Query 032886
Match_columns 131
No_of_seqs 138 out of 1109
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 11:24:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 7E-31 2.4E-35 203.8 12.3 105 21-131 16-138 (245)
2 1n10_A PHL P I, pollen allerge 100.0 8.6E-31 2.9E-35 202.9 11.2 103 21-131 16-138 (241)
3 3d30_A YOAJ, expansin like pro 100.0 2.3E-30 7.7E-35 196.7 10.5 97 22-131 4-106 (208)
4 1wc2_A Endoglucanase; hydrolas 99.9 4.1E-26 1.4E-30 168.6 7.0 107 23-131 13-155 (181)
5 4avr_A PA4485; unknown functio 99.8 1E-19 3.6E-24 122.4 11.7 90 25-131 2-94 (95)
6 1bw3_A Barwin, basic barley SE 99.8 1.7E-21 6E-26 136.9 1.0 94 24-131 3-121 (125)
7 2kqa_A Cerato-platanin; elicit 98.8 2.4E-08 8.1E-13 70.1 8.0 68 48-131 49-119 (129)
8 3m3g_A EPL1 protein; fungal, p 98.7 1.6E-08 5.3E-13 70.4 5.0 67 48-131 43-113 (120)
9 3sul_A Cerato-platanin-like pr 98.7 2.1E-08 7.2E-13 69.9 5.6 67 50-131 45-115 (122)
10 3suj_A Cerato-platanin 1; doub 98.7 2.5E-08 8.6E-13 70.0 5.0 72 48-131 43-118 (127)
11 3suk_A Cerato-platanin-like pr 98.7 2.4E-08 8.1E-13 70.0 4.7 71 48-131 44-118 (125)
12 3sum_A Cerato-platanin-like pr 98.6 2.1E-07 7.2E-12 65.7 7.8 66 46-131 45-120 (136)
13 2eng_A Endoglucanase V; cellul 96.0 0.0066 2.3E-07 45.5 4.0 40 63-110 84-124 (210)
14 3nrl_A Uncharacterized protein 75.5 6.1 0.00021 25.1 4.8 18 56-73 24-41 (81)
15 2hm3_A Nematocyst outer WALL a 31.2 17 0.00057 18.4 0.8 10 94-103 4-13 (31)
16 2vqe_N 30S ribosomal protein S 27.3 17 0.0006 21.6 0.6 36 92-128 18-61 (61)
17 2lif_A Core protein P21; signa 30.4 16 0.00054 18.4 0.0 19 2-20 3-21 (27)
18 3bbn_N Ribosomal protein S14; 24.5 4.8 0.00016 26.5 -2.5 40 88-128 53-100 (100)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=99.97 E-value=7e-31 Score=203.83 Aligned_cols=105 Identities=29% Similarity=0.494 Sum_probs=92.5
Q ss_pred ccceeeEEEEEECCCC------CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeE
Q 032886 21 AVHAAQGNAVYYKPPY------SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSV 90 (131)
Q Consensus 21 ~~~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v 90 (131)
...|..|+||||+.++ .+||| |++. +++.++||+|+.+|++|..||+||||+|.+ ++.|+ +++|
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-----~~~C~-~~sv 89 (245)
T 2hcz_X 16 NGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-----KPECS-GNPV 89 (245)
T ss_dssp CCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-----SSSBC-SSCE
T ss_pred CCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-----CCccC-CCCE
Confidence 3679999999999986 37999 7764 468999999999999999999999999975 34798 8999
Q ss_pred EEEEEeccCCCCC-CcEEcCHHHHHhhcC-------CCCcEEEEEEEEC
Q 032886 91 VVKVVDYCRQPCN-GILNLSQDAFNEIAD-------LDAGKVIVEYNPV 131 (131)
Q Consensus 91 ~v~V~D~Cp~~C~-~~lDLS~~aF~~la~-------~~~G~v~v~w~~V 131 (131)
+|+|||+||+.++ .|||||+.||++||+ ++.|+|+|+||||
T Consensus 90 ~V~VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV 138 (245)
T 2hcz_X 90 TVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV 138 (245)
T ss_dssp EEEEEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEE
T ss_pred EEEEEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEE
Confidence 9999999992114 999999999999998 7899999999997
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=99.97 E-value=8.6e-31 Score=202.88 Aligned_cols=103 Identities=24% Similarity=0.532 Sum_probs=89.5
