~~~~~~d~Ii~I-~iSs~LSG 77 (277)
T 3egl_A 5 PVRVIVDSSACLPT-----HVAEDLDITVINLHVMNNGEERSTSGLSSLELAASYARQLERGGDDGVLAL-HISXELSS 77 (277)
T ss_dssp CCEEEEEGGGCCCH-----HHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHHHHHTTTSCEEEE-CSCTTTCS
T ss_pred cEEEEEECCCCCCH-----HHHHHCCeEEEEEEEEECCcccccCCcCHHHHHHHHHHHHHhCCCCcEEEE-EeCcchhh
Confidence 59999999999984 45678887 444433 445678888888764 4444455433333 34555555
No 272
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=44.54 E-value=97 Score=23.17 Aligned_cols=65 Identities=9% Similarity=0.080 Sum_probs=39.5
Q ss_pred CeEEEEeccCCCHH------HHHHHHHHHHHhCCC---eeEEEEcCCCChHHHHHHHHHHhhC-CCeEEEEecCcCC
Q 032873 59 PIVGIIMESDLDLP------VMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEA 125 (131)
Q Consensus 59 ~~V~IimGS~SDl~------~~~ka~~~L~~fGI~---~ev~V~SAHRtp~~~~~~~~~~~~~-g~~ViIA~AG~aA 125 (131)
++|+||.=|+.=.+ ...-..+.|+++|.. ....++ --.++.+.+-++++.++ +++++|.-.|.+.
T Consensus 4 ~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV--~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~ 78 (195)
T 1di6_A 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLI--PDEQAIIEQTLCELVDEMSCHLVLTTGGTGP 78 (195)
T ss_dssp EEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEE--ESCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 57888875543221 123466788999986 234444 24456666666665553 6899998877654
No 273
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=44.52 E-value=50 Score=28.08 Aligned_cols=51 Identities=16% Similarity=0.224 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------EI-KILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. +. .|-+.-=+++++.++++.+.++|++||+=
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 112 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMID 112 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57887777778999999841 22 35555567899999999999999999974
No 274
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=44.42 E-value=26 Score=25.17 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~ 107 (131)
+.++++.-+|+..||+||...+.......+..+|.+
T Consensus 13 p~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 13 PPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 788999999999999999988776544444444543
No 275
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=44.32 E-value=1.1e+02 Score=23.55 Aligned_cols=52 Identities=21% Similarity=0.187 Sum_probs=33.8
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCC---------hHHHHHHHHHHhh
Q 032873 58 APIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQN---------CKEALSYALSAKE 111 (131)
Q Consensus 58 ~~~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~SAHRt---------p~~~~~~~~~~~~ 111 (131)
..+|.||.||..- ...++.+.+.|++-|+ ++.++..... |+.+.++.+...+
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~ 98 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIW 98 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 3589999999753 3445566667777776 4555555444 3567777766655
No 276
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=44.23 E-value=52 Score=28.06 Aligned_cols=50 Identities=26% Similarity=0.319 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHhCCCee-------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 70 DLPVMNDAARTLSDFGVPYE-------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~e-------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
|+.-+.+-...|+++||..- ..|-+..=+++++.++++.+.++|++||+=
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 238 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLD 238 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 77666556799999999632 122233347899999999999999999973
No 277
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=44.23 E-value=62 Score=27.34 Aligned_cols=51 Identities=12% Similarity=0.245 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. + ..|-+.-=+++++.++++.+.++|++||+=
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 99 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVD 99 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57777766678999999842 1 235555567999999999999999999874
No 278
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=44.14 E-value=63 Score=24.14 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 76 DAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 76 ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
++.+.+...|++++..+.......+ .+++.+++.+++.+|.+.-+...+.
T Consensus 77 ~~~~~~~~~~v~~~~~~~~~g~~~~---~i~~~a~~~~~DLiV~G~~g~~~~~ 126 (319)
T 3olq_A 77 QQARYYLEAGIQIDIKVIWHNRPYE---AIIEEVITDKHDLLIKMAHQHDKLG 126 (319)
T ss_dssp HHHHHHHHTTCCEEEEEEECSCHHH---HHHHHHHHHTCSEEEEEEBCC--CC
T ss_pred HHHHHHhhcCCeEEEEEEecCChHH---HHHHHHHhcCCCEEEEecCcCchhh
Confidence 3344445569999988873333333 3445555567888888776555443
No 279
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=44.02 E-value=1e+02 Score=23.36 Aligned_cols=65 Identities=8% Similarity=0.082 Sum_probs=39.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCChHHHHHHHHHHhh--C
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP------------------------PHQNCKEALSYALSAKE--R 112 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S------------------------AHRtp~~~~~~~~~~~~--~ 112 (131)
.++++|+|..|..-+...+++.|-+-|.. +.++. =-..++.+.++++...+ .
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 57999999887644556666666666643 22221 11234455555544432 3
Q ss_pred CCeEEEEecCcCC
Q 032873 113 GIKIIIVGDGVEA 125 (131)
Q Consensus 113 g~~ViIA~AG~aA 125 (131)
+++++|-.||...
T Consensus 109 ~iD~lVnnAG~~~ 121 (293)
T 3grk_A 109 KLDFLVHAIGFSD 121 (293)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 6899999998753
No 280
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=43.91 E-value=57 Score=23.68 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEE-cCC--------------------CChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKIL-PPH--------------------QNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~-SAH--------------------Rtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.|.+.+++-.+.++++|++ -+||- +.+ ..-+.+.++++.|.+.|+.|++..
T Consensus 39 ~~~~~~~~~l~~~k~~G~N-~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 39 RNKNRIEPEFKKLHDAGGN-SMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCC-EEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCc-EEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4677889999999999998 45651 111 123566778888999999999875
No 281
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=43.67 E-value=57 Score=23.81 Aligned_cols=39 Identities=8% Similarity=0.007 Sum_probs=32.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ 97 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR 97 (131)
+..+|+|+.....+..-+-...++|..-| |+++++|.+.
T Consensus 8 m~~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~g 46 (208)
T 3ot1_A 8 MSKRILVPVAHGSEEMETVIIVDTLVRAG--FQVTMAAVGD 46 (208)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred cCCeEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 55689999998888888888888998877 7899999873
No 282
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.48 E-value=97 Score=22.89 Aligned_cols=26 Identities=23% Similarity=0.153 Sum_probs=16.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+-+ ...+++.|-+-|.
T Consensus 11 ~k~vlVTGas~gI--G~aia~~l~~~G~ 36 (264)
T 3ucx_A 11 DKVVVISGVGPAL--GTTLARRCAEQGA 36 (264)
T ss_dssp TCEEEEESCCTTH--HHHHHHHHHHTTC
T ss_pred CcEEEEECCCcHH--HHHHHHHHHHCcC
Confidence 5788888887753 4455555555553
No 283
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=43.30 E-value=66 Score=29.83 Aligned_cols=85 Identities=12% Similarity=0.184 Sum_probs=56.8
Q ss_pred ecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec--cCCCHHHHHHHHHHHHHhCCCeeEEEEc-----
Q 032873 22 LASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME--SDLDLPVMNDAARTLSDFGVPYEIKILP----- 94 (131)
Q Consensus 22 t~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG--S~SDl~~~~ka~~~L~~fGI~~ev~V~S----- 94 (131)
.+++..++-++|..|...-.. + + . .-.+.-.. +..|.+.+.+.++-+++.|||+|+.++.
T Consensus 294 ~Gptp~~Vi~~Y~~LtG~p~l----------p-P-~-WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~ 360 (898)
T 3lpp_A 294 LGDTPEQVVQQYQQLVGLPAM----------P-A-Y-WNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYME 360 (898)
T ss_dssp EESSHHHHHHHHHHHHCCCCC----------C-C-G-GGGSCEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSS
T ss_pred eCCCHHHHHHHHHHHhCCCCc----------C-c-c-hhcCcceecccCCCHHHHHHHHHHHHHcCCCceeeEecccccc
Confidence 456777888888777533211 1 0 0 01121111 3457888999999999999999999874
Q ss_pred --------CCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 95 --------PHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 95 --------AHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|-| ...++++...++|.++++-+
T Consensus 361 ~~~dFt~D~~~FP-dp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 361 DKKDFTYDQVAFN-GLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp TTCTTCCCTTTTT-THHHHHHHHHHTTCEEEEEE
T ss_pred CCCcceEChhhCC-CHHHHHHHHHHCCCEEEEEe
Confidence 34666 56778888888999887754
No 284
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=42.83 E-value=48 Score=26.89 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=43.6
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
.+..|+.|.+.+ .-+++.-.+.|+++||.++..-.++.-+.+++.+.++...+
T Consensus 35 ~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 88 (288)
T 1b0a_A 35 GLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNA 88 (288)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 578888887654 45566778889999999999999999999999999976643
No 285
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=42.82 E-value=42 Score=28.39 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------EI-KILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------ev-~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
-|+.-+.+-...|+++||.. +. .|-+..=+.+++.++++.+.++|++||+=+
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57777766678889999841 22 244445578899999999999999999743
No 286
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=42.04 E-value=39 Score=23.93 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEc-CCCChHHHHHHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALS 108 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~S-AHRtp~~~~~~~~~ 108 (131)
+.=+.|++|.+.|++-||+|+..=+. -.-+.+++.++...
T Consensus 10 p~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~ 50 (141)
T 1s3c_A 10 PASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIAD 50 (141)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhcc
Confidence 55689999999999999999765554 34567777777754
No 287
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=41.82 E-value=69 Score=23.45 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC---hHHHHHHHHHHhhCCCeEEEEec
Q 032873 68 DLDLPVMNDAARTLSDFGVPYEIKILPPHQN---CKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 68 ~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt---p~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+=-|.++++..+.|++.|+.+++..+---.. -..+.+-++.+.+.++++||.+=
T Consensus 29 di~l~ia~~l~~~L~~~G~~V~v~ltR~d~~~~~~~~L~~R~~~An~~~aDlfISIH 85 (180)
T 3qay_A 29 QYNKSLAPVLADTFRKEGHKVDVIICPEKQFKTKNEEKSYKIPRVNSGGYDLLIELH 85 (180)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCSSCCSSTTHHHHHHHHHHHHSCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEECCCCCccccccCHHHHHHHHHhcCCCEEEEee
Confidence 3347888999999999997643333211100 12455666667778899999863
No 288
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=41.81 E-value=1e+02 Score=22.78 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=47.4
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhC-CC---ee-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 58 APIVGIIMESDLDL---PVMNDAARTLSDFG-VP---YE-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 58 ~~~V~IimGS~SDl---~~~~ka~~~L~~fG-I~---~e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..+|+|+.+.-.+. .-.+.|.+.|++.| ++ ++ ++|-.|.-.|--..++++ ...++.+||.
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaL 79 (156)
T 3nq4_A 12 DARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAK---SGKYDAVVAL 79 (156)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHH---HCSCSEEEEE
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHh---cCCCCEEEEe
Confidence 35899999998888 77789999999999 84 33 677788888877777764 4568888875
No 289
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=41.75 E-value=88 Score=22.78 Aligned_cols=47 Identities=9% Similarity=-0.036 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 68 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 68 ~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
..+.+.++++.+.++.+|+++-+- |-..+.+.++.+.+++.|+++.|
T Consensus 87 ~~~~~~~~~~i~~A~~lGa~~v~~----~~~~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 87 AEKSSDWEKMFKFAKAMDLEFITC----EPALSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp CSSTTHHHHHHHHHHHTTCSEEEE----CCCGGGHHHHHHHHHHHTCEEEE
T ss_pred CccHHHHHHHHHHHHHcCCCEEEe----cCCHHHHHHHHHHHHHhCCEEEE
Confidence 345677889999999999886443 33567777777888888877654
No 290
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=41.45 E-value=59 Score=23.71 Aligned_cols=46 Identities=7% Similarity=0.022 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
+.+.+++..+.++++|+|+.+... ..++++.++++...-.+.++++
T Consensus 109 q~~~~~~~~~~a~~~~~pv~iH~~---~~~~~~~~~l~~~~~p~~~~v~ 154 (265)
T 1yix_A 109 QQESFIHHIQIGRELNKPVIVHTR---DARADTLAILREEKVTDCGGVL 154 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE---SCHHHHHHHHHHTTGGGTCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEec---CchHHHHHHHHhcCCCCCCEEE
Confidence 356788888999999999998876 4577888887654223346654
No 291
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=41.45 E-value=88 Score=25.45 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=38.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|.|+.-++.....+.+.++.|.+-|+.+++... -+++.+..+ ++...|+..+|.+
T Consensus 333 ~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~v~~d~~--~~~~~~~~~---~a~~~g~~~~iii 389 (434)
T 1wu7_A 333 KSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIM--ERGLSAQLK---YASAIGADFAVIF 389 (434)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHHTTTCEEEECCS--CCCHHHHHH---HHHHTTCSEEEEE
T ss_pred CcEEEEEcChHHHHHHHHHHHHHHHCCCeEEEecC--CCCHHHHHH---HHHHCCCCEEEEE
Confidence 46776665567889999999999999998776432 245555444 4556777655544
No 292
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=41.30 E-value=97 Score=22.28 Aligned_cols=62 Identities=6% Similarity=-0.078 Sum_probs=40.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------CChHHHHHHHHHHhh----CCCeEEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKE----RGIKIIIV 119 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAH---------------Rtp~~~~~~~~~~~~----~g~~ViIA 119 (131)
.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++...+ .+++++|-
T Consensus 3 ~k~vlITGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKG--ALGSAILEFFKKNGY--TVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTS--HHHHHHHHHHHHTTE--EEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 47899999988 467778888877773 44444311 123455555544332 46899999
Q ss_pred ecCcC
Q 032873 120 GDGVE 124 (131)
Q Consensus 120 ~AG~a 124 (131)
.||..
T Consensus 79 ~Ag~~ 83 (236)
T 1ooe_A 79 VAGGW 83 (236)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99964
No 293
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=41.27 E-value=1.1e+02 Score=22.81 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=38.2
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD--l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|++|.|.... ....+...+.|+++|++++.... .+.+...+.++.... ++++|++...
T Consensus 141 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D 202 (302)
T 2qh8_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATA---LKSADVQSATQAIAE-KSDVIYALID 202 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEEC---SSGGGHHHHHHHHGG-GCSEEEECSC
T ss_pred cEEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEec---CChHHHHHHHHHHhc-cCCEEEECCc
Confidence 589999987532 23345667788899998764432 235566665555443 5788877643
No 294
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=41.18 E-value=38 Score=25.40 Aligned_cols=28 Identities=18% Similarity=0.191 Sum_probs=20.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.+|++|+|..|..-+...+++.|-+-|-
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga 33 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGA 33 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCC
Confidence 5789999976665666667777766664
No 295
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=41.13 E-value=37 Score=23.74 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcC
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPP 95 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SA 95 (131)
-+.+.++.-+|+..||+|+...+..
T Consensus 12 s~~~~~v~~~L~~~gi~~e~~~v~~ 36 (210)
T 3m3m_A 12 SGNCYKIKLMLNLLGLPYEWQAVDI 36 (210)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCcHHHHHHHHHHcCCCCEEEEecC
Confidence 3678999999999999999988876
No 296
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.11 E-value=39 Score=22.86 Aligned_cols=51 Identities=10% Similarity=0.247 Sum_probs=37.9
Q ss_pred eEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 60 IVGIIMES---DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 60 ~V~IimGS---~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+|.++.|+ +| -.+++..+.|++.|+++++.-++..-..+... ++++|+.+.
T Consensus 5 kIll~Cg~G~sTS--~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~---------~~Dvil~~p 58 (106)
T 1e2b_A 5 HIYLFSSAGMSTS--LLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQ---------NADVVLLGP 58 (106)
T ss_dssp EEEEECSSSTTTH--HHHHHHHHHHHHSCCSEEEEEECSSSTTHHHH---------HCSEEEECT
T ss_pred EEEEECCCchhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhhcc---------CCCEEEEcc
Confidence 57777763 45 57889999999999999998888777666432 157777654
No 297
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=41.02 E-value=70 Score=27.88 Aligned_cols=51 Identities=24% Similarity=0.252 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHHhCCC-------ee---------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVP-------YE---------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~-------~e---------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-.+.|+++||. ++ ..|-+.-=+.+++.++++.+.++|++||+=
T Consensus 49 Gdl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD 127 (686)
T 1qho_A 49 GDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVD 127 (686)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5788777777899999985 21 223333346889999999999999999973
No 298
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=40.81 E-value=54 Score=24.29 Aligned_cols=60 Identities=7% Similarity=-0.050 Sum_probs=45.8
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~----ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|--.|--..++++ ..+++.+||..
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 78 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAE---TGRYGAVLGTA 78 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---HTCCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 5799999998888 77888999999999975 2556667777766655554 45689888853
No 299
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=40.58 E-value=52 Score=28.72 Aligned_cols=51 Identities=24% Similarity=0.240 Sum_probs=37.4
Q ss_pred CCHHHHHHHHH--HHHHhCCC-------ee------------------------EEEEcCCCChHHHHHHHHHHhhCCCe
Q 032873 69 LDLPVMNDAAR--TLSDFGVP-------YE------------------------IKILPPHQNCKEALSYALSAKERGIK 115 (131)
Q Consensus 69 SDl~~~~ka~~--~L~~fGI~-------~e------------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ 115 (131)
-|+.-+.+-.+ .|+++||. ++ ..|-+..=+.+++.++++.+.++|++
T Consensus 52 Gdl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~ 131 (686)
T 1d3c_A 52 GDWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIK 131 (686)
T ss_dssp CCHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred cCHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 37777766677 88889984 22 22333334689999999999999999
Q ss_pred EEEE
Q 032873 116 IIIV 119 (131)
Q Consensus 116 ViIA 119 (131)
||+=
T Consensus 132 VilD 135 (686)
T 1d3c_A 132 VIID 135 (686)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9973
No 300
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=40.54 E-value=1.1e+02 Score=22.86 Aligned_cols=58 Identities=21% Similarity=0.187 Sum_probs=38.3
Q ss_pred EEEeccCCCHH---HHHHHHHHHHHhCCCeeEEEE--cCC----CChHHHHHHHHHHhhCCCeEEEE
Q 032873 62 GIIMESDLDLP---VMNDAARTLSDFGVPYEIKIL--PPH----QNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 62 ~IimGS~SDl~---~~~ka~~~L~~fGI~~ev~V~--SAH----Rtp~~~~~~~~~~~~~g~~ViIA 119 (131)
.+.+|+.++-. .++++.+.++++|+++.+.+. ..| .+++...+.++.+.+.|++.+..
T Consensus 119 ~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~ 185 (273)
T 2qjg_A 119 HVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKT 185 (273)
T ss_dssp EEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEE
Confidence 56688876643 456667777889999887642 123 45666666667777888885443
No 301
>1vki_A Hypothetical protein ATU3699; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.60A {Agrobacterium tumefaciens str} SCOP: d.116.1.1
Probab=40.53 E-value=24 Score=25.84 Aligned_cols=48 Identities=17% Similarity=0.095 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
...+++.+.|++.||+|+..-...-+|-++..++..-...+-+|-++.
T Consensus 19 ~~~~~~~~~L~~~~i~~~~~~~p~~~T~ee~a~~l~~~~~~~~KtLvl 66 (181)
T 1vki_A 19 KTATELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFV 66 (181)
T ss_dssp CCHHHHHHHHHHHTCCCEEEECCCCCSHHHHHHHHTTSCSEEEEEEEE
T ss_pred hHHHHHHHHHHHCCCCeEEEECCCCCCHHHHHHHcCCCccceeEEEEE
Confidence 345789999999999999876666677777777763322333344443
No 302
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=40.31 E-value=1.1e+02 Score=22.78 Aligned_cols=63 Identities=14% Similarity=0.116 Sum_probs=43.3
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCChHHHHHHHHHHh-hCCCeEEEEec
Q 032873 59 PIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SD-----l~~~~ka~~~L~~f-------GI~~ev~V~SAHRtp~~~~~~~~~~~-~~g~~ViIA~A 121 (131)
-+|+++.-.... .+..+-+...+++. |.++++.+......|++..+.++..- ++++..||...
T Consensus 5 i~IG~i~p~sg~~~~~~~~~~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~ 80 (358)
T 3hut_A 5 LLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDF 80 (358)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred EEEEEEeccCCchhhcCHHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCC
Confidence 368887764433 23333444445554 66899999999999999988887765 67788888643
No 303
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=40.23 E-value=75 Score=21.17 Aligned_cols=53 Identities=2% Similarity=0.068 Sum_probs=38.6
Q ss_pred eEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 60 IVGIIMES---DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS---~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
+|.++.|+ +| =.+++..+.+++.|+++++..+|.+..++. . .++++||...-.
