BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032889
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224059650|ref|XP_002299952.1| predicted protein [Populus trichocarpa]
gi|224104033|ref|XP_002313290.1| predicted protein [Populus trichocarpa]
gi|118483640|gb|ABK93714.1| unknown [Populus trichocarpa]
gi|222847210|gb|EEE84757.1| predicted protein [Populus trichocarpa]
gi|222849698|gb|EEE87245.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/99 (97%), Positives = 99/99 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
>gi|351720779|ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
gi|255628715|gb|ACU14702.1| unknown [Glycine max]
Length = 99
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/99 (96%), Positives = 97/99 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG+
Sbjct: 61 TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS 99
>gi|388507056|gb|AFK41594.1| unknown [Medicago truncatula]
Length = 99
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/99 (96%), Positives = 97/99 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61 TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99
>gi|356512406|ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 99
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/99 (95%), Positives = 97/99 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDG+
Sbjct: 61 TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99
>gi|359487263|ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Vitis vinifera]
gi|359487265|ref|XP_003633552.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2
[Vitis vinifera]
gi|359487267|ref|XP_003633553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 3
[Vitis vinifera]
gi|359487269|ref|XP_003633554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 4
[Vitis vinifera]
Length = 99
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/99 (95%), Positives = 97/99 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDP KT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>gi|449463763|ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus]
gi|449463765|ref|XP_004149602.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2
[Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Cucumis sativus]
gi|449530744|ref|XP_004172353.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2
[Cucumis sativus]
Length = 99
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/99 (95%), Positives = 96/99 (96%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGLIVCRGTAVMLVSP DGTDEIANPF+QPDGA
Sbjct: 61 TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99
>gi|297736225|emb|CBI24863.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/103 (92%), Positives = 99/103 (96%)
Query: 29 KSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
++L SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DD
Sbjct: 5 ETLFQSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDD 64
Query: 89 PLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
P KTTDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 65 PQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107
>gi|255544228|ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
gi|223547674|gb|EEF49167.1| conserved hypothetical protein [Ricinus communis]
Length = 99
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 97/99 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE+LRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR+LGLIVCRGTAVMLVSPTDGTDEIANPF+Q DGA
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQQDGA 99
>gi|388499482|gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 95/99 (95%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
T QTR LGLIVCRGTAVMLVSPTDGTDEI NPF+QPDGA
Sbjct: 61 TAQTRSLGLIVCRGTAVMLVSPTDGTDEIENPFIQPDGA 99
>gi|297814702|ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
gi|297321072|gb|EFH51493.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
Length = 99
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/97 (92%), Positives = 95/97 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF+RD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TDQTR+LGLIVCRGTAVMLVSPTDGT+EIANPF+Q +
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQAE 97
>gi|15227722|ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|27765062|gb|AAO23652.1| At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/94 (94%), Positives = 93/94 (98%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF+RD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TDQTR+LGLIVCRGTAVMLVSPTDGT+EIANPF+
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFV 94
>gi|356544192|ref|XP_003540538.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 97
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 93/99 (93%), Gaps = 2/99 (2%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQ GTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQ--GTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 58
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQ R LGLIV RGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 59 TDQNRSLGLIVFRGTAVMLVSPTDGTDEIANPFIQPDGA 97
>gi|294463208|gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKF+DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA+EFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGLIVCRGTAVMLV+PTDGTDEI NPF Q D A
Sbjct: 61 TDQTRPLGLIVCRGTAVMLVAPTDGTDEIPNPF-QTDAA 98
>gi|357505733|ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
Length = 130
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 97/130 (74%), Gaps = 31/130 (23%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQ-------------------------------V 61
MSGRKETVLDLAKFVDKGVQVKLTGGRQ V
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQGNGSCPLIAGGIGVVSECDGCDITYSPVKINV 60
Query: 62 TGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEI 121
TGTLKGYDQLLNLVLDEAVEFLRD DDPLKTTDQTR LGLIVCRGTAVMLVSPTDGTDEI
Sbjct: 61 TGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGLIVCRGTAVMLVSPTDGTDEI 120
Query: 122 ANPFMQPDGA 131
ANPF+QPDGA
Sbjct: 121 ANPFLQPDGA 130
>gi|115475055|ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|38636805|dbj|BAD03046.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|38636982|dbj|BAD03242.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|113623093|dbj|BAF23038.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|218200565|gb|EEC82992.1| hypothetical protein OsI_28028 [Oryza sativa Indica Group]
Length = 98
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/99 (90%), Positives = 93/99 (93%), Gaps = 1/99 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF R+ DDPLK
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFEREQDDPLKL 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
+ +TRQLGLIVCRGTAVMLVSPTDGTDEIANPF Q DGA
Sbjct: 61 SGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPF-QSDGA 98
>gi|168012739|ref|XP_001759059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689758|gb|EDQ76128.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 90/94 (95%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVD+GV VKL+GGRQVTGTLKGYDQLLNLVLDEA E LRD+DDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDRGVSVKLSGGRQVTGTLKGYDQLLNLVLDEATENLRDSDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TDQ RQLGLIVCRGTAVMLV+PTDGT+EIANPF+
Sbjct: 61 TDQMRQLGLIVCRGTAVMLVAPTDGTEEIANPFL 94
>gi|357166207|ref|XP_003580635.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 100
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/98 (86%), Positives = 90/98 (91%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R+ DDPLK
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
+ +TRQLGLIVCRGTAVMLVSPTDGTDEIANPF+ DG
Sbjct: 61 STKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLAADG 98
>gi|302786868|ref|XP_002975205.1| hypothetical protein SELMODRAFT_415303 [Selaginella moellendorffii]
gi|302791693|ref|XP_002977613.1| hypothetical protein SELMODRAFT_417493 [Selaginella moellendorffii]
gi|300154983|gb|EFJ21617.1| hypothetical protein SELMODRAFT_417493 [Selaginella moellendorffii]
gi|300157364|gb|EFJ23990.1| hypothetical protein SELMODRAFT_415303 [Selaginella moellendorffii]
Length = 101
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 91/99 (91%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS RKETVLDLAKF+DKGV VKL+GGRQV GTLKGYDQLLNLVLDEAVE+LRD DDPLKT
Sbjct: 1 MSNRKETVLDLAKFIDKGVCVKLSGGRQVIGTLKGYDQLLNLVLDEAVEYLRDHDDPLKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
TDQTR LGL+VCRGTAVMLV+PTDGT+EIANPF+ D A
Sbjct: 61 TDQTRALGLVVCRGTAVMLVAPTDGTEEIANPFVTQDPA 99
>gi|357144783|ref|XP_003573412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 101
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 90/99 (90%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE +EF R+ DDPLK
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEVIEFEREQDDPLKL 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
+ +TRQLGLIVCRGTAVMLVSPT+GT+EI NPF DGA
Sbjct: 61 SAKTRQLGLIVCRGTAVMLVSPTEGTEEINNPFQDADGA 99
>gi|226530979|ref|NP_001152342.1| LSM7-like [Zea mays]
gi|195651475|gb|ACG45205.1| LSM7-like [Zea mays]
gi|195655329|gb|ACG47132.1| LSM7-like [Zea mays]
gi|414585245|tpg|DAA35816.1| TPA: LSM7-like protein [Zea mays]
Length = 98
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE+ R+ DDPLK
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYEREQDDPLKL 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+ +TRQLGLIVCRGTAVMLVSPTDGTDEIANPF+
Sbjct: 61 SGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFL 94
>gi|168045744|ref|XP_001775336.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673281|gb|EDQ59806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 89/95 (93%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKFVD+GV VKL+GGRQVTG LKGYDQLLNLVLDEA E LRD+DDP+KT
Sbjct: 1 MSGRKETVLDLAKFVDRGVSVKLSGGRQVTGILKGYDQLLNLVLDEATENLRDSDDPMKT 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TDQ RQLGLIVCRGTAVMLV+PTDGT+EI NPF+Q
Sbjct: 61 TDQIRQLGLIVCRGTAVMLVAPTDGTEEIPNPFLQ 95
>gi|242077336|ref|XP_002448604.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
gi|241939787|gb|EES12932.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
Length = 98
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 91/99 (91%), Gaps = 1/99 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R+ DDPLK
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
+ +TRQLGLIVCRGTAVMLVSPTDGTDEIANPF+ DGA
Sbjct: 61 SGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFL-ADGA 98
>gi|226530574|ref|NP_001148733.1| LSM7-like [Zea mays]
gi|195621704|gb|ACG32682.1| LSM7-like [Zea mays]
gi|413919649|gb|AFW59581.1| LSM7-like protein [Zea mays]
Length = 156
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/101 (85%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
Query: 31 LKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPL 90
++M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R+ DDPL
Sbjct: 57 VEMAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENEREQDDPL 116
Query: 91 KTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
K + +TRQLGLIVCRGTAVMLVSPTDGTDEIANPF+ DGA
Sbjct: 117 KLSGKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLA-DGA 156
>gi|255082277|ref|XP_002508357.1| predicted protein [Micromonas sp. RCC299]
gi|226523633|gb|ACO69615.1| predicted protein [Micromonas sp. RCC299]
Length = 104
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/98 (76%), Positives = 87/98 (88%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSG+KETVLDL KF+DKGV+VKL GGR+VTGTLKG+DQLLNLVLDE E+LRD +DPLK
Sbjct: 1 MSGKKETVLDLGKFIDKGVRVKLAGGREVTGTLKGFDQLLNLVLDECEEYLRDPEDPLKV 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TDQTR LGLIV RGT+VM+VS DG +EIANPF+QP+G
Sbjct: 61 TDQTRSLGLIVARGTSVMVVSGLDGMEEIANPFLQPEG 98
>gi|384247364|gb|EIE20851.1| U6 snRNA-associated Sm-like protein LSm7 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 87/97 (89%), Gaps = 1/97 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE LDLAKF+DKGV+VKL+GGR+V GTLKGYDQLLNLVLDE VE+LRD +D L+TT++
Sbjct: 3 RKENALDLAKFIDKGVRVKLSGGREVEGTLKGYDQLLNLVLDETVEYLRDKEDMLRTTNE 62
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIA-NPFMQPDGA 131
TR LGL+VCRGTAVM+VSPT GT+E+A NPFMQ DGA
Sbjct: 63 TRHLGLVVCRGTAVMMVSPTAGTEELAQNPFMQTDGA 99
>gi|307107960|gb|EFN56201.1| hypothetical protein CHLNCDRAFT_22477 [Chlorella variabilis]
Length = 101
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 85/98 (86%), Gaps = 1/98 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
M+GR KE+ LDLAKFVDK ++VKL GGR+V G LKGYDQLLNLVLDEAVE+LRD +DP++
Sbjct: 1 MAGRGKESALDLAKFVDKSIRVKLAGGREVVGVLKGYDQLLNLVLDEAVEYLRDPEDPMR 60
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TDQTR +GLIVCRGT+VMLV PT GT+EIANPF Q +
Sbjct: 61 VTDQTRPMGLIVCRGTSVMLVVPTAGTEEIANPFQQEE 98
>gi|303278768|ref|XP_003058677.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459837|gb|EEH57132.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 106
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 86/95 (90%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSG+KETVLDL KF+DKGV+VKL+GGR+VTGTLKG+DQLLNLVLDE VE LRD +DPLK
Sbjct: 1 MSGKKETVLDLGKFIDKGVRVKLSGGREVTGTLKGFDQLLNLVLDECVESLRDPEDPLKI 60
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+D+TR+LGLIVCRGT+VM+VS DG +EIANPF +
Sbjct: 61 SDKTRKLGLIVCRGTSVMVVSGLDGMEEIANPFTE 95
>gi|302840191|ref|XP_002951651.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
gi|300262899|gb|EFJ47102.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
Length = 108
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
MSG+ KE+ +DLAKFVDKGV+VKL GGR+V G LKGYDQLLNLVLDEAVE+LRD +DPL
Sbjct: 1 MSGKAKESAVDLAKFVDKGVRVKLAGGREVQGILKGYDQLLNLVLDEAVEYLRDPEDPLT 60
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TD+TR LGL+VCRGTAVMLV+P+ G +EIANPF+Q +
Sbjct: 61 VTDETRLLGLMVCRGTAVMLVAPSTGMEEIANPFLQKE 98
>gi|145349929|ref|XP_001419379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579610|gb|ABO97672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 100
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 84/94 (89%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
KETVLDLA+F+D+GV+VKL+GGR+VTGTLKGYDQLLNLVLDEA+E LRDA+D LK +D+T
Sbjct: 4 KETVLDLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISDET 63
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
R LGL+VCRGT+VM+VS D +EIANPF+ DG
Sbjct: 64 RALGLLVCRGTSVMVVSALDSMEEIANPFLAEDG 97
>gi|159490830|ref|XP_001703376.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
gi|158280300|gb|EDP06058.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
Length = 109
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 85/96 (88%), Gaps = 1/96 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
M+G+ KE+ +DLAKF+DKGV+VKL GGR+V G LKGYDQLLNLV+DEAVE+LRD +DPL
Sbjct: 1 MAGKAKESAVDLAKFIDKGVRVKLAGGREVQGILKGYDQLLNLVIDEAVEYLRDPEDPLT 60
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TD+TR LGL+VCRGTAVMLV+P+ G +EIANPF+Q
Sbjct: 61 VTDETRSLGLLVCRGTAVMLVAPSAGMEEIANPFLQ 96
>gi|301098772|ref|XP_002898478.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104903|gb|EEY62955.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 106
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 81/95 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RK+ +LDLAK++D+ V+VK GGR+VTGTLKGYDQL+NLVLD+ VEFLRD D + TD+
Sbjct: 12 RKDPILDLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLRDPSDEYRITDE 71
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR++GL+VCRGT+VMLVSP DGT EI NPF+Q +G
Sbjct: 72 TRKVGLVVCRGTSVMLVSPVDGTAEIPNPFLQQEG 106
>gi|348673388|gb|EGZ13207.1| hypothetical protein PHYSODRAFT_334991 [Phytophthora sojae]
Length = 106
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 81/95 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RK+ +LDLAK++D+ V+VK GGR+VTGTLKGYDQL+NLVLD+ VEFLRD +D + TD
Sbjct: 12 RKDPILDLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLRDPNDEYRITDD 71
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR++GL+VCRGT+VMLVSP DGT EI NPF+Q +G
Sbjct: 72 TRKVGLVVCRGTSVMLVSPVDGTAEIPNPFLQQEG 106
>gi|325188073|emb|CCA22616.1| U6 snRNAassociated Smlike protein putative [Albugo laibachii Nc14]
Length = 119
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 76/92 (82%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE +LDL K++D V VK GGRQV GTLKGYDQL+NLVLDE +EFLR+ +D + +D+
Sbjct: 25 RKENILDLDKYIDHSVCVKFRGGRQVHGTLKGYDQLVNLVLDECIEFLREDNDSYRLSDK 84
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR +GL+VCRGT VML+SP DGT+EIANPF+Q
Sbjct: 85 TRSIGLVVCRGTTVMLISPVDGTEEIANPFIQ 116
>gi|412993861|emb|CCO14372.1| U6 snRNA-associated Sm-like protein LSm7 [Bathycoccus prasinos]
Length = 119
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 76/90 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
K+TVLDL K++DKGV+VKL+GGR+V G LKG+DQLLNLVLDE E+LRD DDPL+ TD+
Sbjct: 23 HKQTVLDLGKYIDKGVRVKLSGGREVEGILKGFDQLLNLVLDETKEYLRDVDDPLRITDE 82
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGLIV RGT+VM+VSP DG EI NPF
Sbjct: 83 TRNLGLIVTRGTSVMVVSPLDGLKEIENPF 112
>gi|299473000|emb|CBN77401.1| Sm-like protein LSm7 [Ectocarpus siliculosus]
Length = 102
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 78/94 (82%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+ETVLDL K++D+GV+VKL GGR+V G LKG+D L+N+VLDE +EF+RD DP K T++T
Sbjct: 9 RETVLDLQKYLDQGVRVKLQGGREVHGVLKGFDPLVNVVLDECIEFIRDPTDPYKLTEET 68
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
R+LGL+VCRGT V L+SP DG +EI NPFM P+G
Sbjct: 69 RELGLVVCRGTQVSLISPRDGMEEIENPFMAPEG 102
>gi|156383890|ref|XP_001633065.1| predicted protein [Nematostella vectensis]
gi|156220130|gb|EDO41002.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 77/91 (84%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K+++ DL+KF+DKGV+VK GGR+ +G LKG+D LLNLVLD +E+LRD DDPLK +D+T
Sbjct: 9 KKSIFDLSKFLDKGVRVKFQGGREASGVLKGFDALLNLVLDNTIEYLRDPDDPLKLSDET 68
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
RQLGL+VCRGTAV+LV P DG + IANPF+Q
Sbjct: 69 RQLGLVVCRGTAVVLVCPMDGMEAIANPFIQ 99
>gi|427784749|gb|JAA57826.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 109
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 77/99 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A EFLRD DDP K
Sbjct: 11 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLRDPDDPYK 70
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TD TR LGL+VCRGTAV+++ P DG + I NPF+Q +G
Sbjct: 71 LTDDTRTLGLVVCRGTAVVVICPVDGMESIPNPFVQHEG 109
>gi|346470139|gb|AEO34914.1| hypothetical protein [Amblyomma maculatum]
Length = 107
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 77/99 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A EFLRD DDP K
Sbjct: 9 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLRDPDDPYK 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TD TR LGL+VCRGTAV+++ P DG + I NPF+Q +G
Sbjct: 69 LTDDTRTLGLVVCRGTAVVVICPVDGMESIPNPFVQHEG 107
>gi|294464784|gb|ADE77898.1| unknown [Picea sitchensis]
Length = 80
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGRKETVLDLAKF+DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA+EFLRD DDPLKT
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKT 60
Query: 93 TDQTRQLGLI 102
TDQTR LGLI
Sbjct: 61 TDQTRPLGLI 70
>gi|241244292|ref|XP_002402270.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215496302|gb|EEC05942.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442757953|gb|JAA71135.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 107
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 77/99 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A E+LRD DDP K
Sbjct: 9 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEYLRDPDDPYK 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
T+ TR LGL+VCRGTAV+++ P DG + I NPF+Q +G
Sbjct: 69 LTEDTRTLGLVVCRGTAVVVICPVDGMESIPNPFVQHEG 107
>gi|312068840|ref|XP_003137402.1| hypothetical protein LOAG_01816 [Loa loa]
Length = 130
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 77/91 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++RD +DP K T++
Sbjct: 40 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKVTEE 99
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TRQLGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 100 TRQLGLIVARGTAITVVAPNDGIEQIANPFV 130
>gi|402589800|gb|EJW83731.1| hypothetical protein WUBG_05358 [Wuchereria bancrofti]
Length = 101
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 79/100 (79%)
Query: 27 FLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
F K +KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++RD
Sbjct: 2 FEKEETARRKKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDT 61
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+DP K T++TRQLGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 62 EDPQKMTEETRQLGLIVARGTAITVVAPNDGIEQIANPFI 101
>gi|321464723|gb|EFX75729.1| hypothetical protein DAPPUDRAFT_306642 [Daphnia pulex]
Length = 116
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 77/94 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL++++DK ++VK TGGR+ G LKGYD LLN+VLD VE+LRD++D K ++
Sbjct: 23 KKERILDLSRYMDKLIRVKFTGGREAAGILKGYDPLLNIVLDNTVEYLRDSEDSFKLSED 82
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TRQLGL+VCRGTAV+L+ P DG + IANPF+QP+
Sbjct: 83 TRQLGLVVCRGTAVVLICPADGMEAIANPFIQPE 116
>gi|393907574|gb|EFO26665.2| hypothetical protein LOAG_01816 [Loa loa]
Length = 101
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 77/91 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++RD +DP K T++
Sbjct: 11 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKVTEE 70
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TRQLGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 71 TRQLGLIVARGTAITVVAPNDGIEQIANPFV 101
>gi|170585954|ref|XP_001897746.1| U6 snRNA-associated Sm-like protein LSm7 [Brugia malayi]
gi|158594770|gb|EDP33349.1| U6 snRNA-associated Sm-like protein LSm7, putative [Brugia malayi]
Length = 101
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 77/91 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++RD +DP K T++
Sbjct: 11 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKMTEE 70
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TRQLGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 71 TRQLGLIVARGTAITVVAPNDGIEQIANPFV 101
>gi|428181541|gb|EKX50404.1| hypothetical protein GUITHDRAFT_103637 [Guillardia theta CCMP2712]
Length = 98
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 77/96 (80%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
+ +K+ VLDL++ VD+ V+VK +GGR+V G LKG+D L+NLVLDE +E++RD DDP K T
Sbjct: 3 ADKKQAVLDLSRHVDQKVRVKFSGGREVEGRLKGFDTLVNLVLDECIEYIRDPDDPYKLT 62
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
++TRQLGLIVCRGTAV LV P DG EIANPF+ +
Sbjct: 63 NETRQLGLIVCRGTAVTLVCPCDGMMEIANPFISAE 98
>gi|260795474|ref|XP_002592730.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
gi|229277953|gb|EEN48741.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
Length = 116
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KET+LDL+K++DK ++VK GGR+ +G LKGYD LLNLVLD E+ RD DDP K T+
Sbjct: 22 KKETILDLSKYLDKPIRVKFHGGREASGVLKGYDPLLNLVLDNTTEYQRDPDDPFKLTED 81
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TRQLGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 82 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQEG 116
>gi|108743721|gb|ABG02169.1| IP12320p [Drosophila melanogaster]
Length = 287
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 190 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 249
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 250 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 285
>gi|169648011|gb|ACA62007.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALILICPQDGVESIANPFI 96
>gi|91089491|ref|XP_969723.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein
[Tribolium castaneum]
Length = 113
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 75/98 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LRD DDP K
Sbjct: 16 KEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPDDPYK 75
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
T+ TR LGL+VCRGT+V+L+ P DG + I NPF+ D
Sbjct: 76 LTEDTRALGLVVCRGTSVVLICPMDGMESIQNPFISQD 113
>gi|332374862|gb|AEE62572.1| unknown [Dendroctonus ponderosae]
Length = 116
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 77/102 (75%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD 87
++ K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LRD D
Sbjct: 15 MQDQKEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPD 74
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
DP K + TR+LGL+VCRGT+V+L+ P DG + I NPF+ D
Sbjct: 75 DPYKLAEDTRELGLVVCRGTSVVLICPMDGMESIPNPFISQD 116
>gi|156544990|ref|XP_001608041.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nasonia
vitripennis]
Length = 115
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 17 KEKKRKESILDLSKYLEKNIRVKFAGGREASGILKGYDPLLNLVLDNTTEYLRDPDDPYK 76
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 77 LNQDTRMLGLVVCRGTSVVLICPVDGMESIPNPFVQQEG 115
>gi|169648001|gb|ACA62002.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 1 KEKXRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 96
>gi|169647969|gb|ACA61986.1| CG13277 [Drosophila melanogaster]
gi|169647971|gb|ACA61987.1| CG13277 [Drosophila melanogaster]
gi|169647973|gb|ACA61988.1| CG13277 [Drosophila melanogaster]
gi|169647975|gb|ACA61989.1| CG13277 [Drosophila melanogaster]
gi|169647977|gb|ACA61990.1| CG13277 [Drosophila melanogaster]
gi|169647979|gb|ACA61991.1| CG13277 [Drosophila melanogaster]
gi|169647981|gb|ACA61992.1| CG13277 [Drosophila melanogaster]
gi|169647983|gb|ACA61993.1| CG13277 [Drosophila melanogaster]
gi|169647985|gb|ACA61994.1| CG13277 [Drosophila melanogaster]
gi|169647989|gb|ACA61996.1| CG13277 [Drosophila melanogaster]
gi|169647991|gb|ACA61997.1| CG13277 [Drosophila melanogaster]
gi|169647995|gb|ACA61999.1| CG13277 [Drosophila melanogaster]
gi|169647997|gb|ACA62000.1| CG13277 [Drosophila melanogaster]
gi|169647999|gb|ACA62001.1| CG13277 [Drosophila melanogaster]
gi|169648003|gb|ACA62003.1| CG13277 [Drosophila melanogaster]
gi|169648005|gb|ACA62004.1| CG13277 [Drosophila melanogaster]
gi|169648007|gb|ACA62005.1| CG13277 [Drosophila melanogaster]
gi|169648009|gb|ACA62006.1| CG13277 [Drosophila melanogaster]
gi|169648013|gb|ACA62008.1| CG13277 [Drosophila melanogaster]
gi|169648017|gb|ACA62010.1| CG13277 [Drosophila melanogaster]
gi|169648019|gb|ACA62011.1| CG13277 [Drosophila melanogaster]
gi|169648021|gb|ACA62012.1| CG13277 [Drosophila melanogaster]
gi|169648023|gb|ACA62013.1| CG13277 [Drosophila melanogaster]
gi|169648025|gb|ACA62014.1| CG13277 [Drosophila melanogaster]
gi|169648027|gb|ACA62015.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 96
>gi|270012864|gb|EFA09312.1| hypothetical protein TcasGA2_TC030695, partial [Tribolium
castaneum]
Length = 104
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 75/98 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LRD DDP K
Sbjct: 7 KEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPDDPYK 66
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
T+ TR LGL+VCRGT+V+L+ P DG + I NPF+ D
Sbjct: 67 LTEDTRALGLVVCRGTSVVLICPMDGMESIQNPFISQD 104
>gi|383847376|ref|XP_003699330.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Megachile
rotundata]
Length = 115
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 17 KERKRKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYK 76
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 77 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 115
>gi|307194533|gb|EFN76825.1| U6 snRNA-associated Sm-like protein LSm7 [Harpegnathos saltator]
Length = 107
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 9 KEKKRKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYK 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 69 LIQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 107
>gi|332024943|gb|EGI65130.1| U6 snRNA-associated Sm-like protein LSm7 [Acromyrmex echinatior]
Length = 123
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 25 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRDPDDPYK 84
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 85 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 123
>gi|291228609|ref|XP_002734270.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Saccoglossus kowalevskii]
Length = 116
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 74/92 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+KF+DK ++VK GGR+ +G LKGYD LLNLV+D EF+RD DDP K ++TRQ
Sbjct: 25 SILDLSKFIDKPIRVKFQGGREASGILKGYDPLLNLVIDGTTEFVRDPDDPYKLLEETRQ 84
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
LGL+VCRGT+V+L+ P DG + IANPF+Q +G
Sbjct: 85 LGLVVCRGTSVVLICPADGMEAIANPFIQQEG 116
>gi|307177329|gb|EFN66502.1| U6 snRNA-associated Sm-like protein LSm7 [Camponotus floridanus]
Length = 111
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 13 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRDPDDPYK 72
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 73 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 111
>gi|324523853|gb|ADY48312.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 77/91 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL++F+DK ++VK GGR+ +G LKGYD L+NLVLD AVE++RD++DP K T++
Sbjct: 11 KKESIVDLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVRDSEDPQKITEE 70
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 71 TRALGLIVARGTAITVVAPNDGIEQIANPFV 101
>gi|20129565|ref|NP_609807.1| LSm7, isoform A [Drosophila melanogaster]
gi|386769700|ref|NP_001246045.1| LSm7, isoform B [Drosophila melanogaster]
gi|194884417|ref|XP_001976253.1| GG20109 [Drosophila erecta]
gi|195344568|ref|XP_002038853.1| GM17159 [Drosophila sechellia]
gi|195484003|ref|XP_002090522.1| GE13166 [Drosophila yakuba]
gi|195579644|ref|XP_002079671.1| GD21898 [Drosophila simulans]
gi|7298334|gb|AAF53562.1| LSm7, isoform A [Drosophila melanogaster]
gi|21064825|gb|AAM29642.1| RH73529p [Drosophila melanogaster]
gi|190659440|gb|EDV56653.1| GG20109 [Drosophila erecta]
gi|194133983|gb|EDW55499.1| GM17159 [Drosophila sechellia]
gi|194176623|gb|EDW90234.1| GE13166 [Drosophila yakuba]
gi|194191680|gb|EDX05256.1| GD21898 [Drosophila simulans]
gi|383291517|gb|AFH03719.1| LSm7, isoform B [Drosophila melanogaster]
Length = 110
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 72
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 73 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 108
>gi|114050803|ref|NP_001040136.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
gi|87248171|gb|ABD36138.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
Length = 118
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLRD DDP K D
Sbjct: 24 RKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDD 83
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+ +G
Sbjct: 84 TRALGLVVCRGTSVVLICPMDGMEAIPNPFINQEG 118
>gi|405951657|gb|EKC19551.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
gi|405960030|gb|EKC25982.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
Length = 113
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 72/89 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
T+LDLAK++DK ++VK +GGR+ G LKGYD LLNLVLD+ E+LRD DDP K T+ TR
Sbjct: 23 TILDLAKYLDKTIRVKFSGGREAAGVLKGYDPLLNLVLDDTTEYLRDPDDPYKLTEDTRT 82
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + IANPF+Q
Sbjct: 83 LGLVVCRGTSVVLICPADGMEAIANPFVQ 111
>gi|324541578|gb|ADY49622.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 77/91 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL++F+DK ++VK GGR+ +G LKGYD L+NLVLD AVE++RD++DP K T++
Sbjct: 11 KKESIVDLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVRDSEDPQKITEE 70
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGLIV RGTA+ +V+P DG ++IANPF+
Sbjct: 71 TRPLGLIVARGTAITVVAPNDGIEQIANPFV 101
>gi|169647993|gb|ACA61998.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREAPGILKGYDALLNLVLDNTVEYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 96
>gi|195035361|ref|XP_001989146.1| GH10206 [Drosophila grimshawi]
gi|193905146|gb|EDW04013.1| GH10206 [Drosophila grimshawi]
Length = 113
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK-TTD 94
RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K T D
Sbjct: 17 RKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTED 76
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 77 STRSLGLVVCRGTALVLICPQDGVESIANPFI 108
>gi|169648015|gb|ACA62009.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++ K GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 1 KEKRRKESILDLSKYLEKQIRAKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 96
>gi|390349986|ref|XP_798585.3| PREDICTED: LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Strongylocentrotus purpuratus]
Length = 104
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+VTG LKG+D LLNLVLD EF+RD DDP K TD TR
Sbjct: 13 SILDLSKYIDKQIRVKFQGGREVTGVLKGFDPLLNLVLDGTTEFMRDPDDPFKLTDDTRN 72
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
LGL VCRGT+V+L+ P +G + IANPF+Q DG
Sbjct: 73 LGLAVCRGTSVVLICPAEGMEPIANPFVQQDG 104
>gi|194759991|ref|XP_001962225.1| GF14546 [Drosophila ananassae]
gi|190615922|gb|EDV31446.1| GF14546 [Drosophila ananassae]
Length = 110
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 72
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T D TR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 73 LTEDSTRSLGLVVCRGTALVLICPQDGVESIANPFI 108
>gi|167527011|ref|XP_001747838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773587|gb|EDQ87225.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 76/91 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +++L +F DK ++VK GGR+VTG LKG+DQLLN+VLD+A E+LRDA DP + TD+
Sbjct: 32 KRENIIELDRFTDKRIRVKFAGGREVTGILKGHDQLLNMVLDDAQEYLRDATDPTRLTDE 91
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGLIVCR ++++++SP DG +EIANPF+
Sbjct: 92 TRTLGLIVCRSSSIVVISPEDGMEEIANPFL 122
>gi|195114518|ref|XP_002001814.1| GI14941 [Drosophila mojavensis]
gi|195386594|ref|XP_002051989.1| GJ24083 [Drosophila virilis]
gi|193912389|gb|EDW11256.1| GI14941 [Drosophila mojavensis]
gi|194148446|gb|EDW64144.1| GJ24083 [Drosophila virilis]
Length = 110
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 72
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T D TR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 73 LTEDSTRSLGLVVCRGTALVLICPQDGVESIANPFI 108
>gi|195436750|ref|XP_002066318.1| GK18159 [Drosophila willistoni]
gi|194162403|gb|EDW77304.1| GK18159 [Drosophila willistoni]
Length = 110
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 72
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T D TR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 73 LTEDSTRSLGLVVCRGTALVLICPQDGVESIANPFI 108
>gi|328791249|ref|XP_003251537.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 2 [Apis
mellifera]
gi|350407868|ref|XP_003488222.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Bombus
impatiens]
gi|380018582|ref|XP_003693206.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2
[Apis florea]
Length = 113
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 15 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYK 74
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 75 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 113
>gi|240848877|ref|NP_001155739.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)-like
[Acyrthosiphon pisum]
gi|239790049|dbj|BAH71610.1| ACYPI008033 [Acyrthosiphon pisum]
Length = 107
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 78/94 (82%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL ++++K ++VK +GGR+V+G LKG+D L+NLVLD +E+LRD D+P+K T+
Sbjct: 14 KKESILDLTRYLEKAIRVKFSGGREVSGILKGFDPLVNLVLDNTLEYLRDPDEPMKLTED 73
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+VCRGT+++L+ P DG + IANPF+Q D
Sbjct: 74 TRTLGLVVCRGTSIVLICPVDGMEAIANPFVQQD 107
>gi|125985551|ref|XP_001356539.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|195147554|ref|XP_002014744.1| GL19334 [Drosophila persimilis]
gi|54644863|gb|EAL33603.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|194106697|gb|EDW28740.1| GL19334 [Drosophila persimilis]
Length = 110
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LRD+D+P K
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYK 72
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
T D TR LGL+VCRGTA++L+ P DG + IANPF
Sbjct: 73 LTEDSTRSLGLVVCRGTALVLICPADGVESIANPF 107
>gi|389611325|dbj|BAM19274.1| SM protein G, putative [Papilio polytes]
Length = 118
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLRD DDP K D
Sbjct: 24 RKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDD 83
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+ +G
Sbjct: 84 TRALGLVVCRGTSVVLICPMDGMEAIPNPFITQEG 118
>gi|328791247|ref|XP_001121212.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 1 [Apis
mellifera]
gi|380018580|ref|XP_003693205.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Apis florea]
Length = 109
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 11 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYK 70
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 71 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 109
>gi|340721932|ref|XP_003399367.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like [Bombus
terrestris]
Length = 113
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRD DDP K
Sbjct: 15 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYK 74
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL+VCRGT+V+L+ P DG + I NPF+Q +G
Sbjct: 75 LNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG 113
>gi|449682170|ref|XP_002165913.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Hydra
magnipapillata]
Length = 133
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 74/96 (77%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 94
+K ++LDL +F+DK ++VK +GGR+V G LKG+D LLN+VLD EF+RD DDP K ++
Sbjct: 38 AKKTSILDLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIRDPDDPYKLSE 97
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LG++VCRGTA++L+ P +G + IANPF+Q +
Sbjct: 98 DTRSLGIVVCRGTAIVLICPVEGMEAIANPFLQQEA 133
>gi|449685039|ref|XP_004210789.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
[Hydra magnipapillata]
gi|449685041|ref|XP_004210790.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2
[Hydra magnipapillata]
gi|449685043|ref|XP_004210791.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 3
[Hydra magnipapillata]
gi|449685045|ref|XP_004210792.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 4
[Hydra magnipapillata]
Length = 102
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 73/93 (78%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 94
+K ++LDL +F+DK ++VK +GGR+V G LKG+D LLN+VLD EF+RD DDP K ++
Sbjct: 7 AKKTSILDLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIRDPDDPYKLSE 66
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LG++VCRGTA++L+ P +G + IANPF+Q
Sbjct: 67 DTRSLGIVVCRGTAIVLICPVEGMEAIANPFLQ 99
>gi|237839969|ref|XP_002369282.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|211966946|gb|EEB02142.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|221484662|gb|EEE22956.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504848|gb|EEE30513.1| small nuclear ribonucleoprotein G, putative [Toxoplasma gondii VEG]
Length = 99
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 74/93 (79%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
S +V+DL KF+++ V+VK +GGR++TG LKG+D + NLVLDE EFLRD +DP K
Sbjct: 3 SKEARSVIDLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLRDPEDPYKLL 62
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
DQTR LGLIV RGTAV+L+SP DGT+EIANPF+
Sbjct: 63 DQTRTLGLIVARGTAVVLISPVDGTEEIANPFV 95
>gi|284413764|ref|NP_001165133.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
Length = 103
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKAIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
>gi|344306981|ref|XP_003422161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Loxodonta
africana]
Length = 132
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 33 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 92
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 93 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 128
>gi|357613355|gb|EHJ68454.1| U6 snRNA-associated Sm-like protein [Danaus plexippus]
Length = 116
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 70/91 (76%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLRD DDP K D
Sbjct: 23 RKESILDLSKYLEKCIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLVDD 82
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+VCRGT+V+L+ P DG + I NPF+
Sbjct: 83 TRALGLVVCRGTSVVLICPMDGMEAIPNPFI 113
>gi|169647987|gb|ACA61995.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD V +LRD+D+P K
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVGYLRDSDEPYK 60
Query: 92 -TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
T +QTR LGL+VCRGTA++L+ P DG + IANPF+
Sbjct: 61 LTEEQTRSLGLVVCRGTALVLICPQDGVESIANPFI 96
>gi|73987505|ref|XP_854995.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Canis lupus
familiaris]
gi|410949919|ref|XP_003981664.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Felis catus]
Length = 103
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 76/100 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q A
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA 103
>gi|355702951|gb|EHH29442.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
Length = 122
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 23 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 82
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 83 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 118
>gi|431922251|gb|ELK19342.1| U6 snRNA-associated Sm-like protein LSm7 [Pteropus alecto]
Length = 103
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|387016782|gb|AFJ50510.1| u6 snRNA-associated Sm-like protein LSm7-like [Crotalus adamanteus]
Length = 103
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTVEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|301781078|ref|XP_002925960.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Ailuropoda melanoleuca]
Length = 110
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++RD DD K
