BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032878
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 114/126 (90%)
Query: 1 MTADGGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTG 60
MT G NQLIS+ P+ELKF+FELEKQ +CDLKV N TE++VAFKVKTTSPKKYFVRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 61 VVQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIE 120
V+QPWDSCIIRVTLQAQRE PPDMQCKDKFLLQSTIVP +TDVD+LP DTF KDSGKT+
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 121 ECKLRV 126
ECKL+V
Sbjct: 121 ECKLKV 126
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHH-VAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+++HP ELKF FEL+KQ C +++ N T VAFKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6 LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 127
C + VT+QAQ+E+P DMQCKDKFL+Q+ +V T ++ + FNK++G+ IE+ KLRVV
Sbjct: 66 CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125
Query: 128 LYSA 131
A
Sbjct: 126 YIPA 129
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 89/120 (74%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++V P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 20 SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
+C + VT+QAQ+E+P DMQCKDKFLLQ I ++ P+ F+K++G +EE KLRV
Sbjct: 80 TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRV 139
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 88/122 (72%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
N+L+++ P +L+F FEL+KQ C L + N T+++VAFKVKTT+PKKY VRPNTGVV P
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
S + VT+QAQ+E+P D+QCKDKFLLQ + D+ + F+K++G +EE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 126 VV 127
VV
Sbjct: 122 VV 123
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 82/120 (68%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSC 68
L+ + P L+F +L+KQ C +++ N T H+VAFKVKTTSPKKY VRPN GVV P +C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 69 IIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVL 128
V +QA +E PPDM CKDKFL+QST V + T +D+ F+K GK IEE KLRV L
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 81/122 (66%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
++L+ + P +++F EL K+ C L + N TE++VAFK KTT+ KKY+VRPN GVV P
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLR 125
SC + V +QA +E+P DMQC+DK L Q +V T D+ + F+K++G EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 126 VV 127
V+
Sbjct: 293 VM 294
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 77/121 (63%)
Query: 7 NQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
++L++ +++F EL KQG C L + N T+++VAFK +TT PK Y V+P+ GVV P
Sbjct: 4 DELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRS 63
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRV 126
SC + V +QA +E+P D QCKDK L Q +V T ++ + F+K++G +EE ++
Sbjct: 64 SCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKI 123
Query: 127 V 127
+
Sbjct: 124 I 124
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 80/122 (65%)
Query: 5 GGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQP 64
N+L+ + P L+F FEL+KQ C L + N T+++VAFKVKTT+ Y VRPN G++ P
Sbjct: 2 SNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILP 61
Query: 65 WDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKL 124
+C + VT+QAQ+E P DMQ +KF++QS + ++ + F+K+SG +EE KL
Sbjct: 62 KSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 125 RV 126
RV
Sbjct: 122 RV 123
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCKDK 89
+ V N V FKVKTT+PK Y VRPN+G ++P + ++V LQA +E P PD +C+DK
Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDK 82
Query: 90 FLLQSTIV 97
FL+QS +
Sbjct: 83 FLIQSMAI 90
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 29 CDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESP-PDMQCK 87
CDL++ N + + FKVKTT+PK+Y VRPN G ++ + + V LQ P P +C+
Sbjct: 21 CDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCR 80
Query: 88 DKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVV 127
DKFL+QST + D+ D + + S I E K+R V
Sbjct: 81 DKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCV 119
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
S + V LQ + P+ + K KF++QS P++T
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAPADT 99
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
S + V LQ + P+ + K KF++QS P++T
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAPTDT 99
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+G++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
S + V LQ + P+ + K KF++QS P++T
Sbjct: 66 SINVSVMLQP-FDYDPNEKSKHKFMVQSMFAPTDT 99
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT+P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
S + V LQ + P+ + K KF++QS P +T
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDT 99
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT 101
LQ + P+ + K KF++Q+ P NT
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNT 106
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSNT 101
LQ + P+ + K KF++Q+ P NT
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPNT 106
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQ 75
EL+F DLK+ N T+ + FKVKTT+PK+Y VRPN+G+++P S + V LQ
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 76 AQRESPPDMQCKDKFLLQSTIVP 98
P+ + K KF++QS P
Sbjct: 75 PFNYD-PNEKNKHKFMVQSMYAP 96
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 QLISVHPE-ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66
Q++S+ P+ ELKF +LK+ N T+ +V FKVKTT P++Y VRPN+GV+
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 67 SCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
S + V LQ + P+ + K KF++QS P +T
Sbjct: 66 SLNVSVMLQP-FDYDPNEKSKHKFMVQSMFAPPDT 99
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + P+ L + L +Q + NN++ +AFKVKTT+PK Y VRPN VV P ++
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 70 IRVTLQAQRESP-PDMQCKDKFLLQSTIVPSNTDVD 104
++V E P D +C+DKFL+ +PS D++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV--ITLPSPYDLN 97
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+GV+ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN 100
LQ + P+ + K KF++Q+ P N