T Consensus 6 kIlvvC~~G~~TS--ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~----~-----~~~D~Ii~t~~l 61 (109)
T 2l2q_A 6 NILLVCGAGMSTS--MLVQRIEKYAKSKNINATIEAIAETRLSEV----V-----DRFDVVLLAPQS 61 (109)
T ss_dssp EEEEESSSSCSSC--HHHHHHHHHHHHHTCSEEEEEECSTTHHHH----T-----TTCSEEEECSCC
T ss_pred EEEEECCChHhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhh----c-----CCCCEEEECCcc
Confidence 57777763 56 556799999999999999998888765543 1 246788776543
No 304
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=40.15 E-value=84 Score=21.20 Aligned_cols=57 Identities=9% Similarity=0.101 Sum_probs=43.4
Q ss_pred CeEEEEeccCCCHHH--HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcC
Q 032873 59 PIVGIIMESDLDLPV--MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (131)
Q Consensus 59 ~~V~IimGS~SDl~~--~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~a 124 (131)
.+|.+++|+--=-.. ..+..+.|++.|+++++..++....++. ..++++||...-..
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~---------~~~~DlIist~~l~ 80 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETY---------MDGVHLICTTARVD 80 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTS---------TTSCSEEEESSCCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhc---------cCCCCEEEECCccc
Confidence 479999988766655 5889999999999999988887776552 12478888876544
No 305
>1vjf_A DNA-binding protein, putative; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.62A {Caulobacter crescentus CB15} SCOP: d.116.1.1
Probab=39.90 E-value=39 Score=24.69 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-...+.+.|++.||+|+..-...-+|-++..++..-...+-+|-++.
T Consensus 15 ~~~~v~~~L~~~~i~~~~~~~p~~~T~ee~a~~l~~~~~~~~KtLvl 61 (180)
T 1vjf_A 15 TRADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFL 61 (180)
T ss_dssp CHHHHHHHHHHHTCCCEEEECCCCCSHHHHHHHHHHSCSEEEEEEEE
T ss_pred hHHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHcCCCccceeeEEEE
Confidence 35788999999999999865556677888877775444443444443
No 306
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.89 E-value=1.2e+02 Score=22.88 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=17.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|.
T Consensus 28 ~k~~lVTGas~G--IG~aia~~la~~G~ 53 (283)
T 3v8b_A 28 SPVALITGAGSG--IGRATALALAADGV 53 (283)
T ss_dssp CCEEEEESCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 478899998874 45566666666664
No 307
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=39.76 E-value=1e+02 Score=24.90 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCee-EEEE----cCCC-----------ChHHHHHHHHHHhhCCCeEEE
Q 032873 68 DLDLPVMNDAARTLSDFGVPYE-IKIL----PPHQ-----------NCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 68 ~SDl~~~~ka~~~L~~fGI~~e-v~V~----SAHR-----------tp~~~~~~~~~~~~~g~~ViI 118 (131)
-++- .++...+.|+++|+++- ++|. ..|- +++.+.++++.++++|++|++
T Consensus 50 ~~~~-~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 50 WGTD-EARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp GGSH-HHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCch-hHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3443 44788999999999864 3332 1222 688999999999999999966
No 308
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=39.71 E-value=1.3e+02 Score=23.17 Aligned_cols=63 Identities=16% Similarity=0.004 Sum_probs=41.9
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhC-CCeeEEEEcCCCChHHHHH-HHHHHhh-CCCeEEEEecCcC
Q 032873 60 IVGIIMESDLDL---PVMNDAARTLSDFG-VPYEIKILPPHQNCKEALS-YALSAKE-RGIKIIIVGDGVE 124 (131)
Q Consensus 60 ~V~IimGS~SDl---~~~~ka~~~L~~fG-I~~ev~V~SAHRtp~~~~~-~~~~~~~-~g~~ViIA~AG~a 124 (131)
+|.++..++-|. ..++.+.+.|+.+| +++++.-+.. +.+.+... +.+...+ .| +++|-++|+.
T Consensus 36 ~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~-~iivnlsGG~ 104 (244)
T 2wte_A 36 SLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPE-PIISDLTMGM 104 (244)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCS-SEEEECSSSC
T ss_pred EEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCC-cEEEEecCCc
Confidence 677777775543 45566777777887 5899888874 66655543 4444433 34 8999888875
No 309
>3pam_A Transmembrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.31A {Bartonella henselae}
Probab=39.68 E-value=85 Score=23.01 Aligned_cols=57 Identities=19% Similarity=0.094 Sum_probs=38.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
.+-++..+......++-+.+-|+++||.++++... ...|.+...+..+++++..-+.
T Consensus 130 ~l~~~~~~~~~~~~a~~iq~~l~~iGI~v~i~~~~-------~~~~~~~~~~~~~d~~~~~w~~ 186 (259)
T 3pam_A 130 QFEIMTQSLEEEKVALAFQSNLSRLGIHAEIRTVD-------DSQYQNRLGMFNYDMIIGKLKN 186 (259)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTTTCEEEEEECC-------HHHHHHHHHHTCCSEEEEEECC
T ss_pred EEEEEeCCchHHHHHHHHHHHHHHcCCEEEEEecC-------HHHHHHHHhcCCeeEEEeccCC
Confidence 45566665444567888888999999999988764 2234433445678888875443
No 310
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=39.37 E-value=1.3e+02 Score=23.32 Aligned_cols=60 Identities=17% Similarity=0.251 Sum_probs=40.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE-c----CCCChHHHHHHHH-HHhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYAL-SAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~-S----AHRtp~~~~~~~~-~~~~~g~~ViIA~AG~ 123 (131)
.+++.||... ++++.+.+-.+|..--+.|. . +|-.|..+.+.+. -.+..++++|++++..
T Consensus 58 V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s 123 (252)
T 1efp_B 58 IIAVSIGVKQ----AAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQA 123 (252)
T ss_dssp EEEEEEESGG----GHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCC
T ss_pred EEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 6788999755 33343344456998777776 4 4667887777663 3345578999998755
No 311
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=39.20 E-value=48 Score=23.00 Aligned_cols=64 Identities=17% Similarity=0.019 Sum_probs=43.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCee-----------------------EEEEcCCCChHHHHHHHHHHhhCCCeE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYE-----------------------IKILPPHQNCKEALSYALSAKERGIKI 116 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~e-----------------------v~V~SAHRtp~~~~~~~~~~~~~g~~V 116 (131)
.|+||=.|+..-.....+.+-|.++|.+.. +.++..-+.|+.+.++++++.+.|++.
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~v~~~v~e~~~~g~k~ 85 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQNQLSEYNYILSLKPKR 85 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHHHGGGHHHHHHHCCSE
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHHHHHHHHHHHhcCCCE
Confidence 577776666656677788888877764210 234445567778888888888888887
Q ss_pred EEEecCc
Q 032873 117 IIVGDGV 123 (131)
Q Consensus 117 iIA~AG~ 123 (131)
+|--+|.
T Consensus 86 v~~~~G~ 92 (122)
T 3ff4_A 86 VIFNPGT 92 (122)
T ss_dssp EEECTTC
T ss_pred EEECCCC
Confidence 7765553
No 312
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=39.12 E-value=65 Score=27.29 Aligned_cols=47 Identities=9% Similarity=0.137 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeEE
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKII 117 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~Vi 117 (131)
++.+.++.+.+++.|+.+.+..--++|+ |+.+.++++.+.+-|++.|
T Consensus 150 l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i 197 (423)
T 3ivs_A 150 IDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRV 197 (423)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCcc
Confidence 3566677888889999888887778885 6778888888888788653
No 313
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=39.07 E-value=1.1e+02 Score=23.88 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=30.1
Q ss_pred CCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 85 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 85 GI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
++|.-+++ ++.-+.+++.++++.+++.|++.|++..+
T Consensus 211 ~~Pv~vKi-~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKI-APDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEEC-CSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEe-cCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 79999995 46667778899999999999998887654
No 314
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=38.88 E-value=1.4e+02 Score=23.32 Aligned_cols=63 Identities=6% Similarity=0.017 Sum_probs=38.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+||.-++--...++...+.+++.|+....+..-.-.....+..++...++.+.+|||...
T Consensus 131 ~~vaii~d~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~d~~~~l~~ik~~~~~vii~~~ 193 (389)
T 3o21_A 131 EKFVYLYDTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDC 193 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHHTTCEEEEEECTTCCCTHHHHHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEEcCcHHHHHHHHHHHHhhcCCCeEEEEEecCCCCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 468888722222356677777788888865544321112333566777777777788777643
No 315
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=38.82 E-value=1.1e+02 Score=22.33 Aligned_cols=24 Identities=8% Similarity=0.036 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHh---hCCCeEEEEecC
Q 032873 99 CKEALSYALSAK---ERGIKIIIVGDG 122 (131)
Q Consensus 99 p~~~~~~~~~~~---~~g~~ViIA~AG 122 (131)
++.+.++++... -..++++|-.||
T Consensus 66 ~~~v~~~~~~~~~~~~g~id~lvnnAg 92 (260)
T 2qq5_A 66 ESEVRSLFEQVDREQQGRLDVLVNNAY 92 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEECCc
Confidence 444555554432 235788888885
No 316
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=38.80 E-value=1.2e+02 Score=22.79 Aligned_cols=50 Identities=16% Similarity=0.230 Sum_probs=31.6
Q ss_pred HHHHHHHHHHh-----CCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcC
Q 032873 74 MNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 74 ~~ka~~~L~~f-----GI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpG 129 (131)
++++.+.|++. |++++..+..- .| ...+++.++ +++.+|.++-+...+.+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~--~~~I~~~a~--~~DliV~G~~g~~~~~~ 138 (309)
T 3cis_A 84 IDDALKVVEQASLRAGPPTVHSEIVPA--AA--VPTLVDMSK--DAVLMVVGCLGSGRWPG 138 (309)
T ss_dssp HHHHHHHHHHHCSSSCCSCEEEEEESS--CH--HHHHHHHGG--GEEEEEEESSCTTCCTT
T ss_pred HHHHHHHHHHhcccCCCceEEEEEecC--CH--HHHHHHHhc--CCCEEEECCCCCccccc
Confidence 45556666666 99999887742 23 334445443 68999888776655543
No 317
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=38.66 E-value=1.2e+02 Score=22.46 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=38.3
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD--l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.+|++|.|.... ....+...+.|+++|++++..... +.+...+.++... .++++|++...
T Consensus 134 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~---~~~~~~~~~~~l~-~~~dai~~~~D 195 (295)
T 3lft_A 134 KTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVP---STNEIASTVTVMT-SKVDAIWVPID 195 (295)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEES---SGGGHHHHHHHHT-TTCSEEEECSC
T ss_pred cEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecC---CHHHHHHHHHHHH-hcCCEEEECCc
Confidence 589999987432 123566777889999987654332 3455555555543 35788887653
No 318
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=38.57 E-value=77 Score=20.74 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=25.3
Q ss_pred HHHHhCCCe-eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCc
Q 032873 80 TLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 126 (131)
Q Consensus 80 ~L~~fGI~~-ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAh 126 (131)
.++++|++. +..+..- .| ...+++.+++.+++.+|.++-+...
T Consensus 79 ~~~~~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~ 122 (150)
T 3tnj_A 79 IGNTLGIDPAHRWLVWG--EP--REEIIRIAEQENVDLIVVGSHGRHG 122 (150)
T ss_dssp HHHHHTCCGGGEEEEES--CH--HHHHHHHHHHTTCSEEEEEEC----
T ss_pred HHHHcCCCcceEEEecC--CH--HHHHHHHHHHcCCCEEEEecCCCCC
Confidence 345689984 6666542 33 2455666667789888888654433
No 319
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=38.57 E-value=1.2e+02 Score=22.70 Aligned_cols=27 Identities=19% Similarity=0.355 Sum_probs=16.5
Q ss_pred ChHHHHHHHHHHhh--CCCeEEEEecCcC
Q 032873 98 NCKEALSYALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 98 tp~~~~~~~~~~~~--~g~~ViIA~AG~a 124 (131)
.++.+.++++...+ .+++++|-.||..
T Consensus 64 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVM 92 (264)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 45555555544322 3678888888864
No 320
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=38.55 E-value=1.2e+02 Score=22.37 Aligned_cols=26 Identities=19% Similarity=0.083 Sum_probs=17.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|.
T Consensus 7 ~k~~lVTGas~G--IG~aia~~l~~~G~ 32 (250)
T 3nyw_A 7 KGLAIITGASQG--IGAVIAAGLATDGY 32 (250)
T ss_dssp CCEEEEESTTSH--HHHHHHHHHHHHTC
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC
Confidence 468888888874 44566666666664
No 321
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=38.46 E-value=81 Score=25.87 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------e--------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------E--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------e--------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. + ..|-+.-=+.+++.++++.+.++|++||+=
T Consensus 40 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD 117 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVD 117 (484)
T ss_dssp CCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56777766678889999841 1 122233346899999999999999999974
No 322
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=38.43 E-value=60 Score=24.07 Aligned_cols=60 Identities=8% Similarity=-0.151 Sum_probs=45.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~----ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|+.. .++|-+|--.|--..++++ ..+++.+||..
T Consensus 11 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 77 (158)
T 1di0_A 11 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLAR---TGRYAAIVGAA 77 (158)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 5799999998888 77888999999999974 2556667776766555543 46689988853
No 323
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=38.39 E-value=82 Score=24.46 Aligned_cols=61 Identities=3% Similarity=0.052 Sum_probs=35.2
Q ss_pred CeEEEEe-----ccCCCHH-HHHHHHHHHHH-hCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIM-----ESDLDLP-VMNDAARTLSD-FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~Iim-----GS~SDl~-~~~ka~~~L~~-fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+||. .++.|.- .++...+.|.+ .|+........ -.....+..+++..+. +.+|||...
T Consensus 147 ~~v~ii~~~d~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~-~~~~~d~~~~l~~i~~-~~~viv~~~ 214 (435)
T 1dp4_A 147 EHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFV-EGDPDHYPKLLRAVRR-KGRVIYICS 214 (435)
T ss_dssp CSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHHCCEEEEEEEC-TTCGGGHHHHHHHHHH-HCSEEEEES
T ss_pred cEEEEEEEccCCCCcchHHHHHHHHHHHHHhhcCeEEEEEEEe-cCchhhHHHHHHHHHh-hCceEEEec
Confidence 3688882 3333332 44556667777 89876655442 1345555566655555 567776543
No 324
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=38.25 E-value=22 Score=28.56 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=31.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh-CCCeeEEEEcCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDF-GVPYEIKILPPHQ 97 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~f-GI~~ev~V~SAHR 97 (131)
.+|+++.|..|+.-.+....+.|++- ++++.+-+..-|+
T Consensus 26 ~ki~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~ 65 (396)
T 3dzc_A 26 KKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHR 65 (396)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSS
T ss_pred CeEEEEEeccHhHHHHHHHHHHHHhCCCCcEEEEEecccH
Confidence 47999999999999998888888876 5666667777887
No 325
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.00 E-value=1e+02 Score=21.71 Aligned_cols=64 Identities=13% Similarity=0.016 Sum_probs=36.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCChHHHHHHHHHHhhC----C
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP----------------------HQNCKEALSYALSAKER----G 113 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SA----------------------HRtp~~~~~~~~~~~~~----g 113 (131)
++++|+|..+ -+...+++.|-+-|-.+.+.+++- -..++.+.++++...++ +
T Consensus 4 k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 5677888776 445566666666663233333321 12345555555443321 6
Q ss_pred CeEEEEecCcCC
Q 032873 114 IKIIIVGDGVEA 125 (131)
Q Consensus 114 ~~ViIA~AG~aA 125 (131)
++++|-.||...
T Consensus 82 id~li~~Ag~~~ 93 (250)
T 1yo6_A 82 LSLLINNAGVLL 93 (250)
T ss_dssp CCEEEECCCCCC
T ss_pred CcEEEECCcccC
Confidence 899999998654
No 326
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=37.95 E-value=1.1e+02 Score=22.38 Aligned_cols=67 Identities=16% Similarity=-0.003 Sum_probs=42.9
Q ss_pred CCCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC-CCeEEEEecCc
Q 032873 57 DAPIVGIIMESDL------------DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGV 123 (131)
Q Consensus 57 ~~~~V~IimGS~S------------Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~-g~~ViIA~AG~ 123 (131)
..++|+||.=|+. |-. ..-.+..|+++|+......+ .--.++.+.+.++.+-++ +++++|.-.|.
T Consensus 14 ~~~rv~IittGde~~~~~~~~G~i~Dsn-~~~L~~~l~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 14 KSLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSL-VPDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCEEEEEEeCcccccccccCCeEeehH-HHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4478999976652 221 23356678999987543333 234567777766666554 68999988776
Q ss_pred CC
Q 032873 124 EA 125 (131)
Q Consensus 124 aA 125 (131)
+.
T Consensus 92 s~ 93 (178)
T 2pjk_A 92 GY 93 (178)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 327
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=37.93 E-value=58 Score=28.54 Aligned_cols=50 Identities=10% Similarity=0.085 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHH-HHHHHHHHhhCCCeEEEEec
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKE-ALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~-~~~~~~~~~~~g~~ViIA~A 121 (131)
.|.+.|++=.+.++++||+ -+|+. |-.|+. -.++++.+.+.|+.|++.+.
T Consensus 84 ~~~e~~~rDi~LmK~~GiN-~VRvy--~~~P~~~~d~~ldl~~~~GIyVIle~~ 134 (555)
T 2w61_A 84 ADPKICLRDIPFLKMLGVN-TLRVY--AIDPTKSHDICMEALSAEGMYVLLDLS 134 (555)
T ss_dssp GCHHHHHHHHHHHHHHTCS-EEEEC--CCCTTSCCHHHHHHHHHTTCEEEEESC
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEe--ccCCCCChHHHHHHHHhcCCEEEEeCC
Confidence 3789999999999999998 57874 766654 24556667789999999863
No 328
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=37.89 E-value=27 Score=24.99 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 106 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~ 106 (131)
+.+.++.-+|++.||+||+..+..........+|.
T Consensus 12 ~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~ 46 (216)
T 3vk9_A 12 APCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYL 46 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHH
T ss_pred hhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHH
Confidence 66788888999999999998887544433333444
No 329
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=37.89 E-value=79 Score=22.92 Aligned_cols=38 Identities=5% Similarity=-0.024 Sum_probs=30.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN 98 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt 98 (131)
.+|+|+.....+..-+-...+.|+.-| |+++++|....
T Consensus 3 ~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (205)
T 2ab0_A 3 ASALVCLAPGSEETEAVTTIDLLVRGG--IKVTTASVASD 40 (205)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEECSST
T ss_pred cEEEEEEcCCCcHHHHHHHHHHHHHCC--CEEEEEeCCCC
Confidence 479999988888777777788898887 68889988764
No 330
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=37.87 E-value=40 Score=24.30 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHH
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEAL 103 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~ 103 (131)
-+.+.++.-+|+..||+|++..+.....++.+.
T Consensus 32 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~ 64 (241)
T 3vln_A 32 SPFAERTRLVLKAKGIRHEVININLKNKPEWFF 64 (241)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEEBCTTSCCTTHH
T ss_pred CcHHHHHHHHHHHcCCCCeEEecCcccCCHHHH
Confidence 378999999999999999998887655555443
No 331
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=37.75 E-value=1.2e+02 Score=22.17 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=36.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------------------CChHHHHHHHHHHhh
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------------------QNCKEALSYALSAKE 111 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAH---------------------------Rtp~~~~~~~~~~~~ 111 (131)
.++++|+|..|+--+...+++.|-+.|. .+.++... ..++.+.++++...+
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 4688888877433345556666655553 23333222 234445555544322
Q ss_pred --CCCeEEEEecCcCC
Q 032873 112 --RGIKIIIVGDGVEA 125 (131)
Q Consensus 112 --~g~~ViIA~AG~aA 125 (131)
..++++|-.||...
T Consensus 98 ~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 98 DFGQIDAFIANAGATA 113 (267)
T ss_dssp HTSCCSEEEECCCCCC
T ss_pred HcCCCCEEEECCCcCC
Confidence 36799999998653
No 332
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=37.56 E-value=1.4e+02 Score=22.86 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=45.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---------------CCChHHHHHHHHHHhh--CCCeEEEEec
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKE--RGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SA---------------HRtp~~~~~~~~~~~~--~g~~ViIA~A 121 (131)
.+|++|+|..| -+.+.+++.|-+-|-.+ -+++- -..++...++++...+ .+++++|--|
T Consensus 11 GK~alVTGas~--GIG~aia~~la~~Ga~V--~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 86 (261)
T 4h15_A 11 GKRALITAGTK--GAGAATVSLFLELGAQV--LTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML 86 (261)
T ss_dssp TCEEEESCCSS--HHHHHHHHHHHHTTCEE--EEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred CCEEEEeccCc--HHHHHHHHHHHHcCCEE--EEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 68999999999 46678888888888643 22221 1345667777755433 4689999999
Q ss_pred CcCCcC
Q 032873 122 GVEAHL 127 (131)
Q Consensus 122 G~aAhL 127 (131)
|.....