Sbjct: 11 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMRDPDDQYK 70
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 71 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 106
>gi|47225688|emb|CAG08031.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD +K
Sbjct: 4 KEKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQMK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|348549932|ref|XP_003460787.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Cavia
porcellus]
Length = 154
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 55 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 114
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 115 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 150
>gi|432116914|gb|ELK37501.1| U6 snRNA-associated Sm-like protein LSm7, partial [Myotis davidii]
Length = 101
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 2 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 61
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 62 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 97
>gi|432853545|ref|XP_004067760.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Oryzias
latipes]
Length = 103
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD LK
Sbjct: 4 KEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQLK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|410921512|ref|XP_003974227.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Takifugu
rubripes]
Length = 103
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD +K
Sbjct: 4 KEKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQMK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|7706423|ref|NP_057283.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|219804601|ref|NP_001137334.1| U6 snRNA-associated Sm-like protein LSm7 [Bos taurus]
gi|114674535|ref|XP_512258.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan
troglodytes]
gi|311248306|ref|XP_003123072.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Sus
scrofa]
gi|332255874|ref|XP_003277052.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nomascus
leucogenys]
gi|397496951|ref|XP_003819284.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan paniscus]
gi|402903635|ref|XP_003914668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Papio anubis]
gi|403273733|ref|XP_003928656.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Saimiri
boliviensis boliviensis]
gi|426229199|ref|XP_004008679.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Ovis aries]
gi|426386553|ref|XP_004059748.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Gorilla
gorilla gorilla]
gi|10720075|sp|Q9UK45.1|LSM7_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|5919155|gb|AAD56231.1|AF182293_1 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|12018382|gb|AAG45442.1|AC005258_2 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|17391362|gb|AAH18621.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|123996969|gb|ABM86086.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|123997451|gb|ABM86327.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|157928972|gb|ABW03771.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|296485626|tpg|DAA27741.1| TPA: LSM7 homolog, U6 small nuclear RNA associated [Bos taurus]
gi|351703671|gb|EHB06590.1| U6 snRNA-associated Sm-like protein LSm7 [Heterocephalus glaber]
gi|383419119|gb|AFH32773.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|384940076|gb|AFI33643.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|410212872|gb|JAA03655.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410248364|gb|JAA12149.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410299120|gb|JAA28160.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410333089|gb|JAA35491.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 103
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 76/100 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q A
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA 103
>gi|443684081|gb|ELT88113.1| hypothetical protein CAPTEDRAFT_124620, partial [Capitella teleta]
Length = 100
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 74/99 (74%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KET+LDL+K++DK V+VK +GGR+ G LKG+D LLNLVLD E LRD DDP K
Sbjct: 2 KEKKKKETILDLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTENLRDPDDPFK 61
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
T+ TR LGL+VCRG +V+L+ P +G + IANPF+Q D
Sbjct: 62 LTEDTRPLGLVVCRGNSVVLICPEEGMESIANPFVQQDA 100
>gi|297703033|ref|XP_002828459.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Pongo
abelii]
Length = 103
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|395831650|ref|XP_003788908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Otolemur
garnettii]
Length = 168
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 69 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 128
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 129 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 164
>gi|354480892|ref|XP_003502637.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Cricetulus griseus]
gi|344243439|gb|EGV99542.1| U6 snRNA-associated Sm-like protein LSm7 [Cricetulus griseus]
Length = 104
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 76/100 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 5 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 64
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q A
Sbjct: 65 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDA 104
>gi|196002890|ref|XP_002111312.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
gi|190585211|gb|EDV25279.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
Length = 102
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 75/92 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E+++DL K +DK V+VK GGR+ G LKGYD LLNLVLD AVE LRD +D + +++
Sbjct: 9 KRESIVDLQKHIDKKVRVKFQGGREAIGILKGYDPLLNLVLDNAVENLRDFEDLSRISNE 68
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TRQLGL+VCRGT+V+++SP DG +EIANPF+Q
Sbjct: 69 TRQLGLVVCRGTSVVVISPNDGIEEIANPFVQ 100
>gi|225717318|gb|ACO14505.1| U6 snRNA-associated Sm-like protein LSm7 [Esox lucius]
Length = 111
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 73/92 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+
Sbjct: 16 KKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTED 75
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 76 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 107
>gi|126323619|ref|XP_001372576.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Monodelphis domestica]
Length = 103
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|148231641|ref|NP_001086126.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|49522817|gb|AAH74231.1| MGC83430 protein [Xenopus laevis]
Length = 103
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
>gi|348504874|ref|XP_003439986.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Oreochromis niloticus]
Length = 103
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 74/92 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD LK T+
Sbjct: 8 KKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQLKLTED 67
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 68 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|157823717|ref|NP_001102202.1| U6 snRNA-associated Sm-like protein LSm7 [Rattus norvegicus]
gi|149034482|gb|EDL89219.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_d [Rattus norvegicus]
Length = 103
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
>gi|225709346|gb|ACO10519.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 112
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 73/91 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++L+LAK+++K ++VK GGR+ +GTLKGYD LLNLVLD E+LRD DDP K T+
Sbjct: 19 KKESILELAKYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDNVTEYLRDPDDPYKLTED 78
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+VCRGT ++L+ P +G + I+NPF+
Sbjct: 79 TRPLGLVVCRGTGIVLICPQEGMESISNPFI 109
>gi|242009022|ref|XP_002425292.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509057|gb|EEB12554.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 109
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKG+D LLNLVLD EFLRD DD K
Sbjct: 11 KEKKRKESILDLSKYLEKSIRVKFAGGREAAGILKGFDPLLNLVLDNTTEFLRDPDDSYK 70
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T TR LGL+VCRGT+V+L+ PTDG + I+NPF+Q
Sbjct: 71 LTVDTRMLGLVVCRGTSVVLICPTDGMESISNPFVQ 106
>gi|312375289|gb|EFR22689.1| hypothetical protein AND_14337 [Anopheles darlingi]
Length = 169
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD +EFLRD DD K
Sbjct: 72 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLRDPDD-YK 130
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
D TR LGL+VCRGT+V+L+ P DG + I NPF+ +G
Sbjct: 131 LADDTRHLGLVVCRGTSVVLICPQDGMESIQNPFIAQEG 169
>gi|225713984|gb|ACO12838.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus salmonis]
gi|290563008|gb|ADD38898.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus salmonis]
Length = 111
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 73/91 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++L+LA++++K ++VK GGR+ +GTLKGYD LLNLVLD E+LRD DDP K T+
Sbjct: 18 KKESILELARYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDNVTEYLRDPDDPYKLTED 77
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+VCRGT ++L+ P +G + I+NPF+
Sbjct: 78 TRPLGLVVCRGTGIVLICPQEGMESISNPFI 108
>gi|387915654|gb|AFK11436.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
gi|392880576|gb|AFM89120.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
Length = 103
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|198436837|ref|XP_002127828.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated
isoform 2 [Ciona intestinalis]
Length = 99
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 72/92 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL+K++D+ ++VK GGR+ +G LKG+D LLNLVLD E LRD DDP K +D
Sbjct: 6 KKESILDLSKYLDRPIRVKFHGGREASGVLKGFDPLLNLVLDSTTETLRDPDDPYKLSDD 65
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL VCRGT+V+L+ P DG +EI NPF+Q
Sbjct: 66 TRALGLTVCRGTSVVLICPQDGMEEIPNPFVQ 97
>gi|391342642|ref|XP_003745625.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Metaseiulus occidentalis]
Length = 116
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 74/96 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K ++E+++DL+K++DK ++VK GGR+VTG LKGYD LLNLV+D EFLRD DD LK
Sbjct: 21 KPQRKRESIVDLSKYLDKLIRVKFQGGREVTGVLKGYDPLLNLVMDNTTEFLRDPDDHLK 80
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TR LGL+VCRG +++V P D ++IANPF+Q
Sbjct: 81 LTEDTRSLGLVVCRGPTIIIVHPQDSMEQIANPFVQ 116
>gi|224010870|ref|XP_002294392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969887|gb|EED88226.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 131
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 75/93 (80%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
+ +KE++L+LAK VD V+VK GGR++ G L+GYD+L+NLVLD+ EF+RD +DP T
Sbjct: 29 NSKKESILELAKLVDSSVRVKCLGGRELRGALRGYDELVNLVLDDCEEFMRDPEDPETIT 88
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+QTR+LGL+V RGT V LVSP +GT+EIANPF+
Sbjct: 89 NQTRKLGLVVIRGTQVSLVSPEEGTEEIANPFL 121
>gi|13384714|ref|NP_079625.1| U6 snRNA-associated Sm-like protein LSm7 [Mus musculus]
gi|52783146|sp|Q9CQQ8.1|LSM7_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|12833484|dbj|BAB22540.1| unnamed protein product [Mus musculus]
gi|12841027|dbj|BAB25051.1| unnamed protein product [Mus musculus]
gi|12849195|dbj|BAB28245.1| unnamed protein product [Mus musculus]
gi|12850664|dbj|BAB28806.1| unnamed protein product [Mus musculus]
gi|20380289|gb|AAH27511.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|51980691|gb|AAH81444.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|148699536|gb|EDL31483.1| mCG12127, isoform CRA_d [Mus musculus]
gi|148699790|gb|EDL31737.1| mCG5973 [Mus musculus]
Length = 103
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
>gi|313223467|emb|CBY40440.1| unnamed protein product [Oikopleura dioica]
gi|313234485|emb|CBY10442.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 71/88 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++L+L K+++K ++VK GGR+ +G LKGYDQLLNLV+D E LRDADDP + + ++R
Sbjct: 17 SILELNKYLEKAIRVKFQGGREASGILKGYDQLLNLVIDSTTEHLRDADDPFRPSSESRN 76
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFM 126
LGL+VCRGT+V+L+SP DG +EI NPF+
Sbjct: 77 LGLVVCRGTSVVLISPQDGMEEIPNPFI 104
>gi|148699534|gb|EDL31481.1| mCG12127, isoform CRA_b [Mus musculus]
Length = 114
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 75/96 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 15 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYK 74
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 75 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 110
>gi|114158715|ref|NP_001041471.1| LSM7 homolog, U6 small nuclear RNA associated [Danio rerio]
gi|133778786|gb|AAI33958.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 103
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 73/92 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+
Sbjct: 8 KKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTED 67
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 68 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|66804897|ref|XP_636181.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74852197|sp|Q54HF6.1|LSM7_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm7
gi|60464543|gb|EAL62681.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 97
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 73/90 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL KF+ K + VK TGGR+V G LKGYDQL+N+ LD+ EF+RDA+DPL TTD+
Sbjct: 8 KKESILDLQKFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTQEFIRDAEDPLITTDE 67
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R LGL+VCRG++VM+V PT+G + I NP+
Sbjct: 68 KRFLGLVVCRGSSVMMVCPTEGCEPIDNPY 97
>gi|401404091|ref|XP_003881646.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
gi|325116059|emb|CBZ51613.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
Length = 99
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 73/93 (78%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
S +V+DL KF+++ V+VK +GGR++TG LKG+D + NLVLDE EFLRD +DP K
Sbjct: 3 SKEARSVIDLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLRDPEDPYKLL 62
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
DQTR LGLIV RGTAV+L+SP GT+EIANPF+
Sbjct: 63 DQTRTLGLIVARGTAVVLISPVAGTEEIANPFV 95
>gi|313213028|emb|CBY36907.1| unnamed protein product [Oikopleura dioica]
gi|313234529|emb|CBY10486.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 74/95 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K + +KE++L+L K++DK ++VK GGR+ +G LKG+DQLLNLV+D E LRD DDP +
Sbjct: 10 KQAKKKESILELNKYLDKAIRVKFQGGREASGILKGFDQLLNLVIDSTTEQLRDVDDPYR 69
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+ ++R LGL+VCRGT+V+L+SP DG + I NPF+
Sbjct: 70 PSTESRNLGLVVCRGTSVVLISPQDGMEAIPNPFI 104
>gi|118789320|ref|XP_317337.3| AGAP008122-PA [Anopheles gambiae str. PEST]
gi|116123162|gb|EAA12576.3| AGAP008122-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD +EFLRD DD K
Sbjct: 29 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLRDPDD-YK 87
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
D TR LGL+VCRGT+V+L+ P DG + I NPF+ +G
Sbjct: 88 LADDTRHLGLVVCRGTSVVLICPQDGMESIQNPFIAQEG 126
>gi|318054598|ref|NP_001187750.1| LSM7 homolog, U6 small nuclear RNA associated [Ictalurus punctatus]
gi|308323873|gb|ADO29072.1| u6 snRNA-associated sm-like protein lsm7 [Ictalurus punctatus]
Length = 103
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++ DL+K+++K ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESIFDLSKYINKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGTAV+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTAVVLICPQDGMEAIPNPFVQ 99
>gi|157134384|ref|XP_001663270.1| SM protein G, putative [Aedes aegypti]
gi|108870499|gb|EAT34724.1| AAEL013061-PA [Aedes aegypti]
Length = 127
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK +GGR+ G LKGYD LLNLVLD VEFLRD DD K
Sbjct: 30 KEKRRKESILDLSKYLEKTIRVKFSGGREAAGVLKGYDPLLNLVLDNTVEFLRDPDD-YK 88
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
++TR LGL+VCRGT+V+L+ P +G + I NPF+ +G
Sbjct: 89 LAEETRHLGLVVCRGTSVVLICPQEGMESIQNPFITQEG 127
>gi|328869356|gb|EGG17734.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 106
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL KF+ KG+ VK TGGR+V G LKGYD L+N+ LD+ E++RD DPL T++
Sbjct: 6 KKESILDLQKFLGKGISVKFTGGREVQGILKGYDPLVNITLDQCEEYIRDPQDPLNVTNE 65
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM-QPDGA 131
R LGL+VCRG++VM+V P +G +EI NP++ Q +GA
Sbjct: 66 KRYLGLVVCRGSSVMMVCPMEGCEEIDNPYLDQVEGA 102
>gi|225706932|gb|ACO09312.1| U6 snRNA-associated Sm-like protein LSm7 [Osmerus mordax]
Length = 103
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 72/92 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++ DL+K++DK ++ K GGR+ +G LKG+D LLNLVLD +E++RD DD K T+
Sbjct: 8 KKESIFDLSKYIDKPIRAKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQFKLTED 67
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 68 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|340368632|ref|XP_003382855.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Amphimedon queenslandica]
Length = 108
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
Query: 36 RKETVL--DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
R+ET+L +L K++DK ++VK GGR+ +G LKGYDQLLNLVLD A+E+L+D D K T
Sbjct: 11 RRETLLSAELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIEYLQDPKDQFKLT 70
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D+TR LGL+VCRGTAV+L+ P D + IANPF+Q
Sbjct: 71 DETRSLGLVVCRGTAVVLICPADTMEPIANPFLQ 104
>gi|258563080|ref|XP_002582285.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907792|gb|EEP82193.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLD+ E +RD + D
Sbjct: 48 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKEIMRDDE----GNDS 103
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 104 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQ 135
>gi|148675990|gb|EDL07937.1| mCG17287 [Mus musculus]
Length = 103
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 74/96 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GG + +G LKG+D LLNLVLD +E++RD DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGWETSGILKGFDPLLNLVLDGTMEYMRDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 99
>gi|170037644|ref|XP_001846666.1| SM protein G [Culex quinquefasciatus]
gi|167880950|gb|EDS44333.1| SM protein G [Culex quinquefasciatus]
Length = 130
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD VEFLRD DD K
Sbjct: 33 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTVEFLRDPDD-YK 91
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
+++R LGL+VCRGT+V+L+ P +G + I NPF+ +G
Sbjct: 92 LAEESRHLGLVVCRGTSVVLICPQEGMESIQNPFITQEG 130
>gi|221221360|gb|ACM09341.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705016|gb|ACO08354.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 107
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 15 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 74
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 75 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 103
>gi|119589795|gb|EAW69389.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 128
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 36 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ 95
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 96 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 124
>gi|213514586|ref|NP_001134195.1| LSM7 homolog, U6 small nuclear RNA associated [Salmo salar]
gi|209731384|gb|ACI66561.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209732196|gb|ACI66967.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209733656|gb|ACI67697.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209737242|gb|ACI69490.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705702|gb|ACO08697.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
gi|290563094|gb|ADD38941.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus salmonis]
gi|303667107|gb|ADM16255.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 78
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 79 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 107
>gi|224087215|ref|XP_002189612.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Taeniopygia
guttata]
Length = 115
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 23 SILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQFKLTEDTRQ 82
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 83 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 111
>gi|225711338|gb|ACO11515.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 111
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 78
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 79 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 107
>gi|303317868|ref|XP_003068936.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240108617|gb|EER26791.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320038992|gb|EFW20927.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 144
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLDE E +RD + +
Sbjct: 54 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDE----GNET 109
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 110 TRSLGLIVARGTLLVLISPADGSEEIANPFVQQE 143
>gi|145230750|ref|XP_001389639.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus niger CBS
513.88]
gi|134055758|emb|CAK44131.1| unnamed protein product [Aspergillus niger]
gi|350638639|gb|EHA26995.1| hypothetical protein ASPNIDRAFT_205537 [Aspergillus niger ATCC
1015]
Length = 136
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V+VK GGR+V GTLKGYDQL+NLVLD+ E +RD + +
Sbjct: 46 KKENILDLNKYMDKEVRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDE----GNEN 101
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF+QP+
Sbjct: 102 TRSLGLVVARGTIIVLISPADGSEEIANPFVQPE 135
>gi|255941628|ref|XP_002561583.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586206|emb|CAP93954.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 125
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK VQVK +GGR+VTGTLKGYDQL+NLVLDE E +RD + TT
Sbjct: 35 KKENILDLNKYMDKEVQVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDEEG--NTT-- 90
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR +GLIV RGT ++L+SP DG++EI NPF+Q +
Sbjct: 91 TRSMGLIVARGTLIVLISPADGSEEIPNPFLQAE 124
>gi|326934238|ref|XP_003213199.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like [Meleagris
gallopavo]
Length = 116
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 24 SILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ 83
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 84 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 112
>gi|119186309|ref|XP_001243761.1| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
gi|392870472|gb|EAS32278.2| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
Length = 144
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLDE E +RD + +
Sbjct: 54 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDE----GNET 109
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 110 TRSLGLIVARGTLLVLISPVDGSEEIANPFVQQE 143
>gi|221221528|gb|ACM09425.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 70/89 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 78
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + + NPF+Q
Sbjct: 79 LGLVVCRGTSVVLICPQDGMEAVPNPFIQ 107
>gi|221221276|gb|ACM09299.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 107
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 70/89 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 15 SIFDLSKYLDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 74
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 75 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 103
>gi|440912172|gb|ELR61764.1| U6 snRNA-associated Sm-like protein LSm7, partial [Bos grunniens
mutus]
Length = 113
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 21 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ 80
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 81 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 109
>gi|149034483|gb|EDL89220.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_e [Rattus norvegicus]
Length = 141
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 49 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ 108
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 109 LGLVVCRGTSVVLICPQDGMEAIPNPFVQ 137
>gi|17544592|ref|NP_502034.1| Protein LSM-7 [Caenorhabditis elegans]
gi|3881724|emb|CAA93428.1| Protein LSM-7 [Caenorhabditis elegans]
Length = 104
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 72/90 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LRD +P D+
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDE 68
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TRQLGLIV RGTA+ +VSP DG ++IANPF
Sbjct: 69 TRQLGLIVARGTAITVVSPADGLEQIANPF 98
>gi|452845630|gb|EME47563.1| hypothetical protein DOTSEDRAFT_69495 [Dothistroma septosporum
NZE10]
Length = 133
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+VTGTLKGYDQL+NLVLD E R DD T+
Sbjct: 40 KKENILDLAKYMDKEISVKFNGGREVTGTLKGYDQLMNLVLDNVKELTR--DDEGNTS-- 95
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPFMQ D
Sbjct: 96 TRNLGLLVARGTLLVLISPLDGSEEIANPFMQQD 129
>gi|213404126|ref|XP_002172835.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
gi|212000882|gb|EEB06542.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
Length = 112
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 76/92 (82%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+++ D+ +Q KLTGGRQ++G LKGYDQL+NLVLD+ E LRD +D + D+
Sbjct: 21 RKESILDLSRYQDQRIQAKLTGGRQISGVLKGYDQLMNLVLDDVEENLRDPED-GRVLDE 79
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR+LGL+V RGT ++L++P DG++EI NPF+Q
Sbjct: 80 TRKLGLVVVRGTTLVLLAPMDGSEEIPNPFVQ 111
>gi|148699535|gb|EDL31482.1| mCG12127, isoform CRA_c [Mus musculus]
Length = 139
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 47 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQ 106
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 107 LGLVVCRGTSVVLICPQDGMEAIPNPFVQ 135
>gi|330806057|ref|XP_003290991.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
gi|325078869|gb|EGC32498.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
Length = 98
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 72/92 (78%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
+ +KE++LDL +F+ K + VK TGGR+V G LKGYDQL+N+ LD+ EF+RD DPL T
Sbjct: 7 ASKKESILDLQRFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTKEFIRDPIDPLIVT 66
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
D+TR LGL+VCRG++VM+V PT+G + I NP+
Sbjct: 67 DETRFLGLVVCRGSSVMMVCPTEGFETIDNPY 98
>gi|281207655|gb|EFA81835.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 110
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 69/91 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL KF+ KG+ VK TGGR+V G LKGYD L+N+ LD EF+RD DPL T +
Sbjct: 8 KKESILDLQKFLGKGLTVKFTGGREVQGILKGYDPLVNITLDNCEEFIRDPQDPLSLTGE 67
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R LGL+VCRG++VM+V P +G +EI NP++
Sbjct: 68 KRYLGLVVCRGSSVMMVCPMEGCEEIDNPYL 98
>gi|413919650|gb|AFW59582.1| hypothetical protein ZEAMMB73_572847 [Zea mays]
Length = 71
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 61 VTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDE 120
+TGTLKGYDQLLNLVLDEAVE R+ DDPLK + +TRQLGLIVCRGTAVMLVSPTDGTDE
Sbjct: 2 LTGTLKGYDQLLNLVLDEAVENEREQDDPLKLSGKTRQLGLIVCRGTAVMLVSPTDGTDE 61
Query: 121 IANPFMQPDGA 131
IANPF+ DGA
Sbjct: 62 IANPFLA-DGA 71
>gi|225705776|gb|ACO08734.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 111
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNL LD +E+LRD DD K T+ TRQ
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLALDSTIEYLRDPDDQFKLTEDTRQ 78
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 79 LGLVVCRGTSVVLICPQDGMEAIPNPFIQ 107
>gi|440804414|gb|ELR25291.1| Hypothetical protein ACA1_290670, partial [Acanthamoeba castellanii
str. Neff]
Length = 96
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 71/90 (78%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
+TVLDL +++ + V VK +GGR+VTG LKGYD L+NLVLDE EFLRD DP K + +TR
Sbjct: 2 KTVLDLDRYLGQRVTVKFSGGREVTGLLKGYDTLVNLVLDETKEFLRDPTDPYKPSVRTR 61
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL VC+G++VML+ P DGT+EI NPF++
Sbjct: 62 GLGLTVCKGSSVMLICPVDGTEEIPNPFLK 91
>gi|322786976|gb|EFZ13200.1| hypothetical protein SINV_03814 [Solenopsis invicta]
Length = 116
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 12/108 (11%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR------- 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 7 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRGVRYLNN 66
Query: 85 -----DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D DDP K TR LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 67 FFNYIDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQ 114
>gi|380491285|emb|CCF35428.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 144
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +RD + +
Sbjct: 53 KKENILDLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEE----GNET 108
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF QPD
Sbjct: 109 TRSLGLVVARGTLLVLVSPVDGSEPIANPFAQPD 142
>gi|310794009|gb|EFQ29470.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 143
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +RD + +
Sbjct: 52 KKENILDLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEE----GNET 107
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF QPD
Sbjct: 108 TRSLGLVVARGTLLVLVSPVDGSEPIANPFAQPD 141
>gi|452986071|gb|EME85827.1| hypothetical protein MYCFIDRAFT_181789 [Pseudocercospora fijiensis
CIRAD86]
Length = 125
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+VTGTLKGYDQL+NLVLD E RD D
Sbjct: 32 KKENILDLAKYMDKDITVKFNGGREVTGTLKGYDQLMNLVLDNVKETTRDED----GNTS 87
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF+Q D
Sbjct: 88 TRNLGLLVARGTLLVLISPVDGSEEIANPFVQAD 121
>gi|148699533|gb|EDL31480.1| mCG12127, isoform CRA_a [Mus musculus]
Length = 106
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 71/89 (79%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 14 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQ 73
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 74 LGLVVCRGTSVVLICPQDGMEAIPNPFVQ 102
>gi|358385010|gb|EHK22607.1| hypothetical protein TRIVIDRAFT_60544 [Trichoderma virens Gv29-8]
Length = 132
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLDE E LRD + +
Sbjct: 41 KKENILDLAKYMDKEITVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDEE----GNES 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
+R LGL+V RGT ++L+SP DG++EIANPF QP+
Sbjct: 97 SRPLGLVVVRGTLLVLISPADGSEEIANPFAQPE 130
>gi|295664210|ref|XP_002792657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278771|gb|EEH34337.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 180
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD +D
Sbjct: 89 KKENILDLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDED----NQT 144
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF+Q +
Sbjct: 145 TRPLGLVVARGTLLVLISPVDGSEEIANPFLQAE 178
>gi|225677618|gb|EEH15902.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 179
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD +D
Sbjct: 88 KKENILDLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDED----NQT 143
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF+Q +
Sbjct: 144 TRPLGLVVARGTLLVLISPVDGSEEIANPFLQAE 177
>gi|320166272|gb|EFW43171.1| small nuclear riboprotein [Capsaspora owczarzaki ATCC 30864]
Length = 110
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQ--VTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
E++++LAK +DK V+VK GGR+ + G LKGYD LLNLVLDE EFLRD DP + D+
Sbjct: 13 ESIVNLAKLLDKTVRVKFRGGREGKLIGLLKGYDPLLNLVLDETQEFLRDPADPERILDE 72
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TR LGL VCRGT V+L+ P DG ++I NPF+Q DG
Sbjct: 73 TRALGLTVCRGTTVILICPNDGMEQIENPFLQEDG 107
>gi|121701131|ref|XP_001268830.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
gi|119396973|gb|EAW07404.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
Length = 140
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 72/92 (78%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +RD + +
Sbjct: 50 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDE----GNET 105
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 106 TRSLGLIVARGTLIVLISPADGSEEIANPFVQ 137
>gi|238492871|ref|XP_002377672.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
gi|317156803|ref|XP_003190769.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus oryzae RIB40]
gi|220696166|gb|EED52508.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
Length = 133
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK V+VK GGR+V GTLKG+DQL+NLVLD+ E +RD + +
Sbjct: 43 KKENILDLSKYMDKEVRVKFNGGREVVGTLKGFDQLMNLVLDDVKESMRDDE----GNEN 98
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 99 TRSLGLIVARGTIIVLISPADGSEEIANPFVQAE 132
>gi|430812263|emb|CCJ30291.1| unnamed protein product [Pneumocystis jirovecii]
Length = 121
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK+ D+ V+VK GGR++ G LKGYD L+NLVLDE +E LRD D + TDQ
Sbjct: 28 KKEAILDLAKYKDQKVRVKFAGGREIVGILKGYDLLMNLVLDEVIENLRDEDGNI--TDQ 85
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
RQLGL+V RGT ++L SP DG++EI NPF++
Sbjct: 86 KRQLGLVVIRGTTLILFSPIDGSEEIKNPFLE 117
>gi|119495066|ref|XP_001264327.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
gi|119412489|gb|EAW22430.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
Length = 138
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 72/92 (78%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +RD + +
Sbjct: 48 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDE----GNET 103
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 104 TRSLGLIVARGTLIVLISPADGSEEIANPFVQ 135
>gi|308491262|ref|XP_003107822.1| CRE-LSM-7 protein [Caenorhabditis remanei]
gi|308249769|gb|EFO93721.1| CRE-LSM-7 protein [Caenorhabditis remanei]
Length = 103
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 72/94 (76%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LRD +P D+
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDE 68
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGTA+ +VSP DG ++IANPF D
Sbjct: 69 TRPLGLIVARGTAITVVSPADGLEQIANPFAAQD 102
>gi|425770497|gb|EKV08967.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum Pd1]
gi|425771863|gb|EKV10295.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum PHI26]
Length = 125
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK VQVK GGR+V GTLKGYDQL+NLVLD+ E +RD + TT
Sbjct: 35 KKENILDLSKYMDKEVQVKFNGGREVIGTLKGYDQLMNLVLDDVKETMRDEEG--NTT-- 90
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR +GLIV RGT ++L+SP DG++EI NPF+Q +
Sbjct: 91 TRSMGLIVARGTLIVLISPADGSEEIPNPFLQAE 124
>gi|32401287|gb|AAP80816.1| U6 snRNA-associated Sm-like protein LSm7 [Griffithsia japonica]
Length = 110
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 70/96 (72%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K ++ +LDL+K+ DK V V+L GGRQV G LKG+D LLNLVLDE VE LRD DD +
Sbjct: 11 KKGASQKVILDLSKYSDKDVIVRLAGGRQVRGVLKGWDPLLNLVLDEVVEQLRDVDDSYR 70
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+ + R+LGL+V RGT+VM VSP DG ++I NPF Q
Sbjct: 71 LSGKERKLGLVVVRGTSVMTVSPVDGVEQIENPFGQ 106
>gi|323448125|gb|EGB04028.1| hypothetical protein AURANDRAFT_33181 [Aureococcus anophagefferens]
Length = 103
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 71/96 (73%), Gaps = 6/96 (6%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA------DDPLK 91
++++DL K +DK V+VK GGR+V G LKG+DQL+N+VLD VE + A DDP +
Sbjct: 4 KSIIDLEKCIDKEVRVKFQGGREVRGVLKGFDQLVNIVLDNCVESMHGASARAHPDDPYR 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TD+TR+LGL+VCRG V LVSP DG +EIANPF+Q
Sbjct: 64 LTDKTRKLGLVVCRGLQVSLVSPVDGMEEIANPFIQ 99
>gi|268536210|ref|XP_002633240.1| C. briggsae CBR-LSM-7 protein [Caenorhabditis briggsae]
Length = 103
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 71/90 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LRD +P D+
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVIGDE 68
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGLIV RGTA+ +VSP DG ++IANPF
Sbjct: 69 TRPLGLIVARGTAITVVSPADGLEQIANPF 98
>gi|296808563|ref|XP_002844620.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
gi|238844103|gb|EEQ33765.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
Length = 155
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR++TG LKGYDQL+NLVLD+ E +RD +D +
Sbjct: 64 KKENILDLTKYMDKEVNVKFNGGREITGVLKGYDQLMNLVLDDVKETMRDDNDNIT---- 119
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 120 TRSLGLIVARGTLLVLLSPADGSEEIANPFVQQE 153
>gi|315043418|ref|XP_003171085.1| RH73529p [Arthroderma gypseum CBS 118893]
gi|311344874|gb|EFR04077.1| RH73529p [Arthroderma gypseum CBS 118893]
Length = 151
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +RD +D +
Sbjct: 60 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNV----T 115
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 116 TRSLGLIVARGTLLVLLSPADGSEEIANPFVQ 147
>gi|221219684|gb|ACM08503.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 126
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 67/87 (77%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LRD DD K T+ TRQ
Sbjct: 15 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQ 74
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPF 125
LGL+VCRGT+V+L+ P DG + I PF
Sbjct: 75 LGLVVCRGTSVVLICPQDGMEAIPCPF 101
>gi|327294916|ref|XP_003232153.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326465325|gb|EGD90778.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 147
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +RD +D +
Sbjct: 56 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVT---- 111
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 112 TRSLGLIVARGTLLVLLSPADGSEEIANPFVQ 143
>gi|326473412|gb|EGD97421.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS 112818]
gi|326481892|gb|EGE05902.1| small nuclear ribonucleoprotein LSM7 [Trichophyton equinum CBS
127.97]
Length = 154
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +RD +D +
Sbjct: 63 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVT---- 118
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 119 TRSLGLIVARGTLLVLLSPADGSEEIANPFVQQE 152
>gi|256075162|ref|XP_002573889.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 664
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 69/94 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL K++DK ++VK +GGR+ G LKG D L N+V+D EFLRD DDP + T+
Sbjct: 571 KKESIIDLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLRDPDDPHRLTED 630
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR+L L+VCRG +V LV P DG + I NPF+Q +
Sbjct: 631 TRELALVVCRGPSVELVCPADGMESIPNPFVQQE 664
>gi|353228992|emb|CCD75163.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 105
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE+++DL K++DK ++VK +GGR+ G LKG D L N+V+D EFLRD DDP + T+
Sbjct: 12 KKESIIDLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLRDPDDPHRLTED 71
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR+L L+VCRG +V LV P DG + I NPF+Q
Sbjct: 72 TRELALVVCRGPSVELVCPADGMESIPNPFVQ 103
>gi|451845213|gb|EMD58526.1| hypothetical protein COCSADRAFT_194481 [Cochliobolus sativus
ND90Pr]
Length = 136
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L D D ++
Sbjct: 46 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEDGNIR---- 101
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
R+LGLIV RGT ++++SP DG++EIANPF+Q +
Sbjct: 102 YRKLGLIVARGTLLVVISPVDGSEEIANPFLQEE 135
>gi|453087944|gb|EMF15985.1| U6 snRNA-associated Sm-like protein LSm7 [Mycosphaerella populorum
SO2202]
Length = 134
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K+++KG+ VK GGR+VTGTLKG+DQL+NLVLD E RD +
Sbjct: 41 KKENILDLSKYLEKGITVKFNGGREVTGTLKGFDQLMNLVLDNVKETTRDEE----GNTS 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF+Q D
Sbjct: 97 TRNLGLLVARGTLLVLISPVDGSEEIANPFVQAD 130
>gi|242773724|ref|XP_002478297.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
gi|218721916|gb|EED21334.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
Length = 144
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR+V+G LKGYDQL+NLVLD+ E +RD +
Sbjct: 54 KKENILDLTKYMDKEVNVKFNGGREVSGILKGYDQLMNLVLDDVKEKMRDE----SGNET 109
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DGT+EIANPF+Q +
Sbjct: 110 TRSLGLIVARGTLLVLISPADGTEEIANPFVQQE 143
>gi|340519781|gb|EGR50019.1| predicted protein [Trichoderma reesei QM6a]
Length = 100
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLD+ E LRD + +
Sbjct: 11 KKENILDLAKYMDKEIIVKFNGGREVRGTLKGYDALMNLVLDQVQETLRDDE----GNES 66
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
+R LGL+V RGT ++L+SP DG++EIANPF QP+
Sbjct: 67 SRSLGLVVVRGTLLVLISPADGSEEIANPFAQPE 100
>gi|57530588|ref|NP_001006337.1| U6 snRNA-associated Sm-like protein LSm7 [Gallus gallus]
gi|53130424|emb|CAG31541.1| hypothetical protein RCJMB04_7l22 [Gallus gallus]
Length = 116
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 69/89 (77%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++LDL+K++ K ++VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQ
Sbjct: 24 SILDLSKYIGKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQ 83
Query: 99 LGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+VCRGT+V+L+ P DG + I NP +Q
Sbjct: 84 LGLVVCRGTSVVLICPQDGMEAIPNPLIQ 112
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+V GTLKG+D L+NLVLD+ E +RD + +
Sbjct: 164 KKENILDLTKYMDKQITVKFNGGREVMGTLKGFDALMNLVLDDVQETVRDEEG----NES 219
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EIANPF QPD
Sbjct: 220 TRPLGLVVVRGTLLVLISPVDGSEEIANPFAQPD 253
>gi|46130650|ref|XP_389105.1| hypothetical protein FG08929.1 [Gibberella zeae PH-1]
gi|408391559|gb|EKJ70933.1| hypothetical protein FPSE_08901 [Fusarium pseudograminearum CS3096]