Q ss_pred ccceeeEEEEEECCCC------CCCCC-CCCC---CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeE
Q 032886 21 AVHAAQGNAVYYKPPY------SHSAC-YGNQ---DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSV 90 (131)
Q Consensus 21 ~~~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v 90 (131)
.+.|.+|+||||+.++ .+||| |++. +.+.++||+|+.+|++|..||+||||+|.+ ++.|. +++|
T Consensus 16 ~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~-----~~~C~-~~~v 89 (241)
T 1n10_A 16 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACS-GEPV 89 (241)
T ss_dssp CCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBC-SCCE
T ss_pred cCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC-----CCccC-CCCE
Confidence 3679999999999875 37999 7774 568999999999999999999999999975 34698 8899
Q ss_pred EEEEEeccCCCC--C-CcEEcCHHHHHhhcC-------CCCcEEEEEEEEC
Q 032886 91 VVKVVDYCRQPC--N-GILNLSQDAFNEIAD-------LDAGKVIVEYNPV 131 (131)
Q Consensus 91 ~v~V~D~Cp~~C--~-~~lDLS~~aF~~la~-------~~~G~v~v~w~~V 131 (131)
+|+|||+|+ | + .|||||+.||.+||+ ++.|+|+|+||||
T Consensus 90 ~V~VtD~C~--C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV 138 (241)
T 1n10_A 90 VVHITDDNE--EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 138 (241)
T ss_dssp EEEEEEECS--SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred EEEEeEecC--CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEE
Confidence 999999997 5 2 999999999999998 6899999999998
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=99.97 E-value=2.3e-30 Score=196.69 Aligned_cols=97 Identities=25% Similarity=0.332 Sum_probs=88.4
Q ss_pred cceeeEEEEEECCCCCCCCC-CCCCCCCceEEEeccccccCC----cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEe
Q 032886 22 VHAAQGNAVYYKPPYSHSAC-YGNQDNGPMVTGVSDALWRNG----QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVD 96 (131)
Q Consensus 22 ~~~~~G~aT~Y~~~~~~gaC-~~~~~~~~~~aA~s~~~~~~g----~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D 96 (131)
.+.++|+||||++...+||| +...+++.++||+|+.+|++| +.||+||||+| . +++|+|+|+|
T Consensus 4 ~~~~~G~aT~Y~~g~~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~-----------~-~gsv~V~v~D 71 (208)
T 3d30_A 4 DDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG-----------P-KGKTTVYVTD 71 (208)
T ss_dssp TCCEEEEEEECSTTSSSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE-----------T-TEEEEEEEEE
T ss_pred CCcEEEEEEEcCCCCCCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe-----------C-CCcEEEEEEE
Confidence 46789999999997779999 554567899999999999987 79999999998 2 5689999999
Q ss_pred ccCCCCC-CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886 97 YCRQPCN-GILNLSQDAFNEIADLDAGKVIVEYNPV 131 (131)
Q Consensus 97 ~Cp~~C~-~~lDLS~~aF~~la~~~~G~v~v~w~~V 131 (131)
+|| +|+ +|||||+.||++|++++.|+++|+|++|
T Consensus 72 ~CP-~C~~~~~DLS~~aF~~la~~~~G~i~v~~~~V 106 (208)
T 3d30_A 72 LYP-EGARGALDLSPNAFRKIGNMKDGKINIKWRVV 106 (208)
T ss_dssp ECT-TCCTTCEEECHHHHHHHSCGGGSSEEEEEEEE
T ss_pred CCC-CCCCCeEECCHHHHHHhcccCCCEEEEEEEEe
Confidence 999 899 9999999999999999999999999997
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.93 E-value=4.1e-26 Score=168.61 Aligned_cols=107 Identities=21% Similarity=0.402 Sum_probs=88.4
Q ss_pred ceeeEEEEEECCCCCCCCC-CCC-----C---CCCceEEEeccccccCC------cCCCCeEEEEEccCCCC-CCCCCCC