T Consensus 87 G~~~~~ 92 (261)
T 4h15_A 87 GGSSAA 92 (261)
T ss_dssp CCCCCC
T ss_pred CCCccC
Confidence 975543
No 333
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=37.56 E-value=89 Score=26.77 Aligned_cols=51 Identities=14% Similarity=0.232 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. + ..|-+-.=+++++.++++.+.++|++||+=
T Consensus 37 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD 107 (589)
T 3aj7_A 37 GDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITD 107 (589)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57887777778999999841 2 244455557899999999999999999974
No 334
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=37.53 E-value=63 Score=26.59 Aligned_cols=58 Identities=9% Similarity=-0.051 Sum_probs=41.2
Q ss_pred EEEEeccCCCHH--------------HHHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeEEE
Q 032873 61 VGIIMESDLDLP--------------VMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIII 118 (131)
Q Consensus 61 V~IimGS~SDl~--------------~~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~ViI 118 (131)
+.-+..|.||.- .+.++.+.++++|..+.+.--.+.|+ |+.+.++++.+.+-|++.|-
T Consensus 103 ~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~ 175 (370)
T 3rmj_A 103 RIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTIN 175 (370)
T ss_dssp EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEE
Confidence 444667889864 34556777788998877666556666 67788888888888887543
No 335
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=37.35 E-value=78 Score=28.89 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=57.2
Q ss_pred eecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec--cCCCHHHHHHHHHHHHHhCCCeeEEEEcC---
Q 032873 21 VLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME--SDLDLPVMNDAARTLSDFGVPYEIKILPP--- 95 (131)
Q Consensus 21 Vt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG--S~SDl~~~~ka~~~L~~fGI~~ev~V~SA--- 95 (131)
+.+++..++-++|..|...-... | . .-.+.... +..+...+.+.++-+++.|||+|+-++..
T Consensus 237 ~~G~~p~~v~~~Y~~ltG~~~lp-----------P-~-WalG~~~sr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~ 303 (817)
T 4ba0_A 237 VAGNSYPSLIENFTQVTGRQPLP-----------P-R-WALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWF 303 (817)
T ss_dssp EECSSHHHHHHHHHHHHCCCCCC-----------C-G-GGGSBEECCBCCCSHHHHHHHHHHHHHHTCCCCEEEECGGGS
T ss_pred ecCCCHHHHHHHHHHhcCCCCCC-----------C-c-cccCcceecccCCCHHHHHHHHHHHHHhCCCCcEEEEccccc
Confidence 45667888888888876332211 0 1 01222222 23377788888889999999999999874
Q ss_pred ---------------CCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 96 ---------------HQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 96 ---------------HRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.|-|+ ..+++++.+++|.++++-+
T Consensus 304 g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~~G~k~vl~i 342 (817)
T 4ba0_A 304 GKDIKGHMGNLDWDKENFPT-PLDMMADFKQQGVKTVLIT 342 (817)
T ss_dssp CSSSSSCTTCCSCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred CCccccccCccccccccCCC-HHHHHHHHHHCCCEEEEEe
Confidence 24555 3678888888999887743
No 336
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=37.32 E-value=76 Score=26.78 Aligned_cols=50 Identities=22% Similarity=0.309 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------E-IKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
-|+.-+.+-...|+++||.. + ..|-+.-=+.+++.++++.+.++|++||+
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vil 97 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVIL 97 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 58888777788999999852 1 23444445788999999999999999986
No 337
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=37.22 E-value=46 Score=24.13 Aligned_cols=64 Identities=8% Similarity=-0.010 Sum_probs=42.2
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHh--hCCCeEEEEecC
Q 032873 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK--ERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD-l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~--~~g~~ViIA~AG 122 (131)
.+|+++.|...+ ..-.+-..+.|++.|++++..+....-+++...+.++..- ...++.|++..+
T Consensus 119 ~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d 185 (280)
T 3gyb_A 119 THIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYTETLALLKEHPEVTAIFSSND 185 (280)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHHHHHHHHHHCTTCCEEEESSH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHHHHHHHHhCCCCCCEEEECCh
Confidence 579999998765 2223345567888999988666666667766666554332 235788888754
No 338
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=36.99 E-value=7.9 Score=31.86 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=22.4
Q ss_pred eecceeeecCChHHHhhccccccccc
Q 032873 15 SRGTIPVLASSNGSATSRRKDDSSVR 40 (131)
Q Consensus 15 yrghitVt~~~l~~vk~~~~~v~~~~ 40 (131)
.+||+|++++|.++++++.+.+.+.+
T Consensus 389 kmGhv~~~~~~~~~~~~~a~~~~~~l 414 (419)
T 4e4t_A 389 KMGHVNFTAEMRDDAVAAATACAQLL 414 (419)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCHHHHHHHHHHHHHhc
Confidence 46999999999999999988876554
No 339
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.99 E-value=1.3e+02 Score=22.38 Aligned_cols=28 Identities=14% Similarity=0.077 Sum_probs=19.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
...++++|+|..+ -+...+++.|-+-|.
T Consensus 19 l~~k~~lVTGas~--gIG~~ia~~l~~~G~ 46 (267)
T 1vl8_A 19 LRGRVALVTGGSR--GLGFGIAQGLAEAGC 46 (267)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 3467999999987 445666666666663
No 340
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=36.95 E-value=48 Score=23.58 Aligned_cols=29 Identities=17% Similarity=0.081 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCK 100 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~ 100 (131)
+.+.++.-+|+..||+|+...+..++.|+
T Consensus 12 p~~~~v~~~L~~~gi~ye~~~v~~~~~~~ 40 (229)
T 3lxz_A 12 NYYNMVKLALLEKGLTFEEVTFYGGQAPQ 40 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCSCHH
T ss_pred chHHHHHHHHHHcCCCCEEEecCCCCCHH
Confidence 77899999999999999988876665554
No 341
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=36.88 E-value=1.1e+02 Score=21.74 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=39.1
Q ss_pred CCeEEEEeccCCCHHH-------HHHHHHHHHHh-----CCCeeEEEEcCCCChHHHHHHHHHHhh-CCCeEEEEecCcC
Q 032873 58 APIVGIIMESDLDLPV-------MNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE 124 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~-------~~ka~~~L~~f-----GI~~ev~V~SAHRtp~~~~~~~~~~~~-~g~~ViIA~AG~a 124 (131)
.++|+||.-++. +.. ..-..+.|+++ |+......+ .--.++.+.+-++++.+ .+++++|.-.|.+
T Consensus 5 ~~rv~IistGde-~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~i-v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g 82 (167)
T 1uuy_A 5 EYKVAILTVSDT-VSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAV-VPDEVERIKDILQKWSDVDEMDLILTLGGTG 82 (167)
T ss_dssp SEEEEEEEECHH-HHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEE-ECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CcEEEEEEECCc-ccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEE-cCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 368999985542 110 11345677777 765432222 33456677776666644 4689999887776
Q ss_pred C
Q 032873 125 A 125 (131)
Q Consensus 125 A 125 (131)
.
T Consensus 83 ~ 83 (167)
T 1uuy_A 83 F 83 (167)
T ss_dssp S
T ss_pred C
Confidence 4
No 342
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=36.85 E-value=1.1e+02 Score=22.20 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCC----Ch--------HHHHHHHHHHhhCCCeEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQ----NC--------KEALSYALSAKERGIKIII 118 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHR----tp--------~~~~~~~~~~~~~g~~ViI 118 (131)
..++++.+.+..+|+++-+-..+... .. +.+.++++.+++.|+++.|
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 57788888888999986554433221 11 3355556667777877665
No 343
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.81 E-value=51 Score=21.82 Aligned_cols=30 Identities=13% Similarity=-0.001 Sum_probs=24.1
Q ss_pred EEeccCCCHHHHHHHHHHHHHhCCCeeEEE
Q 032873 63 IIMESDLDLPVMNDAARTLSDFGVPYEIKI 92 (131)
Q Consensus 63 IimGS~SDl~~~~ka~~~L~~fGI~~ev~V 92 (131)
||..++.+....++....|+..+||+...+
T Consensus 35 ViiA~D~~~~~~~~i~~~c~~~~ip~~~~~ 64 (99)
T 3j21_Z 35 IIVAKNAPKEIKDDIYYYAKLSDIPVYEFE 64 (99)
T ss_dssp EEEECCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEeCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 555666889999999999999999975443
No 344
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.75 E-value=55 Score=22.09 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=35.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.++. .+.=+.|+++...|+++|++|+..=+.-+.. ++...++.+....+++ .+||
T Consensus 28 ~vvvf~--~~~Cp~C~~~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 28 CVVIFS--KTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp SEEEEE--CSSCSHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred cEEEEE--cCCChHHHHHHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 355543 2445899999999999999988655544422 4444445544444444 4444
No 345
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=36.72 E-value=1.4e+02 Score=23.63 Aligned_cols=64 Identities=13% Similarity=0.197 Sum_probs=47.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHH-hCCCee---------------------EEEEcCCCChHHHHHHHHHHhhCCCeE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSD-FGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKI 116 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~-fGI~~e---------------------v~V~SAHRtp~~~~~~~~~~~~~g~~V 116 (131)
..-.+++|+-.+++++.+++--|++ ..++.+ +-+.+--++-+++.+.+++.+.+|.+|
T Consensus 204 ~~~~~~lG~G~~~~~A~E~ALKlkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v 283 (334)
T 3hba_A 204 VKNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESYGSHVEQIANVKQRGANL 283 (334)
T ss_dssp CCEEEEEECTHHHHHHHHHHHHHHHHHCCEEEEEETTTCC-----------CEEEEECCSTTHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEeCCcCHHHHHHHHHHHHHHcCcceEEecHHhhccchHHhcCCCceEEEEecCchhHHHHHHHHHHHHHcCCeE
Confidence 3577899999999999988766655 456422 345566667778888888888999988
Q ss_pred EEEecC
Q 032873 117 IIVGDG 122 (131)
Q Consensus 117 iIA~AG 122 (131)
++....
T Consensus 284 ~~i~~~ 289 (334)
T 3hba_A 284 IHLHQT 289 (334)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 876543
No 346
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Probab=36.60 E-value=45 Score=23.37 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEA 102 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~ 102 (131)
+.++++.-.|+..||+|+...+.....++++
T Consensus 12 p~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~ 42 (213)
T 3m0f_A 12 PYVRRVAISLKSLGLPFEHHSLSVFSTFEQF 42 (213)
T ss_dssp HHHHHHHHHHHHHTCCCEEECCCTTTTHHHH
T ss_pred CcHHHHHHHHHHCCCCcEEEEecCCCCcHHH
Confidence 7889999999999999999877755444433
No 347
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.48 E-value=69 Score=24.57 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=39.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHH-hhCCCeEEEEecCcCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGVEA 125 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~-~~~g~~ViIA~AG~aA 125 (131)
.+.++++... ..+.+.+++.+++...++.|+. .+-++..+.++.. ...|++|||+--|.++
T Consensus 14 ~ii~i~~~~~---L~~~~~~i~~e~~~~~~I~vi~--~~le~av~~a~~~~~~~~~dVIISRGgta~ 75 (225)
T 2pju_A 14 PVIWTVSVTR---LFELFRDISLEFDHLANITPIQ--LGFEKAVTYIRKKLANERCDAIIAAGSNGA 75 (225)
T ss_dssp CEEEEECCHH---HHHHHHHHHTTTTTTCEEEEEC--CCHHHHHHHHHHHTTTSCCSEEEEEHHHHH
T ss_pred CEEEEEchHH---HHHHHHHHHHhhCCCceEEEec--CcHHHHHHHHHHHHhcCCCeEEEeCChHHH
Confidence 4666665433 3335556667888878888764 3467777777554 4457999999866554
No 348
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=36.42 E-value=1.3e+02 Score=22.44 Aligned_cols=26 Identities=19% Similarity=0.157 Sum_probs=16.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 28 ~k~~lVTGas~--GIG~aia~~la~~G~ 53 (270)
T 3ftp_A 28 KQVAIVTGASR--GIGRAIALELARRGA 53 (270)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 56888888877 344555555555553
No 349
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=36.29 E-value=1.1e+02 Score=25.88 Aligned_cols=58 Identities=10% Similarity=0.068 Sum_probs=42.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHh-------------hCCCeEEEEecCc
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-------------ERGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~-------------~~g~~ViIA~AG~ 123 (131)
.+.++|.|+ + ...+.++..|.+.|. .+.|+ -|++++..++++... ...++++|..||.
T Consensus 364 ~k~vlV~Ga-G--Gig~aia~~L~~~G~--~V~i~--~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 364 SKTVVVIGA-G--GAGKALAYGAKEKGA--KVVIA--NRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp --CEEEECC-S--HHHHHHHHHHHHHCC---CEEE--ESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSST
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCC
Confidence 467888998 4 899999999999996 45554 589999888775431 1236999988875
No 350
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=36.28 E-value=63 Score=28.29 Aligned_cols=51 Identities=22% Similarity=0.136 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHhCCCee-------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYE-------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~e-------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||..- ..|-+..=+.+++.++++.+.++|++||+=
T Consensus 262 Gdl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD 331 (696)
T 4aee_A 262 GDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLD 331 (696)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEe
Confidence 378877777889999999521 234444457899999999999999999973
No 351
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=36.25 E-value=87 Score=20.23 Aligned_cols=49 Identities=10% Similarity=0.167 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCCC---eeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCc
Q 032873 75 NDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (131)
Q Consensus 75 ~ka~~~L~~fGI~---~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLp 128 (131)
+...+.++++|++ ++..+..- .| ...+++.+++.+++.+|.++-+ ..+.
T Consensus 69 ~~l~~~~~~~~~~~~~v~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~-~~~~ 120 (143)
T 3fdx_A 69 TQLKEIAKKFSIPEDRMHFHVAEG--SP--KDKILALAKSLPADLVIIASHR-PDIT 120 (143)
T ss_dssp HHHHHHHTTSCCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEEESSC-TTCC
T ss_pred HHHHHHHHHcCCCCCceEEEEEec--Ch--HHHHHHHHHHhCCCEEEEeCCC-CCCe
Confidence 3445555678775 35555532 33 3455666777889999999875 4443
No 352
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=36.15 E-value=1.2e+02 Score=21.94 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCC
Q 032873 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aA 125 (131)
++++.+.++..|++++..+..- .|. ..+++. +.+++.+|.++-+..
T Consensus 76 l~~~~~~~~~~g~~~~~~~~~g--~~~--~~I~~~--~~~~dliV~G~~g~~ 121 (268)
T 3ab8_A 76 LERVRQSALAAGVAVEAVLEEG--VPH--EAILRR--ARAADLLVLGRSGEA 121 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEE--CHH--HHHHHH--HTTCSEEEEESSCTT
T ss_pred HHHHHHHHHhCCCCeEEEEecC--CHH--HHHHhh--ccCCCEEEEeccCCC
Confidence 3445555667799988887632 232 334443 567888888865544
No 353
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=36.10 E-value=98 Score=22.88 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=45.5
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCee-EEEEcCCCChHHHHHHHHHH--hhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSA--KERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~e-v~V~SAHRtp~~~~~~~~~~--~~~g~~ViIA~A 121 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|.+++ ++|-+|--.|--..++++.. ....++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG 81 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALG 81 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEee
Confidence 5899999998887 777889999999995554 55666777776666665431 115588888853
No 354
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=35.98 E-value=58 Score=21.55 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=34.4
Q ss_pred EEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCC-eEEEEecCcCC
Q 032873 63 IIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIIIVGDGVEA 125 (131)
Q Consensus 63 IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~-~ViIA~AG~aA 125 (131)
||..++.+....++....|++.+||+...+ -+-+++-..+. ....+ .+-|.=.|.|.
T Consensus 36 ViiA~D~~~~~~~~l~~~c~~~~vp~~~~~----~s~~eLG~a~G--~~~~~~~vai~d~g~a~ 93 (101)
T 1w41_A 36 IIVARNARPDIKEDIEYYARLSGIPVYEFE----GTSVELGTLLG--RPHTVSALAVVDPGASR 93 (101)
T ss_dssp EEEETTSCHHHHHHHHHHHHHHTCCEEEES----SCHHHHHHHTT--CSSCCCEEEEEECTTCC
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCCCEEEec----CCHHHHHHHhC--CCCcEEEEEEecCCHHH
Confidence 455566788999999999999999965332 23444444431 01122 34455556654
No 355
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=35.94 E-value=1.2e+02 Score=21.82 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=42.9
Q ss_pred CCCeEEEEeccCC-----CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhC-CCeEEEEecCcCC
Q 032873 57 DAPIVGIIMESDL-----DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEA 125 (131)
Q Consensus 57 ~~~~V~IimGS~S-----Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~-g~~ViIA~AG~aA 125 (131)
..++|+||.=++. |-. ..-.+..|+++|+......+ .--.++.+.+-++++.++ +++++|.-.|.+.
T Consensus 9 ~~~~v~Ii~tGdE~g~i~D~n-~~~l~~~L~~~G~~v~~~~i-v~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 9 IPTRIAILTVSNRRGEEDDTS-GHYLRDSAQEAGHHVVDKAI-VKENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp CCCEEEEEEECSSCCGGGCHH-HHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred CCCEEEEEEEeCCCCcccCcc-HHHHHHHHHHCCCeEeEEEE-eCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 3468988874433 332 23366778999986543322 234667777777766665 6899998877654
No 356
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=35.72 E-value=1.5e+02 Score=22.69 Aligned_cols=64 Identities=16% Similarity=0.177 Sum_probs=43.8
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCChHHHHHHHHHHhh-CCCeEEEEecC
Q 032873 59 PIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SD-----l~~~~ka~~~L~~f-------GI~~ev~V~SAHRtp~~~~~~~~~~~~-~g~~ViIA~AG 122 (131)
.+|+++.-.... ....+-+...+++. |.++++.+....-.|++..+.++..-+ +++..||...+
T Consensus 8 ~~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 84 (385)
T 1pea_A 8 PLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYM 84 (385)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCS
T ss_pred eEEEEEECCCCcchhcCHHHHHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCc
Confidence 478888754322 23344555566765 777888888888889888888876654 78888886543
No 357
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=35.70 E-value=1e+02 Score=23.40 Aligned_cols=40 Identities=10% Similarity=-0.045 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCC-------CChHHHHHHHHHHhhCCCe
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPH-------QNCKEALSYALSAKERGIK 115 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAH-------Rtp~~~~~~~~~~~~~g~~ 115 (131)
.....+.++|+++|++..+.|++-. +.|+.+.++. +.|..
T Consensus 54 ~~~~~il~iL~~~~vkATFFv~g~~~g~~~~~~~p~~lr~i~----~~Ghe 100 (254)
T 2iw0_A 54 TFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMR----ADGHL 100 (254)
T ss_dssp TTHHHHHHHHHHHTCCCEEEECSBSSSBTTSTTHHHHHHHHH----HTTCE
T ss_pred hhHHHHHHHHHHcCCCEEEEEECCcccccccccCHHHHHHHH----HCCCE
Confidence 5678899999999999999999876 5565555544 45643
No 358
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=35.63 E-value=1.2e+02 Score=21.75 Aligned_cols=60 Identities=13% Similarity=0.010 Sum_probs=33.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHH-HHhCCCeeEEEEcCCC-----------ChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTL-SDFGVPYEIKILPPHQ-----------NCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L-~~fGI~~ev~V~SAHR-----------tp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|.||.||...-..-.+.++.+ +.+.-..++.+..... .|+.+.++.+...+ ++.||-+
T Consensus 3 ~kilii~gS~r~~s~t~~la~~~~~~~~~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~--AD~iV~~ 74 (192)
T 3fvw_A 3 KRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQE--ADAIWIF 74 (192)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHH--CSEEEEE
T ss_pred CEEEEEEcCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHh--CCEEEEE
Confidence 47999999987544433333332 3333224555555432 35567777766655 4445444
No 359
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=35.59 E-value=46 Score=26.72 Aligned_cols=68 Identities=6% Similarity=-0.007 Sum_probs=46.3
Q ss_pred eeecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 032873 20 PVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC 99 (131)
Q Consensus 20 tVt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp 99 (131)
-||+.+....-.-...+++++..- . ..+..+|+|+..-..+..-+-...+.|++-| |+++++|....|
T Consensus 177 iiT~~g~~~~~d~al~li~~l~g~---------~-~~~~~ki~ill~dg~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 244 (396)
T 3uk7_A 177 LITAATYEGHPEFIQLFVKALGGK---------I-TGANKRILFLCGDYMEDYEVKVPFQSLQALG--CQVDAVCPEKKA 244 (396)
T ss_dssp EEEESSGGGHHHHHHHHHHHTTCE---------E-ECCCCEEEEECCTTEEHHHHHHHHHHHHHHT--CEEEEECTTCCT
T ss_pred EEEecCcccHHHHHHHHHHHHhcc---------c-hhccceEEEEecCCCcchhHHHHHHHHHHCC--CEEEEECCCCCC
Confidence 466666655555555555555442 1 1234589999998777777777888898887 788999887654
No 360
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=35.46 E-value=1.2e+02 Score=21.51 Aligned_cols=42 Identities=17% Similarity=0.142 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhCCCeeEEEE-cCC--CChHHHHHHHHHHhhCC
Q 032873 72 PVMNDAARTLSDFGVPYEIKIL-PPH--QNCKEALSYALSAKERG 113 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~-SAH--Rtp~~~~~~~~~~~~~g 113 (131)
+.+.++.+.|.+.|+++.++.. ... -+.+++.++++.+.+.|
T Consensus 147 ~~~~~~i~~l~~~g~~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~ 191 (245)
T 3c8f_A 147 HRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMG 191 (245)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECTTTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcC
Confidence 4444455555555555444422 111 23345555554444443
No 361
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=35.42 E-value=82 Score=23.41 Aligned_cols=49 Identities=14% Similarity=0.249 Sum_probs=31.3
Q ss_pred HHHHHHHhCCC-eeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcC
Q 032873 77 AARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 77 a~~~L~~fGI~-~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpG 129 (131)
..+.++++|++ ++..+..- .| ...+.+++++.+++.+|.++-+-..+.+
T Consensus 204 l~~~~~~~g~~~~~~~v~~g--~~--~~~I~~~a~~~~~dLiVmG~~g~~~~~~ 253 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIEEG--PA--DVLIPRTAQKLDAVVTVIGTVARTGLSG 253 (290)
T ss_dssp HHHHHHHHTCCTTTEEEEES--CH--HHHHHHHHHHHTCSEEEEECCSSCCGGG
T ss_pred HHHHHHHcCCCcceEEEecc--CH--HHHHHHHHHhcCCCEEEECCCCCcCCcc
Confidence 33456778995 56666543 33 3345566667789999988876665554
No 362
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=35.39 E-value=1.1e+02 Score=22.52 Aligned_cols=47 Identities=4% Similarity=-0.030 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------HHHHHHHHHHhhCCCeEEE
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNC------------KEALSYALSAKERGIKIII 118 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp------------~~~~~~~~~~~~~g~~ViI 118 (131)
+..++++.+.+..+|+++-+ +.+-...+ +.+.++++.+++.|+++.|
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~-~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 141 (286)
T 3dx5_A 83 IEKCEQLAILANWFKTNKIR-TFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL 141 (286)
T ss_dssp HHHHHHHHHHHHHHTCCEEE-ECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEE-EcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 45778888888999998653 33322221 3345556777788887665
No 363
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=35.20 E-value=63 Score=24.75 Aligned_cols=87 Identities=7% Similarity=0.046 Sum_probs=48.5
Q ss_pred ecceeeecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEeccCCCH--HHHHHHHHHHHHhCCCeeEEEE
Q 032873 16 RGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKIL 93 (131)
Q Consensus 16 rghitVt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS~SDl--~~~~ka~~~L~~fGI~~ev~V~ 93 (131)
.....+...+....+.-.+++.+++. ..+|+||... +++ ...+...+.|++.|++......