Length = 131
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+V GTLKGYD L+NLVLD+ E +RD + +
Sbjct: 40 KKENILDLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDE----GNES 95
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++EIANPF+QP+
Sbjct: 96 TRSLGLVVVRGTLLVLVSPVDGSEEIANPFVQPE 129
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+VDK + VK GGR++ GTLKGYDQL+NLVLD+ E +RD + +
Sbjct: 47 KKENILDLGKYVDKQITVKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDE----GNET 102
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQP 128
TR LGL+V RGT ++L+SP DG++EI NPF QP
Sbjct: 103 TRPLGLVVARGTLLVLISPLDGSEEIENPFQQP 135
>gi|389646277|ref|XP_003720770.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|351638162|gb|EHA46027.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|440483313|gb|ELQ63726.1| hypothetical protein OOW_P131scaffold00952g14 [Magnaporthe oryzae
P131]
Length = 146
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK VQVK GGR+V GTLKGYD L+NLVLDE E +RD + +
Sbjct: 54 KKENILDLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEE----GNES 109
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+R LGL+V RGT ++ +SPTDG++ IANPF+Q
Sbjct: 110 SRPLGLVVVRGTLLVAISPTDGSESIANPFLQ 141
>gi|406861450|gb|EKD14504.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 133
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK TGGR+VTGTLKGYD L+NLVLD+ E LR DD T+
Sbjct: 43 KKENILDLGKYMDKKITVKFTGGREVTGTLKGYDALMNLVLDDVDEVLR--DDEGNTS-- 98
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
+R LGL+V RGT ++LVSP DG++EIANPF+Q +
Sbjct: 99 SRSLGLVVARGTLLVLVSPVDGSEEIANPFVQAE 132
>gi|346977239|gb|EGY20691.1| hypothetical protein VDAG_10320 [Verticillium dahliae VdLs.17]
Length = 140
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLD+ E +RD + +
Sbjct: 49 KKENILDLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDDE----GKEN 104
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF QP+
Sbjct: 105 TRSLGLVVARGTLLVLVSPVDGSEPIANPFAQPE 138
>gi|302419873|ref|XP_003007767.1| RH73529p [Verticillium albo-atrum VaMs.102]
gi|261353418|gb|EEY15846.1| RH73529p [Verticillium albo-atrum VaMs.102]
Length = 141
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLD+ E +RD + +
Sbjct: 50 KKENILDLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDDE----GKEN 105
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF QP+
Sbjct: 106 TRSLGLVVARGTLLVLVSPVDGSEPIANPFAQPE 139
>gi|225561488|gb|EEH09768.1| predicted protein [Ajellomyces capsulatus G186AR]
Length = 174
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 83 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRD-DEGNQT--- 138
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 139 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQ 170
>gi|327351953|gb|EGE80810.1| U6 snRNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 165
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 74 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRD-DEGNQT--- 129
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 130 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQAE 163
>gi|239612791|gb|EEQ89778.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 164
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 73 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRD-DEGNQT--- 128
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 129 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQAE 162
>gi|261194282|ref|XP_002623546.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239588560|gb|EEQ71203.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 160
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 69 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRD-DEGNQT--- 124
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 125 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQAE 158
>gi|294901650|ref|XP_002777457.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239885093|gb|EER09273.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 125
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 72/96 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
+ S + +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LRD +DP K
Sbjct: 26 RRSSIRPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYK 85
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+ +TR LGL+V RGT+V+LV PT G EI NPF +
Sbjct: 86 PSGKTRNLGLLVARGTSVVLVCPTAGVAEIDNPFTE 121
>gi|154282731|ref|XP_001542161.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410341|gb|EDN05729.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 171
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 80 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRD-DEGNQT--- 135
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 136 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQ 167
>gi|240274594|gb|EER38110.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325090925|gb|EGC44235.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 169
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +RD D+ +T
Sbjct: 78 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRD-DEGNQT--- 133
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 134 TRSLGLIVARGTLLVLISPVDGSEEIANPFLQ 165
>gi|452822117|gb|EME29139.1| U6 snRNA-associated Sm-like protein LSm7 [Galdieria sulphuraria]
Length = 108
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
SGR + D++K++D V V+L GGRQV+G L+G+D L+NLVLDEAVE LRD +DP KTT
Sbjct: 13 SGRSGAI-DVSKYLDVRVYVRLLGGRQVSGILRGWDPLVNLVLDEAVEQLRDPEDPYKTT 71
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
D+ R+LGL+V RGT+++ V P +G +EI NPF
Sbjct: 72 DKERKLGLVVIRGTSLVSVYPVEGAEEIVNPF 103
>gi|67516971|ref|XP_658371.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|40746253|gb|EAA65409.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|259488955|tpe|CBF88826.1| TPA: small nuclear ribonucleoprotein (LSM7), putative
(AFU_orthologue; AFUA_1G14290) [Aspergillus nidulans
FGSC A4]
Length = 136
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +RD + +
Sbjct: 46 KKENILDLTKYMDKEVRVKFNGGREVSGILKGYDQLMNLVLDDVKESMRDDE----GNET 101
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG+++IANPF+Q +
Sbjct: 102 TRALGLIVARGTLIVLISPADGSEQIANPFVQAE 135
>gi|115492179|ref|XP_001210717.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197577|gb|EAU39277.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 132
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V+VK GGR+V G LKGYDQL+NLVLD+ E +RD + +
Sbjct: 42 KKENILDLTKYMDKEVRVKFNGGREVLGLLKGYDQLMNLVLDDVKETMRDDE----GNET 97
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 98 TRSLGLIVARGTLIVLISPADGSEEIANPFVQ 129
>gi|452002106|gb|EMD94564.1| hypothetical protein COCHEDRAFT_1221931 [Cochliobolus
heterostrophus C5]
Length = 135
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L D ++
Sbjct: 45 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEHGNIR---- 100
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
R+LGLIV RGT ++++SP DG++EIANPF+Q +
Sbjct: 101 YRKLGLIVARGTLLVVISPVDGSEEIANPFLQEE 134
>gi|402084831|gb|EJT79849.1| hypothetical protein GGTG_04932 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 143
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLA+++DK VQVK GGR+VTGTLKGYD L+NLVLD+ E +RD D +
Sbjct: 51 KKENILDLARYMDKEVQVKFNGGREVTGTLKGYDALMNLVLDDVKETMRDDD----GNET 106
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
+R LGL+V RGT ++ +SPTDG++ IANPF+Q D
Sbjct: 107 SRPLGLVVIRGTLLVALSPTDGSEPIANPFVQHD 140
>gi|302921652|ref|XP_003053324.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
gi|256734264|gb|EEU47611.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
Length = 133
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLD+ E +RD + +
Sbjct: 42 KKENILDLAKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDE----GNES 97
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL+V RGT ++LVSP DG++EIANPF+Q
Sbjct: 98 TRSLGLVVVRGTLLVLVSPVDGSEEIANPFVQ 129
>gi|212531689|ref|XP_002146001.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
gi|210071365|gb|EEA25454.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
Length = 150
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR+V+G LKGYDQL+NLVLD+ E +RD +
Sbjct: 60 KKENILDLTKYMDKEVIVKFNGGREVSGILKGYDQLMNLVLDDVKEKMRDES----GKEA 115
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGLIV RGT ++L+SP DG++EIANPF+Q +
Sbjct: 116 TRSLGLIVARGTLLVLISPADGSEEIANPFVQAE 149
>gi|440634700|gb|ELR04619.1| hypothetical protein GMDG_06901 [Geomyces destructans 20631-21]
Length = 137
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK GGR+VTG LKGYD L+NLVLD+ E LRD D +
Sbjct: 47 KKENILDLSKYMDKRITVKFNGGREVTGALKGYDALMNLVLDDVQEVLRDDD----GNET 102
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF+Q +
Sbjct: 103 TRSLGLVVARGTLLVLVSPVDGSESIANPFVQEE 136
>gi|296411623|ref|XP_002835529.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629315|emb|CAZ79686.1| unnamed protein product [Tuber melanosporum]
Length = 136
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
Query: 26 GFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD 85
G+ K + +E +LDLAKF+DK + VK GGR+V G LKGYDQL+NLVLD+ E LRD
Sbjct: 36 GYNKDQQERKPREAILDLAKFMDKAITVKFNGGREVVGILKGYDQLMNLVLDDVKENLRD 95
Query: 86 ADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
D + TR+LGL+V RG + L+SP DG+++I NPFM +G
Sbjct: 96 ED----GNETTRELGLVVARGPMLTLISPMDGSEQIENPFMTQEG 136
>gi|342886030|gb|EGU85973.1| hypothetical protein FOXB_03482 [Fusarium oxysporum Fo5176]
Length = 133
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+V GTLKGYD L+NLVLD+ E +RD + D
Sbjct: 42 KKENILDLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDE----GNDS 97
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL+V RGT ++LVSP DG++EIANPF+Q
Sbjct: 98 TRSLGLVVVRGTLLVLVSPVDGSEEIANPFVQ 129
>gi|189208804|ref|XP_001940735.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976828|gb|EDU43454.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 72/94 (76%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L D + ++
Sbjct: 41 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIR---- 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
R+LGLIV RGT ++++SP DG++EI NPFMQ +
Sbjct: 97 YRKLGLIVARGTLLVVISPVDGSEEIPNPFMQEE 130
>gi|343427570|emb|CBQ71097.1| related to snRNP protein [Sporisorium reilianum SRZ2]
Length = 143
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++D+ ++VK GGR+V GTLKG+DQL+NLV+DE E LR DD TD+
Sbjct: 52 KKEAILDLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESLR--DDEGNVTDK 109
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGTA+ +++P DG + I NPF Q +
Sbjct: 110 TRNLGLVVLRGTALTVINPADGFESIENPFAQAE 143
>gi|345563731|gb|EGX46716.1| hypothetical protein AOL_s00097g464 [Arthrobotrys oligospora ATCC
24927]
Length = 168
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 70/90 (77%), Gaps = 4/90 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK +GGR+VTG LKGYDQL+NLVLD+ E +RD + +Q
Sbjct: 75 KKEAILDLAKYMDKRIIVKFSGGREVTGALKGYDQLMNLVLDDVQEVMRDDE----GNEQ 130
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR+LGL+V RG ++L+SP DGT++I NPF
Sbjct: 131 TRELGLVVARGPLLVLISPVDGTEQIENPF 160
>gi|71012485|ref|XP_758502.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
gi|46098160|gb|EAK83393.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
Length = 175
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 71/94 (75%), Gaps = 2/94 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++D+ ++VK GGR+V GTLKG+DQL+NLV+DE E +RD + TD+
Sbjct: 84 KKEAILDLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESVRDEEG--NVTDK 141
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGTA+ +++P DG + I NPF Q +
Sbjct: 142 TRNLGLVVLRGTALTVINPADGFESIENPFAQAE 175
>gi|322703623|gb|EFY95229.1| U6 snRNA-associated protein LSm7, putative [Metarhizium anisopliae
ARSEF 23]
Length = 134
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+VTGTLKGYD L+NLVLDE E +RD + +
Sbjct: 44 KKENILDLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEE----GNES 99
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL+V RGT +++++P DG++EIANPF
Sbjct: 100 TRPLGLVVARGTLLVVIAPVDGSEEIANPF 129
>gi|330917406|ref|XP_003297804.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
gi|311329333|gb|EFQ94110.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
Length = 131
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 71/94 (75%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L D ++
Sbjct: 41 KKENILDLSKYMDKQITVKFSGGREVVGTLKGYDQLMNLVLDEVKEALTDDQGNIR---- 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
R+LGLIV RGT ++++SP DG++EI NPFMQ +
Sbjct: 97 YRKLGLIVARGTLLVVISPVDGSEEIPNPFMQEE 130
>gi|294886585|ref|XP_002771771.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239875533|gb|EER03587.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 71/94 (75%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
S + +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LRD +DP K +
Sbjct: 27 SSIRPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYKLS 86
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+TR LGL+V RGT+V+LV P+ G EI NPF +
Sbjct: 87 GKTRNLGLLVARGTSVVLVCPSTGITEIDNPFTE 120
>gi|403169358|ref|XP_003328805.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167924|gb|EFP84386.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 125
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT-D 94
++E +LDLAKF DK V+VK GGR++TG LKGYDQLLNLV+DE E LR+ + T+
Sbjct: 31 KREAILDLAKFADKRVRVKFMGGREITGILKGYDQLLNLVMDEVEEILREPEGATVTSPP 90
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+TR LGL V RGT++++++P DG +EIANPF+
Sbjct: 91 KTRSLGLAVIRGTSLVVINPVDGYEEIANPFIN 123
>gi|397643091|gb|EJK75649.1| hypothetical protein THAOC_02624 [Thalassiosira oceanica]
Length = 184
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 74/100 (74%), Gaps = 11/100 (11%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-----------A 86
+++L+LAK +D+ V+VK GGR++ G L+GYD+L+NLVLD+ EF+R +
Sbjct: 71 DSILELAKLIDQNVRVKCLGGRELRGALRGYDELVNLVLDDCDEFIRGWLGVETRISGYS 130
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+DP K T++TR+LGL+V RGT V LVSP DGT+EIANPF+
Sbjct: 131 NDPEKITNKTRKLGLVVIRGTQVSLVSPEDGTEEIANPFL 170
>gi|322694161|gb|EFY85998.1| U6 snRNA-associated protein LSm7, putative [Metarhizium acridum
CQMa 102]
Length = 135
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+VTGTLKGYD L+NLVLDE E +RD + +
Sbjct: 45 KKENILDLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEG----NES 100
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL+V RGT +++++P DG++EIANPF
Sbjct: 101 TRPLGLVVARGTLLVVITPVDGSEEIANPF 130
>gi|358370068|dbj|GAA86680.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 153
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 74/109 (67%), Gaps = 17/109 (15%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT-- 93
+KE +LDL K++DK V+VK GGR+V G LKGYDQL+NLVLD+ E +R PL+ +
Sbjct: 46 KKENILDLNKYMDKEVRVKFNGGREVVGLLKGYDQLMNLVLDDVKESMRGK--PLQQSPH 103
Query: 94 -------------DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
+ TR LGL+V RGT ++L+SP DG++EIANPF+QP+
Sbjct: 104 YYSLLTLPDDEGNENTRSLGLVVARGTIIVLISPADGSEEIANPFVQPE 152
>gi|294941880|ref|XP_002783286.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239895701|gb|EER15082.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 139
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 70/91 (76%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+ +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LRD +DP K + +T
Sbjct: 45 RPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYKLSGKT 104
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RGT+V+LV P+ G EI NPF +
Sbjct: 105 RNLGLLVARGTSVVLVCPSTGITEIDNPFTE 135
>gi|428672291|gb|EKX73205.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 104
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 70/89 (78%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
++V++L K ++K V VK +GGR+V GTLKG+D + NLVLD+ EFL+D DDP K T +TR
Sbjct: 12 KSVINLNKHLNKQVYVKFSGGREVQGTLKGHDAMSNLVLDDTKEFLKDPDDPEKLTGETR 71
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+LGL+V RGT+V ++ P DGT++I NPF+
Sbjct: 72 ELGLLVARGTSVTVIYPIDGTEKIENPFV 100
>gi|396489534|ref|XP_003843128.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
gi|312219706|emb|CBX99649.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
Length = 202
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L D + ++
Sbjct: 111 KKENILDLNKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIR---- 166
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R+LGLIV RGT ++++SP DG++EIANPF+Q
Sbjct: 167 YRKLGLIVARGTLLVVISPVDGSEEIANPFIQ 198
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL+NLVLD+ E LR+ +D K T
Sbjct: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED-GKLTGA 79
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R+LGL+V RGT ++L++P DG++EI NPF+Q
Sbjct: 80 IRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQ 111
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL+NLVLD+ E LR+ +D K T
Sbjct: 25 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPED-GKLTGA 83
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R+LGL+V RGT ++L++P DG++EI NPF+Q
Sbjct: 84 IRKLGLVVVRGTTLVLIAPMDGSEEIPNPFVQ 115
>gi|358393465|gb|EHK42866.1| hypothetical protein TRIATDRAFT_300894 [Trichoderma atroviride IMI
206040]
Length = 139
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLDE E LRD + +
Sbjct: 48 KKENILDLAKYMDKAIIVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDD----QGNET 103
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL+V RGT ++L+SP DG++EI NPF
Sbjct: 104 TRSLGLVVVRGTLLVLISPADGSEEIPNPF 133
>gi|326429750|gb|EGD75320.1| hypothetical protein PTSG_06970 [Salpingoeca sp. ATCC 50818]
Length = 107
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 67/93 (72%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
++ +LDL K+VDK ++VK +GGR+V G L+GYD L NLVL + +EFLRD D K TD+T
Sbjct: 11 RKHILDLEKYVDKKLRVKFSGGREVVGVLQGYDPLSNLVLSDTIEFLRDPSDLSKITDKT 70
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
R LGL VCR ++++++P +G E NPF PD
Sbjct: 71 RTLGLCVCRHVSIVMIAPEEGMTETENPFAVPD 103
>gi|449296389|gb|EMC92409.1| hypothetical protein BAUCODRAFT_287708 [Baudoinia compniacensis
UAMH 10762]
Length = 133
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+VTG LKGYDQL+NLVLD E RD + L
Sbjct: 41 KKENILDLTKYMDKDITVKFNGGREVTGLLKGYDQLMNLVLDNVKEITRDDEGNL----S 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++L+SP DG++EI NPF++ D
Sbjct: 97 TRSLGLLVARGTLLVLISPVDGSEEIENPFVRGD 130
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL NLVLD+ E LR+ +D K T
Sbjct: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLXNLVLDDVEEQLRNPED-GKLTGA 79
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R+LGL+V RGT ++L++P DG++EI NPF+Q
Sbjct: 80 IRKLGLVVVRGTTLVLIAPXDGSEEIPNPFVQ 111
>gi|422294798|gb|EKU22098.1| U6 snRNA-associated Sm-like protein LSm7 [Nannochloropsis gaditana
CCMP526]
Length = 77
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 57 GGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
GGR+VTG L+G+DQL+NLVLDE+ E LRD DP + TD+TR+LGL++CRGT V L+SP +
Sbjct: 2 GGREVTGILRGFDQLINLVLDESKETLRDPLDPYRLTDETRELGLVICRGTQVSLISPVE 61
Query: 117 GTDEIANPFMQ 127
GT+EIANPF+Q
Sbjct: 62 GTEEIANPFIQ 72
>gi|171676173|ref|XP_001903040.1| hypothetical protein [Podospora anserina S mat+]
gi|170936152|emb|CAP60812.1| unnamed protein product [Podospora anserina S mat+]
Length = 153
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 69/92 (75%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +RD + +
Sbjct: 60 KKENILDLKKYMDKRITVKFNGGREVTGTLKGYDALMNLVLDEVQEAVRDDE----GNET 115
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL+V RGT ++++SP DG++ IANPF+Q
Sbjct: 116 TRSLGLVVVRGTLLVVISPVDGSEVIANPFLQ 147
>gi|219111023|ref|XP_002177263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411798|gb|EEC51726.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 93
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 69/92 (75%)
Query: 40 VLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQL 99
+L+L+K VD V+VK GGR++ G L+GYD L+NLVLDE+ EFLRD ++ + T ++R+L
Sbjct: 1 MLELSKLVDCTVRVKCIGGREIKGILRGYDDLVNLVLDESEEFLRDHENQDRVTKRSRKL 60
Query: 100 GLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
GL V RGT V L+SP DG +EIANPF+ + A
Sbjct: 61 GLCVVRGTQVSLISPEDGVEEIANPFVAHEDA 92
>gi|238882730|gb|EEQ46368.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 123
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 70/94 (74%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ D+ ++VK GGR+V G LKG+DQL+NLVL+ E LRD +D TD+
Sbjct: 29 KREAILDLNKYKDQKIRVKFIGGREVVGILKGFDQLMNLVLENVTETLRDPEDDETLTDK 88
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V R T+++ +SP DG++ I NPF+QP+
Sbjct: 89 TRDLGLVVVRCTSLLTISPVDGSEIIDNPFIQPE 122
>gi|367010644|ref|XP_003679823.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
gi|359747481|emb|CCE90612.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
Length = 117
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP-LKTTD 94
++E +LDLAK+ D V+VKL GGR VTG LKGYDQL+NLVLDE +E++RD +DP + D
Sbjct: 25 KREAILDLAKYKDSKVRVKLMGGRLVTGILKGYDQLMNLVLDETLEYMRDPEDPSVILKD 84
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEI 121
+TR+LGLIV RGT ++ +SP DG++ I
Sbjct: 85 KTRELGLIVIRGTVLLSLSPCDGSEVI 111
>gi|388580059|gb|EIM20377.1| U6 snRNA-associated Sm-like protein LSm7 [Wallemia sebi CBS 633.66]
Length = 98
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 69/92 (75%), Gaps = 8/92 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL++FVD+ +++K GGR+ TG LKGYDQL+NLV+D+ VE L+D
Sbjct: 14 KKEAILDLSRFVDQSLRLKFQGGREATGILKGYDQLMNLVMDDVVEILQDG--------S 65
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+R LGL+V RG A+ +++P+DG++EIANPF Q
Sbjct: 66 SRTLGLVVLRGPAITVINPSDGSEEIANPFTQ 97
>gi|392563452|gb|EIW56631.1| U6 snRNA-associated Sm-like protein LSm7 [Trametes versicolor
FP-101664 SS1]
Length = 94
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+ D
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGILKGYDQLLNLVLDEVQENLQTPDG----EST 60
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+V RG + L+SP DG +EIANPF+
Sbjct: 61 TRNLGLVVLRGPTITLLSPVDGFEEIANPFL 91
>gi|328771114|gb|EGF81154.1| hypothetical protein BATDEDRAFT_7306, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 104
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 66/90 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K+ +K + V+ GGRQV G LKGYD L NLVLD+A EF+RD+ DP T +
Sbjct: 11 KKENILDLTKYSNKKIIVQFQGGRQVAGILKGYDPLSNLVLDDAEEFIRDSSDPSVLTGE 70
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR++GL+V R ++L+SP DGT+E +PF
Sbjct: 71 TRKIGLVVTRAPPMVLISPFDGTEETEDPF 100
>gi|116193791|ref|XP_001222708.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
gi|88182526|gb|EAQ89994.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
Length = 139
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLDE E LRD +
Sbjct: 44 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLRDDE---- 99
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+ TR LGL+V RGT ++++SP DG++ IANPF+Q
Sbjct: 100 GNEMTRPLGLVVVRGTLLVVLSPVDGSEVIANPFLQ 135
>gi|293355277|ref|XP_001074288.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
gi|392334395|ref|XP_003753162.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
Length = 108
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
E++LDL K++DK ++VK GG + +G KG+D LLNLVLD +E+ RD DD K T+ R
Sbjct: 15 ESILDLPKYIDKTIRVKFQGGWEASGISKGFDSLLNLVLDGTIEYRRDPDDQHKLTEDAR 74
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
QLGLIVC GT+V+L+ P D + + NPF+Q
Sbjct: 75 QLGLIVCPGTSVVLICPQDAMEALPNPFVQ 104
>gi|388854666|emb|CCF51823.1| related to snRNP protein [Ustilago hordei]
Length = 142
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%), Gaps = 2/90 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++D+ ++VK GGR+V G LKG+DQL+NLV+DE E LRD + TD+
Sbjct: 54 KKEAILDLTKYIDQKIRVKFAGGREVFGILKGFDQLMNLVMDEVTESLRDEEG--NVTDK 111
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL+V RGTA+ +++P DG + I NPF
Sbjct: 112 TRSLGLVVLRGTALTVINPADGFESIENPF 141
>gi|358058374|dbj|GAA95893.1| hypothetical protein E5Q_02551 [Mixia osmundae IAM 14324]
Length = 197
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD--PLKTT 93
+KE +L+L+K+ D+ ++VK GGR+VTG LKG DQL+N+VLD+ E +RD D PL
Sbjct: 102 KKEAILELSKYRDQRIRVKFLGGREVTGVLKGSDQLMNMVLDDVQELVRDPDTLAPLDPA 161
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
Q R LGL V RGTA+++++PTDG +EIANPF+Q
Sbjct: 162 -QYRSLGLTVIRGTAIVVINPTDGFEEIANPFVQ 194
>gi|429847940|gb|ELA23485.1| u6 snrna-associated protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 136
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 6/94 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL+K++DK + VK GG +TGTLKGYD L+NLVLDE E +RD + +
Sbjct: 47 KKENILDLSKYMDKQITVKFNGG--LTGTLKGYDALMNLVLDEVQEVMRDEE----GNET 100
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR LGL+V RGT ++LVSP DG++ IANPF QP+
Sbjct: 101 TRPLGLVVARGTLLVLVSPVDGSESIANPFAQPE 134
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis subvermispora
B]
Length = 93
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 69/91 (75%), Gaps = 5/91 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+ + LK
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVEEQLQ-TEGELK---- 59
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+V RG V L+SP DG +EIANPF+
Sbjct: 60 TRSLGLVVLRGPTVTLLSPVDGWEEIANPFV 90
>gi|156087671|ref|XP_001611242.1| LSM domain containing protein [Babesia bovis]
gi|154798496|gb|EDO07674.1| LSM domain containing protein [Babesia bovis]
Length = 103
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 68/89 (76%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
++V+ L +++K V VK +GGR+V G L+G+D + NLVLDE EFLRD DD + TD+TR
Sbjct: 12 KSVIKLDAYLNKKVYVKFSGGREVQGILRGHDVMSNLVLDETEEFLRDPDDLDRVTDKTR 71
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
QLGL+V RGT+V ++ P +G ++IANPF+
Sbjct: 72 QLGLLVARGTSVTVIHPVEGAEKIANPFL 100
>gi|255711522|ref|XP_002552044.1| KLTH0B05896p [Lachancea thermotolerans]
gi|238933422|emb|CAR21606.1| KLTH0B05896p [Lachancea thermotolerans CBS 6340]
Length = 111
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA-DDPLKTTD 94
++E +++L+K+ D ++VKL GGR V G LKGYDQL+NLVLDE VE LRD DD +
Sbjct: 15 KREAIVNLSKYADNKIRVKLAGGRLVVGVLKGYDQLMNLVLDETVEHLRDPEDDTVILEG 74
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
QTR+LGL+V RGT ++ +SP DG++ I+NP
Sbjct: 75 QTRELGLVVIRGTMLLTLSPMDGSEIISNPH 105
>gi|241955785|ref|XP_002420613.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
gi|223643955|emb|CAX41695.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
Length = 122
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 69/94 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ D+ ++VK GGR++ G LKG+DQL+NLVL+ E LRD +D TD+
Sbjct: 28 KREAILDLNKYKDQKIRVKFIGGREIVGILKGFDQLMNLVLENVTETLRDPEDDEILTDK 87
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TR GL+V R T+++ +SP DG++ I NPF+QP+
Sbjct: 88 TRDFGLVVVRCTSLLTISPVDGSEIIDNPFIQPE 121
>gi|154288569|ref|XP_001545066.1| hypothetical protein BC1G_16433 [Botryotinia fuckeliana B05.10]
gi|347835616|emb|CCD50188.1| hypothetical protein [Botryotinia fuckeliana]
Length = 140
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR V GTLKGYD L+NLVLD+ E L D + T+
Sbjct: 50 KKENILDLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDE----GTEA 105
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RGT ++ +SP DG++EIANPF+Q
Sbjct: 106 WRSLGLVVARGTLLIGISPVDGSEEIANPFVQ 137
>gi|389738918|gb|EIM80113.1| U6 snRNA-associated Sm-like protein LSm7, partial [Stereum hirsutum
FP-91666 SS1]
Length = 99
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 6/90 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E +++ T
Sbjct: 12 KREAILDLSKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQEEVQEP------TPH 65
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL V RG + L+SP DG +EIANPF
Sbjct: 66 TRSLGLTVLRGPTITLLSPVDGLEEIANPF 95
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 5/95 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+V++ ++VK TGGR+VTG LKG+DQLLNLVLD+ E L +PL +
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGFDQLLNLVLDDVEEQLH--TEPLPS--- 59
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDG 130
TRQLGL+V RG + L+SP DG +EIANPF+ D
Sbjct: 60 TRQLGLVVLRGPTLTLLSPVDGFEEIANPFVAQDA 94
>gi|170097019|ref|XP_001879729.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645132|gb|EDR09380.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 99
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E P
Sbjct: 13 KREAILDLSKYVNEKIRVKFTGGREVTGILKGYDQLLNLVLDEVEEEASGNPKP------ 66
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
RQLGL+V RG + ++SP DG++EIANPF+
Sbjct: 67 -RQLGLVVLRGPTITILSPVDGSEEIANPFL 96
>gi|340975579|gb|EGS22694.1| hypothetical protein CTHT_0011670 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 148
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLD+ E LRD +
Sbjct: 54 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDDVEELLRDDE---- 109
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+ TR LGL+V RGT ++ VSP DG++ IANPF+Q
Sbjct: 110 GNEMTRPLGLVVVRGTLLVFVSPVDGSEVIANPFVQ 145
>gi|336463585|gb|EGO51825.1| hypothetical protein NEUTE1DRAFT_53111 [Neurospora tetrasperma FGSC
2508]
Length = 144
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++D+ + VK GGR+VTGTLKGYD L+NLVLD+ E +RD + +
Sbjct: 52 KKENILDLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEE----GNET 107
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL+V RGT ++++SP DG++ IANPF Q
Sbjct: 108 TRPLGLVVARGTLLVVISPVDGSEVIANPFAQ 139
>gi|302499670|ref|XP_003011830.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
gi|291175384|gb|EFE31190.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
Length = 223
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 72/111 (64%), Gaps = 19/111 (17%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---------DA 86
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +R +
Sbjct: 109 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRGKTVHLDFKEV 168
Query: 87 D------DPLKTTDQ----TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D D L D TR LGLIV RGT ++L+SP DG++EIANPF+Q
Sbjct: 169 DGLNMFADWLGVDDNDNVTTRSLGLIVARGTLLVLLSPADGSEEIANPFVQ 219
>gi|221059904|ref|XP_002260597.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain H]
gi|193810671|emb|CAQ42569.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain H]
Length = 107
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 65/86 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++RD +D L T++TR +GL
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSLVITEKTRSIGL 78
Query: 102 IVCRGTAVMLVSPTDGTDEIANPFMQ 127
+V RGT++ L++P DGT EIANPF+
Sbjct: 79 VVARGTSIALITPVDGTQEIANPFIS 104
>gi|403416516|emb|CCM03216.1| predicted protein [Fibroporia radiculosa]
Length = 110
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 12/103 (11%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP------ 89
++E +LDL+K+ ++ ++VK TGGR+VTG LKG+DQLLNLVLDE E ++ +D
Sbjct: 5 KREAILDLSKYANERIRVKFTGGREVTGILKGFDQLLNLVLDEVEEQFQNGEDSKFTIGL 64
Query: 90 LKTTD------QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+ +T+ QTR LGL+V RG + L+SP DG++EIANPF+
Sbjct: 65 ISSTNFAEAQLQTRSLGLVVLRGPTITLLSPVDGSEEIANPFL 107
>gi|124805657|ref|XP_001350501.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
gi|23496624|gb|AAN36181.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
Length = 108
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 65/85 (76%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+V GTL G+D + NLVLD+ E++RD +D TD+TR +GL
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGTLIGHDAIFNLVLDKTEEYIRDPNDSFVVTDKTRSIGL 79
Query: 102 IVCRGTAVMLVSPTDGTDEIANPFM 126
IV RGT+V L++P +GT EI+NPF+
Sbjct: 80 IVARGTSVALITPVEGTQEISNPFI 104
>gi|367021900|ref|XP_003660235.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
gi|347007502|gb|AEO54990.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
Length = 141
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 7/96 (7%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLDE E LR
Sbjct: 49 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLR------- 101
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+ TR LGL+V RGT ++++SP DG++ IANPF+Q
Sbjct: 102 GNEMTRPLGLVVVRGTLLVVISPVDGSEVIANPFLQ 137
>gi|443895126|dbj|GAC72472.1| hypothetical protein PANT_7d00115 [Pseudozyma antarctica T-34]
Length = 117
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
KE +LDL K++D ++VK GGR+V G LKG+DQL+NLV+D+ E LRDAD ++T
Sbjct: 27 KEAILDLTKYIDTKIRVKFAGGREVFGVLKGFDQLMNLVMDDVHEALRDADG--NVGEKT 84
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RGTA+ +++P DG + I NPF Q
Sbjct: 85 RNLGLVVLRGTALTVINPADGFESIENPFAQ 115
>gi|126137239|ref|XP_001385143.1| hypothetical protein PICST_46810 [Scheffersomyces stipitis CBS
6054]
gi|126092365|gb|ABN67114.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 109
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 30 SLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
S K G +++ +LDL K+ D+ ++VK GGR VTG L+G+DQL+NLVLD+ E LRD D
Sbjct: 10 STKQEGPKRDAILDLNKYKDQVIRVKFIGGRHVTGVLRGFDQLMNLVLDDVTETLRDDDS 69
Query: 89 PLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
L T +TRQLG +V R T+++ +SP DGT+EI NPF+
Sbjct: 70 IL--TKETRQLGFVVVRCTSLLTISPADGTEEIDNPFV 105
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
Length = 118
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
R+E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E D L
Sbjct: 31 RREAILDLSKYVNERIRVKFTGGREVTGLLKGYDQLLNLVLDEVTE------DVLLPEPH 84
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R LGL V RG + LVSP DG+++IANPF
Sbjct: 85 QRSLGLAVLRGPTITLVSPVDGSEQIANPF 114
>gi|209879165|ref|XP_002141023.1| U6 snRNA-associated Sm-like protein LSm7 [Cryptosporidium muris
RN66]
gi|209556629|gb|EEA06674.1| U6 snRNA-associated Sm-like protein LSm7, putative [Cryptosporidium
muris RN66]
Length = 95
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 69/90 (76%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
+++LDL+KF++K ++VK+ GGR VTG L+GYD + N+VLD+ EFL D +D TT + R
Sbjct: 4 KSILDLSKFINKEIRVKICGGRDVTGILRGYDGVTNIVLDDTKEFLLDPEDLTNTTSEQR 63
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+V RGT++++++P DG++ I NPF+
Sbjct: 64 DLGLLVVRGTSILMIAPLDGSEYIENPFVN 93
>gi|168040999|ref|XP_001772980.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675713|gb|EDQ62205.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 105
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 8/99 (8%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQ--VTGTLKGYDQLLNLVLDEAVEFLRDA---DD 88
SGRKETVLDLAKFVD+GV VKL+ VTGTLKGYDQLLNLVLDEA E R
Sbjct: 2 SGRKETVLDLAKFVDRGVSVKLSDVNHLAVTGTLKGYDQLLNLVLDEASESSRGEIFLCY 61
Query: 89 PLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
PL + ++VCRGTA +L++ TDGT+EI NP +Q
Sbjct: 62 PLTIFSLSI---ILVCRGTAAVLIASTDGTEEITNPLLQ 97
>gi|367041894|ref|XP_003651327.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
gi|346998589|gb|AEO64991.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
Length = 155
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE +LDL K++D+ + VK GGR+ TG LKGYD L+NLVLD+ E LR DD
Sbjct: 60 KERPKKENILDLKKYMDQRITVKFNGGREATGVLKGYDALMNLVLDDVEEVLR--DDEGN 117
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
TT TR LGL+V RGT +++VSP +G++ IANPF+Q D
Sbjct: 118 TT--TRPLGLVVVRGTLLVVVSPVNGSEVIANPFLQAD 153
>gi|302308616|ref|NP_985600.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|299790714|gb|AAS53424.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|374108830|gb|AEY97736.1| FAFR053Cp [Ashbya gossypii FDAG1]
Length = 115
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 64/89 (71%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+ D V+VKL GGR VTG LKGYDQL+NLVLDE VE+LRD +D T +
Sbjct: 24 KREAILDLAKYQDTQVRVKLMGGRLVTGVLKGYDQLMNLVLDETVEYLRDEEDASVVTQR 83
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANP 124
TR LGLIV RGT ++ +SP G + P
Sbjct: 84 TRPLGLIVIRGTILLSLSPAAGGAVVPGP 112
>gi|156031032|ref|XP_001584841.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980]
gi|154700515|gb|EDO00254.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 138
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++DK V VK GGR V GTLKGYD L+NLVLD+ E L D + +
Sbjct: 48 KKENILDLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDE----GNEA 103
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RGT ++ +SP DG++EIANPF+Q
Sbjct: 104 WRALGLVVARGTLLIGISPVDGSEEIANPFVQ 135
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea okayama7#130]
Length = 107
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V++ ++VK TGGR+V G LKGYDQLLNLVLDE E + A +P K
Sbjct: 19 KREAILDLSKYVNEKIRVKFTGGREVIGVLKGYDQLLNLVLDEVEEEV-SASNPYK---- 73
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RG + L+SP DG +EIANPF+
Sbjct: 74 KRSLGLVVLRGPTITLLSPVDGFEEIANPFVS 105
>gi|156101744|ref|XP_001616565.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium vivax Sal-1]
gi|148805439|gb|EDL46838.1| U6 snRNA-associated Sm-like protein LSm7, putative [Plasmodium
vivax]
Length = 107
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 64/85 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++RD +D T++TR +GL
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSFVITEKTRSIGL 78
Query: 102 IVCRGTAVMLVSPTDGTDEIANPFM 126
+V RGT++ L++P DGT EIANPF+
Sbjct: 79 VVARGTSIALITPVDGTQEIANPFI 103
>gi|380800039|gb|AFE71895.1| U6 snRNA-associated Sm-like protein LSm7, partial [Macaca mulatta]
Length = 80
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVML 111
+VK GGR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQLGL+VCRGT+V+L
Sbjct: 1 RVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVL 60
Query: 112 VSPTDGTDEIANPFMQ 127
+ P DG + I NPF+Q
Sbjct: 61 ICPQDGMEAIPNPFIQ 76
>gi|344301861|gb|EGW32166.1| hypothetical protein SPAPADRAFT_61256 [Spathaspora passalidarum
NRRL Y-27907]
Length = 129
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 67/93 (72%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ + ++VK GGRQ+TG LKG+DQL+NLVL+ E LRD +D T +
Sbjct: 34 KREAILDLNKYKHQEIKVKFVGGRQITGVLKGFDQLMNLVLENVKEQLRDPEDDTVLTKE 93
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQP 128
TR LGL+V R T+++ +SP +G + I NPF+QP
Sbjct: 94 TRDLGLVVVRCTSLLTISPVNGFEIIENPFVQP 126
>gi|71026359|ref|XP_762856.1| U6 snRNA-associated protein [Theileria parva strain Muguga]
gi|68349808|gb|EAN30573.1| U6 snRNA-associated protein, putative [Theileria parva]
Length = 104
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 69/92 (75%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
++V++L K ++K V VK +GGR+V G L+G+D + NLVLD+ VE+L+D+ D K T + R
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKR 71
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFMQPD 129
LGL+V RGT+V +V P +GT++I NPF++ +
Sbjct: 72 NLGLLVARGTSVTVVYPVEGTEKIDNPFLESN 103
>gi|328858404|gb|EGG07517.1| hypothetical protein MELLADRAFT_35470 [Melampsora larici-populina
98AG31]
Length = 108
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V++ V VK GGRQ+TG LKGYD LLNLV+DE E L+ P +TT +
Sbjct: 20 KREAILDLSKYVNQRVIVKFMGGRQITGILKGYDGLLNLVMDEVEESLK----PEETT-K 74
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL V RGT+++++SP +G +EIANPF+
Sbjct: 75 TRSLGLAVIRGTSLVVISPVEGFEEIANPFI 105
>gi|164661255|ref|XP_001731750.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
gi|159105651|gb|EDP44536.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
Length = 130
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L+LAK+VDK ++VK GGR+V GTLKGYDQL+ LV+D+ E D + TT +
Sbjct: 38 KKEAILNLAKYVDKEIRVKFMGGREVVGTLKGYDQLMTLVMDDVEEIKHDPSNG-NTTGE 96
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL V RGT + L+SP DG D I NPF+Q
Sbjct: 97 RRTLGLAVLRGTNLTLISPVDGFDIIENPFVQ 128
>gi|393228545|gb|EJD36188.1| U6 snRNA-associated Sm-like protein LSm7 [Auricularia delicata
TFB-10046 SS5]
Length = 116
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%), Gaps = 6/90 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+ ++ ++VK TGGR+VTG LKGYDQLLNLVLD+ E +++ + +
Sbjct: 29 KREAILDLSKYQNERIRVKFTGGREVTGILKGYDQLLNLVLDDVEEVIQEPE------PR 82
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR+LGL V RG V L+SP DG +EIANPF
Sbjct: 83 TRKLGLAVLRGPTVTLLSPVDGAEEIANPF 112
>gi|291001357|ref|XP_002683245.1| predicted protein [Naegleria gruberi]
gi|284096874|gb|EFC50501.1| predicted protein [Naegleria gruberi]
Length = 103
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 68/95 (71%), Gaps = 6/95 (6%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQ 95
+E +LDL +++ K V VK GGR+V GTL+G+D ++NLVL++ EF+RD D + TD+
Sbjct: 4 RENILDLNQYISKQVLVKFIGGREVYGTLRGFDNMINLVLEDCYEFIRDLQDHHNRQTDE 63
Query: 96 T-----RQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R+LG+++CRGT++M + P DGT+EI NPF
Sbjct: 64 NNKQYVRKLGIVICRGTSLMHLCPVDGTEEIENPF 98
>gi|407919352|gb|EKG12602.1| hypothetical protein MPH_10268 [Macrophomina phaseolina MS6]
Length = 81
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DKG+ VK GGR+VTGTLKGYDQL+NLVLD+ E +RD + + TR LGLIV RG
Sbjct: 1 MDKGISVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDD----EGNETTRSLGLIVARG 56
Query: 107 TAVMLVSPTDGTDEIANPF 125
T ++L+SP DG++EIANPF
Sbjct: 57 TLLVLISPLDGSEEIANPF 75
>gi|68062334|ref|XP_673172.1| u6 snRNA-associated Sm-like protein [Plasmodium berghei strain
ANKA]
gi|56490825|emb|CAH96266.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium berghei]
Length = 108
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 64/85 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ EF+RD +D T+++R +GL
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSYVITEKSRNIGL 79
Query: 102 IVCRGTAVMLVSPTDGTDEIANPFM 126
IV RGT+V L++P +GT EI+NPF+
Sbjct: 80 IVARGTSVALITPVNGTQEISNPFI 104
>gi|363754719|ref|XP_003647575.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891212|gb|AET40758.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 119
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD- 94
++E +LDLAK+ D V+VK+ GGR V G LKGYD+L+NLVLDE VE+LRD DD +
Sbjct: 27 KREAILDLAKYKDTKVRVKVMGGRLVIGILKGYDELMNLVLDETVEYLRDEDDSSVILEG 86
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANP 124
+TR LGLIV RGT ++ +SP G D IA P
Sbjct: 87 KTRNLGLIVIRGTILLSLSPVAGGDLIAGP 116
>gi|336363390|gb|EGN91783.1| hypothetical protein SERLA73DRAFT_148178 [Serpula lacrymans var.