Q 032886 23 HAAQGNAVYYKPPYSHSAC-YGN-----Q---DNGPMVTGVSDALWRNG------QACGKRYRVRCIRGANQ-APHPCKP 86 (131)
Q Consensus 23 ~~~~G~aT~Y~~~~~~gaC-~~~-----~---~~~~~~aA~s~~~~~~g------~~CG~c~~v~~~~~~~~-~~~~c~~ 86 (131)
-|..+.||||+.. .+||| |++ . +.+.++||||+.+|++| +.||+||||+|++.... .+..|.+
T Consensus 13 g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~ 91 (181)
T 1wc2_A 13 GKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE 91 (181)
T ss_dssp TEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred CccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCC
Confidence 4788999999996 68999 883 2 24889999999999997 89999999999763200 0123456
Q ss_pred CCeEEEEEEeccCC------CCC--------------CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886 87 GNSVVVKVVDYCRQ------PCN--------------GILNLSQDAFNEIADLDAGKVIVEYNPV 131 (131)
Q Consensus 87 g~~v~v~V~D~Cp~------~C~--------------~~lDLS~~aF~~la~~~~G~v~v~w~~V 131 (131)
|++|+|+|||+||. +|+ .|||||..| .+|+....|+++|+||||
T Consensus 92 g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV 155 (181)
T 1wc2_A 92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVV 155 (181)
T ss_dssp TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEE
T ss_pred CCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEE
Confidence 88999999999993 583 599999999 899998999999999998
No 5
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.82 E-value=1e-19 Score=122.37 Aligned_cols=90 Identities=22% Similarity=0.280 Sum_probs=79.9
Q ss_pred eeEEEEEECCCC--CCCCCCCCCCCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCC
Q 032886 25 AQGNAVYYKPPY--SHSACYGNQDNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPC 102 (131)
Q Consensus 25 ~~G~aT~Y~~~~--~~gaC~~~~~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C 102 (131)
..|.|+||++.. ...||+..++.+.++||+.+ .+||..++||+.. + ||+|+|+|+|+|| .|
T Consensus 2 ~~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~t------lP~gt~vrVtNl~---------n-GksVvVrVnDRGP-~~ 64 (95)
T 4avr_A 2 DTGEASYYGSRHAGLRTASGERYNPNAMTAAHRT------LPFGARVRVTNLD---------N-RRSVVVRINDRGP-FR 64 (95)
T ss_dssp EEEEEEECCGGGTTSBCTTSCBCCTTSCEEECSS------SCTTCEEEEEETT---------T-CCEEEEEEEECCC-CS
T ss_pred CEEEEEEECCccCCCCCCCccCcCCCCCEEEcCC------CCCCcEEEEEECC---------C-CcEEEEEEccCCC-CC
Confidence 579999999864 36888777888999999974 4799999999865 5 9999999999999 78
Q ss_pred C-CcEEcCHHHHHhhcCCCCcEEEEEEEEC
Q 032886 103 N-GILNLSQDAFNEIADLDAGKVIVEYNPV 131 (131)
Q Consensus 103 ~-~~lDLS~~aF~~la~~~~G~v~v~w~~V 131 (131)
. ..||||+.||++|+..+.|+.+|+|+.+
T Consensus 65 ~griIDLS~aAa~~Lg~~~~G~~~V~ve~~ 94 (95)
T 4avr_A 65 RGRIIDVSRKAAEGLGMIRSGVAPVRIESL 94 (95)
T ss_dssp TTEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred CCCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence 8 8899999999999999999999999875
No 6
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.81 E-value=1.7e-21 Score=136.91 Aligned_cols=94 Identities=30% Similarity=0.486 Sum_probs=70.0
Q ss_pred eeeEEEEE--ECCCC---------CCCCCCCCCCCCceEEEeccccc---------cCCcCCCCeEEEEEccCCCCCCCC
Q 032886 24 AAQGNAVY--YKPPY---------SHSACYGNQDNGPMVTGVSDALW---------RNGQACGKRYRVRCIRGANQAPHP 83 (131)
Q Consensus 24 ~~~G~aT~--Y~~~~---------~~gaC~~~~~~~~~~aA~s~~~~---------~~g~~CG~c~~v~~~~~~~~~~~~ 83 (131)
..+-+||| |.+.. ..++|.. ...+...++.+...| ++++.||+|++|++..