T Consensus 117 ~~~f~~~~~~~~~~~~~~~~l~~~~g----------------~~~iaii~~~-~~~g~~~~~~~~~~l~~~G~~v~~~~~ 179 (392)
T 3lkb_A 117 DYIFLPTTSYSEQVVALLEYIAREKK----------------GAKVALVVHP-SPFGRAPVEDARKAARELGLQIVDVQE 179 (392)
T ss_dssp TTBCEEECCHHHHHHHHHHHHHHHCT----------------TCEEEEEECS-SHHHHTTHHHHHHHHHHHTCEEEEEEE
T ss_pred CceEecCCChHHHHHHHHHHHHHhCC----------------CCEEEEEEeC-CchhhhHHHHHHHHHHHcCCeEEEEEe
Confidence 33444555555566665566653321 1479999753 443 2345667788899987643332
Q ss_pred cCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 94 PPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 94 SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.......+...++.....+.++|+..
T Consensus 180 -~~~~~~d~~~~~~~l~~~~~dav~~~ 205 (392)
T 3lkb_A 180 -VGSGNLDNTALLKRFEQAGVEYVVHQ 205 (392)
T ss_dssp -CCTTCCCCHHHHHHHHHTTCCEEEEE
T ss_pred -eCCCCcCHHHHHHHHHhcCCCEEEEe
Confidence 22233334444555555678877753
No 364
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.11 E-value=1.4e+02 Score=22.43 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=23.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~ 104 (131)
.++++|+|..+- +...+++.|-+-|. . |+-.-|.++++.+
T Consensus 8 gk~vlVTGas~G--IG~aia~~la~~G~--~--V~~~~r~~~~~~~ 47 (280)
T 3tox_A 8 GKIAIVTGASSG--IGRAAALLFAREGA--K--VVVTARNGNALAE 47 (280)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC--E--EEECCSCHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--E--EEEEECCHHHHHH
Confidence 478888888774 45566666666664 2 3333455544443
No 365
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=35.10 E-value=1.6e+02 Score=22.91 Aligned_cols=60 Identities=12% Similarity=0.225 Sum_probs=41.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE-c----CCCChHHHHHHH-HHHhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYA-LSAKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~-S----AHRtp~~~~~~~-~~~~~~g~~ViIA~AG~ 123 (131)
.+++.||... ++++.+.+-.+|..--+.|. . +|-.|..+.+.+ +-.+..++++|++++-.
T Consensus 61 V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s 126 (255)
T 1efv_B 61 VIAVSCGPAQ----CQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQA 126 (255)
T ss_dssp EEEEEEESTT----HHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCC
T ss_pred EEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 6788999754 34444444557998777776 3 577788777766 33345578999998754
No 366
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=35.10 E-value=1.6e+02 Score=22.88 Aligned_cols=61 Identities=13% Similarity=0.197 Sum_probs=43.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh-------------CCCeEEEEe--cCc
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------RGIKIIIVG--DGV 123 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~-------------~g~~ViIA~--AG~ 123 (131)
.+.++|.|+- ...+.++..|.+.|+. ++.|+ -|++++..++++.... .+++++|.. +|+
T Consensus 120 ~k~~lvlGaG---g~~~aia~~L~~~G~~-~v~i~--~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm 193 (272)
T 3pwz_A 120 NRRVLLLGAG---GAVRGALLPFLQAGPS-ELVIA--NRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASL 193 (272)
T ss_dssp TSEEEEECCS---HHHHHHHHHHHHTCCS-EEEEE--CSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGG
T ss_pred CCEEEEECcc---HHHHHHHHHHHHcCCC-EEEEE--eCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCC
Confidence 3566777874 7788889999999974 45554 6999999998865431 567888876 354
Q ss_pred CC
Q 032873 124 EA 125 (131)
Q Consensus 124 aA 125 (131)
..
T Consensus 194 ~~ 195 (272)
T 3pwz_A 194 TA 195 (272)
T ss_dssp GT
T ss_pred CC
Confidence 43
No 367
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=35.08 E-value=84 Score=26.47 Aligned_cols=52 Identities=29% Similarity=0.212 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPY-------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~-------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
-|+.-+.+-...|+++||.. + ..|-+.-=+.+++.++++.+.++|++||+=+
T Consensus 28 Gdl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (543)
T 2zic_A 28 GDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDL 99 (543)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57777766678889999842 1 2344444578899999999999999999743
No 368
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=35.04 E-value=48 Score=23.65 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC----CCChH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP----HQNCK 100 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA----HRtp~ 100 (131)
+.+.++.-+|+..||+|+...+.. |+.|+
T Consensus 13 p~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~ 45 (225)
T 3m8n_A 13 GNSYKVRLALALLDAPYRAVEVDILRGESRTPD 45 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGGTTTSSHH
T ss_pred CCHHHHHHHHHHcCCCeEEEEeCCCCCccCCHH
Confidence 678999999999999999988865 55554
No 369
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=34.87 E-value=85 Score=20.77 Aligned_cols=41 Identities=7% Similarity=0.146 Sum_probs=30.5
Q ss_pred HHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 78 ARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 78 ~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
.+.+++.++. ++-|+.....++...++++.+...|++|.+.
T Consensus 58 ~~~~~~~~id-~viia~~~~~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 58 ERLIKKHCIS-TVLLAVPSASQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp HHHHHHHTCC-EEEECCTTSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHHHHcCCeEEEC
Confidence 3456677775 4556666777788888888888899998765
No 370
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=34.76 E-value=78 Score=23.90 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=41.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChHHHHHHH-HHHhhCCCeEEEEecC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYA-LSAKERGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---AHRtp~~~~~~~-~~~~~~g~~ViIA~AG 122 (131)
..+++++|+. ++.+.+.|-.+|..--+.+-. .|..|+...+.+ +-.++.++++|++++-
T Consensus 38 ~v~av~~G~~-----~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t 100 (217)
T 3ih5_A 38 QLEAVVAGTG-----LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEEQPQICLMGAT 100 (217)
T ss_dssp CEEEEEEESC-----CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECS
T ss_pred eEEEEEECCC-----HHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 3688999985 344455566789987777765 477788777766 4445667889998863
No 371
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=34.60 E-value=77 Score=25.90 Aligned_cols=54 Identities=20% Similarity=0.285 Sum_probs=41.1
Q ss_pred EEEEeccC-CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 61 VGIIMESD-LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 61 V~IimGS~-SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
|+|--|-. +++|--+++.+.|+..||. .+|+-++- ...++.+++.|++|++.+-
T Consensus 3 iGv~yG~~~~nlp~p~~Vv~llks~gi~-~VRlY~~D------~~vL~Al~~sgi~V~lGV~ 57 (323)
T 3ur8_A 3 IGVCYGKIANNLPSDQDVIKLYNANNIK-KMRIYYPH------TNVFNALKGSNIEIILDVP 57 (323)
T ss_dssp EEEEECCCSSSCCCHHHHHHHHHHTTCC-EEEESSCC------HHHHHHHTTCCCEEEEEEC
T ss_pred eeEEcCcCCCCCCCHHHHHHHHHhCCCC-eEEecCCC------HHHHHHHHhcCCeEEEecc
Confidence 66666654 4588888999999999987 89998876 3445555678999999874
No 372
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=34.56 E-value=1.3e+02 Score=21.58 Aligned_cols=40 Identities=8% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC 99 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp 99 (131)
..+|+|+.....+..-+-...+.|+.-| |++.++|....|
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG--HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT--CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC--CEEEEEECCCCc
Confidence 3579999987766666666777888876 688999988765
No 373
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=34.47 E-value=1e+02 Score=23.30 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC----------------------------CChHHHHHHHHHHhhCCCeEEEEe
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPH----------------------------QNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAH----------------------------Rtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
|...+++-.+.++++|+++ +|+- +| ..-+.+.++++.+.+.|++|++..
T Consensus 34 ~~~~~~~~l~~~k~~G~N~-vR~~-~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 34 NHADVDSTFSHISSSGLKV-VRVW-GFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCE-EECC-CCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEES
T ss_pred CHHHHHHHHHHHHHcCCCE-EEEc-cccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 7788999999999999984 5552 11 114566788888999999999986
No 374
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=34.44 E-value=1.5e+02 Score=22.29 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=18.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|-
T Consensus 32 gk~~lVTGas~--GIG~aia~~la~~G~ 57 (276)
T 3r1i_A 32 GKRALITGAST--GIGKKVALAYAEAGA 57 (276)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 57999999987 455666667766664
No 375
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=34.41 E-value=1.4e+02 Score=22.22 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=38.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH------------------------HHHHHhhC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS------------------------YALSAKER 112 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~------------------------~~~~~~~~ 112 (131)
...++++|+|..+ -+...+++.|-+-|. .+.+ .-|++++..+ +++.. .
T Consensus 14 l~gk~vlVTGas~--gIG~~~a~~L~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~ 85 (291)
T 3rd5_A 14 FAQRTVVITGANS--GLGAVTARELARRGA--TVIM--AVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--S 85 (291)
T ss_dssp CTTCEEEEECCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--C
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--C
Confidence 3468999999987 456777777777774 3333 3355544433 33222 3
Q ss_pred CCeEEEEecCcCC
Q 032873 113 GIKIIIVGDGVEA 125 (131)
Q Consensus 113 g~~ViIA~AG~aA 125 (131)
+++++|-.||...
T Consensus 86 ~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 86 GADVLINNAGIMA 98 (291)
T ss_dssp CEEEEEECCCCCS
T ss_pred CCCEEEECCcCCC
Confidence 5789999988754
No 376
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=34.37 E-value=87 Score=22.03 Aligned_cols=39 Identities=5% Similarity=0.114 Sum_probs=30.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC 99 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp 99 (131)
.+|+|+.....+..-+-...+.|+.-| |+++++|.+..|
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 48 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAG--GTTELISLEPGE 48 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTT--CEEEEEESSSSE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCC--CEEEEEecCCCc
Confidence 479999988777777777778888876 688888887654
No 377
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.32 E-value=1.4e+02 Score=22.24 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=17.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|.
T Consensus 26 gk~~lVTGas~g--IG~aia~~la~~G~ 51 (271)
T 4ibo_A 26 GRTALVTGSSRG--LGRAMAEGLAVAGA 51 (271)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 578888888774 44556666666663
No 378
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=34.31 E-value=99 Score=26.64 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=37.9
Q ss_pred CHHHH-HHHHHHHHHhCCCe--------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 70 DLPVM-NDAARTLSDFGVPY--------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 70 Dl~~~-~ka~~~L~~fGI~~--------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
|+.-+ ++....|+++||.. + ..|-+..=+++++.++++.+.++|++||+=
T Consensus 153 ~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD 224 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILD 224 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 66544 45558999999952 1 245555567999999999999999999974
No 379
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=34.26 E-value=75 Score=27.68 Aligned_cols=51 Identities=22% Similarity=0.214 Sum_probs=36.5
Q ss_pred CCHHHHHHHHH--HHHHhCCC-------ee-------------------------EEEEcCCCChHHHHHHHHHHhhCCC
Q 032873 69 LDLPVMNDAAR--TLSDFGVP-------YE-------------------------IKILPPHQNCKEALSYALSAKERGI 114 (131)
Q Consensus 69 SDl~~~~ka~~--~L~~fGI~-------~e-------------------------v~V~SAHRtp~~~~~~~~~~~~~g~ 114 (131)
-|+.-+.+-.+ .|+++||. ++ ..|-+.-=+.+++.++++.+.++|+
T Consensus 52 Gdl~gi~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~Gi 131 (683)
T 3bmv_A 52 GDWQGIINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNI 131 (683)
T ss_dssp CCHHHHHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCC
Confidence 47776666677 78888884 22 1222233468899999999999999
Q ss_pred eEEEE
Q 032873 115 KIIIV 119 (131)
Q Consensus 115 ~ViIA 119 (131)
+||+=
T Consensus 132 kVilD 136 (683)
T 3bmv_A 132 KVIID 136 (683)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99973
No 380
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=34.08 E-value=1.5e+02 Score=22.44 Aligned_cols=36 Identities=28% Similarity=0.192 Sum_probs=25.3
Q ss_pred CCeEEEEeccCC----C----HHHHHHHHHHHHHhCCCeeEEEE
Q 032873 58 APIVGIIMESDL----D----LPVMNDAARTLSDFGVPYEIKIL 93 (131)
Q Consensus 58 ~~~V~IimGS~S----D----l~~~~ka~~~L~~fGI~~ev~V~ 93 (131)
..+|.||.||.. + ...++.+.+.|++-|..+++.-+
T Consensus 25 M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 25 MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp CCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred CcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 358999999983 3 35567777788887876655444
No 381
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=33.94 E-value=34 Score=27.81 Aligned_cols=57 Identities=18% Similarity=0.102 Sum_probs=39.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
..|+||=+|.. +.+.++..|...| . +|+..|+.++.+.++++. ++++|++.|...-+
T Consensus 160 k~vvVIG~s~i---VG~p~A~lL~~~g--A--tVtv~hs~t~~L~~~~~~-----ADIVI~Avg~p~lI 216 (288)
T 1b0a_A 160 LNAVVIGASNI---VGRPMSMELLLAG--C--TTTVTHRFTKNLRHHVEN-----ADLLIVAVGKPGFI 216 (288)
T ss_dssp CEEEEECCCTT---THHHHHHHHHTTT--C--EEEEECSSCSCHHHHHHH-----CSEEEECSCCTTCB
T ss_pred CEEEEECCChH---HHHHHHHHHHHCC--C--eEEEEeCCchhHHHHhcc-----CCEEEECCCCcCcC
Confidence 35666654432 3566777887777 3 444469999888888764 69999999976544
No 382
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=33.93 E-value=1.7e+02 Score=23.03 Aligned_cols=63 Identities=16% Similarity=0.089 Sum_probs=39.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------------CCCChHHHHHH
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--------------------------------PHQNCKEALSY 105 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S--------------------------------AHRtp~~~~~~ 105 (131)
..++++|+|..+ -+...+++.|-+-|.. +.+++ =-+.++.+.++
T Consensus 44 ~gk~vlVTGas~--GIG~aia~~La~~Ga~--Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 44 AGCTVFITGASR--GIGKAIALKAAKDGAN--IVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHTTTCE--EEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCh--HHHHHHHHHHHHCCCE--EEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 357999999887 4556666666666642 33322 12345556666
Q ss_pred HHHHhh--CCCeEEEEecCcC
Q 032873 106 ALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 106 ~~~~~~--~g~~ViIA~AG~a 124 (131)
++...+ .+++++|-.||..
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 654433 3789999999864
No 383
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=33.87 E-value=1.3e+02 Score=21.67 Aligned_cols=63 Identities=6% Similarity=-0.156 Sum_probs=38.8
Q ss_pred CeEEEEe----ccCCC---HHHHHHHHHHHHHhCCCeeEE-EEcCCCCh----HHHHHHHHHHhhCCCeEEEEecCc
Q 032873 59 PIVGIIM----ESDLD---LPVMNDAARTLSDFGVPYEIK-ILPPHQNC----KEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~Iim----GS~SD---l~~~~ka~~~L~~fGI~~ev~-V~SAHRtp----~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
.+|+++. |.... ..-.+-..+.|++.|+++++. +....-++ +.+.++++. ...++.|+|....
T Consensus 136 ~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~ai~~~~d~ 210 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHADLNIEDSRMLDDFFRE--HPDVKHGITFNSK 210 (304)
T ss_dssp SEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSSCHHHHHHHHHHH--CTTCCEEEESSSC
T ss_pred CeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHHHHHHHHHHHHHh--CCCeEEEEEcCcc
Confidence 5899999 44333 344556677888999987654 32333333 344444432 2358999998776
No 384
>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*
Probab=33.82 E-value=44 Score=23.34 Aligned_cols=25 Identities=24% Similarity=0.192 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCC
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPH 96 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAH 96 (131)
+.+.++.-+|+..||+|+...+...
T Consensus 12 ~~~~~v~~~L~~~gi~~e~~~v~~~ 36 (214)
T 2v6k_A 12 GTSHRLRIALNLKGVPYEYLAVHLG 36 (214)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTT
T ss_pred CcHHHHHHHHHHCCCCceEEecCCC
Confidence 6889999999999999999888753
No 385
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=33.81 E-value=1.4e+02 Score=21.98 Aligned_cols=61 Identities=20% Similarity=0.091 Sum_probs=38.1
Q ss_pred eEEEEeccCCC---H--HHHHHHHHHHHH-------hCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 60 IVGIIMESDLD---L--PVMNDAARTLSD-------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 60 ~V~IimGS~SD---l--~~~~ka~~~L~~-------fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
+|+++.-.... + ...+.+...+++ .|.++++.+....-.|++..+.++..-++++..+|..
T Consensus 4 ~IG~~~p~~g~~~~~~~~~~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~ 76 (346)
T 1usg_A 4 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGH 76 (346)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEEEeCCCCcchhcCHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcC
Confidence 56666643222 1 234444445565 5677777777777788877777766656778877753
No 386
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=33.37 E-value=88 Score=19.47 Aligned_cols=57 Identities=12% Similarity=0.139 Sum_probs=33.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCC---eeEEEEcCCCC-hHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVP---YEIKILPPHQN-CKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~---~ev~V~SAHRt-p~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.++. .+.=+.|+++...|+++|++ |+..=+..+.. ++...++.+....+++ .+||
T Consensus 13 ~v~~f~--~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~ 74 (105)
T 1kte_A 13 KVVVFI--KPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVFI 74 (105)
T ss_dssp CEEEEE--CSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred CEEEEE--cCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEE
Confidence 355554 34558999999999999999 66544443322 2322334444444444 5554
No 387
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=33.37 E-value=88 Score=23.38 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
+.+.+++..+.++++|+|+.+..- +.++++.++++.......++++
T Consensus 118 q~~~f~~~~~~a~~~~lPv~iH~~---~~~~~~~~il~~~p~~~~~~I~ 163 (268)
T 1j6o_A 118 QKRVFVEQIELAGKLNLPLVVHIR---DAYSEAYEILRTESLPEKRGVI 163 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE---SCHHHHHHHHHHSCCCSSCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeC---chHHHHHHHHHhcCCCCCCEEE
Confidence 456778888999999999998876 4677888887654311345555
No 388
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=33.34 E-value=1.4e+02 Score=21.86 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=14.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFG 85 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fG 85 (131)
.++++|+|..+ -+...+++.|-+-|
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G 31 (262)
T 1zem_A 7 GKVCLVTGAGG--NIGLATALRLAEEG 31 (262)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCC
Confidence 45777777766 34455555555555
No 389
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=33.16 E-value=1.6e+02 Score=22.30 Aligned_cols=65 Identities=9% Similarity=0.097 Sum_probs=40.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCChHHHHHHHHHHhh--C
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP------------------------PHQNCKEALSYALSAKE--R 112 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S------------------------AHRtp~~~~~~~~~~~~--~ 112 (131)
.++++|+|..|..-+...+++.|-+-|-. +.+++ =-..++.+.++++...+ .