lacrymans S7.3]
Length = 92
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+ ++ ++VK TGGR+V G LKGYDQLLNLVLDE E + + +
Sbjct: 5 KREAILDLSKYANERIRVKFTGGREVVGILKGYDQLLNLVLDEVEEQINEPE------PH 58
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
+R LGL V RG + LVSP DG +EIANPF+
Sbjct: 59 SRSLGLAVLRGPTITLVSPVDGLEEIANPFV 89
>gi|444315628|ref|XP_004178471.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
gi|387511511|emb|CCH58952.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
Length = 142
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP-LKTTD 94
R+E ++DL+K+ D V+VKL GGR V G LKGYDQL+NLVLDE +E++RD DP + D
Sbjct: 50 RREAIVDLSKYKDSKVRVKLMGGRLVIGILKGYDQLMNLVLDETIEYIRDPTDPYVIQKD 109
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+TR LGL V RG ++ +SP DG++ I +MQ
Sbjct: 110 KTRNLGLAVIRGNVLLTLSPVDGSEII---YMQ 139
>gi|390478353|ref|XP_002761603.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Callithrix
jacchus]
Length = 103
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 67/96 (69%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ G L+G+ L ++ + +V D DD K
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREAGGLLRGFTMLARMLPESSVCSSPDPDDQYK 63
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 64 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 99
>gi|254585355|ref|XP_002498245.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
gi|238941139|emb|CAR29312.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
Length = 116
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTD 94
++E +L+LAK+ D V+VKL GGR V G LKGYDQL+NLVLDE +E++RD +D D
Sbjct: 24 KREAILNLAKYKDTKVRVKLMGGRLVVGVLKGYDQLMNLVLDETIEYMRDPEDSSFILKD 83
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIA 122
+TR+LGLIV RGT ++ +SP DG++ ++
Sbjct: 84 KTRELGLIVIRGTVLLSLSPQDGSEIVS 111
>gi|403352746|gb|EJY75890.1| U6 snRNA-associated Sm-like protein LSm7 [Oxytricha trifallax]
Length = 136
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 8 NAVSFFIVCRSARVSFNLG-FLKSLKMSGR----------KETVLDLAKFVDKGVQVKLT 56
N VS C + F G ++ +L+ R +E+ +DLA VDK +++K
Sbjct: 3 NRVSIHNSCNQSYWYFMFGIYIYNLQGRDRGGDRDSQKRTRESAIDLAPLVDKKLRIKFV 62
Query: 57 GGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
GGR+VTG LKG D NLVLD+A+E++RDA DP T+QTR+LG +V RGT ++ ++ +
Sbjct: 63 GGREVTGILKGADPTSNLVLDDAIEYIRDAKDPYNITEQTRELGFLVARGTTILSIATEE 122
Query: 117 GT-DEIANPF 125
G I NP+
Sbjct: 123 GAFINIENPY 132
>gi|395327701|gb|EJF60098.1| LSM-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 96
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+ + T
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQENLQGLPEGQPT--- 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIAN 123
TR LGL+V RG + L+SP DG +EIAN
Sbjct: 62 TRNLGLVVLRGPTITLLSPVDGYEEIAN 89
>gi|294657422|ref|XP_459729.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
gi|199432680|emb|CAG87965.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
Length = 122
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 65/90 (72%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL + DK ++VK GGRQV G LKG+DQL+NLVL++ E +RD +D TD+
Sbjct: 28 KREAILDLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIRDPEDDNVLTDK 87
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR +G +V RG +++ +SP DG++ I NPF
Sbjct: 88 TRDIGFVVVRGPSLLTISPVDGSEIIDNPF 117
>gi|118397933|ref|XP_001031297.1| Sm protein [Tetrahymena thermophila]
gi|89285623|gb|EAR83634.1| Sm protein [Tetrahymena thermophila SB210]
Length = 103
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Query: 33 MSG----RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
MSG +KE++++L+++V K ++VK GGR+VTG LK +D LN++LD+ VE +RD +D
Sbjct: 1 MSGGQKQQKESIINLSQYVGKDIRVKFQGGREVTGVLKSFDNQLNMILDDCVETIRDKND 60
Query: 89 PLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
P T+Q R+L L+V RGT V + P GT+ I NPF+
Sbjct: 61 PYLMTEQKRKLNLVVVRGTLVSTIFPMSGTEIIENPFV 98
>gi|448090028|ref|XP_004196966.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|448094405|ref|XP_004197997.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359378388|emb|CCE84647.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359379419|emb|CCE83616.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
Length = 127
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ +K ++VK GGRQ+ G LKG+DQL+NLVL E LRD +D T +
Sbjct: 33 KREAILDLNKYTEKKIRVKFIGGRQIIGELKGFDQLMNLVLKNVEETLRDPEDDHVLTKE 92
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R L+V RG +++ +SP DG+ EI NPF Q
Sbjct: 93 KRNYDLVVVRGPSLLTISPLDGSGEIENPFAQ 124
>gi|354547245|emb|CCE43979.1| hypothetical protein CPAR2_502040 [Candida parapsilosis]
Length = 124
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 67/91 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ ++ ++V+ GGRQVTG LKGYDQL+NLVL++ E RD ++ K D+
Sbjct: 31 KREAILDLNKYKNEEIRVRFVGGRQVTGVLKGYDQLMNLVLEDVKEQFRDPENEGKYLDK 90
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL+V R T+++ +SP G++ I NPF+
Sbjct: 91 TRDLGLVVVRCTSLLTISPVKGSEIIDNPFV 121
>gi|344232902|gb|EGV64775.1| U6 snRNA-associated Sm-like protein LSm7 [Candida tenuis ATCC
10573]
Length = 129
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ D ++V+ GGRQ+ G LKG+DQL+NLVL+ E LRD +DP T
Sbjct: 33 KREAILDLNKYKDTQIKVEFIGGRQIVGVLKGFDQLMNLVLESVEETLRDPEDPNVLTKD 92
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LG +V RG +++ +SP DG++ I NPF+
Sbjct: 93 TRSLGRVVVRGPSLLTISPLDGSEVIDNPFV 123
>gi|402220188|gb|EJU00260.1| U6 snRNA-associated Sm-like protein LSm7 [Dacryopinax sp. DJM-731
SS1]
Length = 120
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDLAK+ ++VK GGR+VTG LKG+DQL+NLVLD+ VE L + +P K
Sbjct: 32 KREAILDLAKYESMRIRVKFQGGREVTGVLKGFDQLMNLVLDDVVENL--SSEPPK---- 85
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RG + L+SP DG +EI NPF+Q
Sbjct: 86 QRNLGLVVLRGPTITLLSPVDGWEEIENPFLQ 117
>gi|345323913|ref|XP_001506763.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Ornithorhynchus anatinus]
Length = 159
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 55/70 (78%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDG 117
GR+ +G LKG+D LLNLVLD +E++RD DD K T+ TRQLGL+VCRGT+V+L+ P DG
Sbjct: 86 GRESSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 145
Query: 118 TDEIANPFMQ 127
+ I NPF+Q
Sbjct: 146 MEAIPNPFIQ 155
>gi|405968071|gb|EKC33173.1| U6 snRNA-associated Sm-like protein LSm7, partial [Crassostrea
gigas]
Length = 69
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 52/65 (80%)
Query: 63 GTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIA 122
G LKGYD LLNLVLD+ E+LRD DDP K T+ TR LGL+VCRGT+V+L+ P DG + IA
Sbjct: 3 GVLKGYDPLLNLVLDDTTEYLRDPDDPYKLTEDTRTLGLVVCRGTSVVLICPADGMEAIA 62
Query: 123 NPFMQ 127
NPF+Q
Sbjct: 63 NPFVQ 67
>gi|156847090|ref|XP_001646430.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156117107|gb|EDO18572.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 126
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTD 94
++E ++DLAK+ D ++VKL GGR VTG LKGYD L+ LVLDE VE+LRD +D + D
Sbjct: 34 KREAIVDLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSIILKD 93
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEI 121
QTR LGL V RGT ++ +SP DG++ I
Sbjct: 94 QTRDLGLTVIRGTVLLSLSPVDGSETI 120
>gi|410080426|ref|XP_003957793.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS 2517]
gi|372464380|emb|CCF58658.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS 2517]
Length = 110
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 69/94 (73%), Gaps = 4/94 (4%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
S ++E ++DLAK+ D V+VKL GGR V G LKGYDQL+NLVLDE VE+++D++D + +
Sbjct: 18 SPKREAIIDLAKYKDSKVRVKLMGGRVVMGILKGYDQLMNLVLDETVEYIKDSNDEI-SR 76
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D+TR LG V RG ++ +SP +G++ I FMQ
Sbjct: 77 DRTRILGFTVIRGPILVSISPLEGSEVI---FMQ 107
>gi|260793868|ref|XP_002591932.1| hypothetical protein BRAFLDRAFT_220997 [Branchiostoma floridae]
gi|229277145|gb|EEN47943.1| hypothetical protein BRAFLDRAFT_220997 [Branchiostoma floridae]
Length = 70
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 62 TGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEI 121
+G LKGYD LLNLVLD E+ RD DDP K T+ TRQLGL+VCRGT+V+L+ P DG + I
Sbjct: 2 SGVLKGYDPLLNLVLDNTTEYQRDPDDPFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAI 61
Query: 122 ANPFMQPDG 130
NPF+Q +G
Sbjct: 62 PNPFVQQEG 70
>gi|226295235|gb|EEH50655.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 81
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 4/83 (4%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
++K V VK G R+VTGTLKGYDQL+NLVLD+ E +RD +D TR LGL+V RG
Sbjct: 1 MEKEVCVKFNGAREVTGTLKGYDQLMNLVLDDVKEVMRDDED----NQTTRPLGLVVARG 56
Query: 107 TAVMLVSPTDGTDEIANPFMQPD 129
T ++L+SP DG++EIANPF+Q +
Sbjct: 57 TLLVLISPVDGSEEIANPFLQAE 79
>gi|389585573|dbj|GAB68303.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium cynomolgi
strain B]
Length = 114
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++RD +D T++TR +GL
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSFVITEKTRSIGL 78
Query: 102 IVCRGTAVM-------LVSPTDGTDEIANPFM 126
+V RGT+V+ L++P DGT EI+NPF+
Sbjct: 79 VVARGTSVLSFFRHIALITPVDGTQEISNPFI 110
>gi|169598900|ref|XP_001792873.1| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
gi|160704495|gb|EAT90471.2| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
Length = 163
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 35/125 (28%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQ-------------------------------VTGT 64
+KE +LDL+K++DK + VK +GGR+ V GT
Sbjct: 42 KKENILDLSKYMDKQLTVKFSGGREERKTNGVMVAMFALGNRKILWKERHPLTHPPVIGT 101
Query: 65 LKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANP 124
LKGYDQL+NLVLDE E L D + ++ R+LGLIV RGT ++++SP DG++EIANP
Sbjct: 102 LKGYDQLMNLVLDEVKEALTDDEGNIRY----RKLGLIVARGTLLVVISPVDGSEEIANP 157
Query: 125 FMQPD 129
FMQ +
Sbjct: 158 FMQEE 162
>gi|440467485|gb|ELQ36705.1| hypothetical protein OOU_Y34scaffold00645g12 [Magnaporthe oryzae
Y34]
Length = 191
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 41/133 (30%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD------- 88
+KE +LDLAK++DK VQVK GGR+V GTLKGYD L+NLVLDE E +R
Sbjct: 54 KKENILDLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRGKSHSSFEGYA 113
Query: 89 -------------------------PLKT---------TDQTRQLGLIVCRGTAVMLVSP 114
PL + + +R LGL+V RGT ++ +SP
Sbjct: 114 DYSGRDEYQATALGCWRTRAHKPPYPLTSALRGKDEEGNESSRPLGLVVVRGTLLVAISP 173
Query: 115 TDGTDEIANPFMQ 127
TDG++ IANPF+Q
Sbjct: 174 TDGSESIANPFLQ 186
>gi|86196664|gb|EAQ71302.1| hypothetical protein MGCH7_ch7g709 [Magnaporthe oryzae 70-15]
Length = 82
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK VQVK GGR+V GTLKGYD L+NLVLDE E +RD + + +R LGL+V RG
Sbjct: 1 MDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEE----GNESSRPLGLVVVRG 56
Query: 107 TAVMLVSPTDGTDEIANPFMQ 127
T ++ +SPTDG++ IANPF+Q
Sbjct: 57 TLLVAISPTDGSESIANPFLQ 77
>gi|393219456|gb|EJD04943.1| U6 snRNA-associated Sm-like protein LSm7 [Fomitiporia mediterranea
MF3/22]
Length = 134
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K++++ ++VK TGGR+VTG LKGYDQLLNLVLD+ E L + +P K
Sbjct: 46 KREAILDLQKYMNERIRVKFTGGREVTGILKGYDQLLNLVLDDVEEQLHEP-EPRK---- 100
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
R LGL+V RG + L++P DG +EI NPF +
Sbjct: 101 -RSLGLVVLRGPTITLLNPVDGFEEIENPFAE 131
>gi|119589796|gb|EAW69390.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 146
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDG 117
GR +G LKG+D LLNLVLD +E++RD DD K T+ TRQLGL+VCRGT+V+L+ P DG
Sbjct: 73 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 132
Query: 118 TDEIANPFMQ 127
+ I NPF+Q
Sbjct: 133 MEAIPNPFIQ 142
>gi|3289993|gb|AAC25622.1|AAC25622 R30783_1 [Homo sapiens]
Length = 145
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDG 117
GR +G LKG+D LLNLVLD +E++RD DD K T+ TRQLGL+VCRGT+V+L+ P DG
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDG 131
Query: 118 TDEIANPFMQ 127
+ I NPF+Q
Sbjct: 132 MEAIPNPFIQ 141
>gi|448515624|ref|XP_003867376.1| Lsm7 protein [Candida orthopsilosis Co 90-125]
gi|380351715|emb|CCG21938.1| Lsm7 protein [Candida orthopsilosis]
Length = 124
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 67/91 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL K+ D+ ++V+ GGR+VTG LKGYDQL+NLVL++ E LRD + D+
Sbjct: 31 KREAILDLNKYKDEEIRVRFVGGRKVTGILKGYDQLMNLVLEDVQEQLRDPVIEGRYLDK 90
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR+LGL+V R T+++ +SP G++ I NPF+
Sbjct: 91 TRELGLVVVRCTSLLTISPVKGSEIIDNPFV 121
>gi|344238612|gb|EGV94715.1| U6 snRNA-associated Sm-like protein LSm7 [Cricetulus griseus]
Length = 130
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 61/83 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K +D+ ++VK GG + +G LKG+ LLNLVLD +E++RD DD K
Sbjct: 5 KEKKKKESILDLSKRIDETIRVKFQGGWEASGILKGFAPLLNLVLDGTIEYVRDPDDQYK 64
Query: 92 TTDQTRQLGLIVCRGTAVMLVSP 114
T+ RQLG +VCRGT+V+L+ P
Sbjct: 65 LTEDARQLGRVVCRGTSVVLICP 87
>gi|392587441|gb|EIW76775.1| U6 snRNA-associated Sm-like protein LSm7 [Coniophora puteana
RWD-64-598 SS2]
Length = 123
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLV+DE E + +
Sbjct: 35 KREAILDLSKYVNERIRVKFTGGREVTGILKGYDQLLNLVVDEVEEVVNEP-----APSH 89
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
TR LGL V RG V LVSP DG++EIANPF+
Sbjct: 90 TRSLGLAVLRGPTVTLVSPVDGSEEIANPFL 120
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE D
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDG-------RP 74
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIAN--PF 125
TR LGL+V RG ++LVSPTDG+ +N PF
Sbjct: 75 TRSLGLVVLRGPNIVLVSPTDGSSGKSNRKPF 106
>gi|300175124|emb|CBK20435.2| unnamed protein product [Blastocystis hominis]
Length = 82
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%)
Query: 55 LTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSP 114
+ GGR++ G LKG+D L+N+VLDEAVE++R+ DDP + + R LG+++CRGT +M V+P
Sbjct: 1 MQGGREIVGILKGFDSLMNIVLDEAVEYMRELDDPYELNGEQRTLGMVICRGTTIMTVNP 60
Query: 115 TDGTDEIANPF 125
+G EI NP+
Sbjct: 61 VEGMTEIQNPY 71
>gi|403217282|emb|CCK71777.1| hypothetical protein KNAG_0H03630 [Kazachstania naganishii CBS
8797]
Length = 119
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
S ++E ++DLAK+ D V+VKL G + V G LKGYDQL+NLVLDE E+L+DA+D + +
Sbjct: 27 SPKREAIVDLAKYKDSKVRVKLMGDKLVVGVLKGYDQLMNLVLDETAEYLKDANDEI-SR 85
Query: 94 DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D+TR LG V RG ++ +SP +G++ I +MQ
Sbjct: 86 DKTRDLGFTVIRGNILVSISPLEGSEVI---YMQ 116
>gi|398407359|ref|XP_003855145.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici IPO323]
gi|339475029|gb|EGP90121.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici IPO323]
Length = 83
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 4/83 (4%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + VK GGR+VTGTLKGYDQL+NLVLD E RD + +R LGL+V RG
Sbjct: 1 MDKDINVKFNGGREVTGTLKGYDQLMNLVLDNVKEMTRDE----EGNTSSRSLGLLVVRG 56
Query: 107 TAVMLVSPTDGTDEIANPFMQPD 129
T ++L+SP DG++EIANPF+ D
Sbjct: 57 TLLVLISPLDGSEEIANPFVVQD 79
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE D
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDG-------RP 74
Query: 96 TRQLGLIVCRGTAVMLVSPTDGT 118
TR LGL+V RG ++LVSPTDG+
Sbjct: 75 TRSLGLVVLRGPNIVLVSPTDGS 97
>gi|405119724|gb|AFR94496.1| U6 snRNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 131
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 7/83 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE D
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDG-------RP 74
Query: 96 TRQLGLIVCRGTAVMLVSPTDGT 118
TR LGL+V RG ++LVSPTDG+
Sbjct: 75 TRSLGLVVLRGPNIVLVSPTDGS 97
>gi|395513301|ref|XP_003760865.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Sarcophilus
harrisii]
Length = 97
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 62 TGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEI 121
+G LKG+D LLNLVLD +E++RD DD K T+ TRQLGL+VCRGT+V+L+ P DG + I
Sbjct: 28 SGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAI 87
Query: 122 ANPFMQ 127
NPF+Q
Sbjct: 88 PNPFIQ 93
>gi|194212415|ref|XP_001492851.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like [Equus
caballus]
Length = 89
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
V+ G +VK+ G +G LKG+D LLNLVLD +E++RD DD K T+ TR LGL+VCRG
Sbjct: 6 VNWGNRVKVNG-LIASGILKGFDPLLNLVLDGTIEYVRDPDDQYKLTEDTRPLGLVVCRG 64
Query: 107 TAVMLVSPTDGTDEIANPFMQ 127
T+V+L+ P DG + I NPF+Q
Sbjct: 65 TSVVLICPQDGMEAIPNPFVQ 85
>gi|365983778|ref|XP_003668722.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS 421]
gi|343767489|emb|CCD23479.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS 421]
Length = 121
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT-- 93
+++ ++DL+K+ D V+VKL GG+ VTG LKGYDQL+NLVLDE +++L++ DD + T
Sbjct: 27 KRDAIVDLSKYKDSKVRVKLMGGKIVTGILKGYDQLMNLVLDETIDYLKNPDDEIGTASL 86
Query: 94 -DQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+++R LGL V RG ++ +SP DG++ I +MQ
Sbjct: 87 KNKSRSLGLTVVRGPLLVSLSPIDGSEVI---YMQ 118
>gi|353234457|emb|CCA66482.1| related to snRNP protein [Piriformospora indica DSM 11827]
Length = 158
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E +LDL+K+V V+V TGGRQVTG LKG+DQLLNLVLD+ E + +
Sbjct: 72 KREAILDLSKYVGSKVRVTFTGGRQVTGILKGFDQLLNLVLDQVEEQVSELQ------QN 125
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
RQLGL V RG V L++P DG +EI +PF
Sbjct: 126 PRQLGLAVVRGPTVTLIAPDDGYEEIDDPF 155
>gi|350297191|gb|EGZ78168.1| U6 snRNA-associated Sm-like protein LSm7 [Neurospora tetrasperma
FGSC 2509]
Length = 82
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+D+ + VK GGR+VTGTLKGYD L+NLVLD+ E +RD + + TR LGL+V RG
Sbjct: 1 MDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEE----GNETTRPLGLVVARG 56
Query: 107 TAVMLVSPTDGTDEIANPFMQ 127
T ++++SP DG++ IANPF Q
Sbjct: 57 TLLVVISPVDGSEVIANPFAQ 77
>gi|304323323|gb|ADM24798.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323325|gb|ADM24799.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323327|gb|ADM24800.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323329|gb|ADM24801.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323335|gb|ADM24804.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323337|gb|ADM24805.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323341|gb|ADM24807.1| putative small nuclear ribonucleoprotein [Sporidiobolus johnsonii]
Length = 77
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT-TDQTRQLGLIVC 104
+VDK ++VK TGGR+V GTLKGYDQLLNLV+D+ E LRD D L + TR LGL V
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVL 60
Query: 105 RGTAVMLVSPTDGTDEI 121
RGT+++++SP DG+ EI
Sbjct: 61 RGTSLVVLSPVDGSAEI 77
>gi|399216804|emb|CCF73491.1| unnamed protein product [Babesia microti strain RI]
Length = 102
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 64/90 (71%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
+TV++L K+++K ++VK GGR+V G LKG+D + NLVLDEA EF +++ +++R
Sbjct: 12 KTVINLNKYLNKYIRVKFNGGREVRGLLKGFDVMSNLVLDEAEEFKCESESFYSFDEESR 71
Query: 98 QLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
LGL+V RGT+V L+ DGT I NPF++
Sbjct: 72 PLGLVVARGTSVALIFSDDGTVPIDNPFIE 101
>gi|304323319|gb|ADM24796.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323321|gb|ADM24797.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323331|gb|ADM24802.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323333|gb|ADM24803.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323339|gb|ADM24806.1| putative small nuclear ribonucleoprotein [Sporidiobolus johnsonii]
Length = 77
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT-TDQTRQLGLIVC 104
+VDK ++VK TGGR+V GTLKGYDQLLNLV+D+ E LRD D L + TR LGL V
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVL 60
Query: 105 RGTAVMLVSPTDGTDEI 121
RGT+++++SP DG+ EI
Sbjct: 61 RGTSLVVLSPLDGSAEI 77
>gi|854491|emb|CAA86879.1| orf2 [Saccharomyces cerevisiae]
gi|1302101|emb|CAA96030.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190409133|gb|EDV12398.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|349580792|dbj|GAA25951.1| K7_Lsm7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 107
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT--- 92
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++ + DD T
Sbjct: 15 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELI 74
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTD 119
+ R+LGL V RGT ++ +S +G+D
Sbjct: 75 SKNARKLGLTVIRGTILVSLSSAEGSD 101
>gi|158267618|ref|NP_014252.2| Lsm7p [Saccharomyces cerevisiae S288c]
gi|150421590|sp|P53905.2|LSM7_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|259149212|emb|CAY82454.1| Lsm7p [Saccharomyces cerevisiae EC1118]
gi|285814507|tpg|DAA10401.1| TPA: Lsm7p [Saccharomyces cerevisiae S288c]
gi|392296845|gb|EIW07946.1| Lsm7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 115
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT--- 92
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++ + DD T
Sbjct: 23 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELI 82
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTD 119
+ R+LGL V RGT ++ +S +G+D
Sbjct: 83 SKNARKLGLTVIRGTILVSLSSAEGSD 109
>gi|256269021|gb|EEU04361.1| Lsm7p [Saccharomyces cerevisiae JAY291]
Length = 108
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT--- 92
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++ + DD T
Sbjct: 16 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELI 75
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTD 119
+ R+LGL V RGT ++ +S +G+D
Sbjct: 76 SKNARKLGLTVIRGTILVSLSSAEGSD 102
>gi|443924506|gb|ELU43510.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 129
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 11/95 (11%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---DADDPL-- 90
R+E +LDL+K+ D+ ++VK TGGRQVTG LKGYDQLLNLVLD+ E + ++ PL
Sbjct: 34 RREAILDLSKYQDERIRVKFTGGRQVTGVLKGYDQLLNLVLDDVQEERQGTLSSNAPLGS 93
Query: 91 ------KTTDQTRQLGLIVCRGTAVMLVSPTDGTD 119
+ T TR LGL V RG + ++SP DG++
Sbjct: 94 ILNSGPEPTPHTRALGLAVLRGPTITILSPVDGSE 128
>gi|50309941|ref|XP_454984.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644119|emb|CAH00071.1| KLLA0E22881p [Kluyveromyces lactis]
Length = 110
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP-LKTTD 94
++E++++LA++ D V+VK GGR VTG LKGYD+L+NLVLDE VE+ RD +D + D
Sbjct: 22 KRESIINLAQYKDTEVRVKFIGGRLVTGILKGYDELMNLVLDETVEYARDPEDETIIHKD 81
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIAN 123
Q +++GL+V RGTA++ + +G EI N
Sbjct: 82 QAKKIGLVVIRGTALLSLCSLEGA-EIIN 109
>gi|50291047|ref|XP_447956.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527267|emb|CAG60907.1| unnamed protein product [Candida glabrata]
Length = 117
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E ++DL K+ D V VKL GGR VTG LKGYDQL+NLVL+E E L+ + T
Sbjct: 27 KREAIVDLGKYKDSKVSVKLMGGRIVTGILKGYDQLMNLVLEETEETLKPEVETGATQQV 86
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTD 119
TRQLGL V RGT ++ +SP DG++
Sbjct: 87 TRQLGLTVIRGTILISLSPLDGSE 110
>gi|151944390|gb|EDN62668.1| snRNP protein [Saccharomyces cerevisiae YJM789]
Length = 107
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT--- 92
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++ + DD T
Sbjct: 15 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMTNPDDENNTELI 74
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTD 119
+ R+LGL V RGT ++ +S +G+D
Sbjct: 75 SKNARKLGLTVIRGTILVSLSSAEGSD 101
>gi|367004679|ref|XP_003687072.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS 4417]
gi|357525375|emb|CCE64638.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS 4417]
Length = 120
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT-TD 94
+++ ++DL K+ D V+V+L GGR VTG LKGYD L+NLV+D A+E+++ DD + +
Sbjct: 28 KRDAIVDLGKYKDTEVRVELMGGRLVTGILKGYDSLMNLVIDNAIEYVKGLDDQVDVGKE 87
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEI 121
+ R+LGL V RGT + +SP DG++ I
Sbjct: 88 EKRELGLTVVRGTVLSSISPVDGSNVI 114
>gi|449266831|gb|EMC77828.1| U6 snRNA-associated Sm-like protein LSm7, partial [Columba livia]
Length = 101
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK 91
K +KE++LDL+K++DK ++VK GGR+ + + ++L D DD K
Sbjct: 2 KEKKKKESILDLSKYIDKTIRVKFQGGREGSRVFALAEDAVDLCGRGTGAAEPDPDDQYK 61
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 62 LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 97
>gi|392580035|gb|EIW73162.1| hypothetical protein TREMEDRAFT_24108, partial [Tremella
mesenterica DSM 1558]
Length = 79
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
++E++L+LA +VDK ++VK G R+VTGTLKG+DQL+NLV+D+ VE +
Sbjct: 4 KRESILNLANYVDKSIRVKFMGAREVTGTLKGFDQLMNLVMDDVVEEFENG-------MP 56
Query: 96 TRQLGLIVCRGTAVMLVSPTDGT 118
+R LGL+V RG + L+ PTDG+
Sbjct: 57 SRSLGLVVLRGPNITLILPTDGS 79
>gi|85001411|ref|XP_955424.1| u6 snrna-associated sm-like protein [Theileria annulata strain
Ankara]
gi|65303570|emb|CAI75948.1| u6 snrna-associated sm-like protein, putative [Theileria annulata]
Length = 87
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 55/74 (74%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
++V++L K ++K V VK +GGR+V G L+G+D + NLVLD+ VEFL+D+ D K T + R
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEFLKDSSDSSKLTGEKR 71
Query: 98 QLGLIVCRGTAVML 111
LGL+V RGT+V L
Sbjct: 72 NLGLLVARGTSVSL 85
>gi|403222744|dbj|BAM40875.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 89
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR 97
++V++L K ++K V VK +GGR+V G LKG+D + NLVLD+ VE LR DDP + +TR
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLKGHDAMSNLVLDDTVELLRSIDDPSTLSGETR 71
Query: 98 QLGLIVCRGTAV 109
LGL+V RGT+V
Sbjct: 72 NLGLLVARGTSV 83
>gi|320592629|gb|EFX05059.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 107
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+D+ + +K GGR+V+G LKG+D LLN+VLD A E +R+AD K +R LGL V RG
Sbjct: 1 MDREIYIKFNGGREVSGVLKGFDPLLNMVLDNAQEKMRNADGETK----SRSLGLAVIRG 56
Query: 107 TAVMLVSPTDGTDEIANPFM 126
T + + P DG++ I+NP++
Sbjct: 57 THITTLHPVDGSESISNPYL 76
>gi|198436839|ref|XP_002127812.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA associated
isoform 1 [Ciona intestinalis]
Length = 75
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 24/92 (26%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL+K++D+ ++VK GGR+ D DDP K +D
Sbjct: 6 KKESILDLSKYLDRPIRVKFHGGRE------------------------DPDDPYKLSDD 41
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL VCRGT+V+L+ P DG +EI NPF+Q
Sbjct: 42 TRALGLTVCRGTSVVLICPQDGMEEIPNPFVQ 73
>gi|308807046|ref|XP_003080834.1| putative snRNP splicing factor-related (ISS) [Ostreococcus tauri]
gi|116059295|emb|CAL55002.1| putative snRNP splicing factor-related (ISS) [Ostreococcus tauri]
Length = 112
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 15/95 (15%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K+TVLDLA+ +D+GV+VKL+GGR+VTG + + D T
Sbjct: 30 KDTVLDLARCIDRGVRVKLSGGREVTGRSRVRSIIRRCNADHG---------------GT 74
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
R+LGL+VCRGT+VM+VS DG DEI+NPF+ G
Sbjct: 75 RRLGLMVCRGTSVMVVSALDGCDEISNPFLGEGGG 109
>gi|384487006|gb|EIE79186.1| hypothetical protein RO3G_03891 [Rhizopus delemar RA 99-880]
Length = 96
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 19/98 (19%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF--------------LRDADDPLKT 92
++K ++V+ GGR+V GTL GYD LLNLVLD E+ L D L+T
Sbjct: 1 MEKKIRVRFNGGREVVGTLMGYDPLLNLVLDNTTEYQKGLCYLYVKVANLLPSVD--LET 58
Query: 93 ---TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
T+ R+LGL V RGTA++L+SP DG +EI NPF
Sbjct: 59 GYITENKRELGLSVLRGTAIILISPFDGMEEIENPFAH 96
>gi|444732354|gb|ELW72654.1| U6 snRNA-associated Sm-like protein LSm7 [Tupaia chinensis]
Length = 107
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++LDL+K++DK + +K GGR+ +GTLKG+D L NL+L+ ++++RD DD K TD
Sbjct: 7 KKESILDLSKYMDKTICMKFQGGREASGTLKGFDPLPNLLLNGTIKYMRDLDDQYKLTDN 66
Query: 96 TRQLGLIVCRG 106
T+QLG C G
Sbjct: 67 TQQLGWW-CAG 76
>gi|366990797|ref|XP_003675166.1| hypothetical protein NCAS_0B07110 [Naumovozyma castellii CBS 4309]
gi|342301030|emb|CCC68795.1| hypothetical protein NCAS_0B07110 [Naumovozyma castellii CBS 4309]
Length = 75
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 57 GGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT---DQTRQLGLIVCRGTAVMLVS 113
GG+ V+GTLKGYDQL+NLVLD+ +E+L+DAD + T+ D+TR+LG V RG ++ +S
Sbjct: 2 GGKLVSGTLKGYDQLMNLVLDDTIEYLKDADADIATSTVKDKTRELGFTVIRGPMLISLS 61
Query: 114 PTDGTDEI 121
P DG++ I
Sbjct: 62 PLDGSEVI 69
>gi|254565605|ref|XP_002489913.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029709|emb|CAY67632.1| hypothetical protein PAS_chr1-1_0487 [Komagataella pastoris GS115]
gi|328350324|emb|CCA36724.1| U6 snRNA-associated Sm-like protein LSm7 [Komagataella pastoris CBS
7435]
Length = 156
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 67/99 (67%), Gaps = 11/99 (11%)
Query: 36 RKETVLDLAKFVDKGVQVKLTG---GRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
++ ++++LA + DK +++ +G R+V G LKGYDQL+NLVLD DA++ LK+
Sbjct: 61 KRASIINLANYKDKQIRLTFSGVHDSREVIGCLKGYDQLMNLVLD-------DAEEILKS 113
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
T++ R LG ++ RG ++ ++ DG++E+ANPF Q + A
Sbjct: 114 TEK-RTLGRVIVRGPKLVSLALADGSEEVANPFTQNEEA 151
>gi|82538722|ref|XP_723795.1| U6 snRNA-associated sm-like protein Lsm7 [Plasmodium yoelii yoelii
17XNL]
gi|23478213|gb|EAA15360.1| u6 snRNA-associated sm-like protein lsm7 [Plasmodium yoelii yoelii]
Length = 92
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 16/85 (18%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ KF+++ ++VK GGR+ D+ EF+RD +D T+++R +GL
Sbjct: 20 DIKKFMNQKIRVKFDGGRE----------------DKTEEFIRDPNDSYVITEKSRNIGL 63
Query: 102 IVCRGTAVMLVSPTDGTDEIANPFM 126
IV RGT+V L++P +GT EI+NPF+
Sbjct: 64 IVARGTSVALITPVNGTQEISNPFI 88
>gi|336379227|gb|EGO20383.1| hypothetical protein SERLADRAFT_352208 [Serpula lacrymans var.