T Consensus 3 ~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t-~da~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~-------- 73 (125)
T 1bw3_A 3 ANDVRATYHYYRPAQNNWDLGAPAVSAYCAT-WDASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA-------- 73 (125)
T ss_dssp EEEEEEECCCSSCGGGTTCTTSTTTCCTTHH-HHTTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT--------
T ss_pred ccceEEEEEEecCCCcCcccccceeeEeeec-ccCCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC--------
Confidence 34567785 66621 3588843 212223344444444 6678999999999853
Q ss_pred CCCCCeEEEEEEeccCCCCCCcEEcC-HHHHHhhcC----CCCcEEEEEEEEC
Q 032886 84 CKPGNSVVVKVVDYCRQPCNGILNLS-QDAFNEIAD----LDAGKVIVEYNPV 131 (131)
Q Consensus 84 c~~g~~v~v~V~D~Cp~~C~~~lDLS-~~aF~~la~----~~~G~v~v~w~~V 131 (131)
+ |++|+|+|+|+|| .| +|||| +.||++|+. ++.|+++|+|++|
T Consensus 74 -n-GksV~V~VvD~CP-~g--gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V 121 (125)
T 1bw3_A 74 -T-GAQITARIVDQCA-NG--GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV 121 (125)
T ss_dssp -T-TEEEEEEEEECCS-SS--SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred -C-CCEEEEEEEEeCC-CC--CCCCCCHHHHHHHhccCCcccCcEEEEEEEEE
Confidence 4 8999999999999 65 49999 999999998 6799999999987
No 7
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.78 E-value=2.4e-08 Score=70.08 Aligned_cols=68 Identities=37% Similarity=0.648 Sum_probs=57.5
Q ss_pred CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC-CCCcEE-
Q 032886 48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD-LDAGKV- 124 (131)
Q Consensus 48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~-~~~G~v- 124 (131)
-.++.+... ..|+ .+.||+|+||+.. + |++|.++.+|.-+ +.|+++.+||++|++ ...|+|
T Consensus 49 FP~IGga~~iagWN-S~~CGtC~~lty~----------n-g~sI~vlaID~A~----~gFnIs~~Amn~LT~G~~lG~V~ 112 (129)
T 2kqa_A 49 FPNVGGIPDIAGWD-SPSCGTCWKVTIP----------N-GNSIFIRGVDSGR----GGFNVNPTAFTKLVGSTEAGRVD 112 (129)
T ss_dssp SSSEEEETTCCSTT-CTTCSCEEEEEET----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHSSSSSCCBC
T ss_pred CCeeccchhhccCC-CCCCCceEEEEEc----------C-CCEEEEEEEccCC----CceeehHHHHHHhcCCcccCcEe
Confidence 355555543 4576 6899999999983 3 8999999999999 789999999999986 788999
Q ss_pred EEEEEEC
Q 032886 125 IVEYNPV 131 (131)
Q Consensus 125 ~v~w~~V 131 (131)
+++|++|
T Consensus 113 ~a~~~qV 119 (129)
T 2kqa_A 113 NVNYVQV 119 (129)
T ss_dssp SCEEEEC
T ss_pred EEEEEEc
Confidence 9999987
No 8
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.70 E-value=1.6e-08 Score=70.40 Aligned_cols=67 Identities=25% Similarity=0.499 Sum_probs=54.9
Q ss_pred CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcC-C--CCcE
Q 032886 48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIAD-L--DAGK 123 (131)
Q Consensus 48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~-~--~~G~ 123 (131)
-.++.+... .-|+ .+.||.|+|++. + |++|.|..+|.-+ ..|++|.+||+.|++ . ..|+
T Consensus 43 FP~IGg~~~i~gwn-s~~CGtC~~lty-----------~-g~si~vlaID~a~----~Gfnis~~A~n~LT~G~a~~lG~ 105 (120)
T 3m3g_A 43 FPYIGGAAAVAGWN-SASCGTCWKLQY-----------S-GHTIYVLAVDHAA----SGFNIALDAMNALTGGQAVQLGR 105 (120)
T ss_dssp TTSEEEETTCCSTT-CTTTTCEEEEEE-----------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCE
T ss_pred CCccccccccccCC-CCCCCceEEEEE-----------C-CeEEEEEEEecCC----CceeecHHHHHHhhCCcceeeee
Confidence 345655543 3465 478999999998 4 8999999999998 789999999999985 3 3499