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999999987555666677777666643 22221 12334555555544432 3
Q ss_pred CCeEEEEecCcCC
Q 032873 113 GIKIIIVGDGVEA 125 (131)
Q Consensus 113 g~~ViIA~AG~aA 125 (131)
+++++|-.||...
T Consensus 108 ~iD~lVnnAG~~~ 120 (296)
T 3k31_A 108 SLDFVVHAVAFSD 120 (296)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6899999998753
No 390
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=33.11 E-value=71 Score=24.00 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHH
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEA 102 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~ 102 (131)
=+.+.++.-.|+..||+|+...+.....|+.+
T Consensus 35 ~p~~~rv~~~L~~~gi~ye~~~v~~~~~~~~~ 66 (267)
T 2ahe_A 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADL 66 (267)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEEECTTSCCHHH
T ss_pred CchHHHHHHHHHHcCCCCEEEEeCcccChHHH
Confidence 48899999999999999998888754334433
No 391
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.07 E-value=1e+02 Score=22.31 Aligned_cols=65 Identities=8% Similarity=0.021 Sum_probs=36.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCChHHHHHHHHHHh
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--------------------------PHQNCKEALSYALSAK 110 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S--------------------------AHRtp~~~~~~~~~~~ 110 (131)
.+.++++|+|..+- +...+++.|-+-|.. +.++. =-..++.+.++++...
T Consensus 11 ~~~k~vlITGas~g--iG~~ia~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 11 MSQRIAYVTGGMGG--IGTSICQRLHKDGFR--VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp --CEEEEETTTTSH--HHHHHHHHHHHTTEE--EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh--HHHHHHHHHHHCCCE--EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 34678899998874 456666666666643 32221 0123344455554332
Q ss_pred h--CCCeEEEEecCcCC
Q 032873 111 E--RGIKIIIVGDGVEA 125 (131)
Q Consensus 111 ~--~g~~ViIA~AG~aA 125 (131)
+ .+++++|-.||...
T Consensus 87 ~~~g~id~lv~~Ag~~~ 103 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITR 103 (256)
T ss_dssp HHTCCEEEEEECCCCCC
T ss_pred HhcCCCCEEEECCCCCC
Confidence 2 25789999888653
No 392
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=33.07 E-value=54 Score=26.75 Aligned_cols=57 Identities=12% Similarity=0.006 Sum_probs=39.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
..|+||=+|.. +.+.++..|...|- . |+..|+.++.+.++++ .++++|++.|...-+
T Consensus 166 k~vvVIG~s~i---VG~p~A~lL~~~gA--t--Vtv~hs~t~~L~~~~~-----~ADIVI~Avg~p~~I 222 (301)
T 1a4i_A 166 RHAVVVGRSKI---VGAPMHDLLLWNNA--T--VTTCHSKTAHLDEEVN-----KGDILVVATGQPEMV 222 (301)
T ss_dssp CEEEEECCCTT---THHHHHHHHHHTTC--E--EEEECTTCSSHHHHHT-----TCSEEEECCCCTTCB
T ss_pred CEEEEECCCch---HHHHHHHHHHhCCC--e--EEEEECCcccHHHHhc-----cCCEEEECCCCcccC
Confidence 35666655533 56778888888773 3 4445888888877764 479999999985433
No 393
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=32.97 E-value=1.5e+02 Score=22.11 Aligned_cols=40 Identities=10% Similarity=0.140 Sum_probs=26.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~ 104 (131)
.++++|+|..+ -+...+++.|-+-|. ++.++ -|.++.+.+
T Consensus 29 ~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~~--~r~~~~~~~ 68 (276)
T 2b4q_A 29 GRIALVTGGSR--GIGQMIAQGLLEAGA--RVFIC--ARDAEACAD 68 (276)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--CSCHHHHHH
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHH
Confidence 57899999987 556677777777774 44443 355555443
No 394
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=32.96 E-value=76 Score=21.63 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=34.6
Q ss_pred eEEEEeccCCCHHHHHHH-HHHHHHhC---CCeeEEEEcCCCC-hHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDA-ARTLSDFG---VPYEIKILPPHQN-CKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka-~~~L~~fG---I~~ev~V~SAHRt-p~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|.+. +.=|.|+++ ...|+++| ++|+..=+..... ++...++.+....+.+ .|||
T Consensus 38 ~Vvvy~~--~~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi 100 (129)
T 3ctg_A 38 EVFVAAK--TYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYI 100 (129)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEC--CCCCchHHHHHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEE
Confidence 4666643 455899999 99999999 9887665554433 2223334433333333 5555
No 395
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=32.86 E-value=67 Score=22.52 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=25.0
Q ss_pred EEeccC-CCHHHHHHHHHHHHHhCCCeeEEEEcCC
Q 032873 63 IIMESD-LDLPVMNDAARTLSDFGVPYEIKILPPH 96 (131)
Q Consensus 63 IimGS~-SDl~~~~ka~~~L~~fGI~~ev~V~SAH 96 (131)
.+-+.. +--+.+.++.-+|+..||+|+...+...
T Consensus 8 ~Ly~~~~~~s~~~~~v~~~l~~~gi~~e~~~v~~~ 42 (215)
T 3bby_A 8 TLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLD 42 (215)
T ss_dssp EEEEETTSCCHHHHHHHHHHHHHTCCCEEEEEC--
T ss_pred EEEecCCCCCcHHHHHHHHHHHcCCCCEEEEecCc
Confidence 344443 2347899999999999999999888753
No 396
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=32.83 E-value=1.4e+02 Score=21.65 Aligned_cols=64 Identities=11% Similarity=0.038 Sum_probs=39.5
Q ss_pred CeEEEEeccCCCHHH---HHHHHHHHHHhCCCeeEE-EEcCCCChHHHHHHHHHH-hh---CCCeEEEEecC
Q 032873 59 PIVGIIMESDLDLPV---MNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA-KE---RGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl~~---~~ka~~~L~~fGI~~ev~-V~SAHRtp~~~~~~~~~~-~~---~g~~ViIA~AG 122 (131)
.+|++|.|....... .+-..+.|++.|++++.. +....-+++...+.++.. .. ..++.|++...
T Consensus 141 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d 212 (309)
T 2fvy_A 141 IQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANND 212 (309)
T ss_dssp EEEEEEECSTTCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTCHHHHHHHHHHHHTSTTGGGCCEEEESSH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHHhcCCceEEEEEecCCCCHHHHHHHHHHHHHhCCCCCccEEEECCc
Confidence 368999987655433 344557788899987643 434444666555555433 22 25888888654
No 397
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=32.73 E-value=1.4e+02 Score=21.94 Aligned_cols=61 Identities=11% Similarity=0.050 Sum_probs=34.6
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~--~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|++|.+. ++.. ..+...+.|++.|++......-. .........++.....+.++|++..
T Consensus 139 ~~i~~i~~~-~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~d~~~~~~~l~~~~~d~i~~~~ 201 (346)
T 1usg_A 139 QRIAIIHDK-QQYGEGLARSVQDGLKAANANVVFFDGIT-AGEKDFSALIARLKKENIDFVYYGG 201 (346)
T ss_dssp SSEEEEECS-SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTCCCCHHHHHHHHHTTCCEEEEES
T ss_pred CeEEEEECC-CchHHHHHHHHHHHHHHcCCEEEEEeccC-CCCcCHHHHHHHHHhcCCCEEEEcC
Confidence 479999874 3332 34455677888999865432211 1222223444444455688888765
No 398
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=32.72 E-value=84 Score=23.28 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=42.0
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCee---EEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYE---IKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~~e---v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|+..+ ++|-+|--.|--..+++ +...++.+||..
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la---~~~~yDavIaLG 79 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALG---KSGKYHAIVCLG 79 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHH---HTTCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHH---hcCCCCEEEEec
Confidence 5799999998887 677889999999998622 44555544444443333 345689998853
No 399
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.66 E-value=1.3e+02 Score=21.77 Aligned_cols=47 Identities=9% Similarity=0.076 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCC--------hHHHHHHHHHHhhCCCeEEE
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQN--------CKEALSYALSAKERGIKIII 118 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRt--------p~~~~~~~~~~~~~g~~ViI 118 (131)
...++++.+.++.+|.++-+ +.+.... -+.+.++.+.+++.|+++.|
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~-~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~ 138 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALV-LCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLV 138 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEE-ECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEE-EccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 35567777777888887633 3332222 33344555666667766554
No 400
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=32.62 E-value=1.6e+02 Score=22.28 Aligned_cols=26 Identities=8% Similarity=0.064 Sum_probs=17.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|.
T Consensus 31 gk~vlVTGas~g--IG~~la~~l~~~G~ 56 (301)
T 3tjr_A 31 GRAAVVTGGASG--IGLATATEFARRGA 56 (301)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCH--HHHHHHHHHHHCCC
Confidence 468888888874 45556666666663
No 401
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=32.60 E-value=1e+02 Score=23.82 Aligned_cols=29 Identities=17% Similarity=-0.080 Sum_probs=23.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP 87 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~ 87 (131)
.+|++|+|..|+--+...+++.|-+-|..
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~ 30 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK 30 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE
Confidence 37999999877666788888888888854
No 402
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=32.58 E-value=1.9e+02 Score=23.16 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=39.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|.|+--++...+.+.+.+..|.+.|+.+++.-. -+++.+-. +++...|+...|.+
T Consensus 299 ~~v~vi~~~~~~~~~a~~l~~~Lr~~Gi~v~~d~~--~~~~~~k~---~~A~~~g~p~~iii 355 (401)
T 1evl_A 299 VQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLR--NEKIGFKI---REHTLRRVPYMLVC 355 (401)
T ss_dssp SCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEECC--SSCHHHHH---HHHHHTTCSEEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHHHHHCCCEEEEECC--CCCHHHHH---HHHHhcCCCEEEEE
Confidence 46777766677788999999999999999887642 24454444 44556777665544
No 403
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.55 E-value=1.1e+02 Score=22.21 Aligned_cols=47 Identities=15% Similarity=-0.058 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
...++..+.|++.|+.+...-...-+..+.+.+.++.++.-|++.++
T Consensus 61 ~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~ 107 (257)
T 3lmz_A 61 EQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIV 107 (257)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEE
Confidence 33444455555555533211111113444455555555444454444
No 404
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=32.51 E-value=1.1e+02 Score=23.34 Aligned_cols=49 Identities=10% Similarity=0.159 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEE--cC-CCCh----------------HHHHHHHHHHhhCCCeEEEEe
Q 032873 71 LPVMNDAARTLSDFGVPYEIKIL--PP-HQNC----------------KEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~--SA-HRtp----------------~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+.+++-.+.++++|+++ +|+- .. ...| +.+.++++.+.+.|++|++..
T Consensus 44 ~~~~~~d~~~~k~~G~N~-vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 44 KSTFESTLSDMQSHGGNS-VRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHcCCCE-EEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 677888889999999984 4543 11 1112 367788889999999999975
No 405
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=32.42 E-value=1.4e+02 Score=21.57 Aligned_cols=22 Identities=27% Similarity=0.255 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhCCCeeEEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKIL 93 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~ 93 (131)
..++++.+.|++.|++++..+.
T Consensus 199 ~~l~~~~~~l~~~~~~~~~~~~ 220 (268)
T 3ab8_A 199 AWALEAEAYLRDHGVEASALVL 220 (268)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCceEEEEe
Confidence 3444555555555666555554
No 406
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=32.38 E-value=63 Score=23.53 Aligned_cols=34 Identities=18% Similarity=0.077 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~ 104 (131)
-+.+.++.-+|+..||+|++..+..-..++++.+
T Consensus 35 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~ 68 (246)
T 3rbt_A 35 NPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRA 68 (246)
T ss_dssp CHHHHHHHHHHHHTTBCEEEEECCSSSCCHHHHH
T ss_pred CccHHHHHHHHHHcCCCceEEEeCcccCCHHHHH
Confidence 3789999999999999999988876655554443
No 407
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=32.35 E-value=1.4e+02 Score=21.51 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=16.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 9 ~k~vlITGas~--giG~~~a~~l~~~G~ 34 (253)
T 3qiv_A 9 NKVGIVTGSGG--GIGQAYAEALAREGA 34 (253)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 46888888876 345555666655563
No 408
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=32.24 E-value=31 Score=28.29 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=21.8
Q ss_pred CCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 96 HQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 96 HRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
+=|.+++.+++++|+.+|++||--+
T Consensus 91 ~YT~~di~eiv~YA~~rgI~VIPEI 115 (367)
T 1yht_A 91 FLSYRQLDDIKAYAKAKGIELIPEL 115 (367)
T ss_dssp EBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEec
Confidence 3589999999999999999998544
No 409
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*
Probab=32.20 E-value=49 Score=24.00 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChH
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNCK 100 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~ 100 (131)
-+.+.++.-+|+..||+|+...+..++.|+
T Consensus 12 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~ 41 (242)
T 3ubk_A 12 SNYVNKVKLGILEKGLEYEQIRIAPSQEED 41 (242)
T ss_dssp CHHHHHHHHHHHHHTCCEEEECCCCCCCHH
T ss_pred ChHHHHHHHHHHHcCCCcEEEecCCccCHH
Confidence 377889999999999999988776665554
No 410
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=32.08 E-value=82 Score=22.08 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCC
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQ 97 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHR 97 (131)
+.++++.-.|+..||+|++..+....
T Consensus 10 ~~~~~v~~~L~~~gi~ye~~~v~~~~ 35 (219)
T 3f6d_A 10 APCRAVQMTAAAVGVELNLKLTNLMA 35 (219)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTT
T ss_pred CchHHHHHHHHHcCCCceEEEccCcc
Confidence 67889999999999999998886554
No 411
>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}
Probab=31.95 E-value=63 Score=23.21 Aligned_cols=25 Identities=24% Similarity=0.025 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcC
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPP 95 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SA 95 (131)
-+.+.++.-+|+..||+|+...+..
T Consensus 31 sp~~~~vr~~L~~~gi~~e~~~v~~ 55 (230)
T 4hz2_A 31 SGNCWKAAQILSLTGHDFEWVETSS 55 (230)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCS
T ss_pred CccHHHHHHHHHHcCCCceEEEecC
Confidence 3789999999999999999988875
No 412
>2vs7_A I-DMOI, homing endonuclease I-DMOI; protein/nucleic acid crystallography; 2.05A {Desulfurococcus mobilis} PDB: 2vs8_A 1b24_A
Probab=31.66 E-value=41 Score=25.00 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=22.4
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeEEE
Q 032873 67 SDLDLPVMNDAARTLSDFGVPYEIKI 92 (131)
Q Consensus 67 S~SDl~~~~ka~~~L~~fGI~~ev~V 92 (131)
+.+|.+.++.+...|.+|||...+..
T Consensus 128 ~s~s~~ll~~v~~lL~~lGI~s~i~~ 153 (199)
T 2vs7_A 128 WNKNKALLEIVSRWLNNLGVRNTIHL 153 (199)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EECcHHHHHHHHHHHHHCCCeEEEEE
Confidence 46889999999999999999976543
No 413
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=31.58 E-value=78 Score=27.54 Aligned_cols=24 Identities=25% Similarity=0.300 Sum_probs=20.6
Q ss_pred CCChHHHHHHHHHHhhCCCeEEEE
Q 032873 96 HQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 96 HRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-=+.+++.++++.+.++|++||+=
T Consensus 108 ~Gt~~df~~Lv~~aH~~GIkVilD 131 (680)
T 1cyg_A 108 FGTLSDFQRLVDAAHAKGIKVIID 131 (680)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEE
Confidence 346889999999999999999973
No 414
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=31.57 E-value=82 Score=23.02 Aligned_cols=30 Identities=13% Similarity=0.146 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcC-CCChH
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPP-HQNCK 100 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SA-HRtp~ 100 (131)
=|.+.++.-+|+..||+|+...+.. |+.|+
T Consensus 24 sp~~~rv~~~L~~~gi~ye~~~v~~~~~~~~ 54 (241)
T 1k0m_A 24 CPFSQRLFMVLWLKGVTFNVTTVDTKRRTET 54 (241)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEEECTTSCCHH
T ss_pred CHHHHHHHHHHHHcCCccEEEEcCCcccHHH
Confidence 4889999999999999999888764 44443
No 415
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=31.55 E-value=1.1e+02 Score=23.59 Aligned_cols=51 Identities=10% Similarity=0.207 Sum_probs=37.0
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCeeEEEE-cCCCChHHHHHHHHHHhhCCCeE
Q 032873 66 ESDLDLPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKI 116 (131)
Q Consensus 66 GS~SDl~~~~ka~~~L~~fGI~~ev~V~-SAHRtp~~~~~~~~~~~~~g~~V 116 (131)
|...+++.+.++.+.|.+.|+++.+.++ ...-+.+++.++++.+.+.|+++
T Consensus 140 ~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~~g~n~~ei~~~~~~~~~~g~~~ 191 (340)
T 1tv8_A 140 NRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEI 191 (340)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCEEEEEEEECTTTTGGGHHHHHHHHHHTTCCE
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEEeCCCCHHHHHHHHHHHHhcCCeE
Confidence 4333688888888888889987666554 22337788888888888888864
No 416
>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0
Probab=31.38 E-value=1.8e+02 Score=25.93 Aligned_cols=52 Identities=13% Similarity=0.270 Sum_probs=37.0
Q ss_pred CCCHHHHHHHH-------HHHHHhCCCeeEEEEcCCC-ChHHHHHHHHHHhhCCCeEEEE
Q 032873 68 DLDLPVMNDAA-------RTLSDFGVPYEIKILPPHQ-NCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 68 ~SDl~~~~ka~-------~~L~~fGI~~ev~V~SAHR-tp~~~~~~~~~~~~~g~~ViIA 119 (131)
.-|++-+++.. +-+++||+|+-+-|-...- |.+++.-+.+.+++.|+.+.++
T Consensus 336 ~enl~al~~G~~NL~kHIen~~~fGvpvVVaiN~F~tDT~aEi~~v~~~~~~~G~~~~~s 395 (543)
T 3do6_A 336 EENLEALKEGFKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEKLGVRVAVS 395 (543)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHcCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 45676655544 4456899999999886443 5566666668888999988775
No 417
>2z0x_A Putative uncharacterized protein TTHA1699; protein-cyssa complex, translation, structural genomics, NPPSFA; HET: 5CA; 1.64A {Thermus thermophilus} PDB: 2z0k_A* 2cx5_A* 3rij_A 3ri0_A
Probab=31.36 E-value=42 Score=23.52 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCe-eEEEEcC-CCChHHHHHHHHHHhhCCCeEEE
Q 032873 74 MNDAARTLSDFGVPY-EIKILPP-HQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 74 ~~ka~~~L~~fGI~~-ev~V~SA-HRtp~~~~~~~~~~~~~g~~ViI 118 (131)
++++.+.|++.||+| +..-... -+|-+++.++..-..++-+|-++
T Consensus 7 ~~~~~~~L~~~~i~~~~~~~~p~~~~t~~e~a~~lg~~~~~~~Ktlv 53 (158)
T 2z0x_A 7 ARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLV 53 (158)
T ss_dssp HHHHHHHHHHTTCTTSCEEECSSCCSSHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHcCCCCCEEEEcCCCCCCHHHHHHHcCCCHHHEEEEEE
Confidence 478999999999999 8766553 45677776666332333344433
No 418
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=31.29 E-value=1.1e+02 Score=22.80 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=42.5
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC-ee-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVP-YE-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl---~~~~ka~~~L~~fGI~-~e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
.+|+|+.+.-.+. .-.+.|.+.|++.|+. ++ ++|-+|--.|--..++++ .++.+||.