lacrymans S7.9]
Length = 63
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 6/66 (9%)
Query: 61 VTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDE 120
V G LKGYDQLLNLVLDE E + + + +R LGL V RG + LVSP DG +E
Sbjct: 1 VVGILKGYDQLLNLVLDEVEEQINEPEP------HSRSLGLAVLRGPTITLVSPVDGLEE 54
Query: 121 IANPFM 126
IANPF+
Sbjct: 55 IANPFV 60
>gi|70996088|ref|XP_752799.1| small nuclear ribonucleoprotein (LSM7) [Aspergillus fumigatus
Af293]
gi|44890026|emb|CAF32144.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850434|gb|EAL90761.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus Af293]
gi|159131553|gb|EDP56666.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus A1163]
Length = 134
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +R
Sbjct: 48 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMR 96
>gi|339237711|ref|XP_003380410.1| putative fibronectin type III domain protein [Trichinella
spiralis]
gi|316976745|gb|EFV59974.1| putative fibronectin type III domain protein [Trichinella
spiralis]
Length = 2755
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
+KETV++L+ +++K ++VK GGR++TG LKGYDQLLNLVLD E+L D D
Sbjct: 8 KKETVINLSNYIEKALRVKFQGGREITGILKGYDQLLNLVLDNTTEYLPDFVD 60
>gi|401889144|gb|EJT53084.1| hypothetical protein A1Q1_00091 [Trichosporon asahii var. asahii
CBS 2479]
Length = 82
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 41/46 (89%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E++L+LA++VD+ ++VK GGR+VTG LKGYDQL+NLV+DE VE
Sbjct: 25 KRESILNLAQYVDQSIRVKFLGGREVTGVLKGYDQLMNLVMDEVVE 70
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQVTG L+GYD +NLV+DE+VE + + + Q+G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRQVTGVLRGYDPFMNLVMDESVEEI--------SGGEKHQIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ D
Sbjct: 60 VVIRGNSIIMLEALD 74
>gi|149034481|gb|EDL89218.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 91
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD------ADDP 89
+KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R +
Sbjct: 8 KKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRGELAEVVGEMT 67
Query: 90 LKTTDQTRQLGLIVCRGTA 108
L DQT G + CR A
Sbjct: 68 LGLCDQTMPGGDLGCRPLA 86
>gi|409076181|gb|EKM76554.1| hypothetical protein AGABI1DRAFT_131111 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 130
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDLAK+V++ ++VK GGR+V GTLKGYDQLLNLVLD+ E
Sbjct: 39 KREAILDLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQE 84
>gi|426193423|gb|EKV43356.1| hypothetical protein AGABI2DRAFT_121482 [Agaricus bisporus var.
bisporus H97]
Length = 127
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDLAK+V++ ++VK GGR+V GTLKGYDQLLNLVLD+ E
Sbjct: 39 KREAILDLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQE 84
>gi|145518536|ref|XP_001445140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412584|emb|CAK77743.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
KE+++ L ++K V ++ GGRQV GTL +D LLNLVLDE E
Sbjct: 6 KESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNLLNLVLDEVREL-----------PSQ 54
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R LGL++CRG A++ DG EI NP+M
Sbjct: 55 RILGLVICRG-ALINSFAIDGMVEIENPYM 83
>gi|297275718|ref|XP_001117654.2| PREDICTED: hypothetical protein LOC721486 [Macaca mulatta]
Length = 151
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 41/51 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP 89
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RD + P
Sbjct: 39 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDLEAP 89
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK +++KL G R V+G L+G+D +N+V+DEAVE+ ++ + + LG+
Sbjct: 8 ELKKYMDKEIELKLNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGN--------SINLGM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ P +
Sbjct: 60 TVIRGNSVVIMEPKE 74
>gi|403363323|gb|EJY81404.1| Small nuclear ribonucleoprotein polypeptide G [Oxytricha trifallax]
Length = 79
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ ++ DL KF+D V ++L R V G LKGYDQ LN+VLD A+E +
Sbjct: 1 MASKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEII--------N 52
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTD 116
D+ R+LG IV RG +V++ D
Sbjct: 53 KDEKRELGTIVIRGNSVVMWENLD 76
>gi|148699537|gb|EDL31484.1| mCG12127, isoform CRA_e [Mus musculus]
Length = 78
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMR 56
>gi|403372169|gb|EJY85976.1| Small nuclear ribonucleoprotein G, putative [Oxytricha trifallax]
Length = 709
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ ++ DL KF+D V ++L R V G LKGYDQ LN+VLD A+E +
Sbjct: 1 MASKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEII--------N 52
Query: 93 TDQTRQLGLIVCRGTAVML 111
D+ R+LG IV RG +V++
Sbjct: 53 KDEKRELGTIVIRGNSVVM 71
>gi|210076097|ref|XP_002143124.1| YALI0F30426p [Yarrowia lipolytica]
gi|199424991|emb|CAR65212.1| YALI0F30426p [Yarrowia lipolytica CLIB122]
Length = 165
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPL----- 90
++E +LDL++F +K V VK+TG R++ GTLKG+DQL+NL+LD+ E + + ++
Sbjct: 64 KREPILDLSRFENKRVVVKVTG-RKIEGTLKGWDQLMNLILDDVKETIYEDEESEDFAEF 122
Query: 91 --KTTDQTRQLGLIVCRGTAVMLVSPTDG 117
+ + R++GL V RG ++ + P DG
Sbjct: 123 EGQKEGKVREIGLAVIRGPNLLSIYPLDG 151
>gi|109077009|ref|XP_001097013.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca mulatta]
Length = 75
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 8/70 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVML 111
+V RG ++ML
Sbjct: 60 VVIRGNSIML 69
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GR VTG L+G+D +NLVLDE+VE +D Q +G+
Sbjct: 8 ELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG--------QRNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ D
Sbjct: 60 VVIRGNSIIMLESLD 74
>gi|443727637|gb|ELU14316.1| hypothetical protein CAPTEDRAFT_142894, partial [Capitella
teleta]
Length = 56
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KET+LDL+K++DK V+VK +GGR+ G LKG+D LLNLVLD E LR
Sbjct: 2 KEKKKKETILDLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTENLR 54
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQVTG L+G+D +NLV+DE++E RD +G+
Sbjct: 8 ELKKFMDKKLCLKLNGGRQVTGILRGFDPFMNLVVDESIEECRDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ D
Sbjct: 60 VVIRGNSIVMLEALD 74
>gi|170576974|ref|XP_001893831.1| small nuclear ribonucleoprotein G [Brugia malayi]
gi|312077085|ref|XP_003141148.1| small nuclear ribonucleoprotein G [Loa loa]
gi|158599912|gb|EDP37330.1| small nuclear ribonucleoprotein G, putative [Brugia malayi]
gi|307763686|gb|EFO22920.1| small nuclear ribonucleoprotein G [Loa loa]
Length = 79
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V +KL G R V+G L+G+D +N+V+++AVE L++ D ++G+
Sbjct: 8 ELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKNGD--------KNEIGM 59
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +++++ P + D+
Sbjct: 60 VVIRGNSIVIMEPKERLDQ 78
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK +KL GR VTG L+G+D +NLVLDE+VE +D Q +G+
Sbjct: 8 ELKKFMDKKWSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDG--------QRNNVGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ D
Sbjct: 60 VVIRGNSIIMLESLD 74
>gi|452979544|gb|EME79306.1| hypothetical protein MYCFIDRAFT_71922 [Pseudocercospora fijiensis
CIRAD86]
Length = 84
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E K ++ +LG+
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATES--------KPNNEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTDGTD 119
V RG +V+++ D D
Sbjct: 59 CVIRGNSVVMMEALDRID 76
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G [Tribolium
castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQV G L+G+D +NLV+DE+VE RD + +G+
Sbjct: 8 ELKKFMDKKLCLKLNGGRQVVGILRGFDPFMNLVVDESVEECRDG--------KKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ D
Sbjct: 60 VVIRGNSIVMLEALD 74
>gi|324514246|gb|ADY45805.1| Small nuclear ribonucleoprotein G [Ascaris suum]
Length = 79
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 51/78 (65%), Gaps = 8/78 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL G R V+G L+G+D +N+V+++AVE L++ ++ LG+
Sbjct: 8 ELKKYMDKHMDLKLNGNRHVSGVLRGFDPFMNIVVEDAVEHLKNG--------ESNTLGM 59
Query: 102 IVCRGTAVMLVSPTDGTD 119
+V RG +++++ P + D
Sbjct: 60 VVIRGNSIVIMEPKERLD 77
>gi|145517616|ref|XP_001444691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412113|emb|CAK77294.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
KE+++ L ++K V ++ GGRQV GTL +D LNLVLDE E
Sbjct: 6 KESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDEVREL-----------PSQ 54
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R LGL++CRG A++ DG EI NP++
Sbjct: 55 RILGLVICRG-ALINSFAIDGMVEIENPYI 83
>gi|313217530|emb|CBY38609.1| unnamed protein product [Oikopleura dioica]
gi|313236587|emb|CBY19879.1| unnamed protein product [Oikopleura dioica]
Length = 76
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+D+ + VK+ GGR+V G L+G+D +NLV+D+A+E+ +D + + +G+
Sbjct: 8 ELKKFMDRKMSVKVNGGRKVEGVLRGFDPFMNLVIDDAIEYRKD--------NSSHTMGM 59
Query: 102 IVCRGTAVMLV 112
V RG +V+++
Sbjct: 60 CVIRGNSVLMI 70
>gi|160773943|gb|AAI55032.1| LOC100127774 protein [Xenopus (Silurana) tropicalis]
Length = 49
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 83 LRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+RD DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 1 MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 45
>gi|17510511|ref|NP_491032.1| Protein SNR-7 [Caenorhabditis elegans]
gi|29428018|sp|Q9N4G9.1|RUXG_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|12276019|gb|AAG50222.1|AF303264_1 SM protein G [Caenorhabditis elegans]
gi|351062434|emb|CCD70411.1| Protein SNR-7 [Caenorhabditis elegans]
Length = 77
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL G R+V+G L+G+D +N+V+DEAVE+ +D + LG+
Sbjct: 8 ELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGG--------SVNLGM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ P +
Sbjct: 60 TVIRGNSVVIMEPKE 74
>gi|452842262|gb|EME44198.1| hypothetical protein DOTSEDRAFT_71875 [Dothistroma septosporum
NZE10]
Length = 85
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E K + +LG+
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATES--------KPNGEKARLGM 58
Query: 102 IVCRGTAVMLVSPTDGTD 119
V RG +V+++ D D
Sbjct: 59 CVIRGNSVVMMEALDRID 76
>gi|33416583|gb|AAH55642.1| Lsm7 protein [Danio rerio]
Length = 49
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 83 LRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+RD DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 1 MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 45
>gi|308505206|ref|XP_003114786.1| CRE-SNR-7 protein [Caenorhabditis remanei]
gi|308258968|gb|EFP02921.1| CRE-SNR-7 protein [Caenorhabditis remanei]
Length = 77
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL G RQV+G L+G+D +N+V+DEAVE+ + P+ LG+
Sbjct: 8 ELKKYMDKEMDLKLNGNRQVSGILRGFDPFMNMVIDEAVEYPKSG-TPI-------NLGM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ P +
Sbjct: 60 TVIRGNSVVIMEPKE 74
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus corporis]
Length = 76
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQV G L+G+D +NLV+DE+VE ++ +G+
Sbjct: 8 ELKKFMDKKLALKLNGGRQVNGILRGFDPFMNLVIDESVEICKNG--------THNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVVMLEALD 74
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL G R+VTG L+G+D +NLV+DEA E + +T Q +G+
Sbjct: 8 ELKKFMDKRLSLKLNGNRRVTGVLRGFDPFMNLVIDEATEDI--------STTQKNDIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++L+ D
Sbjct: 60 VVVRGNSIILLEALD 74
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V +KL G R V+G L+G+D +N+V+++AVE L+ D ++G+
Sbjct: 8 ELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKSGD--------KNEIGM 59
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +++++ P + D+
Sbjct: 60 VVIRGNSIVIMEPKERLDQ 78
>gi|148666746|gb|EDK99162.1| mCG130514, isoform CRA_b [Mus musculus]
Length = 99
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 27 FLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
F SL + ++ V +F+DK + +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 16 FQTSLGLKKKRHCVSKSLRFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE----- 70
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
+ T+ Q +G++V RG +++++ +
Sbjct: 71 ---MATSGQQNNIGMVVIRGNSIIMLEALE 97
>gi|383420999|gb|AFH33713.1| small nuclear ribonucleoprotein G [Macaca mulatta]
Length = 76
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 60 VVIRGNSIIMLEALE 74
>gi|149034480|gb|EDL89217.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 49
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 83 LRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+RD DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 1 MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 45
>gi|440900234|gb|ELR51419.1| Small nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 76
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L KF+DK V +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++
Sbjct: 9 LKKFMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVE--------MATSGQQNNIGMV 60
Query: 103 VCRGTAVMLVS 113
V RG +++++
Sbjct: 61 VIRGNSIIMLE 71
>gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein G [Homo sapiens]
gi|13385994|ref|NP_080782.1| small nuclear ribonucleoprotein G [Mus musculus]
gi|94966887|ref|NP_001035633.1| small nuclear ribonucleoprotein G [Bos taurus]
gi|205360903|ref|NP_001128557.1| small nuclear ribonucleoprotein polypeptide G [Rattus norvegicus]
gi|301172846|ref|NP_001180369.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|356640205|ref|NP_001239260.1| small nuclear ribonucleoprotein G [Canis lupus familiaris]
gi|109461740|ref|XP_001079708.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|296223614|ref|XP_002757696.1| PREDICTED: small nuclear ribonucleoprotein G-like [Callithrix
jacchus]
gi|297667399|ref|XP_002811973.1| PREDICTED: small nuclear ribonucleoprotein G isoform 2 [Pongo
abelii]
gi|301758206|ref|XP_002914946.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ailuropoda
melanoleuca]
gi|311252444|ref|XP_003125100.1| PREDICTED: small nuclear ribonucleoprotein G-like [Sus scrofa]
gi|332226773|ref|XP_003262565.1| PREDICTED: small nuclear ribonucleoprotein G isoform 1 [Nomascus
leucogenys]
gi|338714212|ref|XP_003363026.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus caballus]
gi|344283913|ref|XP_003413715.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
gi|348566567|ref|XP_003469073.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cavia porcellus]
gi|354491761|ref|XP_003508023.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|392344154|ref|XP_003748887.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|402891180|ref|XP_003908832.1| PREDICTED: small nuclear ribonucleoprotein G [Papio anubis]
gi|403260478|ref|XP_003922698.1| PREDICTED: small nuclear ribonucleoprotein G [Saimiri boliviensis
boliviensis]
gi|410955001|ref|XP_003984147.1| PREDICTED: small nuclear ribonucleoprotein G [Felis catus]
gi|426223378|ref|XP_004005852.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
gi|59800216|sp|P62308.1|RUXG_HUMAN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|59800217|sp|P62309.1|RUXG_MOUSE RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|109894862|sp|Q3ZBL0.1|RUXG_BOVIN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|225734046|pdb|3CW1|G Chain G, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734055|pdb|3CW1|3 Chain 3, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734064|pdb|3CW1|4 Chain 4, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734073|pdb|3CW1|5 Chain 5, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583606|pdb|3PGW|G Chain G, Crystal Structure Of Human U1 Snrnp
gi|315583615|pdb|3PGW|J Chain J, Crystal Structure Of Human U1 Snrnp
gi|332639439|pdb|2Y9A|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639446|pdb|2Y9A|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639453|pdb|2Y9A|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639463|pdb|2Y9B|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639470|pdb|2Y9B|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639477|pdb|2Y9B|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639487|pdb|2Y9C|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639494|pdb|2Y9C|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639501|pdb|2Y9C|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639511|pdb|2Y9D|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639518|pdb|2Y9D|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639525|pdb|2Y9D|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781214|pdb|3S6N|G Chain G, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302204|pdb|4F7U|G Chain G, Macromolecular Machine 6
gi|444302205|pdb|4F7U|J Chain J, Macromolecular Machine 6
gi|453055429|pdb|1VU2|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055437|pdb|1VU2|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055445|pdb|1VU2|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055453|pdb|1VU2|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055461|pdb|1VU2|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055469|pdb|1VU2|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453055473|pdb|1VU2|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|453055485|pdb|1VU3|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055493|pdb|1VU3|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055501|pdb|1VU3|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055509|pdb|1VU3|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055517|pdb|1VU3|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055525|pdb|1VU3|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056017|pdb|4F77|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453056025|pdb|4F77|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453056033|pdb|4F77|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453056041|pdb|4F77|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453056049|pdb|4F77|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453056057|pdb|4F77|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056061|pdb|4F77|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|806566|emb|CAA59689.1| Sm protein G [Homo sapiens]
gi|12652645|gb|AAH00070.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|12849786|dbj|BAB28480.1| unnamed protein product [Mus musculus]
gi|12850471|dbj|BAB28732.1| unnamed protein product [Mus musculus]
gi|18490257|gb|AAH22432.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|20380602|gb|AAH27499.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|30185984|gb|AAH51470.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|42542824|gb|AAH66302.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|47682759|gb|AAH70166.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|48145953|emb|CAG33199.1| SNRPG [Homo sapiens]
gi|62420278|gb|AAX81996.1| unknown [Homo sapiens]
gi|62948132|gb|AAH94411.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|73586825|gb|AAI03237.1| Small nuclear ribonucleoprotein polypeptide G [Bos taurus]
gi|76779243|gb|AAI06056.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|119620223|gb|EAW99817.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a [Homo
sapiens]
gi|119620224|gb|EAW99818.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a [Homo
sapiens]
gi|127799349|gb|AAH71880.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|148666745|gb|EDK99161.1| mCG130514, isoform CRA_a [Mus musculus]
gi|149036610|gb|EDL91228.1| rCG56468, isoform CRA_b [Rattus norvegicus]
gi|197246583|gb|AAI68750.1| Snrpg protein [Rattus norvegicus]
gi|208967440|dbj|BAG73734.1| small nuclear ribonucleoprotein polypeptide G [synthetic construct]
gi|296477039|tpg|DAA19154.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
gi|296482417|tpg|DAA24532.1| TPA: small nuclear ribonucleoprotein G [Bos taurus]
gi|312153260|gb|ADQ33142.1| small nuclear ribonucleoprotein polypeptide G [synthetic construct]
gi|380808500|gb|AFE76125.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|384944568|gb|AFI35889.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|410265648|gb|JAA20790.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|410348384|gb|JAA40796.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|431912604|gb|ELK14622.1| Small nuclear ribonucleoprotein G [Pteropus alecto]
Length = 76
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|449299266|gb|EMC95280.1| hypothetical protein BAUCODRAFT_577920 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E K ++ +LG+
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATES--------KPNNEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ D
Sbjct: 59 CVIRGNSVVMMEALD 73
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V+G L+GYD +NLVLD+AVE + + ++ +G+
Sbjct: 8 ELKKYMDKKLSLKLNGGRHVSGVLRGYDPFMNLVLDDAVENV--------SGNEKHAIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++ + D
Sbjct: 60 VVIRGNSIVTMEALD 74
>gi|294887859|ref|XP_002772254.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
gi|239876324|gb|EER04070.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
Length = 87
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +F++K + VKL R V G ++GYDQ +NLVLD AVE + + + R++G+
Sbjct: 16 DLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELV--------SRTEKREIGM 67
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++ D
Sbjct: 68 VVIRGNSILMWECLD 82
>gi|341882586|gb|EGT38521.1| hypothetical protein CAEBREN_25112 [Caenorhabditis brenneri]
gi|341895108|gb|EGT51043.1| hypothetical protein CAEBREN_10134 [Caenorhabditis brenneri]
Length = 77
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL G R V+G L+G+D +N+V+DEAVE+ + + LG+
Sbjct: 8 ELKKYMDKEMDLKLNGNRHVSGILRGFDPFMNMVIDEAVEYTKSG--------ASVNLGM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ P +
Sbjct: 60 TVIRGNSVVIMEPKE 74
>gi|119719338|ref|YP_919833.1| like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
gi|119524458|gb|ABL77830.1| Like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
Length = 73
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
T+ LA+ ++K V VKL GGR++ G LK YD LNLVL+ A E +TRQ
Sbjct: 5 TISVLAESLEKNVLVKLKGGREIRGQLKSYDYHLNLVLENAEEI---------RGTRTRQ 55
Query: 99 LGLIVCRGTAVMLVSP 114
LG I+ RG V+LVSP
Sbjct: 56 LGTIIVRGDNVILVSP 71
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD 87
L LKMS K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE +D
Sbjct: 21 LPQLKMS--KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD-- 76
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
+ +G++V RG ++++V D
Sbjct: 77 ------NTKNNIGMVVIRGNSIVMVEALD 99
>gi|355750359|gb|EHH54697.1| hypothetical protein EGM_15585 [Macaca fascicularis]
Length = 76
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSSKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +++DK + ++L R+V+G L+G+DQ +NLVL++ VE + ++ + +LG+
Sbjct: 8 DLRRYMDKKLAIRLNANRRVSGILRGFDQFMNLVLEDTVEEV--------SSTEKNELGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+L+ P +
Sbjct: 60 VVIRGNSVILIEPLE 74
>gi|453085821|gb|EMF13864.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 84
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E K + +LG+
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATES--------KPNGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD--GTDE 120
V RG +V+++ D G DE
Sbjct: 59 CVIRGNSVVMLEALDRIGGDE 79
>gi|410957729|ref|XP_003985477.1| PREDICTED: small nuclear ribonucleoprotein G-like [Felis catus]
Length = 76
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D ++LV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDSFMHLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 60 VVIRGNSIIMLEALE 74
>gi|109122308|ref|XP_001087684.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca mulatta]
gi|354490736|ref|XP_003507512.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344246755|gb|EGW02859.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|401411851|ref|XP_003885373.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
gi|325119792|emb|CBZ55345.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
Length = 169
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 94
G+ DL +F++K + V L+GGR+V G L+GYD +N+VL+ VE + +P +
Sbjct: 6 GKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVEVKGNPANPANSGG 65
Query: 95 -QTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
+T ++G +V RG +++ D F Q
Sbjct: 66 TETNEIGFVVVRGNSILYWECLDKVRTCGQGFFQ 99
>gi|291386619|ref|XP_002709854.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MANSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR VTGTL+G+D +NLV+DEA+E + T + +G+
Sbjct: 8 ELKKYMDKRLTLKLNGGRVVTGTLRGFDPFMNLVVDEAIEQCK--------TGEQNSIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++ L+ D
Sbjct: 60 VVVRGNSITLLEALD 74
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Nasonia
vitripennis]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|428181287|gb|EKX50151.1| small nuclear ribonucleo protein polypeptide G [Guillardia theta
CCMP2712]
Length = 78
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK V +KL R +TG L+GYDQ +NLVLD E + T Q ++G+
Sbjct: 8 DLKKYMDKRVTLKLNANRNITGILRGYDQFMNLVLDHTQEVV--------TPTQRNEIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++ +V D
Sbjct: 60 VVVRGNSISMVECVD 74
>gi|291398958|ref|XP_002715163.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFINLVIDECVE--------MANSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|294891050|ref|XP_002773395.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
gi|239878548|gb|EER05211.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
Length = 85
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL KF++K + +KL G R V G L+GYDQ +NLVLD AVE + + + + +G+
Sbjct: 15 DLRKFMEKRLDLKLNGNRHVVGVLRGYDQFMNLVLDNAVELV--------SRTEKKDIGM 66
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V++ D
Sbjct: 67 TVIRGNSVLMWECLD 81
>gi|426238536|ref|XP_004013207.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGLDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|323448261|gb|EGB04162.1| hypothetical protein AURANDRAFT_32975 [Aureococcus anophagefferens]
Length = 77
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK + +K+ G R+V+G L+GYDQ LNLVL++A E D D KT +G+
Sbjct: 8 DLKKYMDKALTIKMNGNRRVSGVLRGYDQFLNLVLEDATE---DGSDGAKTP-----IGM 59
Query: 102 IVCRGTAVM 110
+V RG ++
Sbjct: 60 VVLRGNGII 68
>gi|358421445|ref|XP_003584961.1| PREDICTED: small nuclear ribonucleoprotein G-like [Bos taurus]
gi|296486781|tpg|DAA28894.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRLVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|403301993|ref|XP_003941654.1| PREDICTED: small nuclear ribonucleoprotein G-like [Saimiri
boliviensis boliviensis]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG ++++
Sbjct: 60 VVIRGNGIIMLE 71
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL G R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+V+DE+VE +D +G+
Sbjct: 8 ELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDG--------SQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|294950648|ref|XP_002786721.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
gi|239901040|gb|EER18517.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
Length = 87
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +F++K + VKL R V G ++GYDQ +NLVLD AVE + + + R++G+
Sbjct: 16 DLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELV--------SRTEKREIGM 67
Query: 102 IVCRGTAVMLVSPTD 116
V RG ++++ D
Sbjct: 68 AVIRGNSILMWECLD 82
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK +Q++L G R+++G L+G+D +N+V+DEAVE LKT +Q +G+
Sbjct: 8 ELKKYMDKKMQLRLNGDRKISGVLRGFDPFMNMVIDEAVEH-------LKTGEQI-MIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V L+
Sbjct: 60 VVVRGNSVTLMQ 71
>gi|296488612|tpg|DAA30725.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L KF+DK + +KL GGR V G L G+D +NLV+DE VE + T+ Q +G++
Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVE--------MATSGQQNNIGMV 60
Query: 103 VCRGTAVMLVS 113
V RG +++++
Sbjct: 61 VIRGNSIIMLE 71
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R + GTL+GYDQ +N+V+D VE ++ +G+
Sbjct: 9 DLKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTV 70
>gi|354481504|ref|XP_003502941.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344250923|gb|EGW07027.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q + +
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNISM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 60 VVIRGNSIIMLEALE 74
>gi|157119614|ref|XP_001659450.1| Sm protein G, putative [Aedes aegypti]
gi|108875262|gb|EAT39487.1| AAEL008719-PA [Aedes aegypti]
Length = 76
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR-QLG 100
+L K++DK + +KL GGR V+G L+G+D +N+VLDE++E + D TR +G
Sbjct: 8 ELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIE---------ECKDSTRNNIG 58
Query: 101 LIVCRGTAVMLVSPTD 116
++V RG ++++V D
Sbjct: 59 MVVIRGNSIIMVEALD 74
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|112253333|gb|ABI14254.1| small nuclear ribonucleoprotein polypeptide G [Pfiesteria
piscicida]
Length = 78
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL KF++K + +KLT R V G L+GYDQ +N+VLD VE + + + ++G+
Sbjct: 9 DLRKFMEKRLDLKLTANRHVVGVLRGYDQFMNIVLDNTVE--------IASPTEKNEIGM 60
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++M+ D
Sbjct: 61 VVIRGNSIMMWECLD 75
>gi|344250803|gb|EGW06907.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 82
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+F+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V
Sbjct: 17 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVI 68
Query: 105 RGTAVMLVSPTD 116
RG +++++ +
Sbjct: 69 RGNSIIMLEALE 80
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E K + +LG+
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATES--------KPNAEKVRLGM 58
Query: 102 IVCRGTAVMLVS 113
V RG +V+++
Sbjct: 59 CVIRGNSVVMME 70
>gi|205829943|sp|A8MWD9.2|RUXGL_HUMAN RecName: Full=Small nuclear ribonucleoprotein G-like protein
Length = 76
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF DK +KL GGR V G L+G+D +NLV+DE VE + T+ Q + +G+
Sbjct: 8 ELKKFTDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQKNIGM 59
Query: 102 IVCRGTAVMLVS 113
+ RG +++++
Sbjct: 60 VEIRGNSIIMLE 71
>gi|340370971|ref|XP_003384019.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Amphimedon queenslandica]
Length = 78
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MSGR +L K++DK +Q++L G R +TG L+G+D +N+VLD+ VE ++
Sbjct: 1 MSGRAHPP-ELKKYMDKRLQLRLNGNRTITGILRGFDPYMNVVLDDCVEE--------RS 51
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
+ Q +G++V RG +V+L+
Sbjct: 52 SHQKFNIGMVVVRGNSVVLIE 72
>gi|431907864|gb|ELK11471.1| U6 snRNA-associated Sm-like protein LSm7 [Pteropus alecto]
Length = 69
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 74 LVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
L L +E++RD ++ K + T QLGL+VCRGT+V+L+ P D + I NPF+Q A
Sbjct: 12 LDLSNTIEYMRDPNNQYKLIEDTLQLGLVVCRGTSVVLICPQDSMEAIPNPFIQQQEA 69
>gi|344303705|gb|EGW33954.1| hypothetical protein SPAPADRAFT_59353 [Spathaspora passalidarum
NRRL Y-27907]
Length = 80
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 6/80 (7%)
Query: 37 KETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RDADDPLKTTD 94
KE LDL +F +D+ V +KL G R++ G L+GYD N+VL EA E++ D++D +
Sbjct: 4 KEEPLDLIRFHLDEFVLIKLRGAREIKGKLQGYDSHCNMVLSEAEEYIYNDSNDDV---- 59
Query: 95 QTRQLGLIVCRGTAVMLVSP 114
+T++ ++ RG +V+L+SP
Sbjct: 60 ETKKTEMVFVRGDSVILISP 79
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|109510961|ref|XP_001057009.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392343298|ref|XP_003754845.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392355788|ref|XP_003752134.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D ++LV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILQGFDPFMSLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|302694279|ref|XP_003036818.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune H4-8]
gi|300110515|gb|EFJ01916.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune H4-8]
Length = 77
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+DEA+E T Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDEALE--------ETTPGQKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|281347286|gb|EFB22870.1| hypothetical protein PANDA_015540 [Ailuropoda melanoleuca]
Length = 47
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 1 DPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 43
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Bombus
terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Bombus
impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus floridanus]
Length = 76
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+V+DE+VE +D +G+
Sbjct: 8 ELKKYMDKRLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 9/71 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R VTGTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++ V
Sbjct: 60 VVIRGNSIVTV 70
>gi|426257282|ref|XP_004022258.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q G++
Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVE--------MATSGQQNNTGMV 60
Query: 103 VCRGTAVMLVS 113
V RG +++++
Sbjct: 61 VIRGNSIIMLE 71
>gi|355755297|gb|EHH59044.1| hypothetical protein EGM_09046, partial [Macaca fascicularis]
Length = 49
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 3 DPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 45
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V KL GGR V GTL+G+D +NLV+D+ VE KT D+ R +G+
Sbjct: 8 ELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVE-------ARKTGDRVR-IGV 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG++++++ D
Sbjct: 60 VVIRGSSIIMLEALD 74
>gi|355751391|gb|EHH55646.1| hypothetical protein EGM_04892 [Macaca fascicularis]
Length = 76
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D + LV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMTLVIDECVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKYMDKRLSLKLNGGRHVVGILRGFDPFMNMVIDESIEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G [Taeniopygia
guttata]
Length = 76
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MAAGGQQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 60 VVIRGNSIIMLEALE 74
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEV---------NGDEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVLRGNSVVMIE 71
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE +D + +G+
Sbjct: 8 ELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIVMVEALD 74