Q ss_pred EEEEEEEC
Q 032886 124 VIVEYNPV 131 (131)
Q Consensus 124 v~v~w~~V 131 (131)
|+++|++|
T Consensus 106 V~a~~~~V 113 (120)
T 3m3g_A 106 VSATATQV 113 (120)
T ss_dssp EECEEEEE
T ss_pred EeEEEEEc
Confidence 99999986
No 9
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.70 E-value=2.1e-08 Score=69.93 Aligned_cols=67 Identities=24% Similarity=0.422 Sum_probs=55.2
Q ss_pred eEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcEEE
Q 032886 50 MVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGKVI 125 (131)
Q Consensus 50 ~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~v~ 125 (131)
++.+... .-|++ +.||.|+|++... + ||+|.+..+|.-+ ..|+||.+||+.|++- +.|+|+
T Consensus 45 FIGg~~~V~gwnS-~~CGtC~~lty~~---------~-g~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V~ 109 (122)
T 3sul_A 45 YVGAVDTITGWNS-ESCGTCYQITWSG---------T-GKTIHVVGVDVAG----NGFNVGQRAMDDLTNGQAVALGNID 109 (122)
T ss_dssp EEEEETTCCSTTC-TTTTCEEEEEETT---------T-TEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSEEE
T ss_pred ccccccccccCCC-CCCCceEEEEEcC---------C-CcEEEEEEEecCC----CceeehHHHHHHhcCCcceecceEe
Confidence 3655543 45765 8999999999842 3 8999999999999 7899999999999852 359999
Q ss_pred EEEEEC
Q 032886 126 VEYNPV 131 (131)
Q Consensus 126 v~w~~V 131 (131)
++|++|
T Consensus 110 a~~~qV 115 (122)
T 3sul_A 110 VTATLV 115 (122)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999986
No 10
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.66 E-value=2.5e-08 Score=69.96 Aligned_cols=72 Identities=22% Similarity=0.378 Sum_probs=55.4
Q ss_pred CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcE
Q 032886 48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGK 123 (131)
Q Consensus 48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~ 123 (131)
-.++.+... .-|+ .+.||.|+|++..+.+ ...++|.|..+|.-+ ..|+||.+||+.|++- ..|+
T Consensus 43 FP~IGg~~~i~gwn-s~~CGtC~~lty~g~~-------~~~~si~vlaID~a~----~Gfnis~~Amn~LT~g~a~~lG~ 110 (127)
T 3suj_A 43 FPCIGGSSDIAGYN-SPNCGSCYQLTYSSAH-------TTPKSIYMVAIDRSA----EGFTASKQAMDDLTNKRAEELGT 110 (127)
T ss_dssp TTSEEEETTCCSTT-CTTTTCEEEEEECCSS-------SCCEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSS
T ss_pred CCeeccccccccCC-CCCCCceEEEEECCCC-------CcceEEEEEEEecCC----CceeecHHHHHHhcCCcccccee
Confidence 345555542 3465 4789999999995321 124899999999999 7899999999999853 3589
Q ss_pred EEEEEEEC
Q 032886 124 VIVEYNPV 131 (131)
Q Consensus 124 v~v~w~~V 131 (131)
|+++|++|
T Consensus 111 V~~~~~~V 118 (127)
T 3suj_A 111 VNVDVRKV 118 (127)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999986
No 11
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.65 E-value=2.4e-08 Score=69.96 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=55.7
Q ss_pred CceEEEecc-ccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCcEEcCHHHHHhhcCC---CCcE
Q 032886 48 GPMVTGVSD-ALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGILNLSQDAFNEIADL---DAGK 123 (131)
Q Consensus 48 ~~~~aA~s~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~lDLS~~aF~~la~~---~~G~ 123 (131)
-.++.+... .-|+ .+.||.|+|++..+.. . .|+|.|..+|.-+ ..|+||.+||+.|++- +.|+
T Consensus 44 FP~IGg~~~i~gwn-S~~CGtC~~lty~g~~-------~-~~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~ 110 (125)