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaL 79 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVAL 79 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEE
Confidence 5799999998888 7788899999999984 33 456667666655544442 48888875
No 419
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=31.27 E-value=62 Score=26.21 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEE------cCCC---------------------ChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKIL------PPHQ---------------------NCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~------SAHR---------------------tp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++|+..- .+. +.|+ +.+++.++++.+.++|++|++=
T Consensus 27 G~~~~i~~~l~yl~~lG~~~i-~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D 103 (449)
T 3dhu_A 27 GNFAGVTADLQRIKDLGTDIL-WLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLD 103 (449)
T ss_dssp CSHHHHHTTHHHHHHHTCSEE-EECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHhHHHHHHcCCCEE-EECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 477777777789999998622 222 2232 5689999999999999999873
No 420
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=31.18 E-value=1.7e+02 Score=22.38 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=29.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCe-eEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPY-EIKI 92 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~-ev~V 92 (131)
.+|..|+..+-|++...+.++.|.+.|+.. |+.+
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~ 52 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC
Confidence 579999999999999999999999998874 6655
No 421
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=31.18 E-value=33 Score=27.79 Aligned_cols=56 Identities=25% Similarity=0.251 Sum_probs=37.0
Q ss_pred eEEEEec-cCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 60 IVGIIME-SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 60 ~V~IimG-S~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
+=+++.| |. -+.+.++..|...|. +|+..||..+.+.++++ .++++|++.|...-+
T Consensus 161 k~vvVvGrs~---iVG~p~A~lL~~~gA----tVtv~h~~t~~L~~~~~-----~ADIVI~Avg~p~~I 217 (285)
T 3p2o_A 161 KDAVIIGASN---IVGRPMATMLLNAGA----TVSVCHIKTKDLSLYTR-----QADLIIVAAGCVNLL 217 (285)
T ss_dssp CEEEEECCCT---TTHHHHHHHHHHTTC----EEEEECTTCSCHHHHHT-----TCSEEEECSSCTTCB
T ss_pred CEEEEECCCc---hHHHHHHHHHHHCCC----eEEEEeCCchhHHHHhh-----cCCEEEECCCCCCcC
Confidence 4445555 42 245666777777765 35556888888877764 479999999965433
No 422
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=31.17 E-value=1e+02 Score=26.59 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHhCCCe--------------------e-EEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 69 LDLPVMNDAARTLSDFGVPY--------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~--------------------e-v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
-|+.-+.+-...|+++||.. + ..|-+..=+++++.++++.+.++|++||+=+
T Consensus 141 G~~~gi~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~ 213 (602)
T 2bhu_A 141 GTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDV 213 (602)
T ss_dssp CSHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 48877777779999999951 1 2344444579999999999999999999744
No 423
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=31.12 E-value=1.3e+02 Score=23.41 Aligned_cols=63 Identities=17% Similarity=0.103 Sum_probs=35.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC---------------------CeeEEEEcCCCChHHHHHHHHHHhh--CCCe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV---------------------PYEIKILPPHQNCKEALSYALSAKE--RGIK 115 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI---------------------~~ev~V~SAHRtp~~~~~~~~~~~~--~g~~ 115 (131)
.||++|+|+.|- +.+.+++.|-+-|- .+.. +..=-..++.+.++++...+ ..++
T Consensus 29 gKvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~-~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 29 AKIAVITGATSG--IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG-IQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEE-EECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CCEEEEeCcCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEE-EEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999884 34445555544443 2211 11223445555555544322 3467
Q ss_pred EEEEecCcC
Q 032873 116 IIIVGDGVE 124 (131)
Q Consensus 116 ViIA~AG~a 124 (131)
++|.-||..
T Consensus 106 iLVNNAG~~ 114 (273)
T 4fgs_A 106 VLFVNAGGG 114 (273)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 788777764
No 424
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=31.05 E-value=1.6e+02 Score=21.86 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=36.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------------------HHHHHHHHHHhh--
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC------------------------KEALSYALSAKE-- 111 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp------------------------~~~~~~~~~~~~-- 111 (131)
..++++|+|..+- +...+++.|-+-|. .+.++ -|.+ +.+.++++...+
T Consensus 26 ~gk~vlVTGas~g--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGG--IGEAIARCFHAQGA--IVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 3679999999884 45566666666663 22222 2333 444444433322
Q ss_pred CCCeEEEEecCcC
Q 032873 112 RGIKIIIVGDGVE 124 (131)
Q Consensus 112 ~g~~ViIA~AG~a 124 (131)
.+++++|-.||..
T Consensus 100 g~iD~lvnnAg~~ 112 (266)
T 3grp_A 100 EGIDILVNNAGIT 112 (266)
T ss_dssp TSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3688999888864
No 425
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=31.00 E-value=1.3e+02 Score=25.67 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHHhCCCee-----------------------EEEEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPYE-----------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~e-----------------------v~V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||..- ..|-+--=+.+++.++++.+.++|++||+=
T Consensus 145 Gdl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 218 (601)
T 3edf_A 145 GDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQD 218 (601)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 468877888889999999521 133333446789999999999999999974
No 426
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=30.97 E-value=2e+02 Score=23.19 Aligned_cols=52 Identities=12% Similarity=0.160 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcC----CC----------C--------hHHHHHHHHHHhhCCCeEEEEec
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPP----HQ----------N--------CKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SA----HR----------t--------p~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.|.+.+++-.+.++++|+++ +|+... |. . -+.+..++..+.+.|++||+..-
T Consensus 59 ~~~~~~~~dl~~~k~~G~N~-vR~~~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 59 GDRDRLAKELDNLKAIGVNN-LRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp CCHHHHHHHHHHHHHTTCCE-EEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCE-EEECcccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 47888999999999999984 676511 21 1 24455778889999999999753
No 427
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=30.96 E-value=86 Score=23.66 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=18.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
..++++|+|..+ -+...+++.|-+-|-
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (281)
T 4dry_A 32 EGRIALVTGGGT--GVGRGIAQALSAEGY 58 (281)
T ss_dssp --CEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 357899999887 455666667766664
No 428
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=30.81 E-value=1.5e+02 Score=21.79 Aligned_cols=54 Identities=11% Similarity=-0.097 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC----------------CC-------hHHHHHHHHHHhhCCCeEEEEecCc
Q 032873 70 DLPVMNDAARTLSDFGVPYEIKILPPH----------------QN-------CKEALSYALSAKERGIKIIIVGDGV 123 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~V~SAH----------------Rt-------p~~~~~~~~~~~~~g~~ViIA~AG~ 123 (131)
|....++..+.|++.|+.+...-.+.+ -. -+.+.+.++.++.-|++.++..+|.
T Consensus 49 ~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~ 125 (290)
T 3tva_A 49 TREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGF 125 (290)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 456788889999999996554322211 01 1456667777888889888887763
No 429
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=30.74 E-value=32 Score=27.21 Aligned_cols=30 Identities=13% Similarity=0.226 Sum_probs=17.9
Q ss_pred CCeEEEEeccCC---C--HHHHHHHHHHHHHhCCC
Q 032873 58 APIVGIIMESDL---D--LPVMNDAARTLSDFGVP 87 (131)
Q Consensus 58 ~~~V~IimGS~S---D--l~~~~ka~~~L~~fGI~ 87 (131)
.+.|+|.-||.. . .+...+.++.|.+-|..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~ 219 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYK 219 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCe
Confidence 356777777632 2 34666777766555543
No 430
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5
Probab=30.72 E-value=76 Score=22.51 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC-CCCh
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP-HQNC 99 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA-HRtp 99 (131)
+.+.++.-+|+..||+|+...+.. |+.|
T Consensus 16 p~~~~v~~~L~~~gi~~e~~~v~~~~~~~ 44 (230)
T 1gwc_A 16 PFVTRVKLALALKGLSYEDVEEDLYKKSE 44 (230)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCH
T ss_pred hHHHHHHHHHHHcCCCCeEEecccccCCH
Confidence 688999999999999999888764 4443
No 431
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=30.62 E-value=58 Score=26.20 Aligned_cols=61 Identities=8% Similarity=-0.110 Sum_probs=40.7
Q ss_pred EEEEeccCCCHHH--------------HHHHHHHHHHhCCCeeEEEEcCCCC-hHHHHHHHHHHhhCCCeEEEEecC
Q 032873 61 VGIIMESDLDLPV--------------MNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 61 V~IimGS~SDl~~--------------~~ka~~~L~~fGI~~ev~V~SAHRt-p~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
+.-+..|.||.-. +.++.+.+++.|..+.+.--.+.|+ |+.+.++++.+.+-|++. |..+.
T Consensus 97 ~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~-i~l~D 172 (325)
T 3eeg_A 97 RIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADV-VNIPD 172 (325)
T ss_dssp EEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSE-EECCB
T ss_pred EEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCE-EEecC
Confidence 3445667788743 4467777888888776665555555 566778888877778875 44443
No 432
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=30.55 E-value=49 Score=19.61 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHH
Q 032873 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEAL 103 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~ 103 (131)
+.=+.|+++...|++.|++|+..= .-..|+...
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~vd--i~~~~~~~~ 41 (81)
T 1h75_A 9 NDCVQCHATKRAMENRGFDFEMIN--VDRVPEAAE 41 (81)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEE--TTTCHHHHH
T ss_pred CCChhHHHHHHHHHHCCCCeEEEE--CCCCHHHHH
Confidence 345899999999999999987533 334555433
No 433
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=30.51 E-value=72 Score=24.67 Aligned_cols=62 Identities=10% Similarity=0.022 Sum_probs=37.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+||.-.+.-...++...+.+++.|+...... ..-.+...+..++...++.+.+|||...
T Consensus 129 ~~v~ii~d~~~g~~~~~~~~~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~ik~~~~~vii~~~ 190 (384)
T 3saj_A 129 QTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVN-ILTTTEEGYRMLFQDLEKKKERLVVVDC 190 (384)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHHHTCEEEEEE-GGGCCHHHHHHTTTTCCSCSEEEEEEEC
T ss_pred cEEEEEEeCchhHHHHHHHHHHhhhcCceEEEEE-eccCCchhHHHHHHHHhccCCcEEEEEc
Confidence 4688888333334556677777888888655544 2223444555566556666677766643
No 434
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=30.46 E-value=34 Score=27.69 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=38.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
.|+||=.|.. +.+.++..|...|.. -+|+..||.++.+.++++ .++++|++.|...-+
T Consensus 160 ~vvVvG~s~i---VG~p~A~lL~~~g~~--atVtv~h~~t~~L~~~~~-----~ADIVI~Avg~p~~I 217 (281)
T 2c2x_A 160 HVVVIGRGVT---VGRPLGLLLTRRSEN--ATVTLCHTGTRDLPALTR-----QADIVVAAVGVAHLL 217 (281)
T ss_dssp EEEEECCCTT---THHHHHHHHTSTTTC--CEEEEECTTCSCHHHHHT-----TCSEEEECSCCTTCB
T ss_pred EEEEECCCcH---HHHHHHHHHhcCCCC--CEEEEEECchhHHHHHHh-----hCCEEEECCCCCccc
Confidence 4555544432 456777777776322 345556999988888774 379999999976543
No 435
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=30.43 E-value=1.7e+02 Score=21.79 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=44.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---------------CCCChHHHHHHHHHHhh--CCCeEEEE
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---------------PHQNCKEALSYALSAKE--RGIKIIIV 119 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S---------------AHRtp~~~~~~~~~~~~--~g~~ViIA 119 (131)
...++++|+|..+ -+...+++.|-+-|-. +.+++ =-..++.+.++++...+ .+++++|-
T Consensus 12 ~~~k~vlVTGas~--GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 12 FTDKVAIVTGGSS--GIGLAVVDALVRYGAK--VVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTTCE--EEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4468999999998 5667788888777754 33322 12345667777655433 36899999
Q ss_pred ecCcCC
Q 032873 120 GDGVEA 125 (131)
Q Consensus 120 ~AG~aA 125 (131)
.||...
T Consensus 88 nAg~~~ 93 (269)
T 3vtz_A 88 NAGIEQ 93 (269)
T ss_dssp CCCCCC
T ss_pred CCCcCC
Confidence 999753
No 436
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=30.33 E-value=1.7e+02 Score=23.17 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=35.6
Q ss_pred eEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEc--CC----CCh-HHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILP--PH----QNC-KEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SD----l~~~~ka~~~L~~fGI~~ev~V~S--AH----Rtp-~~~~~~~~~~~~~g~~Vi 117 (131)
+|.+..|++.| +..++++.+.|+++|+|+-+-+.. .| ..| +.+.+-++.+.+-|++++
T Consensus 126 ~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~i 194 (304)
T 1to3_A 126 KLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLY 194 (304)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEE
T ss_pred EEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEE
Confidence 45555674321 266777788888889887776653 23 234 555555666666777765
No 437
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.31 E-value=1.6e+02 Score=21.63 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=17.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
..++++|+|..+- +...+++.|-+-|.
T Consensus 9 ~~k~vlVTGas~g--IG~aia~~l~~~G~ 35 (262)
T 3pk0_A 9 QGRSVVVTGGTKG--IGRGIATVFARAGA 35 (262)
T ss_dssp TTCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCC
Confidence 3578888888774 45556666666664
No 438
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=30.27 E-value=23 Score=25.69 Aligned_cols=29 Identities=3% Similarity=0.015 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCK 100 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~ 100 (131)
|.+.++.-+|.+.||+||+..+..-..++
T Consensus 32 P~~~rVr~~L~e~gi~~e~~~v~~~~~~~ 60 (225)
T 4glt_A 32 PYARKVRVVAAEKRIDVDMVLVVLADPEC 60 (225)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCSSS
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCCCH
Confidence 89999999999999999988877544444
No 439
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=30.25 E-value=81 Score=20.83 Aligned_cols=30 Identities=13% Similarity=0.373 Sum_probs=22.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEI 90 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev 90 (131)
+. ||..++-|-...++....|+..+|||..
T Consensus 36 ~l-ViiA~D~~~~~~~~i~~~c~~~~ip~~~ 65 (101)
T 3on1_A 36 TL-VILSSDAGIHTKKKLLDKCGSYQIPVKV 65 (101)
T ss_dssp SE-EEEETTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred cE-EEEeCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44 4555555556889999999999999864
No 440
>1no5_A Hypothetical protein HI0073; structural genomics, nucleotidyl transferase structure 2 function project, S2F, unknown function; 1.80A {Haemophilus influenzae} SCOP: d.218.1.5
Probab=30.20 E-value=1.2e+02 Score=20.09 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=34.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcCcC
Q 032873 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (131)
Q Consensus 57 ~~~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhLpG 129 (131)
+.-.++|+.....+.....+....|++++.++.+.++.....+..+. ......|. .|-....+=+-||
T Consensus 45 SDIDl~V~~~~~~~~~~~~~l~~~l~~~~~~~~vDlv~~~~~~~~~~---~~I~~eg~--~ly~~~~~~~~~~ 112 (114)
T 1no5_A 45 SDLDLAIISEEPLDFLARDRLKEAFSESDLPWRVDLLDWATTSEDFR---EIIRKVYV--VIQEKEKTVEKPT 112 (114)
T ss_dssp CCEEEEEECSSCCCHHHHHHHHHHHHHSCCSSCEEEEEGGGSCHHHH---HHHHHSCE--EEECCC-------
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHhcCCCCcEeEEEccCCCHHHH---HHHHhceE--EEEECCccccCCC
Confidence 33568888876666655566777788765555555555555554443 33334443 3334444444444
No 441
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=30.12 E-value=92 Score=23.00 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCC---------ChHHHHHHHHHHhhCCCeEEE
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQ---------NCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHR---------tp~~~~~~~~~~~~~g~~ViI 118 (131)
+..++++.+.++.+|.++-+-..+... .-+.+.++++.+++.|+++.|
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 467788888889999986543222111 112345555667777877654
No 442
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=29.99 E-value=1.5e+02 Score=23.75 Aligned_cols=57 Identities=18% Similarity=0.115 Sum_probs=37.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh--CCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDF--GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~f--GI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..|.|+.-+....+.+.+.++.|.+- |+.+++.-. .+++.+-.+++ ...|+..+|.+
T Consensus 328 ~~v~i~~~~~~~~~~a~~l~~~Lr~~~~Gi~v~~d~~--~~~~~~~~~~a---~~~g~p~~iii 386 (423)
T 1htt_A 328 VDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHG--GGNFKKQFARA---DKWGARVAVVL 386 (423)
T ss_dssp CSEEEEECSTTHHHHHHHHHHHHHHHSTTCCEEECCS--CCCHHHHHHHH---HHHTCSEEEEE
T ss_pred CcEEEEEcCHHHHHHHHHHHHHHHcCCCCcEEEEeCC--CCCHHHHHHHH---HHcCCCEEEEE
Confidence 45777764555678888888888888 998887542 25566655554 45667655544
No 443
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=29.90 E-value=36 Score=27.54 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEecCcCCcC
Q 032873 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (131)
Q Consensus 73 ~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~AG~aAhL 127 (131)
+.+.++..|...|. . |+..||....+.++++ .++++|++.|...-+
T Consensus 173 VG~p~A~lL~~~gA--t--Vtv~hs~t~~L~~~~~-----~ADIVI~Avg~p~~I 218 (285)
T 3l07_A 173 VGKPVSQLLLNAKA--T--VTTCHRFTTDLKSHTT-----KADILIVAVGKPNFI 218 (285)
T ss_dssp THHHHHHHHHHTTC--E--EEEECTTCSSHHHHHT-----TCSEEEECCCCTTCB
T ss_pred hHHHHHHHHHHCCC--e--EEEEeCCchhHHHhcc-----cCCEEEECCCCCCCC
Confidence 46677777887776 3 4456988877777663 479999999965433
No 444
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=29.88 E-value=1.6e+02 Score=21.27 Aligned_cols=62 Identities=16% Similarity=0.191 Sum_probs=39.1
Q ss_pred CeEEEEeccCCCHHH---HHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh---CCCeEEEEecC
Q 032873 59 PIVGIIMESDLDLPV---MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE---RGIKIIIVGDG 122 (131)
Q Consensus 59 ~~V~IimGS~SDl~~---~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~---~g~~ViIA~AG 122 (131)
.+|++|.|..++... .+-..+.|++.|++++ +....-+++...+.++..-. ..++.|+|...
T Consensus 119 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d 186 (277)
T 3cs3_A 119 KKVLLLSGPEKGYDSQERLAVSTRELTRFGIPYE--IIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFND 186 (277)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHHTTCCEE--EEECCSSHHHHHHHHHHHTTSCCCSSEEEEESSH
T ss_pred ceEEEEeCCccCccHHHHHHHHHHHHHHcCCCee--EEeCCCChhHHHHHHHHHHhcCCCCCcEEEEcCh
Confidence 579999988665433 3344567888999877 44444456655555544322 35788888654
No 445
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=29.80 E-value=1.7e+02 Score=21.54 Aligned_cols=34 Identities=15% Similarity=0.065 Sum_probs=22.6
Q ss_pred eEEEEeccCCC----HHHHHHHHHHHHHh-CCCeeEEEEcC
Q 032873 60 IVGIIMESDLD----LPVMNDAARTLSDF-GVPYEIKILPP 95 (131)
Q Consensus 60 ~V~IimGS~SD----l~~~~ka~~~L~~f-GI~~ev~V~SA 95 (131)
+|.||.||... ...++.+.+.|++- |+++ .+...
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v--~~~dl 41 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDI--SFRTP 41 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEE--EEECT
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeE--EEEEc
Confidence 79999999753 44556666677666 7654 44443
No 446
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.69 E-value=1.7e+02 Score=22.75 Aligned_cols=60 Identities=10% Similarity=0.135 Sum_probs=39.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---CCChHHHHHHHHH-HhhCCCeEEEEecCc
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---HQNCKEALSYALS-AKERGIKIIIVGDGV 123 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SA---HRtp~~~~~~~~~-~~~~g~~ViIA~AG~ 123 (131)
.+++.||... ++++.+.+-.+|..--+.|... |-.|..+.+.+.. .+..++++|++++..
T Consensus 59 V~av~~G~~~----~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s 122 (264)
T 1o97_C 59 VVVVSVGPDR----VDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQS 122 (264)
T ss_dssp EEEEEESCGG----GHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCC
T ss_pred EEEEEeCchh----HHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 6889999754 3344444445799877777542 4667776665533 344579999998755
No 447
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.68 E-value=1.8e+02 Score=21.80 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=17.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 29 ~k~~lVTGas~--GIG~aia~~la~~G~ 54 (280)
T 4da9_A 29 RPVAIVTGGRR--GIGLGIARALAASGF 54 (280)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCCC
Confidence 47888888877 445566666666664
No 448
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=29.55 E-value=1.5e+02 Score=28.05 Aligned_cols=86 Identities=9% Similarity=-0.040 Sum_probs=56.4
Q ss_pred eecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec--cCCCHHHHHHHHHHHHHhCCCeeEEEEcCC--
Q 032873 21 VLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME--SDLDLPVMNDAARTLSDFGVPYEIKILPPH-- 96 (131)
Q Consensus 21 Vt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG--S~SDl~~~~ka~~~L~~fGI~~ev~V~SAH-- 96 (131)
+.++++.++-++|..+...... + + . .--+.-.. +..+.+.+.+.++-+++.|||+++-++.-+
T Consensus 408 ~~G~tp~~Vv~~Yt~LTGrp~m----------p-P-~-WalG~wqsr~~Y~sq~ev~~va~~~re~gIPlDvi~lD~~y~ 474 (1020)
T 2xvl_A 408 VAGDTKDDIISGYRQLTGKSVM----------L-P-K-WAYGFWQSRERYKSSDEIIQNLKEYRDRKIPIDNIVLDWSYW 474 (1020)
T ss_dssp EECSSHHHHHHHHHHHHCCCCC----------C-C-G-GGGSEEECCTTCCSHHHHHHHHHHHHHTTCCCCEEEECSCCS
T ss_pred EeCCCHHHHHHHHHHHhCCCCC----------C-C-c-ceeceeeecCCCCCHHHHHHHHHHHHHcCCCcceEEEecccc
Confidence 4567888888888877633211 1 0 1 01122211 234677788888899999999999888742
Q ss_pred -------------CChHHHHHHHHHHhhCCCeEEEEe
Q 032873 97 -------------QNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 97 -------------Rtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
|-|+ ..+++++..++|.++++-+
T Consensus 475 ~~~~~~dFtwD~~rFPd-p~~mv~~Lh~~G~k~vl~V 510 (1020)
T 2xvl_A 475 PEDAWGSHDFDKQFFPD-PKALVDKVHAMNAQIMISV 510 (1020)
T ss_dssp CTTCTTSCCCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred ccCcccceEEChhhCCC-HHHHHHHHHHCCCEEEEEE
Confidence 3444 5677888888999987754
No 449
>1lng_A SRP19, signal recognition particle 19 kDa protein; protein-RNA complex, signaling protein/RNA complex; 2.30A {Methanocaldococcus jannaschii} SCOP: d.201.1.1 PDB: 2v3c_A 3ndb_A 1l9a_A*
Probab=29.51 E-value=21 Score=24.12 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=18.8
Q ss_pred CHHHHHHHHHHHHHhCCCeeEE
Q 032873 70 DLPVMNDAARTLSDFGVPYEIK 91 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~ 91 (131)
+-|.++++.++|+.+|+++.+.