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK + +KL GR V G L+G+DQ +NLVLD VE + AD ++G+
Sbjct: 9 DLKKYMDKKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE-INGAD--------RNEIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MAPGGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos saltator]
Length = 76
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GR VTG L+G+D +N+V+DE VE +D +G+
Sbjct: 8 ELKKYMDKKLSLKLNAGRHVTGILRGFDPFMNMVIDETVEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE +D + +G+
Sbjct: 8 ELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNSIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIVMVEALD 74
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGDEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVLRGNSVVTVE 71
>gi|109048997|ref|XP_001112504.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca mulatta]
Length = 76
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVE--------MAISGQQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++ +
Sbjct: 60 VVIRGNNIIMLEALE 74
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex echinatior]
Length = 76
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR+V G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKYMDKRLSLKLNGGRRVVGILRGFDPFMNMVIDESIEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein [Crassostrea
ariakensis]
Length = 77
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + +KL GGRQ+ G L+G+D +NLV+DE +E + + Q+G+
Sbjct: 8 ELKKYMEKKINLKLNGGRQIQGILRGFDPFMNLVVDECIEETK--------LGERNQIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++L+ D
Sbjct: 60 VVVRGNSIILLEALD 74
>gi|297527485|ref|YP_003669509.1| hypothetical protein Shell_1522 [Staphylothermus hellenicus DSM
12710]
gi|297256401|gb|ADI32610.1| Like-Sm ribonucleoprotein core [Staphylothermus hellenicus DSM
12710]
Length = 75
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 8/67 (11%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V +KL G R+V G LK YDQ LN+VLD+A E ++ TR+LG IV RG V+
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEE--------IRENGSTRKLGTIVIRGDTVI 68
Query: 111 LVSPTDG 117
L+SP G
Sbjct: 69 LISPIKG 75
>gi|169860675|ref|XP_001836972.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea okayama7#130]
gi|116501694|gb|EAU84589.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea okayama7#130]
Length = 78
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + + L GGR+V+GTL+GYD LNLV+D+AVE T Q +G
Sbjct: 8 ELKKFMDKKLFIHLQGGRKVSGTLRGYDLFLNLVIDDAVE--------ETTPGQKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|426248212|ref|XP_004017858.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L G+D +NLV+DE VE + T+ Q G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRLVQGILWGFDPFMNLVIDECVE--------MATSGQQNNFGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 60 VVIRGNSIIMLEALE 74
>gi|114577940|ref|XP_001142444.1| PREDICTED: small nuclear ribonucleoprotein G isoform 3 [Pan
troglodytes]
Length = 85
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+F+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V
Sbjct: 20 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVI 71
Query: 105 RGTAVMLVSPTD 116
RG +++++ +
Sbjct: 72 RGNSIIMLEALE 83
>gi|126465841|ref|YP_001040950.1| LSM family small nuclear ribonucleoprotein [Staphylothermus marinus
F1]
gi|126014664|gb|ABN70042.1| Small nuclear ribonucleoprotein, LSM family [Staphylothermus
marinus F1]
Length = 75
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V +KL G R+V G LK YDQ LN+VLD+A E D TR+LG IV RG V+
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEEIKEDG--------STRKLGTIVIRGDTVI 68
Query: 111 LVSP 114
L+SP
Sbjct: 69 LISP 72
>gi|170106101|ref|XP_001884262.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640608|gb|EDR04872.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 78
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E A Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPA--------QKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|443899154|dbj|GAC76485.1| hypothetical protein PANT_22d00050 [Pseudozyma antarctica T-34]
Length = 536
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-DADDPLKTTDQTRQLG 100
+L +F+DK + V + GGR+V GTL+G+D LNLV+D+A+E + DA +P D R G
Sbjct: 8 ELKRFLDKRIAVNIQGGRKVQGTLRGFDMFLNLVVDDAIEQVHPDAGNPNVWQDGER-CG 66
Query: 101 LIVCRGTAV 109
+V RG +V
Sbjct: 67 TVVVRGNSV 75
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR VTG L+G+D +N+VLD+ +E +D KT + +G+
Sbjct: 8 ELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKD-----KTKN---NVGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++LV D
Sbjct: 60 VVIRGNSIVLVEALD 74
>gi|397521832|ref|XP_003830990.1| PREDICTED: small nuclear ribonucleoprotein G [Pan paniscus]
Length = 85
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+F+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V
Sbjct: 20 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVI 71
Query: 105 RGTAVMLVSPTD 116
RG +++++ +
Sbjct: 72 RGNSIIMLEALE 83
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR + G L+G+D +NLV+DE VE ++D +G+
Sbjct: 8 ELKKYMDKRMSLKLNGGRNIVGILRGFDPFMNLVIDETVEEVKDG--------SKNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVVRGNSIIMLE 71
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR VTG L+G+D +N+VLD+ +E +D + +G+
Sbjct: 8 ELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKD--------NTKNSIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIVMVEALD 74
>gi|302309677|ref|XP_002999529.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049117|emb|CAR58012.1| unnamed protein product [Candida glabrata]
Length = 76
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+VDK + ++L G RQV G L+GYD LN+VLD+A+E L+D + K QT
Sbjct: 6 ELKKYVDKKILLQLNGSRQVAGVLRGYDLFLNVVLDDAIELLKDGEKQ-KLGSQT----- 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG++++ + D
Sbjct: 60 -VVRGSSILSLEALD 73
>gi|390601213|gb|EIN10607.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 77
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E T Q LG
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEE--------TTPAQKHPLGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|389746943|gb|EIM88122.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 77
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E T Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIE--------ETTPAQKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|187610687|gb|ACD13592.1| small nuclear ribonucleoprotein polypeptide G [Penaeus monodon]
gi|408842889|gb|AFU93450.1| small nuclear ribonucleoprotein polypeptide G [Litopenaeus
vannamei]
Length = 77
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V KL GGR V GTL+G+D +NLV+D+ VE R D ++G
Sbjct: 8 ELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEVRRSGD--------RVRVGF 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG++++++ D
Sbjct: 60 VVIRGSSIIMLEALD 74
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +K+ GGRQV G L+G+D +NLVLDE+ E + + +G+
Sbjct: 8 ELKKFMDKKLSLKINGGRQVQGILRGFDPFMNLVLDESTE--------ISGSGNQNSIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|402861349|ref|XP_003895059.1| PREDICTED: small nuclear ribonucleoprotein G-like [Papio anubis]
Length = 76
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR+V G L+G+D +NLV+DE VE + + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRRVQGILQGFDPFMNLVIDECVE--------MAISGQQNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++ +
Sbjct: 60 VVIRGNNIIMLEALE 74
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|410053341|ref|XP_003953440.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
G-like protein-like [Pan troglodytes]
Length = 74
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K L+L KF+DK +KL GGR V G L+G+D +NLV+DE VE + T+ Q
Sbjct: 3 KAHPLELKKFMDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQ 54
Query: 97 RQLGLIVCRGTAVMLVSPTD 116
+G++ G +++++ +
Sbjct: 55 NNIGMVEIXGNSIIMLEALE 74
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Glycine
max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|350535404|ref|NP_001232194.1| putative small nuclear ribonucleoprotein polypeptide G [Taeniopygia
guttata]
gi|197127873|gb|ACH44371.1| putative small nuclear ribonucleoprotein polypeptide G [Taeniopygia
guttata]
Length = 74
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEI----------CGQQNNIGM 57
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 58 VVIRGNSIIMLEALE 72
>gi|164429561|ref|XP_964114.2| hypothetical protein NCU01930 [Neurospora crassa OR74A]
gi|157073529|gb|EAA34878.2| hypothetical protein NCU01930 [Neurospora crassa OR74A]
Length = 119
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 28/92 (30%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +LDL K++D+ + VK GGR+ DE + +
Sbjct: 51 KKENILDLKKYMDQRITVKFNGGRE----------------DE------------EGNET 82
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
TR LGL+V RGT ++++SP DG++ IANPF Q
Sbjct: 83 TRPLGLVVARGTLLVVISPVDGSEVIANPFAQ 114
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS K +L KF+DK VQ+KL R + G L+GYD +NLVL+E +E T
Sbjct: 1 MSSTKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIE----------T 50
Query: 93 TDQTRQ--LGLIVCRGTAVMLVSPTD 116
T Q + +G IV RG +++++ D
Sbjct: 51 TKQGHRNPVGTIVIRGNSIVMLEAKD 76
>gi|194232190|ref|XP_001918135.1| PREDICTED: hypothetical protein LOC100147236, partial [Equus
caballus]
Length = 319
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
D DD K T+ TR LGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 273 DPDDQYKLTEDTRPLGLVVCRGTSVVLICPQDGMEAIPNPFVQ 315
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +++DK + +KL RQV G L+G+D +NLVLDE VE ++D +G+
Sbjct: 8 ELKRYLDKKLSLKLNANRQVAGVLRGFDPFMNLVLDETVEKIKDG--------VVNSIGM 59
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +V+ + D D+
Sbjct: 60 VVIRGDSVLTIEALDRIDQ 78
>gi|392568108|gb|EIW61282.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
gi|395328913|gb|EJF61303.1| like-Sm ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
gi|449549694|gb|EMD40659.1| hypothetical protein CERSUDRAFT_111239 [Ceriporiopsis subvermispora
B]
Length = 77
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E A Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETNPA--------QKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|71006012|ref|XP_757672.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
gi|46097347|gb|EAK82580.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
Length = 134
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 12 FFIVCRSARVS---FNLGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGY 68
+ +CR++ + L L+ L+ K + +L +F+DK + V + GGR++ GTL+G+
Sbjct: 23 LYALCRTSSLHDLYLPLAQLEVLRKMA-KVSQPELKRFLDKRIAVNIQGGRKIQGTLRGF 81
Query: 69 DQLLNLVLDEAVEFLR-DADDPLKTTDQTRQLGLIVCRGTAV 109
D LNLV+DEA+E + +A +P D R G +V RG +V
Sbjct: 82 DMFLNLVVDEAIEQVHPEAGNPNVWQDGDR-CGTVVVRGNSV 122
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK + +KL R V GTL+G+DQ +NLVLD VE ++ ++G+
Sbjct: 9 DLKKYMDKKLNIKLNANRVVVGTLRGFDQFMNLVLDGTVEV---------NGNERNEIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +V+++
Sbjct: 60 VVIRGNSVVMI 70
>gi|109112083|ref|XP_001087555.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca mulatta]
Length = 76
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + KL GGR V G L +D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSSKLNGGRHVQGILWAFDPFMNLVIDEYVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A [Drosophila
melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B [Drosophila
melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A [Drosophila
melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B [Drosophila
melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
++ K++DK + +KL GGR VTG L+G+D +N+VLD+ VE +D + +G+
Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKD--------NTKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIVMVEALD 74
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVVRGNSVVMIE 71
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|150866473|ref|XP_001386093.2| hypothetical protein PICST_63621 [Scheffersomyces stipitis CBS
6054]
gi|149387729|gb|ABN68064.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 88
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+ +++ +++ LDL +F +D+ V VKL G R++ G L+GYD N+VL EA E++ A
Sbjct: 1 MSTIRTESQQQEPLDLIRFQLDEFVLVKLRGAREMKGRLQGYDSHCNMVLSEAEEYIYSA 60
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSP 114
D +T ++ RG +V+L+SP
Sbjct: 61 GDEETVVKKTE---MVFVRGDSVILISP 85
>gi|58382854|ref|XP_312222.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|170033098|ref|XP_001844416.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|55242066|gb|EAA07689.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|167873530|gb|EDS36913.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 76
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V+G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVVDESIEECKDG--------TRNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIIMVEALD 74
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+V+DE++E +D +G+
Sbjct: 8 ELKKYMDKRLSLKLNGGRTVIGILRGFDPFMNMVIDESIEECKDG--------TKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 60 VVIRGNSVIMLEALD 74
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|67468165|ref|XP_650141.1| small nuclear ribonucleo protein G [Entamoeba histolytica
HM-1:IMSS]
gi|56466712|gb|EAL44755.1| small nuclear ribonucleo protein G, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407041678|gb|EKE40885.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449707868|gb|EMD47446.1| small nuclear ribonucleo protein G, putative [Entamoeba histolytica
KU27]
Length = 81
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +++K + VK+ G R + G L GYD+ +NLVLDEA DA +P TD+ +G+
Sbjct: 7 ELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAY----DASNP--DTDKHIPIGM 60
Query: 102 IVCRGTAVMLVSPTD 116
I+ RG +++ V D
Sbjct: 61 IMIRGNSILSVETID 75
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride IMI
206040]
Length = 83
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L GGR+V G L+GYD LN+VLDEAVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNVVLDEAVEE--------KDGGEKIRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|109126394|ref|XP_001109294.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like, partial
[Macaca mulatta]
Length = 46
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 86 ADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFMQ 127
DD K T+ TRQLGL+VCRGT+V+L+ P DG + I NPF+Q
Sbjct: 1 PDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ 42
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L GGR+V G L+GYD LN+VLDEAVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNIVLDEAVEE--------KEGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|336373417|gb|EGO01755.1| hypothetical protein SERLA73DRAFT_177234 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386246|gb|EGO27392.1| hypothetical protein SERLADRAFT_460722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 77
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E T Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRRVSGTLRGYDLFLNLVIDDALEE--------TTPAQKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|426195723|gb|EKV45652.1| hypothetical protein AGABI2DRAFT_72502 [Agaricus bisporus var.
bisporus H97]
Length = 78
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V L GGR+V+GTL+GYD LNLV+D+A+E T Q +G
Sbjct: 8 ELKKYMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEE--------TTPAQKHPIGQ 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+GTL+G+D LNLVLD+A+E T Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGFDIFLNLVLDDAIE--------ETTPAQKSPIGN 59
Query: 102 IVCRGTAVMLV 112
+V RG +V L+
Sbjct: 60 VVIRGNSVTLM 70
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLEKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV---------NGNEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G; 65009-64161
[Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G [Arabidopsis
thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G [Arabidopsis
thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + DD TD +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEV--NGDD---KTD----IGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++ V
Sbjct: 60 VVIRGNSIVTVE 71
>gi|237830743|ref|XP_002364669.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|211962333|gb|EEA97528.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|221487756|gb|EEE25988.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
GT1]
gi|221507550|gb|EEE33154.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
VEG]
Length = 93
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTT 93
G+ DL +F++K + V L+GGR+V G L+GYD +N+VL+ VE + A+
Sbjct: 6 GKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVEVKGNPANSASSGG 65
Query: 94 DQTRQLGLIVCRGTAVM 110
+T ++G +V RG +++
Sbjct: 66 TETNEIGFVVVRGNSIL 82
>gi|169602875|ref|XP_001794859.1| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
gi|160706278|gb|EAT88201.2| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
Length = 84
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E K + ++G+
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEE--------KAGGEKTRIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG AV+++ D ++
Sbjct: 59 VVIRGNAVVMLEALDRINQ 77
>gi|448090794|ref|XP_004197162.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|448095234|ref|XP_004198193.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359378584|emb|CCE84843.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359379615|emb|CCE83812.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+ + + G + DL ++ +D+ V VKL G R++ G L+GYD N+VL +AVE++ D
Sbjct: 1 MSNTDVDGNPQEPFDLVRYQLDELVLVKLRGAREMKGRLQGYDSHCNMVLSDAVEYIYDL 60
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
+ + + ++ ++ RG +V+L++P +
Sbjct: 61 GEEVNSNPTVKKSEMVFVRGDSVILINPIN 90
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+++E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIE--------ISAGGQQNSIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 12/86 (13%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS K +L KF+DK VQ+KL R + G L+GYD +NLVL+E +E T
Sbjct: 1 MSSTKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIE----------T 50
Query: 93 TDQTRQ--LGLIVCRGTAVMLVSPTD 116
T Q + +G +V RG +++++ D
Sbjct: 51 TKQGHRNPVGTVVIRGNSIVMLEAKD 76
>gi|296484107|tpg|DAA26222.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 75
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
K +DK V +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V
Sbjct: 10 KSMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVE--------MATSGQQNNIGMVVI 61
Query: 105 RGTAVMLVS 113
RG +++++
Sbjct: 62 RGNSIIMLE 70
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++D+ + +KL GR V G L+G+DQ +NLVLD VE + ++G+
Sbjct: 9 DLKKYMDRKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEV---------QGAEKNEIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 60 VVIRGNSVVMIEALE 74
>gi|355567875|gb|EHH24216.1| hypothetical protein EGK_07838 [Macaca mulatta]
Length = 76
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + KL GGR V G L+ +D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSSKLNGGRHVQGILRAFDPFMNLVIDEYVE--------MATSGQQNNIGM 59
Query: 102 IVCRGTAVMLV 112
+V +G +++++
Sbjct: 60 VVIQGNSIIML 70
>gi|147921633|ref|YP_684550.1| small nuclear ribonucleoprotein [Methanocella arvoryzae MRE50]
gi|121685694|sp|Q0W8R9.1|RUXX_UNCMA RecName: Full=Putative snRNP Sm-like protein
gi|110619946|emb|CAJ35224.1| putative small nuclear ribonucleoprotein (snRNP) Sm-like protein
[Methanocella arvoryzae MRE50]
Length = 72
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVLD A E LK
Sbjct: 1 MSQRPLDVLNEA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEE--------LKE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ +R+LG I+ RG V+ VSP
Sbjct: 51 NEASRKLGTIIVRGDTVVYVSP 72
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|451850030|gb|EMD63333.1| hypothetical protein COCSADRAFT_38193 [Cochliobolus sativus ND90Pr]
gi|452001852|gb|EMD94311.1| hypothetical protein COCHEDRAFT_1170230 [Cochliobolus
heterostrophus C5]
Length = 84
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E K + ++G+
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEE--------KAGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG AV+++ D ++
Sbjct: 59 VVIRGNAVVMLEALDRINQ 77
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL GGR V G L+G+D +N+VLD+ +E +D + +G+
Sbjct: 8 ELKKYMDKRMMLKLNGGRAVNGILRGFDPFMNVVLDDTIEECKD--------NTKNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++++V D
Sbjct: 60 VVIRGNSIVMVEALD 74
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+++E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIE--------ISAGGQQNPIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|432112555|gb|ELK35271.1| Small nuclear ribonucleoprotein G [Myotis davidii]
Length = 76
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATGGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+ +G +++++
Sbjct: 60 VAIQGNSIIMLE 71
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like isoform
1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like isoform
2 [Brachypodium distachyon]
Length = 81
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEV---------NGNEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVVRGNSVVMIE 71
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE + D+T +G+
Sbjct: 9 DLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--------VNGNDKT-DIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVIRGNSVVMIE 71
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D V+ D+ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDV---------NGDEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF++K + +K+ G R V GTL+G+D +N+VLD+ VE + ++ + LG+
Sbjct: 8 ELKKFMEKRLSIKINGNRTVVGTLRGFDPFMNIVLDDTVEQV--------SSKENNHLGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +V+++
Sbjct: 60 VVIRGNSVVMM 70
>gi|124028416|ref|YP_001013736.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
gi|123979110|gb|ABM81391.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
Length = 77
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V VKL G +V G LK YDQ LNLVL++A E D +TR+LG IV RG V+
Sbjct: 17 VLVKLKGANEVRGRLKSYDQHLNLVLEDAEEIYEDG--------RTRKLGTIVIRGDTVL 68
Query: 111 LVSP 114
L+SP
Sbjct: 69 LISP 72
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L KF+DK + +KL GR V G L+G+D +NLV+DE VE + T+ Q +G++
Sbjct: 114 LKKFMDKKLSLKLNDGRHVQGILQGFDPFMNLVIDECVE--------MATSGQQNNIGMV 165
Query: 103 VCRGTAVMLV 112
V RG ++++
Sbjct: 166 VIRGNNIIML 175
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEV---------NGNDRNDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 60 VVLRGNSVVMIE 71
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K + +L K++DK + ++L G R+VTG L+GYD +N+VLDE VE + + +
Sbjct: 3 KTSTPELKKYMDKRISLQLNGNRKVTGVLRGYDPFMNIVLDETVEEV--------SPTER 54
Query: 97 RQLGLIVCRGTAVMLVS 113
+G++V RG ++ ++
Sbjct: 55 NNIGMVVIRGNSIAIME 71
>gi|355561845|gb|EHH18477.1| hypothetical protein EGK_15086 [Macaca mulatta]
Length = 63
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V RG
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRG 52
Query: 107 TAVML 111
++ML
Sbjct: 53 NSIML 57
>gi|50421915|ref|XP_459516.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
gi|49655184|emb|CAG87742.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
Length = 88
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+ +++ +++ LDL ++ +D+ V VKL G R++ G L+GYD N++L +AVE++ D
Sbjct: 1 MSTVRTEQQQQEPLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVEYIYDV 60
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
P T+ ++ RG +V+L+SP +
Sbjct: 61 --PEGQEPVTKNTDMVFVRGDSVILISPVN 88
>gi|282164954|ref|YP_003357339.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
gi|282157268|dbj|BAI62356.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
Length = 72
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVLD A E LK
Sbjct: 1 MSQRPLDVLNDA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEE--------LKE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+++++LG I+ RG V+ VSP
Sbjct: 51 NEESKKLGTIIVRGDTVVYVSP 72
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE +E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDETLE--------MGPGGQQSSIGM 59
Query: 102 IVCRGTAVMLV 112
+V RG +++++
Sbjct: 60 VVIRGNSIIML 70
>gi|383320750|ref|YP_005381591.1| Small nuclear ribonucleoprotein, LSM family [Methanocella conradii
HZ254]
gi|379322120|gb|AFD01073.1| Small nuclear ribonucleoprotein, LSM family [Methanocella conradii
HZ254]
Length = 72
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVL+ A E LK
Sbjct: 1 MSQRPLDVLNDA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLENAEE--------LKE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+++R+LG I+ RG V+ VSP
Sbjct: 51 NEESRKLGTIIVRGDTVVYVSP 72
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+G L+GYD LNLVLD+A+E T Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGVLRGYDLFLNLVLDDALEE--------TTPAQKHPIGT 59
Query: 102 IVCRGTAVMLVSPTDGT 118
+V RG +V + + T
Sbjct: 60 VVIRGNSVTSMETLEAT 76
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KEGGEKVRLGM 58
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 59 VVIRGNSVVMLE 70
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
sativus]
Length = 80
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 9 DLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVEV---------NGNEKTDIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V+ V
Sbjct: 60 VVIRGNSVVTVE 71
>gi|343428207|emb|CBQ71737.1| probable SMX2-snRNP G protein [Sporisorium reilianum SRZ2]
Length = 87
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +F+DK + V + GGR++ GTL+G+D LNLV+D+AVE +R + G
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAVEQVRPEAGNTNAWHDGDRCGT 67
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 68 VVVRGNSV 75
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R VTG L+G+D +NLVLDE VE + + +G+
Sbjct: 8 ELKKYMDKKLSLRLNGSRVVTGILRGFDPFMNLVLDETVEETKGG--------EKHNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++L+ D
Sbjct: 60 VVVRGNSIVLLESQD 74
>gi|367051545|ref|XP_003656151.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL 8126]
gi|347003416|gb|AEO69815.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL 8126]
Length = 83
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KDNGEKAKLGM 58
Query: 102 IVCRGTAVMLVSPTD--GTDE 120
+V RG +V+++ + G DE
Sbjct: 59 VVIRGNSVVMLEALERIGGDE 79
>gi|310798750|gb|EFQ33643.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 84
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KEGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|399217705|emb|CCF74592.1| unnamed protein product [Babesia microti strain RI]
Length = 79
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+G+ +DL +F++K + + L G R + G L+GYD +N+VLD A LK
Sbjct: 1 MAGKTGPAVDLRRFMEKRLDIYLNGHRHIVGVLRGYDTFMNIVLDNA----------LKI 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTD 116
D+ +LG +V RG +++ D
Sbjct: 51 GDEKEELGTVVLRGNSIVCWECLD 74
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R +TG L+G+D +NLVLDE VE + + +G+
Sbjct: 8 ELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEEAKGG--------EKHNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++L+ D
Sbjct: 60 VVVRGNSIVLLESQD 74
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIE--------MAPGGQMNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|340897533|gb|EGS17123.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 82
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE + + +LG+
Sbjct: 7 ELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEE--------RPNGEKVKLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+ RG +V+++ P +
Sbjct: 59 VTIRGNSVVILEPLE 73
>gi|255727663|ref|XP_002548757.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
gi|240133073|gb|EER32629.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
Length = 92
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ-TRQ 98
LDL +F +D+ V VKL G R++ G L+GYD N+VL +A EF+ D+ K D ++
Sbjct: 15 LDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAQEFIYSLDENSKIKDPIVKK 74
Query: 99 LGLIVCRGTAVMLVSPT 115
++ RG +V+L+SP
Sbjct: 75 TDMVFVRGDSVILISPV 91
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KDGGEKIRLGM 58
Query: 102 IVCRGTAVMLVSPTD--GTDEIAN 123
+V RG +V+++ + G D+ N
Sbjct: 59 VVIRGNSVVMLEALERIGGDDRQN 82
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E K + ++G+
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEE--------KAGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +V+++ D ++
Sbjct: 59 VVIRGNSVVMLEALDRINQ 77
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIE--------MAPGGQMNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|198427430|ref|XP_002130422.1| PREDICTED: similar to small nuclear ribonucleoprotein G [Ciona
intestinalis]
Length = 89
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR + G L+G+D +NLV+D+ + +D ++G+
Sbjct: 21 ELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGIGKRKDG--------SVEKIGM 72
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ D
Sbjct: 73 VVVRGNSVLMMEAVD 87
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-DADDPLKTTDQTRQLG 100
+L +F+DK + V + GGR++ GTL+G+D LNLV+D+A+E + +A +P D R G
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAIEQVHPEAGNPNVWQDGDR-CG 66
Query: 101 LIVCRGTAV 109
+V RG +V
Sbjct: 67 TVVVRGNSV 75
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVE--------EKEGGEKVRLGM 58
Query: 102 IVCRGTAVM 110
+V RG +V+
Sbjct: 59 VVIRGNSVV 67
>gi|402083491|gb|EJT78509.1| sm snRNP core protein Smg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 86
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V V+L G R+V G ++GYD LN+VLDEA E D D K +LG+
Sbjct: 7 ELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLDEAFE---DKDGGEKV-----KLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEAME 73
>gi|392592906|gb|EIW82232.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 77
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L GGR+V+G L+GYD LNLV+D+A+E A Q +G
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGILRGYDLFLNLVIDDALEESSPA--------QKHPIGT 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|213513524|ref|NP_001134580.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|209734434|gb|ACI68086.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|303659717|gb|ADM15968.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQV G L+G+D +NLV+D+ +E A ++ T +GL
Sbjct: 8 ELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEM---APGGIQNT-----IGL 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|46107748|ref|XP_380933.1| hypothetical protein FG00757.1 [Gibberella zeae PH-1]
gi|408399451|gb|EKJ78553.1| hypothetical protein FPSE_01277 [Fusarium pseudograminearum CS3096]
Length = 84
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KDNGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|330835854|ref|YP_004410582.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
gi|329567993|gb|AEB96098.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
Length = 75
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ V V VKL G ++V G LK YDQ +NLVL ++VE + D+ +++G I
Sbjct: 9 LAESVGSLVLVKLKGNKEVRGYLKSYDQHMNLVLSDSVEIQNNNDE--------KKMGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDNVILISP 72
>gi|395815302|ref|XP_003781169.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 73
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K +DK + L GGR V G L+G+D L+NLV+DE +E + T+ Q +G+
Sbjct: 8 ELKKIIDKKLPWTLNGGRHVQGILQGFDTLMNLVIDECME--------MSTSGQQNNIGM 59
Query: 102 IVCRGTAVML 111
+V +G +V+L
Sbjct: 60 VVIQGNSVIL 69
>gi|209879283|ref|XP_002141082.1| small nuclear ribonucleoprotein G [Cryptosporidium muris RN66]
gi|209556688|gb|EEA06733.1| small nuclear ribonucleoprotein G, putative [Cryptosporidium muris
RN66]
Length = 81
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +F+DK + +KL G R + G L+GYD +NLVL+ VE T+ +++G
Sbjct: 11 DLRRFMDKRLDIKLNGKRHIVGLLRGYDNFMNLVLENTVEV---------TSKGNKEIGT 61
Query: 102 IVCRGTAVMLVSPTD 116
++ RG +V++ D
Sbjct: 62 VIIRGNSVVMWECLD 76
>gi|221053452|ref|XP_002258100.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193807933|emb|CAQ38637.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 83
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +QV L G RQ+ G L+GYD +NLVLD VE + +Q +G+
Sbjct: 13 DFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVEIKK---------EQQIDIGI 63
Query: 102 IVCRGTAVMLVSPTDGTD 119
+V RG ++ D D
Sbjct: 64 VVIRGNSISYWECLDRVD 81
>gi|293345587|ref|XP_002726075.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL G R+V G L+G+D +NLV+DE VE + T+ Q +G
Sbjct: 8 ELKKFMDKKLSLKLNGTRRVQGILRGFDPFMNLVIDECVEMV--------TSGQQNIIGT 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|320164748|gb|EFW41647.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 77
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+D+ V +KL G R+V+G L+G+D +N+VLDE E + ++ + ++G+
Sbjct: 8 ELKKFLDRRVILKLNGNRKVSGILRGFDPFMNVVLDETFEEVSES--------ERHEIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+ RG ++ +V D
Sbjct: 60 VAIRGNSINMVETVD 74
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R +TG L+G+D +NLVLDE VE + + +G+
Sbjct: 8 ELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGG--------EKHDIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++L+ D
Sbjct: 60 VVVRGNSIVLLESQD 74
>gi|384244771|gb|EIE18269.1| small nuclear ribonucleo protein polypeptide G [Coccomyxa
subellipsoidea C-169]
Length = 73
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V L RQVTG L+G+DQ +N+VLD AV D TD +G+
Sbjct: 8 ELKKFMDKKLSVSLNANRQVTGVLRGFDQFMNIVLDNAV-------DEKNKTD----IGM 56
Query: 102 IVCRGTAVM 110
+V RG +++
Sbjct: 57 VVVRGNSII 65
>gi|109465326|ref|XP_001075060.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL G R+V G L+G+D NLV+DE VE + T+ Q +G
Sbjct: 8 ELKKFMDKKLSLKLNGTRRVQGILRGFDPFTNLVIDECVEMV--------TSGQQNNIGT 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+++E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSLE--------MGPGGQQNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + +KL R VTG L+G+D +NLV+D+ VE +T + +G+
Sbjct: 8 ELKKYMDKRLHLKLNCNRSVTGILRGFDPFMNLVIDDTVEN--------TSTQERNNIGM 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+L+ D
Sbjct: 60 VVIRGNSVVLMEALD 74
>gi|119188491|ref|XP_001244852.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320031840|gb|EFW13798.1| small nuclear ribonucleoprotein SmG [Coccidioides posadasii str.