T 3suk_A 44 FPHIGASSDIGGFN-SPACGNCYTISFTFQG-------V-TRSINLVAIDHAG----NGFNVAQAAMDELTNGNAVALGT 110 (125)
T ss_dssp TTSEEEETTCCSTT-CTTTTCEEEEEEEETT-------E-EEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCE
T ss_pred CCeeccccccccCC-CCCCCeeEEEEEcCCC-------c-ceEEEEEEEecCC----CceeecHHHHHHhcCCcccccce
Confidence 355665553 3465 4789999999984311 1 4999999999998 7899999999999862 3599
Q ss_pred EEEEEEEC
Q 032886 124 VIVEYNPV 131 (131)
Q Consensus 124 v~v~w~~V 131 (131)
|+++|++|
T Consensus 111 V~~~~~~V 118 (125)
T 3suk_A 111 IDVQSQQV 118 (125)
T ss_dssp EEEEEEEE
T ss_pred EeEEEEEc
Confidence 99999986
No 12
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=98.57 E-value=2.1e-07 Score=65.71 Aligned_cols=66 Identities=24% Similarity=0.328 Sum_probs=54.2
Q ss_pred CCCceEEEeccccccCCcCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCCCc--EEcCHHHHHhhcCC----
Q 032886 46 DNGPMVTGVSDALWRNGQACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCNGI--LNLSQDAFNEIADL---- 119 (131)
Q Consensus 46 ~~~~~~aA~s~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~~~--lDLS~~aF~~la~~---- 119 (131)
+.-..+.+.. |+ ...||.|+||++ + |++|.|..+|.-. +. ||||.+||+.|++-
T Consensus 45 p~FP~igg~~---wn-s~~CGtCwkLtY-----------~-G~sI~vlaID~a~----~g~~FnIs~~Amn~LT~G~~a~ 104 (136)
T 3sum_A 45 LNFPHFVAAP---EA-QTECGSCWKLRY-----------K-GNHAFVTVVDRVE----EANLFVGGTDLVKNLTTFNGAP 104 (136)
T ss_dssp TTTTSEEECC---BT-TBCTTCEEEEEE-----------T-TEEEEEEEEECCC----STTEEEECHHHHHHHTCBTTBC
T ss_pred CCCCcccccc---cC-CCCCCceEEEEE-----------C-CeEEEEEEEecCC----CcceEeehHHHHHHHhCCCccc
Confidence 3334566654 54 578999999998 4 8999999999998 67 99999999999853
Q ss_pred ---CCcEEEE-EEEEC
Q 032886 120 ---DAGKVIV-EYNPV 131 (131)
Q Consensus 120 ---~~G~v~v-~w~~V 131 (131)
+.|+|++ +|++|
T Consensus 105 ~a~elG~Vda~~~~qV 120 (136)
T 3sum_A 105 EGYDWGTAQLFSAYQV 120 (136)
T ss_dssp HHHHHSEEECSEEEEE
T ss_pred cceecceeeeeEEEEc
Confidence 2599999 99986
No 13
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=95.95 E-value=0.0066 Score=45.52 Aligned_cols=40 Identities=18% Similarity=0.273 Sum_probs=29.3
Q ss_pred cCCCCeEEEEEccCCCCCCCCCCCCCeEEEEEEeccCCCCC-CcEEcCH
Q 032886 63 QACGKRYRVRCIRGANQAPHPCKPGNSVVVKVVDYCRQPCN-GILNLSQ 110 (131)
Q Consensus 63 ~~CG~c~~v~~~~~~~~~~~~c~~g~~v~v~V~D~Cp~~C~-~~lDLS~ 110 (131)
..|++||+++-++.. .+ ||+.+|+|++... .=. +||||.-
T Consensus 84 ~~Cc~C~~LtFt~~~------~~-GKkmiVQ~TNtG~-Dl~~n~FDl~i 124 (210)
T 2eng_A 84 GWCCACYELTFTSGP------VA-GKKMVVQSTSTGG-DLGSNHFDLNI 124 (210)
T ss_dssp HHTTCEEEEEECSGG------GT-TCEEEEEEEEC------CCEEEEEC
T ss_pred cccceeEEEEEcCCC------cC-CCEEEEEEecccC-CCCCCceeEec
Confidence 469999999997642 24 9999999999997 433 9999863
No 14
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=75.51 E-value=6.1 Score=25.10 Aligned_cols=18 Identities=22% Similarity=0.525 Sum_probs=14.6
Q ss_pred cccccCCcCCCCeEEEEE
Q 032886 56 DALWRNGQACGKRYRVRC 73 (131)
Q Consensus 56 ~~~~~~g~~CG~c~~v~~ 73 (131)
...|..|..||.|++|.-
T Consensus 24 ~~~~ygGlHCGE~feV~v 41 (81)
T 3nrl_A 24 LESFYGGLHCGECFDVKV 41 (81)
T ss_dssp TTEECCCCCTTCEEEEEE
T ss_pred cccccCCcccccEEEEEE
Confidence 345667899999999986
No 15
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=31.16 E-value=17 Score=18.36 Aligned_cols=10 Identities=20% Similarity=0.763 Sum_probs=3.4
Q ss_pred EEeccCCCCC
Q 032886 94 VVDYCRQPCN 103 (131)
Q Consensus 94 V~D~Cp~~C~ 103 (131)
|+..||.+|.