T Consensus 27 ~~P~~~EI~~a~~~lgl~~~~E 48 (87)
T 1lng_A 27 EKPSLKDIEKALKKLGLEPKIY 48 (87)
T ss_dssp SSCCHHHHHHHHHHTTCCCEEE
T ss_pred cCCCHHHHHHHHHHcCCCeEEc
Confidence 4578899999999999999653
No 450
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=29.45 E-value=1.8e+02 Score=23.06 Aligned_cols=63 Identities=13% Similarity=0.080 Sum_probs=46.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHH-hCCCee---------------------EEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSD-FGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~-fGI~~e---------------------v~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
.-.+++|+-.+++++.+++--|++ ..|+.+ +-+.+-.++-+++.+.+++.+.+|.+|+
T Consensus 206 ~~~~~lG~G~~~~~A~E~ALKlkE~s~i~ae~~~~~E~~HGP~ali~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v~ 285 (344)
T 3fj1_A 206 PSLFTLGRGTSLAVSNEAALKFKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAAEAPLAEIADQIAAKGATVF 285 (344)
T ss_dssp CCEEEEECGGGHHHHHHHHHHHHHHHCCCEEEEETTTGGGSSSCHHHHTCCEEECCCSSTTHHHHHHHHHHHHHTTCCEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHHhccCceeecHHhhccchHhhhcCCceEEEEecCCchHHHHHHHHHHHHHcCCeEE
Confidence 355799999999999988866665 456433 3345556667788888888999999888
Q ss_pred EEecC
Q 032873 118 IVGDG 122 (131)
Q Consensus 118 IA~AG 122 (131)
+....
T Consensus 286 ~i~~~ 290 (344)
T 3fj1_A 286 ATTGR 290 (344)
T ss_dssp ESSTT
T ss_pred EEeCC
Confidence 76543
No 451
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=29.36 E-value=1.2e+02 Score=28.73 Aligned_cols=60 Identities=13% Similarity=0.036 Sum_probs=46.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------CCC---ChHHHHHHHHHHhhCCCeEEEEecC
Q 032873 62 GIIMESDLDLPVMNDAARTLSDFGVPYEIKILP------PHQ---NCKEALSYALSAKERGIKIIIVGDG 122 (131)
Q Consensus 62 ~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~S------AHR---tp~~~~~~~~~~~~~g~~ViIA~AG 122 (131)
.-|..|.||+..++++.+.+++.|..++..++- +-| +|+.+.++++.+.+-|++.| +.+-
T Consensus 662 irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i-~l~D 730 (1165)
T 2qf7_A 662 FRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHII-AVKD 730 (1165)
T ss_dssp EEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEE-EEEE
T ss_pred EEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEE-EEeC
Confidence 334578999999999999999999777766542 335 78999999999988898753 4433
No 452
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.32 E-value=1.7e+02 Score=21.46 Aligned_cols=27 Identities=15% Similarity=0.052 Sum_probs=19.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
..++++|+|..+ -+...+++.|-+-|.
T Consensus 9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~ 35 (287)
T 3pxx_A 9 QDKVVLVTGGAR--GQGRSHAVKLAEEGA 35 (287)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 457899999887 455666666766664
No 453
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=29.30 E-value=1.3e+02 Score=24.55 Aligned_cols=48 Identities=15% Similarity=0.064 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHH---HHHHHhhCCCeEEEEe
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS---YALSAKERGIKIIIVG 120 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~---~~~~~~~~g~~ViIA~ 120 (131)
|.++++..+.|++.|+.+ .|+=--|+.+.... -++.+.+.++++||.+
T Consensus 40 L~iA~~l~~~L~~~G~~V--~V~m~tR~~D~~~~L~~R~~~An~~~ADlfISI 90 (326)
T 1xov_A 40 EKVLNAASDELKREGHNV--KTFIDRTSTTQSANLNKIVNWHNANPADVHISV 90 (326)
T ss_dssp HHHHHHHHHHHHHTTCEE--EEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCce--EEEEecCCCCccCCHHHHHHHHHhcCCCEEEEE
Confidence 678888999999988653 23212355554433 3455667789999987
No 454
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=29.23 E-value=1.1e+02 Score=21.41 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=35.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-ChHHHHHHHHHHhhCCC-eEEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-NCKEALSYALSAKERGI-KIII 118 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR-tp~~~~~~~~~~~~~g~-~ViI 118 (131)
.|.|+.. +.=+.|+++...|+++|++|+..=+.... .++...++.+....+++ .+||
T Consensus 50 ~Vvvf~~--~~Cp~C~~~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi 108 (146)
T 2ht9_A 50 CVVIFSK--TSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 108 (146)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEE
Confidence 4555543 44599999999999999998765544432 24433445544444444 4544
No 455
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=29.14 E-value=2.2e+02 Score=22.82 Aligned_cols=61 Identities=21% Similarity=0.274 Sum_probs=45.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHH-hCCCee---------------------EEEEcCCCChHHHHHHHHHHhhCCCeEE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSD-FGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKII 117 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~-fGI~~e---------------------v~V~SAHRtp~~~~~~~~~~~~~g~~Vi 117 (131)
.-.+++|+-.+++++.+++--|++ ..|+.+ +-+.+-.+.-+++.+.+++...+|.+|+
T Consensus 228 ~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi 307 (372)
T 3tbf_A 228 EHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLI 307 (372)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEecCcCHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEecCCchHHHHHHHHHHHHHcCCeEE
Confidence 456999999999999988766665 334322 4455666667888888988888999887
Q ss_pred EEe
Q 032873 118 IVG 120 (131)
Q Consensus 118 IA~ 120 (131)
+..
T Consensus 308 ~i~ 310 (372)
T 3tbf_A 308 LFV 310 (372)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 456
>1kvn_A SRP19; RNA binding protein; NMR {Archaeoglobus fulgidus} SCOP: d.201.1.1 PDB: 1kvv_A
Probab=29.12 E-value=22 Score=24.79 Aligned_cols=22 Identities=5% Similarity=0.241 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHhCCCeeEE
Q 032873 70 DLPVMNDAARTLSDFGVPYEIK 91 (131)
Q Consensus 70 Dl~~~~ka~~~L~~fGI~~ev~ 91 (131)
+-|.++++.++|+.+|+++++.
T Consensus 30 ~nP~~~EI~~a~~~Lgl~~~vE 51 (104)
T 1kvn_A 30 PNVKLHELVEASKELGLKFRAE 51 (104)
T ss_dssp SSCCHHHHHHHHHHHTSSEEEC
T ss_pred cCCCHHHHHHHHHHcCCCeEEe
Confidence 4578899999999999999875
No 457
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=29.09 E-value=1.4e+02 Score=23.72 Aligned_cols=43 Identities=21% Similarity=0.165 Sum_probs=33.1
Q ss_pred HHHHHHHhCCCeeEEEE------cCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 77 AARTLSDFGVPYEIKIL------PPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 77 a~~~L~~fGI~~ev~V~------SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
..++|++.|+++ +|+- +-+-..+++.+.++.+++.|.+|+|-.
T Consensus 32 ~~~ilk~~G~N~-VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 32 LENILAANGVNT-VRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHHHHHTTCCE-EEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCCE-EEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 467889999984 4442 224568888889999999999999975
No 458
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=28.98 E-value=1.8e+02 Score=21.73 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=18.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|-
T Consensus 33 gk~~lVTGas~G--IG~aia~~la~~G~ 58 (275)
T 4imr_A 33 GRTALVTGSSRG--IGAAIAEGLAGAGA 58 (275)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 578899998874 45666666666664
No 459
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=28.93 E-value=1.7e+02 Score=21.50 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=16.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
.++++|+|..+- +...+++.|-+-|-
T Consensus 10 ~k~~lVTGas~g--IG~aia~~l~~~G~ 35 (267)
T 3t4x_A 10 GKTALVTGSTAG--IGKAIATSLVAEGA 35 (267)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 468888888764 44556666666563
No 460
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=28.92 E-value=31 Score=27.85 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=27.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHh--CCCeeEEEEcCCC
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDF--GVPYEIKILPPHQ 97 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~f--GI~~ev~V~SAHR 97 (131)
+|+++.|..++.-.+....+.|++- ++++.+-+...|+
T Consensus 29 kI~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~ 68 (403)
T 3ot5_A 29 KVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR 68 (403)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC---
T ss_pred eEEEEEecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcH
Confidence 7999999999888888888888876 4555566666785
No 461
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5
Probab=28.86 E-value=1.1e+02 Score=21.26 Aligned_cols=46 Identities=13% Similarity=0.192 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEE
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViI 118 (131)
+.+.++.-.|+..||+|+...+........ .+|.+......+=+++
T Consensus 10 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~-~~~~~~nP~g~vP~L~ 55 (210)
T 1v2a_A 10 PPCQSAILLAKKLGITLNLKKTNVHDPVER-DALTKLNPQHTIPTLV 55 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCHHHH-HHHHHHCTTCCSCEEE
T ss_pred ccHHHHHHHHHHcCCCcEEEECCcccchhh-HHHHHhCCCCCcCeEE
Confidence 568899999999999999988765433333 4555432222234444
No 462
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=28.82 E-value=75 Score=25.88 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=38.1
Q ss_pred CCeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhh
Q 032873 58 APIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111 (131)
Q Consensus 58 ~~~V~IimGS~SDl-~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~ 111 (131)
+.++.|+.|.+.+- -.++--.+.|+++||.+++.-.+.. +++.+.++...+
T Consensus 37 P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l~~~i~~lN~ 88 (320)
T 1edz_A 37 PLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFLEEAIIQANG 88 (320)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGHHHHHHHHHH
T ss_pred CeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHHHHHHHHHcC
Confidence 35888889977654 4566778889999999999988754 657777765543
No 463
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=28.77 E-value=1.8e+02 Score=21.53 Aligned_cols=63 Identities=14% Similarity=0.044 Sum_probs=42.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------CCChHHHHHHHHHHhh--CCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP----------------HQNCKEALSYALSAKE--RGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SA----------------HRtp~~~~~~~~~~~~--~g~~ViIA~ 120 (131)
.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ .+++++|-.
T Consensus 28 ~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 103 (260)
T 3un1_A 28 QKVVVITGASQ--GIGAGLVRAYRDRNYR--VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNN 103 (260)
T ss_dssp CCEEEESSCSS--HHHHHHHHHHHHTTCE--EEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 47999999988 4566777778777753 333321 1346667777755433 379999999
Q ss_pred cCcCC
Q 032873 121 DGVEA 125 (131)
Q Consensus 121 AG~aA 125 (131)
||...
T Consensus 104 Ag~~~ 108 (260)
T 3un1_A 104 AGVFL 108 (260)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99753
No 464
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=28.77 E-value=70 Score=24.64 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=32.2
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 59 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 59 ~~V~IimGS~SDl~--~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
.+|+||. +.|.. .++...+.+++.|+...... .-.....+..+++..+..+.+|||...
T Consensus 139 ~~v~ii~--d~~~g~~~~~~~~~~~~~~g~~v~~~~--~~~~~~d~~~~l~~i~~~~~~vi~~~~ 199 (395)
T 3h6g_A 139 KTVTVVY--DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKEMKRGKEFHVIFDC 199 (395)
T ss_dssp SEEEEEE--SSTHHHHHTHHHHTGGGTSSCEEEEEE--CCSSGGGGHHHHHHHHHTTCCEEEEES
T ss_pred eEEEEEE--EChhHHHHHHHHHHhhhcCCceEEEEE--eCCCchhHHHHHHHHhhcCCeEEEEEC
Confidence 3688774 44532 23344444556677554432 223345566666666666777766643
No 465
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=28.76 E-value=86 Score=27.34 Aligned_cols=51 Identities=20% Similarity=0.353 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHhCCCe---------------------eEE-EEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 69 LDLPVMNDAARTLSDFGVPY---------------------EIK-ILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 69 SDl~~~~ka~~~L~~fGI~~---------------------ev~-V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
-|+.-+.+-...|+++||.. +.+ |-+--=+++++.++++.+.++|++|++=
T Consensus 108 G~~~gl~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D 180 (655)
T 3ucq_A 108 GTLKGVEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLD 180 (655)
T ss_dssp SSHHHHHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 48888888889999999952 122 4445557899999999999999999863
No 466
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=28.72 E-value=90 Score=20.71 Aligned_cols=30 Identities=13% Similarity=0.325 Sum_probs=22.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE
Q 032873 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEI 90 (131)
Q Consensus 60 ~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev 90 (131)
+. ||..++-+-...++....|+..+|||..
T Consensus 37 ~l-ViiA~D~~~~~~~~i~~~c~~~~vp~~~ 66 (101)
T 3v7q_A 37 KL-VLLTEDASSNTAKKVTDKCNYYKVPYKK 66 (101)
T ss_dssp SE-EEEETTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred eE-EEEeccccccchhhhcccccccCCCeee
Confidence 44 4555555566899999999999999764
No 467
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=28.70 E-value=60 Score=22.92 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCC
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPPH 96 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SAH 96 (131)
+.+.++.-+|+..||+|+...+..-
T Consensus 12 p~~~~v~~~L~~~gi~~~~~~v~~~ 36 (218)
T 1r5a_A 12 PPCRSVLLLAKMIGVELDLKVLNIM 36 (218)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred hhHHHHHHHHHHcCCCCeEEecCcc
Confidence 6788999999999999999888753
No 468
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=28.67 E-value=1.8e+02 Score=21.47 Aligned_cols=26 Identities=8% Similarity=0.033 Sum_probs=17.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFG 85 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fG 85 (131)
..++++|+|..+- +...+++.|-+.|
T Consensus 30 ~~k~vlITGasgg--IG~~la~~L~~~G 55 (272)
T 1yb1_A 30 TGEIVLITGAGHG--IGRLTAYEFAKLK 55 (272)
T ss_dssp TTCEEEEETTTSH--HHHHHHHHHHHTT
T ss_pred CCCEEEEECCCch--HHHHHHHHHHHCC
Confidence 3578889998774 5556666666655
No 469
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein ST initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.48.1
Probab=28.63 E-value=44 Score=22.68 Aligned_cols=44 Identities=20% Similarity=0.156 Sum_probs=31.1
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCeeEEEEc--CCC-ChHHHHHHHHHH
Q 032873 66 ESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSA 109 (131)
Q Consensus 66 GS~SDl~~~~ka~~~L~~fGI~~ev~V~S--AHR-tp~~~~~~~~~~ 109 (131)
|+.|=-+++.++.+.|++.|++|++.=.+ .-= .-+++.+.++.+
T Consensus 14 ~~~svs~~Va~~i~~i~~sgl~y~~~pm~T~iEG~e~devm~vv~~~ 60 (99)
T 1lxn_A 14 CSTSLSSYVAAAVEALKKLNVRYEISGMGTLLEAEDLDELMEAVKAA 60 (99)
T ss_dssp SSSCCHHHHHHHHHHHTTSSCEEEEETTEEEEEESSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHcCCCeEeCCCeeEEECCCHHHHHHHHHHH
Confidence 45688899999999999999999854222 111 366777766443
No 470
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.52 E-value=1.9e+02 Score=21.92 Aligned_cols=47 Identities=15% Similarity=0.007 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCC--Ch-------HHHHHHHHHHhhCCCeEEE
Q 032873 71 LPVMNDAARTLSDFGVPYEIKILPPHQ--NC-------KEALSYALSAKERGIKIII 118 (131)
Q Consensus 71 l~~~~ka~~~L~~fGI~~ev~V~SAHR--tp-------~~~~~~~~~~~~~g~~ViI 118 (131)
+..++++.+.++.+|+++-+ +.+... ++ +.+.++++.+++.|+++.|
T Consensus 113 ~~~~~~~i~~A~~lG~~~v~-~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 113 DEFWKKATDIHAELGVSCMV-QPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEE-ECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE-eCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 56788899999999999765 443322 12 3344556777788887765
No 471
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=28.50 E-value=2e+02 Score=22.01 Aligned_cols=27 Identities=19% Similarity=0.067 Sum_probs=18.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
..++++|+|..+- +...+++.|-+-|-
T Consensus 45 ~gk~~lVTGas~G--IG~aia~~la~~G~ 71 (317)
T 3oec_A 45 QGKVAFITGAARG--QGRTHAVRLAQDGA 71 (317)
T ss_dssp TTCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 3578999998874 45566666666664
No 472
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=28.48 E-value=53 Score=22.46 Aligned_cols=44 Identities=2% Similarity=-0.074 Sum_probs=30.6
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCeeEEEEc--CCCChHHHHHHHHHH
Q 032873 66 ESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSA 109 (131)
Q Consensus 66 GS~SDl~~~~ka~~~L~~fGI~~ev~V~S--AHRtp~~~~~~~~~~ 109 (131)
|+.|=-+++.++.+.|++.|++|++.=.+ .-=.-+++.+.++.+
T Consensus 18 ~~~svs~~Va~~i~~i~~sGl~y~~~pm~T~IEGe~devm~vv~~~ 63 (104)
T 1lxj_A 18 DSASISDFVALIEKKIRESPLKSTLHSAGTTIEGPWDDVMGLIGEI 63 (104)
T ss_dssp SCSCCHHHHHHHHHHHHTSSSEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCeEeCCCccEEEcCHHHHHHHHHHH
Confidence 45688899999999999999999754211 011356777766443
No 473
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=28.41 E-value=1.4e+02 Score=23.63 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCHH---HHHHHHHHHHHhCCCeeEEEEcCCC--------ChHHHHHHHHHHhhC--CCeEEEEecCc--
Q 032873 59 PIVGIIMESDLDLP---VMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKER--GIKIIIVGDGV-- 123 (131)
Q Consensus 59 ~~V~IimGS~SDl~---~~~ka~~~L~~fGI~~ev~V~SAHR--------tp~~~~~~~~~~~~~--g~~ViIA~AG~-- 123 (131)
.+|++|+|++-+.. .-+.+.+.|++.|.+ +.=.+.+- -|+.....++...+. ..-|+|++.|.
T Consensus 20 mkiali~~~sqa~kN~~lKe~i~~~L~~~G~e--V~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTGiG~ 97 (231)
T 3c5y_A 20 MKIALIIENSQAAKNAVVHEALTTVAEPLGHK--VFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTGMGS 97 (231)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHHGGGTCE--EEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSSHHH
T ss_pred ceEEEEecCCHhhhHHHHHHHHHHHHHHCCCE--EEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCcHHH
Confidence 48999999999844 556777889999874 43333442 466666666554333 34789999883
Q ss_pred ---CCcCcCC
Q 032873 124 ---EAHLSGT 130 (131)
Q Consensus 124 ---aAhLpGv 130 (131)
+|-.||+
T Consensus 98 sIAANKv~GI 107 (231)
T 3c5y_A 98 MLAANAMPGV 107 (231)
T ss_dssp HHHHHTSTTC
T ss_pred HHHHhcCCCe
Confidence 4455554
No 474
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=28.30 E-value=1.8e+02 Score=22.14 Aligned_cols=90 Identities=11% Similarity=0.122 Sum_probs=43.1
Q ss_pred HHhhcccccccccCCC-cccccCCCCCCCCCCCeEEEEeccCCCH----HHHHHHHHHHH-HhCCCeeEEEEcCCCChH-
Q 032873 28 SATSRRKDDSSVREPS-TVFEEENPNGDSTDAPIVGIIMESDLDL----PVMNDAARTLS-DFGVPYEIKILPPHQNCK- 100 (131)
Q Consensus 28 ~vk~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~V~IimGS~SDl----~~~~ka~~~L~-~fGI~~ev~V~SAHRtp~- 100 (131)
+.+++....++++... ...... .........|++++....+. +........++ .+. .|.+.+...+...+
T Consensus 39 ~tr~rV~~~a~~lgY~~pn~~a~--~l~~~~s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~-g~~~~~~~~~~~~~~ 115 (366)
T 3h5t_A 39 ELRQRILDTAEDMGYLGPDPVAR--SLRTRRAGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG-DTQLTLIPASPASSV 115 (366)
T ss_dssp HHHHHHHHHHHHTTC----------------CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS-SCEEEEEECCCCTTC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHH--HhhcCCCCEEEEEecCCccccccCHHHHHHHHHHHHHHh-hCCEEEEEcCCCccH
Confidence 4455555556666542 110000 00122346899999875331 22223333332 233 56666666554432
Q ss_pred HHHHHHHHHhhCCCeEEEEe
Q 032873 101 EALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 101 ~~~~~~~~~~~~g~~ViIA~ 120 (131)
+..++++....++++-||..