Silveira]
gi|392867766|gb|EAS33463.2| small nuclear ribonucleoprotein SmG [Coccidioides immitis RS]
Length = 78
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + +++ G R+V G L+GYD +N+VLDEA+E KT + +LG+
Sbjct: 7 ELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIEE--------KTGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|449019835|dbj|BAM83237.1| U6 snRNA-associated Sm-like protein LSm3 [Cyanidioschyzon merolae
strain 10D]
Length = 102
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 21 VSFNLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+SF +G G+ E ++L + +D+ V VKL G R++ GTL YDQ LNL++ +A
Sbjct: 1 MSFTVG-------KGQLEEPVELLRIALDERVFVKLKGDRELVGTLHAYDQHLNLIISDA 53
Query: 80 VEFLRDADDPLKTTDQT-----RQLGLIVCRGTAVMLVSP 114
E L+ A+ +T +Q R+L L+ RG V LVSP
Sbjct: 54 EETLQKAELDEETYEQIVRQERRKLQLVYVRGDTVFLVSP 93
>gi|346971880|gb|EGY15332.1| hypothetical protein VDAG_06186 [Verticillium dahliae VdLs.17]
Length = 85
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KEGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|156097813|ref|XP_001614939.1| small nuclear ribonucleoprotein G [Plasmodium vivax Sal-1]
gi|148803813|gb|EDL45212.1| small nuclear ribonucleoprotein G, putative [Plasmodium vivax]
gi|389582433|dbj|GAB65171.1| small nuclear ribonucleoprotein G [Plasmodium cynomolgi strain B]
Length = 83
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +QV L G RQ+ G L+GYD +NLVLD VE +K +Q +G+
Sbjct: 13 DFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVE--------IKKEEQI-DIGI 63
Query: 102 IVCRGTAVMLVSPTDGTD 119
+V RG ++ D D
Sbjct: 64 VVIRGNSISYWECLDRVD 81
>gi|328350067|emb|CCA36467.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris CBS
7435]
Length = 199
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 22 SFNLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
SF F +S MS + L++ K +D+ V VKL G R++ G L YD NLVL +AV
Sbjct: 105 SFTHHFHRSTAMSVSEP--LNMIKLCLDEKVYVKLRGAREIVGKLHAYDNHCNLVLGDAV 162
Query: 81 EFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVS 113
E + D+ + QT+ ++ RG +V+LV+
Sbjct: 163 ETISTVDENNELKTQTKDRPMVYLRGDSVILVA 195
>gi|432864568|ref|XP_004070353.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oryzias latipes]
Length = 76
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVMDDCLE--------MGPGGQQNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|221220698|gb|ACM09010.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|221221936|gb|ACM09629.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGRQV G L+G+D +NLV+D+ +E A ++ T +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEM---APGGIQNT-----IGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|320591988|gb|EFX04427.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 86
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE +D + +K +G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE-KDGGEKVK-------IGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++++ +
Sbjct: 59 VVIRGNSIVMLEALE 73
>gi|183234630|ref|XP_648790.2| LSM domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|169800985|gb|EAL43403.2| LSM domain containing protein [Entamoeba histolytica HM-1:IMSS]
Length = 91
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD--PLKT 92
R T+ DL +++K V V+ G+++ G L+ YD NL L A++ + + D LKT
Sbjct: 5 NRYTTLSDLGSYIEKEVIVQFNDGKEIEGILQNYDDRFNLFLTNAIQHINENDKNTSLKT 64
Query: 93 TDQTRQLGLIVCRGTAVMLVSPTDG 117
T R+LG + C+G++V+ ++ +G
Sbjct: 65 T---RKLGEVFCKGSSVLELTLKEG 86
>gi|367030948|ref|XP_003664757.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila ATCC
42464]
gi|347012028|gb|AEO59512.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila ATCC
42464]
Length = 83
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KDNGEKVKLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|71296893|gb|AAH35103.1| SNRPG protein [Homo sapiens]
gi|74177547|dbj|BAE43250.1| unnamed protein product [Mus musculus]
gi|149036609|gb|EDL91227.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036612|gb|EDL91230.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036613|gb|EDL91231.1| rCG56468, isoform CRA_a [Rattus norvegicus]
Length = 64
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V RG
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRG 52
Query: 107 TAVMLVSPTD 116
+++++ +
Sbjct: 53 NSIIMLEALE 62
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis ATCC
18188]
Length = 78
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD +N+VLDEAVE K + +LG+
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDEAVEE--------KNGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|156085737|ref|XP_001610278.1| small nuclear ribonucleoprotein G [Babesia bovis T2Bo]
gi|154797530|gb|EDO06710.1| small nuclear ribonucleoprotein G, putative [Babesia bovis]
Length = 80
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL ++++K + V LTG R V G L+GYD +N+VLD A++ D +QTR LG+
Sbjct: 10 DLRRYMEKRLDVHLTGSRHVVGVLRGYDTFMNVVLDNALQIEGD--------EQTR-LGM 60
Query: 102 IVCRGTAVMLVSPTD 116
+V RG A++ D
Sbjct: 61 VVIRGNAIVYWECLD 75
>gi|452825043|gb|EME32042.1| small nuclear ribonucleoprotein G [Galdieria sulphuraria]
Length = 76
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D+ + +D+ V V+L G R+V G L+GYDQ +N+VL++ VE L +D +++G
Sbjct: 7 DMKRLMDRKVSVQLNGNRKVEGVLRGYDQFMNIVLEDCVEKLGPMND--------KEIGT 58
Query: 102 IVCRGTAVMLVS 113
+V RG +V ++
Sbjct: 59 VVVRGNSVFILE 70
>gi|260947516|ref|XP_002618055.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
gi|238847927|gb|EEQ37391.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
Length = 130
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 24 NLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
N + +++ ++E LDL ++ +D+ V VKL G R++ G L+GYD N+VL +A E
Sbjct: 39 NFILMSNIQTGAQQEEPLDLIRYQLDESVLVKLRGAREMKGKLQGYDSHCNMVLSDAQET 98
Query: 83 L---RDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
+ + D +K T+ ++ RG +V+L+SP++
Sbjct: 99 IYGENEEDTVVKKTE------MVFVRGDSVILISPSE 129
>gi|284413736|ref|NP_001165120.1| small nuclear ribonucleoprotein polypeptide G [Xenopus (Silurana)
tropicalis]
gi|138519693|gb|AAI35835.1| LOC100125174 protein [Xenopus (Silurana) tropicalis]
Length = 76
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE E + +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECTE--------ISGGGHQNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|154283627|ref|XP_001542609.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|150410789|gb|EDN06177.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|225561938|gb|EEH10218.1| hypothetical protein HCBG_01863 [Ajellomyces capsulatus G186AR]
gi|240275552|gb|EER39066.1| hypothetical protein HCDG_07010 [Ajellomyces capsulatus H143]
gi|325091383|gb|EGC44693.1| hypothetical protein HCEG_03908 [Ajellomyces capsulatus H88]
Length = 78
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD +N+V+DEAVE K+ + +LG+
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVMDEAVEE--------KSGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|66363098|ref|XP_628515.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46229816|gb|EAK90634.1| hypothetical protein cgd7_3520 [Cryptosporidium parvum Iowa II]
Length = 73
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
S + +++L L KF +K ++VKL GGR+V G L+G+D + NLVLDE VE++
Sbjct: 11 SFNIEMSSKSILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVEYM 64
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLVLD+A E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVLDDATE 47
>gi|225679289|gb|EEH17573.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 78
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE K+ + +LG+
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEE--------KSGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|116182940|ref|XP_001221319.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186395|gb|EAQ93863.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 83
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVLGVLRGYDVFLNIVLDDAVEE--------KDNGEKVKLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 95
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +VD V + LT GR + GTL+GYDQ N+VL E+VE + AD + QLGL
Sbjct: 4 LQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEA----QLGLY 59
Query: 103 VCRGTAVMLVSPTDGTDEIANPF 125
+ +G + L+ D + A P
Sbjct: 60 LVKGDTIALIGELDEAMDKAVPL 82
>gi|327291504|ref|XP_003230461.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial [Anolis
carolinensis]
Length = 65
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCR 105
F+DK + +KL GGR V G L+G+D +NLV+DE VE + Q +G++V R
Sbjct: 1 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MAPGGQQNNIGMVVIR 52
Query: 106 GTAVMLVSPTD 116
G +++++ +
Sbjct: 53 GNSIIMLEALE 63
>gi|295665420|ref|XP_002793261.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278175|gb|EEH33741.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 78
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE K+ + +LG+
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEE--------KSGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|348540852|ref|XP_003457901.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oreochromis
niloticus]
Length = 76
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E + Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDCLE--------MGPGGQQNTIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +++++
Sbjct: 60 VVIRGNSIIMLE 71
>gi|449067225|ref|YP_007434307.1| hypothetical protein SacN8_05970 [Sulfolobus acidocaldarius N8]
gi|449069496|ref|YP_007436577.1| hypothetical protein SacRon12I_05965 [Sulfolobus acidocaldarius
Ron12/I]
gi|449035733|gb|AGE71159.1| hypothetical protein SacN8_05970 [Sulfolobus acidocaldarius N8]
gi|449038004|gb|AGE73429.1| hypothetical protein SacRon12I_05965 [Sulfolobus acidocaldarius
Ron12/I]
Length = 73
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + V VKL G + V GTLK YD +NLVL+ + E + D TR++G I
Sbjct: 9 LAESLGSTVLVKLKGEKIVRGTLKSYDMHMNLVLENSEEIMNDG--------STRKVGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+LVSP
Sbjct: 61 VIRGDNVILVSP 72
>gi|366997500|ref|XP_003678512.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS 4309]
gi|342304384|emb|CCC72174.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS 4309]
Length = 84
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTDQ 95
ET LDL K +D+ V VKL G R +TGTL+ +D N+VL +AVE + + +D LK+T+
Sbjct: 4 ETPLDLLKLNLDEKVYVKLRGARSLTGTLQAFDSHCNIVLSDAVETIYELEDGDLKSTE- 62
Query: 96 TRQLGLIVCRGTAVMLVS 113
RQ +I RG V L++
Sbjct: 63 -RQSEMIFVRGDTVTLIT 79
>gi|344231234|gb|EGV63116.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 88
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 10/83 (12%)
Query: 36 RKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--RDADDPL-K 91
++E LDL ++ +D+ V VKL G R++ G L+GYD N+VL +A E++ + D P K
Sbjct: 9 KQEEPLDLIRYQLDETVLVKLRGAREMKGKLQGYDSHCNMVLSDATEYIYAENQDKPQGK 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSP 114
+TD ++ RG +V+L+SP
Sbjct: 69 STD------MVFIRGDSVILISP 85
>gi|300123719|emb|CBK24991.2| unnamed protein product [Blastocystis hominis]
Length = 77
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
KE ++LA ++ K V VKL G R V G L+GYDQ++N+VL++ E + + ++
Sbjct: 3 KEINVNLANYMGKVVTVKLNGNRIVEGVLRGYDQMMNIVLEDVYEVVNE--------NEK 54
Query: 97 RQLGLIVCRGTAVM 110
+++G +V RG ++
Sbjct: 55 QEMGRVVIRGNGII 68
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+V+D+AVE +D + +K LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVMDDAVEE-KDGGEKVK-------LGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|226291004|gb|EEH46432.1| small nuclear ribonucleoprotein SmG [Paracoccidioides brasiliensis
Pb18]
Length = 79
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE K+ + +LG+
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEE--------KSGGEKVRLGM 58
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 59 VVIRGNSVVMLE 70
>gi|429327915|gb|AFZ79675.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 81
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
G K DL +F++K + V L G R V G L+GYD +N+VLD A+E + D
Sbjct: 3 GGGKAGSADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGD-------- 54
Query: 94 DQTRQLGLIVCRGTAVMLVSPTD 116
DQ LG++V RG +++ D
Sbjct: 55 DQI-DLGIVVLRGNSIIYWECLD 76
>gi|70606993|ref|YP_255863.1| hypothetical protein Saci_1224 [Sulfolobus acidocaldarius DSM 639]
gi|68567641|gb|AAY80570.1| hypothetical protein Saci_1224 [Sulfolobus acidocaldarius DSM 639]
Length = 79
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + V VKL G + V GTLK YD +NLVL+ + E + D TR++G I
Sbjct: 15 LAESLGSTVLVKLKGEKIVRGTLKSYDMHMNLVLENSEEIMNDG--------STRKVGTI 66
Query: 103 VCRGTAVMLVSP 114
V RG V+LVSP
Sbjct: 67 VIRGDNVILVSP 78
>gi|312385157|gb|EFR29724.1| hypothetical protein AND_23652 [Anopheles darlingi]
Length = 64
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 10/71 (14%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTR-QLGLIVCR 105
+DK + +KL GGR V+G L+G+D +N+VLDE++E + D TR +G++V R
Sbjct: 1 MDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIE---------ECKDGTRNNIGMVVIR 51
Query: 106 GTAVMLVSPTD 116
G +++LV D
Sbjct: 52 GNSIILVEALD 62
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEE--------KAGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
V RG +V+++ +
Sbjct: 59 CVIRGNSVVMLEALE 73
>gi|354482503|ref|XP_003503437.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344245943|gb|EGW02047.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L KF+DK + +KL GGR V G L+G++ +NLV+DE VE + T+ +G++
Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFNPFMNLVIDECVE--------MATSGPQNNIGMV 60
Query: 103 VCRGTAVMLV 112
V +G + +++
Sbjct: 61 VIQGNSSIML 70
>gi|213404670|ref|XP_002173107.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
gi|212001154|gb|EEB06814.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
Length = 77
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K DL K++DK V V+L G R+V G L+GYD LN+V+++A E K+T +
Sbjct: 3 KAAAPDLKKYLDKQVFVQLNGSRKVYGVLRGYDIFLNIVVEDAYE--------EKSTGEK 54
Query: 97 RQLGLIVCRGTAVMLVSPTD 116
+G RG +V+++ D
Sbjct: 55 APIGSAAIRGNSVIMIEALD 74
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V V+L G R+V G L+GYD LN+VLD+A+E + + ++G+
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDDALEEV--------AGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG AV+++ D ++
Sbjct: 59 VVIRGNAVVMLEALDRINQ 77
>gi|385805901|ref|YP_005842299.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
gi|383795764|gb|AFH42847.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
Length = 76
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ + + V VKL G ++V G LK YD LN+VL++A E D Q R+LG +
Sbjct: 9 LSSSMGQTVLVKLKGNKEVRGKLKSYDHHLNIVLEDAEELFPDG--------QARKLGTV 60
Query: 103 VCRGTAVMLVSP 114
+ RG V+++SP
Sbjct: 61 IIRGDNVIIISP 72
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KEGGEKVKIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + ++K V +KL G + + G L G+DQ +NL+LD+A E L D D + LG +
Sbjct: 10 LDESINKTVLIKLKGNKTIRGNLLGFDQHMNLLLDQAEEILSDGD--------SNSLGSL 61
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 62 VVRGDNVVMISP 73
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+D+ + + L GGRQ++G L+GYD LNLV+D A E L Q + G+
Sbjct: 8 ELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDNAFEEL--------GGGQRKPCGM 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|149744765|ref|XP_001500582.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus caballus]
Length = 76
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLHGGRHVQGILWGFDPFVNLVIDECVE--------MTTSGQQNNIGM 59
Query: 102 IVCRGTAVMLVS 113
+V + ++++
Sbjct: 60 VVIQRNGIIMLE 71
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+D+ + + L GGRQ++G L+GYD LNLV+D A E L Q + G+
Sbjct: 8 ELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEEL--------GGGQRKPCGM 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|402226213|gb|EJU06273.1| like-Sm ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 77
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + V + GGR+V+G L+GYD LNLV+D+AVE T + +G
Sbjct: 8 ELKKFMDKRLFVYIQGGRRVSGVLRGYDIFLNLVVDDAVE--------ESGTSGKKHIGQ 59
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 60 VVIRGNSV 67
>gi|70944596|ref|XP_742213.1| small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56521062|emb|CAH84531.1| small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 83
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +Q+ L G R + G L+GYD +NLVLD VE + D+ ++G+
Sbjct: 13 DFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKK---------DENIEIGI 63
Query: 102 IVCRGTAV 109
+V RG ++
Sbjct: 64 VVIRGNSI 71
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KDGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|82793460|ref|XP_728048.1| small nuclear ribonucleoprotein polypeptide G [Plasmodium yoelii
yoelii 17XNL]
gi|23484203|gb|EAA19613.1| putative small nuclear ribonucleoprotein polypeptide G [Plasmodium
yoelii yoelii]
Length = 83
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +Q+ L G R + G L+GYD +NLVLD VE + D+ ++G+
Sbjct: 13 DFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKK---------DENIEIGI 63
Query: 102 IVCRGTAV 109
+V RG ++
Sbjct: 64 VVIRGNSI 71
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KEGGEKVKIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|124512338|ref|XP_001349302.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23499071|emb|CAD51151.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 83
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +Q+ L G RQV G L+GYD +NLVLD +E + D+ +G+
Sbjct: 13 DFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKK---------DEQIDIGV 63
Query: 102 IVCRGTAV 109
+V RG ++
Sbjct: 64 VVIRGNSI 71
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
V +L +++DK +++KL G R V G L+G+DQ LNLVLDEA + +P
Sbjct: 4 AVPELKQYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDEAHNDVGPDKEP--------- 54
Query: 99 LGLIVCRGTAV 109
LG++V RG +V
Sbjct: 55 LGMVVVRGNSV 65
>gi|303276466|ref|XP_003057527.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461879|gb|EEH59172.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 77
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 9/65 (13%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+++DK +++KL G R V G L+G+DQ LNLVLDE V DD +T LG++V
Sbjct: 5 RYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDECV------DD---STSDKEPLGMVVV 55
Query: 105 RGTAV 109
RG ++
Sbjct: 56 RGNSI 60
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ ++ V VKL G ++V GTL+ YDQ +NLVL ++ E D ++LG I
Sbjct: 9 LAESLNNLVLVKLKGNKEVRGTLRSYDQHMNLVLSDSEEIQSDGSG--------KKLGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDNVILISP 72
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma FGSC
2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE +D + +K LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE-KDGGEKVK-------LGM 58
Query: 102 IVCRGTAVMLVSPTD--GTDE 120
+ RG +V+++ + G DE
Sbjct: 59 VTIRGNSVVMMEALERIGGDE 79
>gi|14318502|ref|NP_116636.1| Smx2p [Saccharomyces cerevisiae S288c]
gi|730760|sp|P40204.1|RUXG_YEAST RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|499706|gb|AAB63977.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae]
gi|559938|emb|CAA86353.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270816|gb|AAS56789.1| YFL017W-A [Saccharomyces cerevisiae]
gi|285811877|tpg|DAA12422.1| TPA: Smx2p [Saccharomyces cerevisiae S288c]
Length = 77
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + + G R+V G L+GYD LN+VLD+A+E + +DP QLGL
Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI--NGEDPA----NNHQLGL 59
Query: 102 -IVCRGTAVMLVSPTDG 117
V RG +++ + D
Sbjct: 60 QTVIRGNSIISLEALDA 76
>gi|15920992|ref|NP_376661.1| small nuclear ribonucleoprotein [Sulfolobus tokodaii str. 7]
gi|342306290|dbj|BAK54379.1| archaeal Sm protein [Sulfolobus tokodaii str. 7]
Length = 79
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + V VKL G + V GTLK YD +NLVL+ + E + D TR++G I
Sbjct: 13 LAESLGSTVLVKLKGDKIVRGTLKSYDMHMNLVLENSEEVMSDG--------STRKVGTI 64
Query: 103 VCRGTAVMLVSP 114
+ RG V+LVSP
Sbjct: 65 IIRGDNVILVSP 76
>gi|351714344|gb|EHB17263.1| Small nuclear ribonucleoprotein G, partial [Heterocephalus glaber]
Length = 60
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 I 102
+
Sbjct: 60 V 60
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K +DK + +KL G R V G L+G+D +N+ L + VE + + + ++G+
Sbjct: 10 DLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVV--------SPTEKYEIGM 61
Query: 102 IVCRGTAVMLVSPTD 116
++ RG +++L+ P +
Sbjct: 62 VIIRGNSILLMEPLE 76
>gi|395731711|ref|XP_003775950.1| PREDICTED: small nuclear ribonucleoprotein G [Pongo abelii]
Length = 96
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 I 102
+
Sbjct: 60 V 60
>gi|68069273|ref|XP_676547.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56496296|emb|CAH97122.1| small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 83
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
D KF++K +Q+ L G R + G L+GYD +NLVLD +E + D+ ++G+
Sbjct: 13 DFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTIEIKK---------DENIEIGI 63
Query: 102 IVCRGTAV 109
+V RG ++
Sbjct: 64 VVIRGNSI 71
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K +DK + VKL G R V G L+G+D +N+VL + VE + + +G+
Sbjct: 10 DLTKLLDKKMNVKLNGNRTVIGILRGFDSFMNIVLKDTVE--------VTYPQEQINMGM 61
Query: 102 IVCRGTAVMLVSPTDG 117
+V RG +++++ P +
Sbjct: 62 VVIRGNSIVMMEPLEA 77
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELKKYLDKRLFVQLNGTRKVIGILRGYDVFLNIVLDDAVEE--------KDGGEKVRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K++DK +Q+ L R + GTL+G+DQ +NLV+D VE ++ +G++
Sbjct: 10 LKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVEV---------NGNEKNDIGMV 60
Query: 103 VCRGTAVMLVS 113
V RG +V+ V
Sbjct: 61 VIRGNSVVTVE 71
>gi|342883326|gb|EGU83840.1| hypothetical protein FOXB_05622 [Fusarium oxysporum Fo5176]
Length = 93
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQ--LLNLVLDEAVEFLRDADDPLKTTD 94
K+ LDL ++DK + V+L G R+V G L+GYD+ LN+VLDEAVE K
Sbjct: 9 KKASLDLFCYLDKRLFVQLNGSRKVIGILRGYDKQVFLNIVLDEAVEE--------KDGG 60
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
+ ++G++V RG +V+++ +
Sbjct: 61 EKERIGMVVIRGNSVVMLEALE 82
>gi|290989375|ref|XP_002677313.1| predicted protein [Naegleria gruberi]
gi|284090920|gb|EFC44569.1| predicted protein [Naegleria gruberi]
Length = 95
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ---- 95
LDL + +D+ V +KL G R++ GTL YDQ LN+VL E + + D +T +Q
Sbjct: 10 LDLIRLSLDEQVYIKLKGDRELRGTLHAYDQHLNMVLGNVEETIHEIDIDKETNEQQMKS 69
Query: 96 -TRQLGLIVCRGTAVMLV 112
TR++G++ RG V+LV
Sbjct: 70 TTRKIGMLFLRGDGVILV 87
>gi|241594929|ref|XP_002404416.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
gi|215500409|gb|EEC09903.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
Length = 76
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
++++DK + ++L G R +TG L+G+D +NLVLDE VE + + +G++
Sbjct: 8 FSRYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGG--------EKHDIGMV 59
Query: 103 VCRGTAVMLVSPTD 116
V RG +++L+ D
Sbjct: 60 VVRGNSIVLLESQD 73
>gi|440640051|gb|ELR09970.1| small nuclear ribonucleoprotein G [Geomyces destructans 20631-21]
Length = 83
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE K + ++G+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEE--------KDGGEKVRIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+A E + ++TR LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFE-------ETEGGNKTR-LGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEAME 73
>gi|299117056|emb|CBN73827.1| small nuclear ribonucleoprotein polypeptide G [Ectocarpus
siliculosus]
Length = 75
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 10/69 (14%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +++DK + +KL G R V G L+GYD +NLVLDE DP +++G+
Sbjct: 7 DLKRYMDKTLSLKLNGNRTVKGVLRGYDPFMNLVLDETT-------DP---ASSDKKMGM 56
Query: 102 IVCRGTAVM 110
++ RG +V+
Sbjct: 57 VIIRGNSVV 65
>gi|355565765|gb|EHH22194.1| hypothetical protein EGK_05417, partial [Macaca mulatta]
Length = 95
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 59
Query: 102 I 102
+
Sbjct: 60 V 60
>gi|378732523|gb|EHY58982.1| small nuclear ribonucleoprotein G [Exophiala dermatitidis
NIH/UT8656]
Length = 80
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD LN+VLD+AVE K + +LG+
Sbjct: 7 ELRKYMEKRLFVQLNGNRKVIGVLRGYDVFLNIVLDDAVEE--------KAGGERERLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+ RG +V+++ +
Sbjct: 59 VAIRGNSVVMLEALE 73
>gi|403170432|ref|XP_003329769.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168717|gb|EFP85350.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 78
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + L G R+++G L+G+D LNLVLDEA E + L+ ++ R++GL
Sbjct: 8 ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQE------ESLEGGEK-RKMGL 60
Query: 102 IVCRGTAV 109
IV RG +V
Sbjct: 61 IVIRGNSV 68
>gi|157870915|ref|XP_001684007.1| putative Lsm7p protein [Leishmania major strain Friedlin]
gi|68127075|emb|CAJ04433.1| putative Lsm7p protein [Leishmania major strain Friedlin]
Length = 91
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L K++D+ + V G +V G LKG+D +NLVL +A + RD
Sbjct: 11 KKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRDT--------H 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R++G V RG V L+ D T I NPF+
Sbjct: 62 VRKIGACVVRGGPVNLILSGD-TTMIPNPFI 91
>gi|440907817|gb|ELR57914.1| hypothetical protein M91_09610 [Bos grunniens mutus]
Length = 247
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
VKL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V RG +++++
Sbjct: 190 VKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNSIIML 241
>gi|395841395|ref|XP_003793525.1| PREDICTED: uncharacterized protein LOC100954411 [Otolemur
garnettii]
Length = 186
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K + + VKL GGR V G L+G+D +NLV+DE VE + T+ Q +G++
Sbjct: 119 LLKLLFPFIIVKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMV 170
Query: 103 VCRGTAVMLV 112
V RG +++++
Sbjct: 171 VIRGNSIIML 180
>gi|167381115|ref|XP_001735580.1| 60S ribosomal protein L7 [Entamoeba dispar SAW760]
gi|165902378|gb|EDR28228.1| 60S ribosomal protein L7, putative [Entamoeba dispar SAW760]
Length = 323
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD 94
R T+ DL +++K V V+ G+++ G L+ YD NL L A + + + ++P +
Sbjct: 5 NRYTTLSDLGSYIEKEVIVQFNDGKEIEGVLQNYDDRFNLFLTNATQHINE-NEPSVSIK 63
Query: 95 QTRQLGLIVCRGTAVM 110
TR+LG + C+G++V+
Sbjct: 64 TTRKLGDVFCKGSSVL 79
>gi|302831688|ref|XP_002947409.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
gi|300267273|gb|EFJ51457.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
Length = 74
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +F+DK + + L R V+GTL+G+DQ +N+VLD+ V D+ LK +G+
Sbjct: 8 ELKRFMDKKLSIHLNANRHVSGTLRGFDQFMNVVLDQTV------DEKLKV-----DIGM 56
Query: 102 IVCRGTAVMLVS 113
+V RG ++ +
Sbjct: 57 VVIRGNSIQTIE 68
>gi|389629744|ref|XP_003712525.1| hypothetical protein MGG_16841 [Magnaporthe oryzae 70-15]
gi|351644857|gb|EHA52718.1| hypothetical protein MGG_16841 [Magnaporthe oryzae 70-15]
gi|440488450|gb|ELQ68177.1| hypothetical protein OOW_P131scaffold00266g63 [Magnaporthe oryzae
P131]
Length = 95
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD--EAVEFLRDADDPLKTTDQTRQLGLIV 103
+D+ V VKL G R++ G L YD NLVL E +++D DD + +R+L ++
Sbjct: 19 LLDEVVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETHYIQDEDDESELKTVSRKLEMLF 78
Query: 104 CRGTAVMLVSPTD 116
RG +V+++SP+D
Sbjct: 79 VRGDSVVMISPSD 91
>gi|410671979|ref|YP_006924350.1| Small nuclear ribonucleoprotein, LSM family [Methanolobus
psychrophilus R15]
gi|409171107|gb|AFV24982.1| Small nuclear ribonucleoprotein, LSM family [Methanolobus
psychrophilus R15]
Length = 72
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V V+L G R+ G L+GYD +NLVLDEA E LK D R+LG +V RG ++
Sbjct: 17 VIVRLKGAREFRGKLQGYDVHMNLVLDEAEE--------LKEGDIVRKLGSVVIRGDNIV 68
Query: 111 LVSP 114
VSP
Sbjct: 69 YVSP 72
>gi|308810487|ref|XP_003082552.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
gi|116061021|emb|CAL56409.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
Length = 101
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+++DK ++++L G R VTG L+G+DQ LNLVLD++ TT + +G++V
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTN---------DTTTEKTPMGMVVV 79
Query: 105 RGTAVM 110
RG +V+
Sbjct: 80 RGNSVV 85
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE K + LG+
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGVLRGYDVFMNIVLDDAVEE--------KNGGEKVPLGM 58
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 59 VVIRGNSVVMLE 70
>gi|302310596|ref|XP_453405.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425041|emb|CAH00501.2| KLLA0D07678p [Kluyveromyces lactis]
Length = 73
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++DK + ++L G R++ G L+GYD LNLVLD ++ + + ++ QT
Sbjct: 5 DLRKYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGE--VQMGPQT----- 57
Query: 102 IVCRGTAVMLVSPTD 116
V RG +++ + P D
Sbjct: 58 -VVRGNSIVSIEPLD 71
>gi|294495046|ref|YP_003541539.1| Small nuclear ribonucleoprotein, LSM family [Methanohalophilus
mahii DSM 5219]
gi|292666045|gb|ADE35894.1| Small nuclear ribonucleoprotein, LSM family [Methanohalophilus
mahii DSM 5219]
Length = 72
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++ V V+L G R+ GTL+GYD +NLVLDEA E +K + R++G +
Sbjct: 9 LNNALNTAVIVRLKGAREFRGTLQGYDVHMNLVLDEAEE--------IKEGEIIRKIGSV 60
Query: 103 VCRGTAVMLVSP 114
V RG V+ VSP
Sbjct: 61 VVRGDNVVYVSP 72
>gi|238880144|gb|EEQ43782.1| hypothetical protein CAWG_02031 [Candida albicans WO-1]
Length = 96
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRDADDPLKTTDQ-- 95
LDL +F +D+ V VKL G R++ G L+GYD N+VL +A E + + DD + T +
Sbjct: 15 LDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAEETIYTSNEDDDSENTSEEP 74
Query: 96 -TRQLGLIVCRGTAVMLVSP 114
++ ++ RG +V+L+SP
Sbjct: 75 IVKKTAMVFVRGDSVILISP 94
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella moellendorffii]
Length = 81
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++D + +KL R V G L+G+DQ +NLVLD +E + ++ ++G+
Sbjct: 9 DLKKYMDLKLMIKLNANRVVVGVLRGFDQFMNLVLDNTMEI---------SGNERTEIGM 59
Query: 102 IVCRGTAVMLVS 113
+V RG +V ++
Sbjct: 60 VVIRGNSVAMIE 71
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative (AFU_orthologue;
AFUA_8G04960) [Aspergillus nidulans FGSC A4]
Length = 78
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCELNGNRKVIGVLRGYDVFMNIVLDEAFE--------EKPGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
IV RG +V+++ + E
Sbjct: 59 IVIRGNSVVMLEALERISE 77
>gi|393246263|gb|EJD53772.1| LSM-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 100
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 8/67 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
A+F+DK + V + GGR+V+GTL+G+D LNLVLD+A +D P Q LG +
Sbjct: 32 FAQFMDKKLFVHIQGGRKVSGTLRGFDIFLNLVLDDA----QDESVPA----QKAPLGTV 83
Query: 103 VCRGTAV 109
V RG +V
Sbjct: 84 VIRGNSV 90
>gi|219129945|ref|XP_002185137.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403316|gb|EEC43269.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTD-- 94
E LDL + +D+ V VK G R++ G L GYDQ LN++L + E + + +T +
Sbjct: 2 EEPLDLIRLSIDERVYVKCRGDRELRGKLHGYDQHLNMILGDVEETVTSTEIDEETDEQI 61
Query: 95 ---QTRQLGLIVCRGTAVMLVSP 114
QTR++G++ RG V+LVSP
Sbjct: 62 VKKQTRKVGMLFVRGDIVVLVSP 84
>gi|429216595|ref|YP_007174585.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM 15908]
gi|429133124|gb|AFZ70136.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM 15908]
Length = 79
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
+A +++ V VK+ G R+V G L YDQ LNL+L++A E +R LGL+
Sbjct: 15 MADYLNSSVLVKMKGNREVKGILTSYDQHLNLILEKAEEL---------EGKVSRPLGLV 65
Query: 103 VCRGTAVMLVSPT 115
+ RG V+ VSP
Sbjct: 66 LLRGDNVIAVSPA 78
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +F++K + V L G R V G L+GYD +N+VLD A+E + ++ LG+
Sbjct: 12 DLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVV---------GEEQVDLGV 62
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++ D
Sbjct: 63 VVVRGNSILYWECLD 77
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK +Q+KL R VTGTL+G+DQ +NLV+D VE + D+T +G++V RG
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGMVVIRG 51
Query: 107 TAVMLV 112
+++ V
Sbjct: 52 NSIVTV 57
>gi|332253185|ref|XP_003275727.1| PREDICTED: small nuclear ribonucleoprotein G-like [Nomascus
leucogenys]
Length = 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+DK + +KL GR V G L+G+D +NLV+DE VE + T+ Q +G+
Sbjct: 21 ELKKFMDKKLSLKLNDGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGM 72
Query: 102 IVCRGTAVMLVS 113
+ G +++++
Sbjct: 73 VKILGDSIIVLE 84
>gi|430813244|emb|CCJ29390.1| unnamed protein product [Pneumocystis jirovecii]
Length = 76
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V + L G R+V G L+GYD LN+VLDEA E K + +G
Sbjct: 8 ELKKYMDKKVFLMLNGSRKVIGVLRGYDVFLNIVLDEAFE--------EKEGGEKCAIGT 59
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V++V +
Sbjct: 60 VVIRGNSVVMVEALE 74
>gi|19113214|ref|NP_596422.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe 972h-]
gi|6094213|sp|O74966.1|RUXG_SCHPO RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|3169092|emb|CAA19285.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe]
Length = 77
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL K++D+ V V+L G R+V G L+GYD LN+VL++++E K + ++G
Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE--------EKVDGEKVKIGS 59
Query: 102 IVCRGTAVMLVSPTD 116
+ RG +V+++ D
Sbjct: 60 VAIRGNSVIMIETLD 74
>gi|148698069|gb|EDL30016.1| mCG121012 [Mus musculus]
Length = 90
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Query: 49 KGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTA 108
+ + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V RG +
Sbjct: 29 RKLSLKLNGGRHVQGILQGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNS 80
Query: 109 VMLV 112
++++
Sbjct: 81 IIML 84
>gi|159471089|ref|XP_001693689.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
gi|158283192|gb|EDP08943.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
Length = 77
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 11/72 (15%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +F+DK + + L R V+GTL+G+DQ +NLVLD V D+ LK +G+
Sbjct: 8 ELKRFMDKKLSITLNANRHVSGTLRGFDQFMNLVLDATV------DEKLKV-----DIGM 56
Query: 102 IVCRGTAVMLVS 113
+V RG ++ +
Sbjct: 57 VVIRGNSIQTIE 68
>gi|347522771|ref|YP_004780341.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
gi|343459653|gb|AEM38089.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
Length = 75
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V VKL G V G LK +DQ LNLVL+EA E +K+ TR+LG +V RG V+
Sbjct: 17 VLVKLRGDIVVRGKLKSFDQHLNLVLEEAEE--------IKSDGSTRKLGTLVIRGDNVV 68
Query: 111 LVSPT 115
L+SPT
Sbjct: 69 LISPT 73
>gi|242799446|ref|XP_002483380.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716725|gb|EED16146.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
Length = 77
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE + P D +LG+
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVE-----EKPDGGKD---RLGM 58
Query: 102 IVCRGTAVMLVS 113
+V RG +V+++
Sbjct: 59 VVIRGNSVVMLE 70
>gi|403222297|dbj|BAM40429.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 82
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL +F++K + V L G R V G L+GYD +N+VLD A+E + + +LG+
Sbjct: 12 DLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEG---------QVELGV 62
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +++ D
Sbjct: 63 VVVRGNSILYWECLD 77
>gi|366991963|ref|XP_003675747.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS 4309]
gi|342301612|emb|CCC69383.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS 4309]
Length = 76
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R+V G L+GYD LN+V+D+AVE +D QLG+
Sbjct: 6 ELKKYMDKKILLQLNGSRKVAGILRGYDIFLNVVVDDAVEVSKDG--------SKHQLGM 57
Query: 102 -IVCRGTAVMLVSPTD 116
V RG +++ + D
Sbjct: 58 QTVIRGNSIVSLEALD 73
>gi|148666747|gb|EDK99163.1| mCG130514, isoform CRA_c [Mus musculus]
gi|149036611|gb|EDL91229.1| rCG56468, isoform CRA_c [Rattus norvegicus]
Length = 58
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
+KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V RG +++++
Sbjct: 1 MKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVIRGNSIIML 52
Query: 113 SPTD 116
+
Sbjct: 53 EALE 56
>gi|367011365|ref|XP_003680183.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
gi|359747842|emb|CCE90972.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
Length = 76
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
+L ++VDK V +++ G R++ G L+GYD LN+VLD+AVE L+D +
Sbjct: 6 ELKRYVDKKVVLQVNGSRKLAGVLRGYDVFLNVVLDDAVELLKDGSN 52
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIV 103
A+F+D+ + + L GGRQ++G L+GYD LNLV+D A E L Q + G++V
Sbjct: 3 AEFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEEL--------GGGQRKPCGMVV 54
Query: 104 CRGTAV 109
RG +V
Sbjct: 55 IRGNSV 60