T Consensus 4 itgtcpsgcs 13 (31)
T 2hm3_A 4 ITGTCPSGCS 13 (31)
T ss_dssp ---CCCTTCC
T ss_pred ccccCCCCcC
Confidence 4455554443
No 16
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=27.31 E-value=17 Score=21.61 Aligned_cols=36 Identities=19% Similarity=0.371 Sum_probs=27.9
Q ss_pred EEEEeccCCCCC------CcEEcCHHHHHhhcC--CCCcEEEEEE
Q 032886 92 VKVVDYCRQPCN------GILNLSQDAFNEIAD--LDAGKVIVEY 128 (131)
Q Consensus 92 v~V~D~Cp~~C~------~~lDLS~~aF~~la~--~~~G~v~v~w 128 (131)
+.+.++|. -|+ ..|.|+.-.|.++|. .=.|+..-+|
T Consensus 18 ~r~~nRC~-~~GR~rg~iRkfglcR~~FRe~A~~g~lpGv~KasW 61 (61)
T 2vqe_N 18 VRAYTRCV-RCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61 (61)
T ss_dssp GGCCCCCT-TTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred CCCceeee-cCCCCceeeccCceeHHHHHHHHhCCccCCeEeeeC
Confidence 44778888 776 678899999999985 4468777666
No 17
>2lif_A Core protein P21; signal peptide, E1 envelope protein, transmemb membrane protein, viral protein; NMR {Hepatitis c virus jfh-1}
Probab=30.41 E-value=16 Score=18.42 Aligned_cols=19 Identities=16% Similarity=0.363 Sum_probs=10.7
Q ss_pred chhHHHHHHHHHHHHHhhc
Q 032886 2 GIEMRIFMMISIVLCLCSA 20 (131)
Q Consensus 2 ~~~~~~~~~~~~~~~l~s~ 20 (131)
|..|+++++.++..+..++
T Consensus 3 gcsfsiFlLaLlscLt~Pa 21 (27)
T 2lif_A 3 GFPFSIFLLALLSCITVPV 21 (27)
Confidence 3456777766664444344
No 18
>3bbn_N Ribosomal protein S14; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=24.55 E-value=4.8 Score=26.52 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=30.7
Q ss_pred CeEEEEEEeccCCCCC------CcEEcCHHHHHhhcCC--CCcEEEEEE
Q 032886 88 NSVVVKVVDYCRQPCN------GILNLSQDAFNEIADL--DAGKVIVEY 128 (131)
Q Consensus 88 ~~v~v~V~D~Cp~~C~------~~lDLS~~aF~~la~~--~~G~v~v~w 128 (131)
.+--+.+.++|. -|+ ..|.||.-.|.++|.. =.|+..-+|
T Consensus 53 ns~~~r~~nRC~-~tGR~rg~~r~fglsR~~fRe~a~~g~lpGv~KssW 100 (100)
T 3bbn_N 53 NSAPARLHRRCF-LTGRPRANIRDFGLSGHILREMVHTCLLPGATRSSW 100 (100)
T ss_dssp SCCGGGCCCCCS-SSCCSSSBCTTTCSBTTHHHHHHTTTCSSSCEECCC
T ss_pred cccccccccccc-CCCCCceeecccCcHHHHHHHHHHcCCCCCeeeccC
Confidence 344466889998 776 6899999999999864 368777666
Done!