T Consensus 116 ~~~~~~~~l~~~~vdGiIi~ 135 (366)
T 3h5t_A 116 DHVSAQQLVNNAAVDGVVIY 135 (366)
T ss_dssp CHHHHHHHHHTCCCSCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEe
Confidence 35566776777778766655
No 475
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=28.21 E-value=23 Score=25.93 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=37.3
Q ss_pred CCCeEEEEeccCC-C---HHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 57 DAPIVGIIMESDL-D---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 57 ~~~~V~IimGS~S-D---l~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
+...|++++.++. + ....+.+.+.+++.|....+.. .+..++...++++....++++-+|..
T Consensus 10 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~vdgiIi~ 75 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVI--CPYKTDCLHLEKGISKENSFDAAIIA 75 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEE--EEECTTCGGGCGGGSTTTCCSEEEES
T ss_pred CCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEe--cCCCchhHHHHHHHHhccCCCEEEEe
Confidence 4468999997433 2 3456667778888888665543 33344444455555556666666654
No 476
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=28.17 E-value=1.7e+02 Score=21.12 Aligned_cols=65 Identities=9% Similarity=-0.044 Sum_probs=39.3
Q ss_pred CCCeEEEEeccC--CCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCChHHHHHHHHHHh
Q 032873 57 DAPIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKILPP------------------------HQNCKEALSYALSAK 110 (131)
Q Consensus 57 ~~~~V~IimGS~--SDl~~~~ka~~~L~~fGI~~ev~V~SA------------------------HRtp~~~~~~~~~~~ 110 (131)
...+.++|+|.. +-+ ...+++.|-+-|. .+.+++- -..++.+.++++...
T Consensus 12 ~~~k~vlITGa~~~~gi--G~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSI--AYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTCEEEECCCCSTTSH--HHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcH--HHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 346789999976 554 5566666666664 3333321 123455555555443
Q ss_pred h--CCCeEEEEecCcCC
Q 032873 111 E--RGIKIIIVGDGVEA 125 (131)
Q Consensus 111 ~--~g~~ViIA~AG~aA 125 (131)
+ .+++++|-.||...
T Consensus 88 ~~~g~id~lv~nAg~~~ 104 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAP 104 (271)
T ss_dssp HHCSCEEEEEECCCCCC
T ss_pred HHcCCCCEEEECCccCc
Confidence 3 36799999998754
No 477
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=28.07 E-value=1.7e+02 Score=22.01 Aligned_cols=68 Identities=13% Similarity=0.102 Sum_probs=42.4
Q ss_pred EEeccCCC-HHHHHHHHHHHHHhCCCe-eEEEEcCCC--ChHHHHHHHHHHhhC--CCeEEEEecCc-----CCcCcCC
Q 032873 63 IIMESDLD-LPVMNDAARTLSDFGVPY-EIKILPPHQ--NCKEALSYALSAKER--GIKIIIVGDGV-----EAHLSGT 130 (131)
Q Consensus 63 IimGS~SD-l~~~~ka~~~L~~fGI~~-ev~V~SAHR--tp~~~~~~~~~~~~~--g~~ViIA~AG~-----aAhLpGv 130 (131)
|..|||-. ++.=+.+.+.|++.|.++ ++..-|.-+ -|+.....++...+. ..-|+|++.|. +|-.||+
T Consensus 24 IaIgsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGiG~sIaANKv~GI 102 (166)
T 3s5p_A 24 VAFASDHGGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGIGISIAANKMKGI 102 (166)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHHTSTTC
T ss_pred EEEEECchHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHHhhcCCCe
Confidence 77899887 666777889999999764 344433221 567666666555433 24689998884 3555554
No 478
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=28.00 E-value=79 Score=22.22 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP 95 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA 95 (131)
+.+.++.-+|+..||+|+...+..
T Consensus 18 ~~~~~v~~~L~~~gi~~e~~~v~~ 41 (215)
T 3lyp_A 18 HYSHRVRIVLAEKGVSAEIISVEA 41 (215)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECC-
T ss_pred chHHHHHHHHHHCCCCcEEEecCc
Confidence 789999999999999999877653
No 479
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=27.98 E-value=1.5e+02 Score=27.16 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=38.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC-eeEEEEcCCC------------ChHHHHHHHHHHhhC-CCeEEE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP-YEIKILPPHQ------------NCKEALSYALSAKER-GIKIII 118 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~-~ev~V~SAHR------------tp~~~~~~~~~~~~~-g~~ViI 118 (131)
+.++.+|+. +|.+.+.++++.+++.|.. .++.+.|+|. .|+.+.++++...+. +.-|++
T Consensus 636 ~~i~~i~~g-~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~v 708 (1025)
T 1gte_A 636 IVIASIMCS-YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFA 708 (1025)
T ss_dssp EEEEEECCC-SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CeEEEecCC-CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEE
Confidence 455556543 5778888888888888876 5688878774 566666666554432 344443
No 480
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=27.92 E-value=1.8e+02 Score=21.98 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=0.0
Q ss_pred eEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 60 IVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 60 ~V~IimGS~SDl~--~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+|++| .+++++. ..+...+.|++.|+.......-.-...+ +...+....+.+.++++...
T Consensus 142 ~vaii-~~~~~~g~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d-~~~~l~~i~~~~~d~v~~~~ 203 (375)
T 3i09_A 142 TWFFL-TADYAFGKALEKNTADVVKANGGKVLGEVRHPLSASD-FSSFLLQAQSSKAQILGLAN 203 (375)
T ss_dssp EEEEE-EESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCSC-CHHHHHHHHHTCCSEEEEEC
T ss_pred eEEEE-ecccHHHHHHHHHHHHHHHHcCCEEeeeeeCCCCCcc-HHHHHHHHHhCCCCEEEEec
No 481
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=27.89 E-value=1.9e+02 Score=21.48 Aligned_cols=62 Identities=11% Similarity=0.026 Sum_probs=38.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC--------------------CChHHHHHHHHHHhh--CCCeE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------------QNCKEALSYALSAKE--RGIKI 116 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAH--------------------Rtp~~~~~~~~~~~~--~g~~V 116 (131)
.++++|+|..+- +...+++.|-+-|-. +.+++-. ..++.+.++++...+ .++++
T Consensus 27 ~k~vlVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 27 SAPILITGASQR--VGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp CCCEEESSTTSH--HHHHHHHHHHHTTCC--EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 578899998874 566777777777743 3333211 123444455544322 36899
Q ss_pred EEEecCcC
Q 032873 117 IIVGDGVE 124 (131)
Q Consensus 117 iIA~AG~a 124 (131)
+|-.||..
T Consensus 103 lv~nAg~~ 110 (260)
T 3gem_A 103 VVHNASEW 110 (260)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99999864
No 482
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=27.88 E-value=1.3e+02 Score=22.49 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=0.0
Q ss_pred CCCCCCcccceeecceeeecCChHHHhhcccccccccCCCcccccCCCCCCCCCCCeEEEEec-cCCCHHHHHHHHHHHH
Q 032873 4 NSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIME-SDLDLPVMNDAARTLS 82 (131)
Q Consensus 4 ~~~~~~~~~qvyrghitVt~~~l~~vk~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~V~IimG-S~SDl~~~~ka~~~L~ 82 (131)
...-|....+-|.....+...+....+.-.+++.+++.. .+|++|.+ +..-....+...+.|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~----------------~~iaii~~~~~~~~~~~~~~~~~l~ 163 (356)
T 3ipc_A 100 AATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKD----------------AKVAIIHDKTPYGQGLADETKKAAN 163 (356)
T ss_dssp SCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCTT----------------CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcCC----------------CEEEEEeCCChHHHHHHHHHHHHHH
Q ss_pred HhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEec
Q 032873 83 DFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (131)
Q Consensus 83 ~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~A 121 (131)
+.|++...... .-.........++.....+.++++.++
T Consensus 164 ~~g~~v~~~~~-~~~~~~d~~~~~~~l~~~~~d~v~~~~ 201 (356)
T 3ipc_A 164 AAGVTEVMYEG-VNVGDKDFSALISKMKEAGVSIIYWGG 201 (356)
T ss_dssp HTTCCCSEEEE-CCTTCCCCHHHHHHHHHTTCCEEEEES
T ss_pred HcCCEEEEEEe-eCCCCCCHHHHHHHHHhcCCCEEEEcc
No 483
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=27.82 E-value=23 Score=25.23 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=20.1
Q ss_pred cCCCHHHHHHHHHHHHHhCCCee
Q 032873 67 SDLDLPVMNDAARTLSDFGVPYE 89 (131)
Q Consensus 67 S~SDl~~~~ka~~~L~~fGI~~e 89 (131)
+..|..+++.+.+.|+++|+|..
T Consensus 31 ~sMdESTAKGifKyL~elGvPas 53 (115)
T 2es9_A 31 HSMDESTAKGILKYLHDLGVPVS 53 (115)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CccchHHHHHHHHHHHHcCCCCC
Confidence 34699999999999999999854
No 484
>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}
Probab=27.82 E-value=66 Score=22.42 Aligned_cols=29 Identities=17% Similarity=0.167 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEc-CCCChH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILP-PHQNCK 100 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~S-AHRtp~ 100 (131)
+.+.++.-+|+..||+|+...+. .|+.|+
T Consensus 12 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~ 41 (214)
T 3cbu_A 12 NYYNKVKLALLEKNVPFEEVLAWIGETDTT 41 (214)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTSSCTT
T ss_pred cHhHHHHHHHHhCCCCCEEEecCcccCCcc
Confidence 67889999999999999988876 355544
No 485
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.80 E-value=1.8e+02 Score=21.28 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=17.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 032873 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (131)
Q Consensus 58 ~~~V~IimGS~SDl~~~~ka~~~L~~fGI 86 (131)
..++++|+|..+- +...+++.|-+-|.
T Consensus 11 ~~k~vlITGas~G--IG~~~a~~L~~~G~ 37 (311)
T 3o26_A 11 KRRCAVVTGGNKG--IGFEICKQLSSNGI 37 (311)
T ss_dssp -CCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCcEEEEecCCch--HHHHHHHHHHHCCC
Confidence 3578999998874 45566666666563
No 486
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.65 E-value=1.8e+02 Score=21.21 Aligned_cols=62 Identities=5% Similarity=-0.064 Sum_probs=43.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCChHHHHHHHHHHhh--CCCeEEEEecCc
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKE--RGIKIIIVGDGV 123 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SA-------------HRtp~~~~~~~~~~~~--~g~~ViIA~AG~ 123 (131)
.++++|+|..+. +...+++.|-+-|.. +.+++- -..++.+.++++...+ ..++++|-.||.
T Consensus 22 ~k~vlITGas~g--IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGSGA--LGAEVVKFFKSKSWN--TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTTSH--HHHHHHHHHHHTTCE--EEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 478999999884 567788888777753 433331 2346777777766543 357999999996
Q ss_pred C
Q 032873 124 E 124 (131)
Q Consensus 124 a 124 (131)
.
T Consensus 98 ~ 98 (251)
T 3orf_A 98 W 98 (251)
T ss_dssp C
T ss_pred C
Confidence 4
No 487
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=27.63 E-value=1.9e+02 Score=21.59 Aligned_cols=60 Identities=12% Similarity=0.157 Sum_probs=36.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC------------------------hHHHHHHHHHHhh--C
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN------------------------CKEALSYALSAKE--R 112 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRt------------------------p~~~~~~~~~~~~--~ 112 (131)
.++++|+|..+- +...+++.|-+-|. .+.++ -|. ++.+.++++...+ .
T Consensus 28 ~k~~lVTGas~G--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 28 KKIAIVTGAGSG--VGRAVAVALAGAGY--GVALA--GRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp CCEEEETTTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578899998874 45566666666664 22222 233 4444444443322 3
Q ss_pred CCeEEEEecCcC
Q 032873 113 GIKIIIVGDGVE 124 (131)
Q Consensus 113 g~~ViIA~AG~a 124 (131)
+++++|-.||..
T Consensus 102 ~iD~lVnnAg~~ 113 (272)
T 4dyv_A 102 RVDVLFNNAGTG 113 (272)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999999975
No 488
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5
Probab=27.47 E-value=49 Score=23.18 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP 95 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA 95 (131)
+.+.++.-+|+..||+|+...+..
T Consensus 12 p~~~~v~~~L~~~gi~ye~~~v~~ 35 (216)
T 1aw9_A 12 PNVVRVATVLNEKGLDFEIVPVDL 35 (216)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCS
T ss_pred ccHHHHHHHHHHcCCccEEEecCc
Confidence 688999999999999999887764
No 489
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=27.45 E-value=1.8e+02 Score=21.15 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHhh--CCCeEEEEecCcC
Q 032873 99 CKEALSYALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 99 p~~~~~~~~~~~~--~g~~ViIA~AG~a 124 (131)
++.+.++++...+ .+++++|-.||..
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nAg~~ 95 (247)
T 2jah_A 68 RQGVDAAVASTVEALGGLDILVNNAGIM 95 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 4444444433221 3578888888864
No 490
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5
Probab=27.38 E-value=78 Score=22.46 Aligned_cols=32 Identities=13% Similarity=-0.090 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC-----CCChHHHH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP-----HQNCKEAL 103 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA-----HRtp~~~~ 103 (131)
+.++++.-+|+..||+|+...+.. |+.|+.+.
T Consensus 15 ~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~ 51 (224)
T 3gtu_B 15 GLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLD 51 (224)
T ss_dssp GGGHHHHHHHHHTTCCEEEEEECCCCSSSCCCHHHHH
T ss_pred cchHHHHHHHHHcCCCceEEEeecCCcccccHHHHHh
Confidence 578899999999999999988874 44555443
No 491
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=27.26 E-value=2e+02 Score=21.54 Aligned_cols=45 Identities=13% Similarity=-0.037 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCeeEEEEcCCCChHHHH-HHHHHHhhCCCeEEEEec
Q 032873 77 AARTLSDFGVPYEIKILPPHQNCKEAL-SYALSAKERGIKIIIVGD 121 (131)
Q Consensus 77 a~~~L~~fGI~~ev~V~SAHRtp~~~~-~~~~~~~~~g~~ViIA~A 121 (131)
+.+.++++|||+..-=-.-.++.+... ++.+..++.++++++.++
T Consensus 45 v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a~ 90 (212)
T 3av3_A 45 VIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQIDWIALAG 90 (212)
T ss_dssp HHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcCCCEEEEch
Confidence 344557788886421001123332222 233444556678766653
No 492
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=27.18 E-value=1.3e+02 Score=21.51 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=16.2
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeE
Q 032873 67 SDLDLPVMNDAARTLSDFGVPYEI 90 (131)
Q Consensus 67 S~SDl~~~~ka~~~L~~fGI~~ev 90 (131)
.....+.++++.+.++++|++.-+
T Consensus 85 ~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 85 GVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp TTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCChhHHHHHHHHHHHcCCeEEE
Confidence 334556677888888888876544
No 493
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=27.13 E-value=96 Score=21.84 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC-CCCh
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP-HQNC 99 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA-HRtp 99 (131)
+.+.++.-+|+..||+|+...+.. ++.|
T Consensus 16 p~~~~v~~~L~~~gi~~e~~~v~~~~~~~ 44 (216)
T 3lyk_A 16 IYCHQVKIVLAEKGVLYENAEVDLQALPE 44 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCH
T ss_pred hhHHHHHHHHHHcCCCcEEEeCCcccCcH
Confidence 789999999999999999887763 4444
No 494
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=27.09 E-value=1.7e+02 Score=20.79 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=17.8
Q ss_pred CChHHHHHHHHHHhh--CCCeEEEEecCcC
Q 032873 97 QNCKEALSYALSAKE--RGIKIIIVGDGVE 124 (131)
Q Consensus 97 Rtp~~~~~~~~~~~~--~g~~ViIA~AG~a 124 (131)
..++.+.++++...+ .+++++|-.||..
T Consensus 68 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 68 SDMADVRRLTTHIVERYGHIDCLVNNAGVG 97 (244)
T ss_dssp TSHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence 445666666544332 3589999999865
No 495
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=27.02 E-value=1.7e+02 Score=20.75 Aligned_cols=37 Identities=5% Similarity=-0.023 Sum_probs=29.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ 97 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHR 97 (131)
.+|+|+..-..+..-+-...+.|+.-| |+++++|...
T Consensus 4 ~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~ 40 (197)
T 2rk3_A 4 KRALVILAKGAEEMETVIPVDVMRRAG--IKVTVAGLAG 40 (197)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEETTC
T ss_pred CEEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 479999987777777777888898887 6888898775
No 496
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=27.02 E-value=1.7e+02 Score=20.83 Aligned_cols=57 Identities=16% Similarity=0.096 Sum_probs=40.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHHHHHHHHHhhCCCeEEEEe
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~~~~~~~~~~~g~~ViIA~ 120 (131)
+++.|+..+. ..++...+.|+..|+++. ....-..+++-.+.++...+....|+||-
T Consensus 55 ~~~lVF~~~~---~~~~~l~~~L~~~g~~~~--~lhg~~~~~~R~~~l~~F~~g~~~vLvaT 111 (191)
T 2p6n_A 55 PPVLIFAEKK---ADVDAIHEYLLLKGVEAV--AIHGGKDQEERTKAIEAFREGKKDVLVAT 111 (191)
T ss_dssp SCEEEECSCH---HHHHHHHHHHHHHTCCEE--EECTTSCHHHHHHHHHHHHHTSCSEEEEC
T ss_pred CCEEEEECCH---HHHHHHHHHHHHcCCcEE--EEeCCCCHHHHHHHHHHHhcCCCEEEEEc
Confidence 3588888765 567778888888887643 34445556666667766667778898874
No 497
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=26.99 E-value=77 Score=22.10 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=25.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeE
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEI 90 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev 90 (131)
...+||.+-.|...........|+++||||..
T Consensus 42 a~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~ 73 (113)
T 3jyw_G 42 AKLVLIANDVDPIELVVFLPALCKKMGVPYAI 73 (113)
T ss_dssp CSEEEECSCCSSHHHHTTHHHHHHHTTCCCEE
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 45667776666778888899999999999873
No 498
>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5
Probab=26.98 E-value=95 Score=22.19 Aligned_cols=29 Identities=10% Similarity=0.167 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC-CCChH
Q 032873 72 PVMNDAARTLSDFGVPYEIKILPP-HQNCK 100 (131)
Q Consensus 72 ~~~~ka~~~L~~fGI~~ev~V~SA-HRtp~ 100 (131)
+.+.++.-+|+..||+|+...+.. |+.|+
T Consensus 16 p~~~~v~~~L~~~gi~~e~~~v~~~~~~~~ 45 (231)
T 1oyj_A 16 PFGQRCRIAMAEKGLEFEYREEDLGNKSDL 45 (231)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHH
T ss_pred hHHHHHHHHHHHCCCCCeEEecCcccCCHH
Confidence 789999999999999999887764 55443
No 499
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=26.90 E-value=1.9e+02 Score=21.14 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=37.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChHHH------------------------HHHHHHHhh--C
Q 032873 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA------------------------LSYALSAKE--R 112 (131)
Q Consensus 59 ~~V~IimGS~SDl~~~~ka~~~L~~fGI~~ev~V~SAHRtp~~~------------------------~~~~~~~~~--~ 112 (131)
.++++|+|..+ -+...+++.|-+-|-. + +-..|.++.. .++++...+ .
T Consensus 9 gk~~lVTGas~--gIG~a~a~~l~~~G~~--V--~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASR--GIGKAIAELLAERGAK--V--IGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSS--HHHHHHHHHHHHTTCE--E--EEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--E--EEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 57899999887 4556677777666743 2 2233444443 333333222 3
Q ss_pred CCeEEEEecCcCC
Q 032873 113 GIKIIIVGDGVEA 125 (131)
Q Consensus 113 g~~ViIA~AG~aA 125 (131)
+++++|-.||...
T Consensus 83 ~iD~lv~nAg~~~ 95 (248)
T 3op4_A 83 GVDILVNNAGITR 95 (248)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899999988653
No 500
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=26.90 E-value=47 Score=27.12 Aligned_cols=28 Identities=11% Similarity=0.152 Sum_probs=22.7
Q ss_pred EEcCCCChHHHHHHHHHHhhCCCeEEEE
Q 032873 92 ILPPHQNCKEALSYALSAKERGIKIIIV 119 (131)
Q Consensus 92 V~SAHRtp~~~~~~~~~~~~~g~~ViIA 119 (131)
|-+.-=+.+++.++++.+.++|++||+=
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD 84 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVD 84 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3344457899999999999999999973
Done!