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPN 105
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN 100
LQ + P+ + K KF++Q+ P N
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPN 105
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 14 PEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVT 73
P +LKF +LK+ N ++ V FKVKTT+P++Y VRPN+G++ P + + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 74 LQAQRESPPDMQCKDKFLLQSTIVPSN 100
LQ + P+ + K KF++Q+ P N
Sbjct: 80 LQP-FDYDPNEKSKHKFMVQTIFAPPN 105
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS22 PE=1 SV=2
Length = 175
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 10 ISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCI 69
+ + PE+L F L KQ +K+ N+ E V FKV+T++P KY VRPN ++ +S
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 70 IRVTLQAQRESPPD---MQCKDKFLLQSTIVPS 99
+++ +S D Q +DKFL+ + +P+
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPA 93
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 15 EELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIR--- 71
E+L F +E KQ +K+ N ++ HVAFK +TT+PK F+RP ++ P ++ I
Sbjct: 114 EKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFK 173
Query: 72 -VTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVL 128
V E P D + + KF + S V D P+ F++ +E LRV+
Sbjct: 174 FVEPPENNEKPMDQRSRVKFKIMSLKVKGPMDYV---PELFDEQKDDVSKEQILRVIF 228
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 16 ELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQ 75
+L F +E KQ +K+ N ++ HVAFK +TT PK F+RP ++ P + I V
Sbjct: 107 KLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKF 166
Query: 76 AQ----RESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVL 128
+ E P + + KF + S + TD P+ F + EE +RVV
Sbjct: 167 VEPPENNEKPMEQKSGVKFKIMSLKMKVPTDYM---PELFEEQKDHVSEEQVMRVVF 220
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 17 LKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRV---- 72
L F +E KQ +K+ N ++ H AFK +TT+PK ++RP GV+ P +S V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 -TLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLPPDTFNKDSGKTIEECKLRVVLYSA 131
+ + P + + K KF + S V + P+ F++ + E LRV+ A
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYV---PELFDEQKDQVAVEQVLRVIFIDA 201
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + +E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQST 95
I V+ + +D+FL+ +
Sbjct: 387 IDIIVSPHGGL----TVSAQDRFLIMAA 410
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 9 LISVHPEELKFIFELEKQGFCDLKVINN-TEHHVAFKVKTTSPKKYFVRPNTGVVQPWDS 67
L+ + P E + E L V+ N T++ VAFKV+TT+P+KY V+P+ P S
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 68 CIIRVTLQAQRESPPDMQCKDKFLLQST 95
I V+ + +D+FL+ +
Sbjct: 387 VDIVVSPHGGL----TVSAQDRFLIMAA 410
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77
PE=2 SV=3
Length = 127
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 95 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 140
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans
GN=msp-10 PE=2 SV=4
Length = 127
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCVDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55
PE=2 SV=3
Length = 127
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKEAVLLAVSCDA 77
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KTT+ K+ V P GV+ P ++ + V+ A
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVFLAVSCDA 77
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 6 GNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPW 65
GN + V P EL F + + L + N E + FKV T+P KY V G V+P
Sbjct: 13 GNLPVFVFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKP- 71
Query: 66 DSCIIRVTLQAQRESPPDMQCKDKFLLQ 93
C + + ++ + DKF LQ
Sbjct: 72 -QCCMDIVIRHRDVRSCHYGVIDKFRLQ 98
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 33 VINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQRESPPDMQCKDKFLL 92
+++ +E +AFKVK+++ + Y VRP G V + L+ R + P + DK ++
Sbjct: 22 IVSESESRLAFKVKSSNNESYRVRPVYGFVDAKG----KAKLEVNRLAGPAKE--DKLVI 75
Query: 93 QSTIVPSN 100
Q VP++
Sbjct: 76 QYAEVPAD 83
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
++VIN + + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
>sp|Q9CGG6|MURQ_LACLA N-acetylmuramic acid 6-phosphate etherase OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=murQ PE=3 SV=1
Length = 297
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 5 GGNQLISVHPEELKFIFELEKQGFCDLKVINNTEHHVAFKVKTTSPKKYFVRP-----NT 59
GG++ ++V E + EL +Q DLK+ E+ + + + Y +
Sbjct: 102 GGDKAMTVSVEGAEDSLELGRQDLIDLKL---NENDLVLGIAASGRTPYVIGALDYAKEI 158
Query: 60 GVVQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNT 101
G SC + + E P ++ C +FL ST + S T
Sbjct: 159 GAKTASLSCNLNAEISKHAEFPIEVDCGPEFLTGSTRLKSGT 200
>sp|Q18461|MSP49_CAEEL Major sperm protein 49 OS=Caenorhabditis elegans GN=msp-49 PE=2
SV=3
Length = 127
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+KVIN++ + + +KT + K+ V P GV+ P ++ ++ V+ A
Sbjct: 32 IKVINSSARRIGYGIKTINMKRLGVDPPCGVLDPKEAVLLAVSCDA 77
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2
SV=2
Length = 126
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+++IN + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2
SV=2
Length = 126
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 31 LKVINNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQA 76
+++IN + F KTT PK+ + P GV+ P +S + ++ A
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAISCDA 76
>sp|O84060|ISPG_CHLTR 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=ispG PE=3 SV=1
Length = 602
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 62 VQPWDSCIIRVTLQAQRESPPDMQCKDKFLLQSTIVPSNTDVDDLP 107
+Q W I+RVT+Q RE KD+ + Q+ +P D+ P
Sbjct: 53 LQEWGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADIHFFP 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,815,324
Number of Sequences: 539616
Number of extensions: 2028643
Number of successful extensions: 3668
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3597
Number of HSP's gapped (non-prelim): 69
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)