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 9/64 (14%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK ++++L G R V GTL+G+DQ LN+VLD+A TT + +G+IV RG
Sbjct: 1 MDKKLRLRLNGNRNVVGTLRGFDQFLNVVLDDATN---------DTTSEKTPMGMIVVRG 51
Query: 107 TAVM 110
+V+
Sbjct: 52 NSVV 55
>gi|146304997|ref|YP_001192313.1| Sm ribonucleoprotein-like protein [Metallosphaera sedula DSM 5348]
gi|145703247|gb|ABP96389.1| Small nuclear ribonucleoprotein, LSM family [Metallosphaera sedula
DSM 5348]
Length = 75
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ V V VKL G ++V G LK YDQ +NLVL ++ E D + +++G I
Sbjct: 9 LAESVGSLVLVKLKGNKEVRGLLKSYDQHMNLVLSDSEEIQSDGEG--------KKMGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDNVILISP 72
>gi|334349064|ref|XP_003342141.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
Length = 76
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K + +L KF+DK + +KL GGR + G L+G D +NLV DE VE + Q
Sbjct: 3 KAYLPELKKFMDKKLSLKLNGGRPIQGILRGSDLFMNLVADECVE--------MAPGGQQ 54
Query: 97 RQLGLIVCRGTAVMLVSPTD 116
+G++V +G +++++ +
Sbjct: 55 NNIGMVVIQGNSIIMLEALE 74
>gi|408404869|ref|YP_006862852.1| small nuclear ribonucleoprotein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365465|gb|AFU59195.1| putative small nuclear ribonucleoprotein [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 76
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
Query: 49 KGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTA 108
K V +KL GG+ + G L G+DQ +NL+L+++VE L + ++ LG IV RG
Sbjct: 16 KVVLIKLKGGKVIRGNLHGFDQHMNLLLEDSVEILEEG--------KSNDLGTIVVRGDN 67
Query: 109 VMLVSP 114
V+++SP
Sbjct: 68 VVIISP 73
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + L G R+++G L+G+D LNLVLDEA E + L+ ++ R++GL
Sbjct: 8 ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQE------ENLEGGEK-RKMGL 60
Query: 102 IVCRGTAV 109
+V RG +V
Sbjct: 61 VVIRGNSV 68
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFE--------EKQGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +V+++ + E
Sbjct: 59 VVIRGNSVVMLEALERISE 77
>gi|154343057|ref|XP_001567474.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064806|emb|CAM42912.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 82
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL A++ R+A+ + T
Sbjct: 4 NKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHNAMDETRNANGSDEGT--M 61
Query: 97 RQLGLIVCRGTAVMLVSPTD 116
LG V RG+AV+ ++ D
Sbjct: 62 TALGTTVIRGSAVVEITSAD 81
>gi|448535532|ref|XP_003870996.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis Co 90-125]
gi|380355352|emb|CCG24870.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis]
Length = 91
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 36 RKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RDADDPLK 91
+++ LDL +F +D+ V VKL G R+ G L+GYD NLVL +A E + +D DP+
Sbjct: 10 QQQEPLDLIRFQLDEYVIVKLRGAREFKGKLQGYDSHCNLVLSDATETIFSDKDGVDPI- 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSP 114
++ ++ RG +V+L+SP
Sbjct: 69 ----IKRTEMVFVRGDSVILISP 87
>gi|70994546|ref|XP_752051.1| small nuclear ribonucleoprotein SmB [Aspergillus fumigatus Af293]
gi|66849685|gb|EAL90013.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus
fumigatus Af293]
Length = 357
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--------- 84
GR++ D ++ +++ LT GRQ+TG + +D+ +NLVL + EF R
Sbjct: 118 HGRQQAGQDADTLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAA 177
Query: 85 -DADDPLKTTDQTRQLGLIVCRGTAVMLVS 113
++ PL ++ R LGL + RGT V+ S
Sbjct: 178 GPSNAPLVEAEEKRTLGLTIVRGTHVVSCS 207
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL + +DK + VKL G R V G L+G+D +N+ L + VE + + + ++G+
Sbjct: 10 DLTRLLDKKLNVKLNGNRTVQGILRGFDTFMNIALKDTVEVV--------SPTEKYEIGM 61
Query: 102 IVCRGTAVMLVSPTD 116
++ RG +++L+ P +
Sbjct: 62 VLIRGNSIILMEPLE 76
>gi|410730333|ref|XP_003671346.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS 421]
gi|401780164|emb|CCD26103.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS 421]
Length = 76
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R++ G L+GYD LN+V+D+AVE D QLG+
Sbjct: 6 ELKKYMDKKILIQLNGSRKIAGILRGYDIFLNVVIDDAVEVSADG--------SKHQLGI 57
Query: 102 -IVCRGTAVMLVSPTD 116
V RG +++ + D
Sbjct: 58 QTVIRGNSIVALEALD 73
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V+ V + GR + GTLKG+DQ +NL+LDE+ E + +D ++ LGL
Sbjct: 5 LEGYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSDHGVEQV----PLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V++V D
Sbjct: 61 IVRGDNVVVVGQVD 74
>gi|302348719|ref|YP_003816357.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
gi|302329131|gb|ADL19326.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
R T + ++++ V VKL GG V G LK +DQ LNLVL+ A E T
Sbjct: 7 RTNTFKVMNEYLNASVYVKLKGGEGVKGVLKSFDQHLNLVLENAEEL---------TERG 57
Query: 96 TRQLGLIVCRGTAVMLVSP 114
+R LG ++ RG +++ +SP
Sbjct: 58 SRSLGTVLVRGDSIVAISP 76
>gi|159125035|gb|EDP50152.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus
fumigatus A1163]
Length = 357
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---------- 84
GR++ D ++ +++ LT GRQ+TG + +D+ +NLVL + EF R
Sbjct: 119 GRQQAGQDADTLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAG 178
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVS 113
++ PL ++ R LGL + RGT V+ S
Sbjct: 179 PSNAPLVEAEEKRTLGLTIVRGTHVVSCS 207
>gi|167518686|ref|XP_001743683.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777645|gb|EDQ91261.1| predicted protein [Monosiga brevicollis MX1]
Length = 93
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 33 MSGRK-ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPL 90
M GR E LDL + +++ V VK+ G RQ+ GTL YDQ +N+VL VE L D
Sbjct: 1 MDGRSVEEPLDLVRLSLEEKVLVKMRGDRQLEGTLHAYDQHMNMVLSNVVETLATVDVDD 60
Query: 91 KTTDQ-----TRQLGLIVCRGTAVMLVSP 114
+T ++ R L ++ RG V+LV+P
Sbjct: 61 ETGEELVKTAKRVLPMLYVRGDGVILVAP 89
>gi|296421463|ref|XP_002840284.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636499|emb|CAZ84475.1| unnamed protein product [Tuber melanosporum]
Length = 76
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+A+E K + ++G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGILRGYDVFLNIVLDDAIEE--------KDGGEKVRIGT 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|212541212|ref|XP_002150761.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
gi|210068060|gb|EEA22152.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
Length = 77
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE K +LG+
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEE--------KADGGKDRLGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + ++L G R V+G L+G+D +N+VL+EA E ++ Q +G+
Sbjct: 8 ELKKYMDKSLSLRLNGSRVVSGILRGFDPFMNIVLEEAFEEVKGG--------QRTPIGM 59
Query: 102 IVCRGTAVMLV 112
V RG +++L+
Sbjct: 60 TVIRGNSIVLL 70
>gi|305662480|ref|YP_003858768.1| Sm ribonucleoprotein-like protein [Ignisphaera aggregans DSM 17230]
gi|304377049|gb|ADM26888.1| Like-Sm ribonucleoprotein core [Ignisphaera aggregans DSM 17230]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + + V +KL GG+ V G L+ YD LN+VLD+A E L D R+LG +
Sbjct: 14 LAESLGQMVLIKLRGGKSVRGKLRSYDLHLNIVLDDAEEELSDG--------SWRKLGTV 65
Query: 103 VCRGTAVMLVSP 114
+ RG V+++SP
Sbjct: 66 LIRGENVVVISP 77
>gi|119484532|ref|XP_001262045.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya fischeri
NRRL 181]
gi|121719811|ref|XP_001276604.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus clavatus
NRRL 1]
gi|119404816|gb|EAW15178.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus clavatus
NRRL 1]
gi|119410201|gb|EAW20148.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya fischeri
NRRL 181]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTDGTDE 120
+V RG +V+++ + E
Sbjct: 59 VVIRGNSVVMLEALERISE 77
>gi|378754992|gb|EHY65020.1| hypothetical protein NERG_02076 [Nematocida sp. 1 ERTm2]
Length = 114
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA--VEFLRDADDPLK 91
+ +++ V DL K+V K V++ GG +VTG L GYDQLLN+VL + F D L
Sbjct: 7 ASKRDQVFDLEKYVGKKVRICFFGGIEVTGCLLGYDQLLNIVLGDGKMASFSEQEDKSLD 66
Query: 92 TTDQTRQL-GLIVCRGTAVM---LVSPTDGTDEIANP 124
+ ++ ++C+G ++ L++ + +E A P
Sbjct: 67 LGELMQEAPSSMMCKGVSICSIDLMTAPESAEEYAYP 103
>gi|15897658|ref|NP_342263.1| small nuclear riboprotein (snRNP-2) [Sulfolobus solfataricus P2]
gi|13813927|gb|AAK41053.1| Small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus P2]
Length = 79
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E D ++LG I
Sbjct: 12 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSG--------KKLGTI 63
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 64 VIRGDNVILISP 75
>gi|118575248|ref|YP_874991.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
gi|118193769|gb|ABK76687.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
Length = 78
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + ++K V +KL GG+ + G L G+DQ +NL+L+ + E + +TR LG I
Sbjct: 10 LDESINKVVLIKLKGGKAIRGNLLGFDQHMNLLLESSEE--------IPVEGETRTLGTI 61
Query: 103 VCRGTAVMLVSPTDGT 118
V RG V+++SP T
Sbjct: 62 VVRGDNVVIISPPPAT 77
>gi|284174982|ref|ZP_06388951.1| small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus 98/2]
gi|384434272|ref|YP_005643630.1| Sm ribonucleoprotein-like protein [Sulfolobus solfataricus 98/2]
gi|261602426|gb|ACX92029.1| Like-Sm ribonucleoprotein core [Sulfolobus solfataricus 98/2]
Length = 76
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E D ++LG I
Sbjct: 9 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSG--------KKLGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDNVILISP 72
>gi|365991154|ref|XP_003672406.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS 421]
gi|343771181|emb|CCD27163.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS 421]
Length = 85
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
ET LDL K +D+ V VKL G R + GTL+ +D N+VL +A+E + + DD
Sbjct: 4 ETPLDLLKLNLDEQVYVKLRGARSLVGTLQAFDSHCNIVLSDAIETIYELDDEGDLQSVE 63
Query: 97 RQLGLIVCRGTAVMLVSPTD 116
R +I RG V L++ D
Sbjct: 64 RNSEMIFVRGDTVTLITTPD 83
>gi|317036310|ref|XP_001398084.2| small nuclear ribonucleoprotein G [Aspergillus niger CBS 513.88]
gi|358372686|dbj|GAA89288.1| small nuclear ribonucleoprotein SmG [Aspergillus kawachii IFO 4308]
Length = 78
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
IV RG +V+++ +
Sbjct: 59 IVIRGNSVVMLEALE 73
>gi|71041581|pdb|1TH7|A Chain A, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041582|pdb|1TH7|B Chain B, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041583|pdb|1TH7|C Chain C, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041584|pdb|1TH7|D Chain D, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041585|pdb|1TH7|E Chain E, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041586|pdb|1TH7|F Chain F, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041587|pdb|1TH7|G Chain G, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041588|pdb|1TH7|H Chain H, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041589|pdb|1TH7|I Chain I, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041590|pdb|1TH7|J Chain J, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041591|pdb|1TH7|K Chain K, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041592|pdb|1TH7|L Chain L, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041593|pdb|1TH7|M Chain M, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041594|pdb|1TH7|N Chain N, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
Length = 81
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E D ++LG I
Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSG--------KKLGTI 65
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 66 VIRGDNVILISP 77
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora larici-populina
98AG31]
Length = 124
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 48 DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGT 107
DK V V GR +TG LKG+DQ N++L E++E + AD+P++ LGL V RG
Sbjct: 38 DKRVLVITQDGRTITGDLKGFDQTTNIILSESIERVYSADEPMEEV----PLGLYVVRGD 93
Query: 108 AVMLVSPTD 116
+ ++ D
Sbjct: 94 HISVIGELD 102
>gi|440302928|gb|ELP95234.1| small nuclear ribonucleoprotein G, putative [Entamoeba invadens
IP1]
Length = 88
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +++K + VK+ R + G L+G+D+ LNLVLD+A DA P Q QLG
Sbjct: 14 ELKHYMEKRIYVKIHCNRAIIGVLRGFDEYLNLVLDDAF----DASHP--ENPQKIQLGQ 67
Query: 102 IVCRGTAVMLVSPTD 116
I+ RG +V+ + D
Sbjct: 68 ILIRGNSVLSLETVD 82
>gi|254565075|ref|XP_002489648.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238029444|emb|CAY67367.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
Length = 84
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQL 99
L++ K +D+ V VKL G R++ G L YD NLVL +AVE + D+ + QT+
Sbjct: 7 LNMIKLCLDEKVYVKLRGAREIVGKLHAYDNHCNLVLGDAVETISTVDENNELKTQTKDR 66
Query: 100 GLIVCRGTAVMLVS 113
++ RG +V+LV+
Sbjct: 67 PMVYLRGDSVILVA 80
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +D+ V +KL G + + GTL G+DQ +NL+LD + E + D ++ LG I
Sbjct: 6 LDESIDQVVLIKLKGSKTIRGTLLGFDQHMNLLLDSSEEIPAEGD--------SKSLGTI 57
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 58 VVRGDNVVMISP 69
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +VD+ V V + GR + GTLKG+DQ +NL+LDE+ E + + +K LGL
Sbjct: 5 LENYVDRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVKQV----VLGLY 60
Query: 103 VCRGTAVMLV----SPTDGTDEIANPFMQP 128
+ RG V ++ TD ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEETDSVLDLGNIRTEP 90
>gi|397600435|gb|EJK57654.1| hypothetical protein THAOC_22279 [Thalassiosira oceanica]
Length = 78
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
S + + DL +F+DK +++ L G R+V GTL+GYD LN+VL+EA+
Sbjct: 3 SSKHQKGPDLKRFMDKRLKLSLNGNRKVVGTLRGYDAFLNVVLEEAM 49
>gi|412986570|emb|CCO14996.1| predicted protein [Bathycoccus prasinos]
Length = 72
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK +++KL G R V G L+G+DQ LNLVLDE V +T + LG++V RG
Sbjct: 1 MDKKLKLKLNGNRGVIGILRGFDQFLNLVLDECVN---------DSTAEKTPLGMVVVRG 51
Query: 107 TAVM 110
+V+
Sbjct: 52 ASVL 55
>gi|259146173|emb|CAY79432.1| Smx2p [Saccharomyces cerevisiae EC1118]
Length = 77
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + + G R+V G L+GYD LN+VLD+A+E + +DP LGL
Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI--NGEDPA----NNHPLGL 59
Query: 102 -IVCRGTAVMLVSPTDG 117
V RG +++ + D
Sbjct: 60 QAVIRGNSIISLEALDA 76
>gi|392577844|gb|EIW70972.1| hypothetical protein TREMEDRAFT_67521 [Tremella mesenterica DSM
1558]
Length = 78
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L KF+D+ + + L GGR V+G L+GYD LNLV+D A E L + R +G
Sbjct: 8 ELKKFMDRKLYLHLQGGRAVSGILRGYDMFLNLVVDNAFEEL--------GGGKRRLIGT 59
Query: 102 IVCRGTAV 109
V RG +V
Sbjct: 60 TVIRGNSV 67
>gi|333986739|ref|YP_004519346.1| snRNP Sm-like protein [Methanobacterium sp. SWAN-1]
gi|333824883|gb|AEG17545.1| snRNP Sm-like protein [Methanobacterium sp. SWAN-1]
Length = 80
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++ V +KL GGR+ G L +D +NLVL++A E L++ + +R+LG++
Sbjct: 16 LGKSLNSQVLIKLKGGREFRGVLNSFDMHMNLVLNDAEE--------LESGESSRRLGVV 67
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 68 LIRGDNIVYISP 79
>gi|410077765|ref|XP_003956464.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS 2517]
gi|372463048|emb|CCF57329.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS 2517]
Length = 76
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-DADDPLKTTDQTRQLG 100
+L K++DK V +++ G R+V G L+GYD LN+VLD+A E + D++ PL + QT
Sbjct: 6 ELKKYMDKKVLLQINGSRKVAGILRGYDIFLNIVLDDAFELSKNDSNIPLGS--QT---- 59
Query: 101 LIVCRGTAVMLVSPTDGTD 119
V RG +++ + D +
Sbjct: 60 --VIRGNSIVAMEALDSIN 76
>gi|294945142|ref|XP_002784569.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
gi|239897680|gb|EER16365.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus ATCC
50983]
Length = 59
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 54 KLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVS 113
KL G R V G L+GYDQ +NLVLD AVE + + + + +G+ V RG +V++
Sbjct: 1 KLNGNRHVVGVLRGYDQFMNLVLDNAVELV--------SRTEKKDIGMTVIRGNSVLMWE 52
Query: 114 PTD 116
D
Sbjct: 53 CLD 55
>gi|254579134|ref|XP_002495553.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
gi|238938443|emb|CAR26620.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
Length = 85
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQTRQ 98
LDL K +D+ V VKL G R++TGTL+ +D N+VL +AVE + + D LK+T+++ +
Sbjct: 7 LDLLKLNLDERVYVKLRGARELTGTLQAFDSHCNIVLSDAVESIYELVDGELKSTEKSSE 66
Query: 99 LGLIVCRGTAVMLVSP 114
++ RG +V L++
Sbjct: 67 --MVFVRGDSVTLITA 80
>gi|151940745|gb|EDN59132.1| Sm G [Saccharomyces cerevisiae YJM789]
gi|190406555|gb|EDV09822.1| small nuclear ribonucleoprotein G [Saccharomyces cerevisiae
RM11-1a]
gi|256268877|gb|EEU04227.1| Smx2p [Saccharomyces cerevisiae JAY291]
gi|349577899|dbj|GAA23066.1| K7_Smx2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299654|gb|EIW10747.1| Smx2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 77
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + + G R+V G L+GYD LN+VLD+A+E + +DP LGL
Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI--NGEDPA----NNHPLGL 59
Query: 102 -IVCRGTAVMLVSPTDG 117
V RG +++ + D
Sbjct: 60 QTVIRGNSIISLEALDA 76
>gi|410080239|ref|XP_003957700.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS 2517]
gi|372464286|emb|CCF58565.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS 2517]
Length = 85
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T LDL K +D+ V VKL G R +TGTL+ +D N+VL +AVE + + D + + +
Sbjct: 3 DTPLDLLKLNLDETVYVKLRGARALTGTLQAFDSHCNIVLSDAVETIYELDGNGELSSKE 62
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDE 120
++ +I RG +V L++ T DE
Sbjct: 63 KKSEMIFVRGDSVTLIT-TPNADE 85
>gi|146096397|ref|XP_001467793.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|157873845|ref|XP_001685423.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|398020732|ref|XP_003863529.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
gi|68128495|emb|CAJ08627.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|134072159|emb|CAM70860.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|322501762|emb|CBZ36844.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
Length = 81
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL +A++ R+A +++
Sbjct: 4 HKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNA----AVSEEA 59
Query: 97 R-QLGLIVCRGTAVMLVSPTD 116
R LG V RG+A++ + D
Sbjct: 60 RLALGTTVIRGSAIVEIVSAD 80
>gi|443926894|gb|ELU45444.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 306
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + + L GGR+++G L+G+D LNLV+D+AVE
Sbjct: 3 KASQPELKKFMDKRLFIHLQGGRKISGVLRGFDIFLNLVVDDAVE 47
>gi|260786161|ref|XP_002588127.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
gi|229273285|gb|EEN44138.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
Length = 874
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
Query: 23 FNLGFLKSLKMSGRKETVLDLAKF-----VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
+ L F + SG + TVL +A V +V+L G R+V+G L+G+D +NLV+D
Sbjct: 782 YCLAFTYNGSSSGSQPTVLLMAVMWSCAAVKLAAEVQLNGNRKVSGILRGFDPFMNLVID 841
Query: 78 EAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
E VE LR ++ + +G++V RG +++++
Sbjct: 842 ECVE-LRG--------NERQSIGMVVIRGNSIIML 867
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFE--------EKQGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|254583570|ref|XP_002497353.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
gi|238940246|emb|CAR28420.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
Length = 76
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+L ++VDK V ++L G R+V G L+GYD LN+VLD+AVE +D
Sbjct: 6 ELKRYVDKKVLLQLNGARKVAGVLRGYDLFLNVVLDDAVEVGKDG 50
>gi|326427331|gb|EGD72901.1| small nuclear ribonucleoprotein G [Salpingoeca sp. ATCC 50818]
Length = 76
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +F+DK +++KL R+V+G L+G+D +N+V+D+ VE D + ++G+
Sbjct: 8 ELKRFLDKKLELKLNANRKVSGILRGFDPFMNIVMDQTVEHKPDGEQ--------VKIGV 59
Query: 102 IVCRGTAV 109
+V RG ++
Sbjct: 60 VVIRGNSI 67
>gi|154339089|ref|XP_001562225.1| putative Lsm7p protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062819|emb|CAM39264.1| putative Lsm7p protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 98
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L K++D+ V V G++V G LKG+D +NLVL +A + D
Sbjct: 18 KKEGILSLEKYLDRKVVVS-QKGQEVHGVLKGFDNNVNLVLADAELWHGDT--------H 68
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R +G V RG V ++ D T IANPF
Sbjct: 69 IRTIGACVVRGGPVSIILSGD-TTSIANPF 97
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 9/67 (13%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK +Q+K+ R V GTL+G+DQ +NLV+D VE + D+T +G++V RG
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGMVVIRG 51
Query: 107 TAVMLVS 113
+V+++
Sbjct: 52 NSVVMIE 58
>gi|241959048|ref|XP_002422243.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
gi|223645588|emb|CAX40247.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
Length = 96
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ- 98
LDL +F +D+ V VKL G R++ G L+GYD N+VL +A E + +++ + D +++
Sbjct: 15 LDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAQETIYTSNEGGDSEDSSKEP 74
Query: 99 ----LGLIVCRGTAVMLVSP 114
++ RG +V+L+SP
Sbjct: 75 IVKKTAMVFVRGDSVILISP 94
>gi|238483149|ref|XP_002372813.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
gi|317139686|ref|XP_001817686.2| small nuclear ribonucleoprotein G [Aspergillus oryzae RIB40]
gi|220700863|gb|EED57201.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
Length = 78
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K V +L G R+V G L+GYD +N+VLDEA E K + +G+
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQGGEKVAIGM 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|115473291|ref|NP_001060244.1| Os07g0608700 [Oryza sativa Japonica Group]
gi|113611780|dbj|BAF22158.1| Os07g0608700 [Oryza sativa Japonica Group]
Length = 67
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE 48
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA++VD V V GR + GTL+GYDQ NL+LDE E + + K + LGL
Sbjct: 10 LAQYVDTTVSVITNDGRTIVGTLRGYDQATNLILDECHERVYSS----KNGVEQLVLGLY 65
Query: 103 VCRGTAVMLVSPTDGTDEIANPFMQ 127
V RG + ++ D + + F Q
Sbjct: 66 VIRGDNIAVIGEIDDDKDASIDFNQ 90
>gi|303276468|ref|XP_003057528.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461880|gb|EEH59173.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK +++KL G R V G L+G+DQ LNLVLDE V DD +T LG++V RG
Sbjct: 1 MDKKLRLKLNGNRGVLGVLRGFDQFLNLVLDECV------DD---STSDKEPLGMVVVRG 51
Query: 107 TAV 109
++
Sbjct: 52 NSI 54
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V+ V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSAHGVEQV----LLGLY 60
Query: 103 VCRGTAVMLVSPTDGTDE------IANPFMQP 128
+ RG V+LV D DE +AN +P
Sbjct: 61 IVRGDNVVLVGQVD--DELDMRLDLANTRAEP 90
>gi|326435095|gb|EGD80665.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 91
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-------RDADDP 89
E LDL + +D+ V VK+ G R ++G L YDQ LN+VL + VE + ++
Sbjct: 6 EEPLDLIRLSLDERVTVKMRGNRVLSGQLHAYDQHLNMVLSDVVETITTSEIDEESYEEI 65
Query: 90 LKTTDQTRQLGLIVCRGTAVMLVSP 114
+KTT+ R++ ++ RG V+LV+P
Sbjct: 66 IKTTE--RKMPMLYVRGDGVILVAP 88
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 9/67 (13%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK +Q+K+ R V GTL+G+DQ +NLV+D VE + D+T +G++V RG
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--------VNGNDKT-DIGMVVIRG 51
Query: 107 TAVMLVS 113
+V+++
Sbjct: 52 NSVVMIE 58
>gi|354548424|emb|CCE45160.1| hypothetical protein CPAR2_701720 [Candida parapsilosis]
Length = 90
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 36 RKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RDADDPLK 91
+++ LDL +F +D+ V VKL G R+ G L+GYD NLVL +A E + +D +P+
Sbjct: 10 QQQEPLDLIRFQLDEYVIVKLRGAREFKGKLQGYDSHCNLVLSDATETIFSDKDGVEPI- 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVSP 114
++ ++ RG +V+L+SP
Sbjct: 69 ----IKRTEMVFVRGDSVILISP 87
>gi|339240555|ref|XP_003376203.1| putative LSM domain protein [Trichinella spiralis]
gi|316975093|gb|EFV58552.1| putative LSM domain protein [Trichinella spiralis]
Length = 109
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 30 SLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD--EAVEFLRDA 86
S + S E +DL + +D+ + VKL R++ G L YDQ LN+VL E +E + +
Sbjct: 8 SKQHSTTVEEPMDLVRLSLDERIFVKLRSNRELRGRLHAYDQHLNMVLGDVEEIETIVEI 67
Query: 87 DDPLKT---TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANP 124
DD T TR ++ RG V+LVSP TD P
Sbjct: 68 DDETYEEVYTKNTRTFPMLFIRGDGVILVSPPTETDTKIYP 108
>gi|156841174|ref|XP_001643962.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156114593|gb|EDO16104.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 85
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQ 95
ET LDL K +D+ V VKL G R++ G L+ +D N+VL +AVE + + D LK+ ++
Sbjct: 4 ETPLDLLKLNLDEKVYVKLRGARELVGILQAFDSHCNIVLSDAVETIYELVDGELKSNEK 63
Query: 96 TRQLGLIVCRGTAVMLVSPTD 116
T ++ L V T ++ +PTD
Sbjct: 64 TSEM-LFVRGDTVTLITTPTD 83
>gi|426335864|ref|XP_004029426.1| PREDICTED: small nuclear ribonucleoprotein G [Gorilla gorilla
gorilla]
Length = 101
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
+F+DK + +KL GGR V G L+G+D +NLV+DE VE + T+ Q +G++
Sbjct: 15 GEFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMV 65
>gi|358054578|dbj|GAA99504.1| hypothetical protein E5Q_06204 [Mixia osmundae IAM 14324]
Length = 95
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++DK V V GR + G LKG+DQ N++L +++E + ++P++ LGL
Sbjct: 4 LQGYIDKRVLVITADGRTILGDLKGFDQTTNVILSDSIERVYSLEEPVEEV----PLGLF 59
Query: 103 VCRGTAVMLVSPTDGTDE 120
V RG V LV DG E
Sbjct: 60 VVRGDNVTLVGELDGERE 77
>gi|389631277|ref|XP_003713291.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|351645624|gb|EHA53484.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|440466674|gb|ELQ35928.1| sm snRNP core protein Smg1 [Magnaporthe oryzae Y34]
gi|440476979|gb|ELQ58129.1| sm snRNP core protein Smg1 [Magnaporthe oryzae P131]
Length = 88
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK V V+L G R+V G ++GYD LN+VL++A E +D + +K +G
Sbjct: 7 ELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLEDAFE-EKDGGEKVK-------IGT 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEAME 73
>gi|91774104|ref|YP_566796.1| small nuclear ribonucleoprotein [Methanococcoides burtonii DSM
6242]
gi|121684189|sp|Q12U30.1|RUXX_METBU RecName: Full=Putative snRNP Sm-like protein
gi|91713119|gb|ABE53046.1| Sm or Sm-like protein, RNA-binding [Methanococcoides burtonii DSM
6242]
Length = 72
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V V+L G R+ G L+GYD +NLVLDEA E LK + R++G +V RG V+
Sbjct: 17 VIVRLKGAREFRGVLQGYDVHMNLVLDEAEE--------LKDGEIVRKIGGVVIRGDNVV 68
Query: 111 LVSP 114
VSP
Sbjct: 69 YVSP 72
>gi|301097686|ref|XP_002897937.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|262106382|gb|EEY64434.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|348673260|gb|EGZ13079.1| hypothetical protein PHYSODRAFT_514215 [Phytophthora sojae]
Length = 64
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 8/64 (12%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + +KL G R+V+G L+G+DQ +N+ LDE VE + T+ R +G++V RG
Sbjct: 1 MDKRLSLKLNGNRKVSGVLRGFDQFMNVTLDETVE-------EVSATESNR-IGMVVIRG 52
Query: 107 TAVM 110
+++
Sbjct: 53 NSIV 56
>gi|449267710|gb|EMC78623.1| Small nuclear ribonucleoprotein G, partial [Columba livia]
Length = 58
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
VKL GGR V G L+G+D +NLV+DE VE + Q +G++V RG +++++
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVE--------MAPGGQQNNIGMVVIRGNSIIML 52
Query: 113 SPTD 116
+
Sbjct: 53 EALE 56
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ + +K V V GR +TGTL GYDQL NL+L + E + D P++ +LGL
Sbjct: 5 LSDWSEKTVTVLTCDGRLITGTLAGYDQLQNLILSRSSERVYSVDSPVEVV----ELGLF 60
Query: 103 VCRGTAVMLV 112
V RG V ++
Sbjct: 61 VVRGDNVAII 70
>gi|156839006|ref|XP_001643199.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113798|gb|EDO15341.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 76
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTDQTRQLG 100
+L K+++K V ++L G R+V G L+GYD LN+V+D+A+E +D + PL + QT
Sbjct: 6 ELKKYMEKKVLLQLNGSRKVAGILRGYDIFLNVVIDDAIEISKDGTNIPLGS--QT---- 59
Query: 101 LIVCRGTAVMLVSPTD 116
V RG +V+ + D
Sbjct: 60 --VIRGNSVVSLEALD 73
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +++ V +KL GG+ + G L G+DQ +NL+LD + E + T ++ LG I
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEE--------IPTEGNSKSLGTI 61
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 62 VVRGDNVVMISP 73
>gi|408381788|ref|ZP_11179336.1| small nuclear ribonucleoprotein [Methanobacterium formicicum DSM
3637]
gi|407815719|gb|EKF86289.1| small nuclear ribonucleoprotein [Methanobacterium formicicum DSM
3637]
Length = 80
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + ++ V +KL GGR+ G L+ +D +NLVL++A E L++ + +R+LG++
Sbjct: 16 LGRALNSQVLIKLKGGREFRGVLESFDMHMNLVLNDAEE--------LESGESSRRLGVV 67
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 68 LIRGDNIVYISP 79
>gi|367000792|ref|XP_003685131.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS 4417]
gi|357523429|emb|CCE62697.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS 4417]
Length = 76
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + +KL G R++ G L+GYD LN+V+D+AVE ++ L QT
Sbjct: 6 ELKKYLEKKIVIKLNGERRIAGVLRGYDVFLNVVVDDAVEVSKNG-TSLNLGSQT----- 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG +++ + D
Sbjct: 60 -VVRGNSILSIEALD 73
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 23/86 (26%)
Query: 42 DLAKFVDKGVQ--------------VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD 87
DL K++DK +Q VKL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMNLVVDNTVEV----- 63
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVS 113
++ +G++V RG +V+++
Sbjct: 64 ----NGNEKNDIGMVVIRGNSVVMIE 85
>gi|402086284|gb|EJT81182.1| hypothetical protein GGTG_01166 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 95
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD--EAVEFLRDADDPLKTTDQTRQLGLIV 103
+D+ V VKL G R++ G L YD NLVL E +++D +D +R+L ++
Sbjct: 19 LLDEVVFVKLRGDRELKGRLHAYDSHCNLVLGDVEETHYMQDEEDEADLKTVSRKLEMLF 78
Query: 104 CRGTAVMLVSPTD 116
RG +V+L+SP++
Sbjct: 79 VRGDSVVLISPSE 91
>gi|387592745|gb|EIJ87769.1| hypothetical protein NEQG_01841 [Nematocida parisii ERTm3]
gi|387595371|gb|EIJ92995.1| hypothetical protein NEPG_01950 [Nematocida parisii ERTm1]
Length = 114
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA--VEFLRDADDPLK 91
+ +++ V DL K++ K +++ GG +VTG L GYDQLLNLVL+ V F ++
Sbjct: 7 TSKRDQVFDLEKYLGKDIRICFFGGIEVTGCLLGYDQLLNLVLENGRMVSFFNSENELPD 66
Query: 92 TTDQTRQLGL-IVCRGTAV 109
D T Q ++C+G ++
Sbjct: 67 LKDLTLQPPTSMMCKGISI 85
>gi|449018428|dbj|BAM81830.1| similar to U6 snRNA-associated Sm-like protein LSm7
[Cyanidioschyzon merolae strain 10D]
Length = 204
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD 88
+ L+++ + + VQV L GGR V G L G+D L NLVL++AVE+ +DA +
Sbjct: 68 SALEVSPWSGQTVQVLLVGGRCVIGKLVGWDTLANLVLEDAVEYFQDARE 117
>gi|326936526|ref|XP_003214304.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial
[Meleagris gallopavo]
Length = 60
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
VKL GGR V G L+G+D +NLV+DE VE + Q +G++V RG +++++
Sbjct: 3 VKLNGGRHVQGILRGFDPFMNLVIDECVE--------MAPGGQQNNIGMVVIRGNSIIML 54
Query: 113 SPTD 116
+
Sbjct: 55 EALE 58
>gi|284162105|ref|YP_003400728.1| Sm ribonucleoprotein-like protein [Archaeoglobus profundus DSM
5631]
gi|284012102|gb|ADB58055.1| Like-Sm ribonucleoprotein core [Archaeoglobus profundus DSM 5631]
Length = 74
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K + V V+L GGR+ G L GYD +N+VL+ A E ++ + R+LG +
Sbjct: 9 LNKALQTPVLVRLKGGREFRGILNGYDIHMNIVLENAEE--------IQNGEVVRKLGSV 60
Query: 103 VCRGTAVMLVSPTD 116
V RG V+ VSP++
Sbjct: 61 VIRGDTVVFVSPSE 74
>gi|329765899|ref|ZP_08257464.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795327|ref|ZP_10378691.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137605|gb|EGG41876.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 78
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +++ V +KL GG+ + G L G+DQ +NL+LD + E + + ++ LG I
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPVEGN--------SKSLGTI 61
Query: 103 VCRGTAVMLVSPTDGTD 119
V RG V+++SP T+
Sbjct: 62 VVRGDNVVMISPPPATN 78
>gi|410720309|ref|ZP_11359665.1| small nuclear ribonucleoprotein [Methanobacterium sp. Maddingley
MBC34]
gi|410601091|gb|EKQ55611.1| small nuclear ribonucleoprotein [Methanobacterium sp. Maddingley
MBC34]
Length = 100
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + ++ V +KL GGR+ G L+ +D +NLVL++A E L++ + +R+LG++
Sbjct: 36 LGRALNSQVLIKLKGGREFRGVLESFDMHMNLVLNDAEE--------LESGESSRRLGVV 87
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 88 LIRGDNIVYISP 99
>gi|403216098|emb|CCK70596.1| hypothetical protein KNAG_0E03380 [Kazachstania naganishii CBS
8797]
Length = 77
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 35/44 (79%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD 85
+L +++DK V +++ G R+V GT++G+D LN+VLD+AVE L++
Sbjct: 6 ELKRYMDKKVVLQINGSRKVAGTMRGFDLFLNVVLDDAVELLQE 49
>gi|332796496|ref|YP_004457996.1| Sm1 protein [Acidianus hospitalis W1]
gi|332694231|gb|AEE93698.1| archaeal Sm1 protein [Acidianus hospitalis W1]
Length = 76
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + V VKL G ++V G LK YDQ +NLVL ++ E D +++G I
Sbjct: 9 LAESLGSLVLVKLKGNKEVRGLLKSYDQHMNLVLSDSEEIQSDGSG--------KKIGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDNVILISP 72
>gi|367012788|ref|XP_003680894.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
gi|359748554|emb|CCE91683.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
Length = 85
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTDQ 95
ET LDL K +D+ V VKL G R++ GTL+ +D N+VL +AVE + + LK+T++
Sbjct: 4 ETPLDLLKLNLDERVYVKLRGARELIGTLQAFDSHCNIVLSDAVETIYQLESGELKSTEK 63
Query: 96 TRQLGLIVCRGTAVMLV-SPTD 116
+ +I RG +V L+ +P D
Sbjct: 64 NSE--MIFVRGDSVTLITTPPD 83
>gi|342181229|emb|CCC90708.1| putative U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma
congolense IL3000]
Length = 167
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++L L +D+ V V L R+V G LKG+D +NLVL A + R+ +
Sbjct: 86 KKESILSLEAHLDRRVVVSLED-REVHGVLKGFDNNINLVLANAEIWRRET--------R 136
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R++G V RG ++ VS D T NPF+
Sbjct: 137 VRRIGACVVRGGLLVSVSSGDTTILKQNPFL 167
>gi|399216324|emb|CCF73012.1| unnamed protein product [Babesia microti strain RI]
Length = 93
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-DADDPLKTTD---- 94
LDL + +D+ V +K G R++TG L YD+ N++L++AVE + +DP T+
Sbjct: 11 LDLIRLTLDEYVYIKSKGNREITGKLHAYDEHCNIILEDAVETITVITEDPETGTESTSV 70
Query: 95 QTRQLGLIVCRGTAVMLVSP 114
T+ ++ RG +++LVSP
Sbjct: 71 NTKNSDVLFVRGDSIILVSP 90
>gi|401423638|ref|XP_003876305.1| putative Lsm7p protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492547|emb|CBZ27824.1| putative Lsm7p protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 91
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L K++D+ + V G +V G LKG+D +NLVL +A + R+
Sbjct: 11 KKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHRNT--------H 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R +G V RG V ++ D T I NPF+
Sbjct: 62 MRTIGACVVRGGPVNIILSGD-TTVIPNPFI 91
>gi|149235353|ref|XP_001523555.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452964|gb|EDK47220.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 90
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQL 99
LDL +F +D V VKL G R++ G L+GYD N+VL +A E + D P T ++
Sbjct: 15 LDLIRFQLDDYVVVKLRGARELYGKLQGYDSHCNMVLSDATETIY-GDSP-DTKPVKKKT 72
Query: 100 GLIVCRGTAVMLVSP 114
++ RG +V+L+SP
Sbjct: 73 DMVFVRGDSVILISP 87
>gi|288932200|ref|YP_003436260.1| Like-Sm ribonucleoprotein core [Ferroglobus placidus DSM 10642]
gi|288894448|gb|ADC65985.1| Like-Sm ribonucleoprotein core [Ferroglobus placidus DSM 10642]
Length = 73
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K + V V+L GGR+ GTL GYD +NLVL +A E ++ + R+LG +
Sbjct: 8 LNKALKTPVLVRLKGGREFRGTLDGYDIHMNLVLVDAEE--------IQNGEVVRKLGSV 59
Query: 103 VCRGTAVMLVSPT 115
V RG V+ VSP+
Sbjct: 60 VIRGDTVVFVSPS 72
>gi|88604287|ref|YP_504465.1| like-Sm ribonucleoprotein, core [Methanospirillum hungatei JF-1]
gi|88189749|gb|ABD42746.1| Small nuclear ribonucleoprotein, LSM family [Methanospirillum
hungatei JF-1]
Length = 80
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD 87
++ + M+ R +LD + V + L GGR++ G L+GYD +NLVLD+A E ++
Sbjct: 1 MQGIDMTKRPMDILDQV-LNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIVQ--- 56
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVSPT 115
Q + +G ++ RG V+ +SP
Sbjct: 57 ------GQAQSIGTLIIRGDNVIYISPN 78
>gi|340059633|emb|CCC54026.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma vivax Y486]
Length = 81
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K+ + +L F++K V +KL GGR V+G L+G DQ +++VL +AV+ + D + +
Sbjct: 4 KKGIPNLNHFMEKRVMLKLQGGRSVSGELRGVDQFMSVVLHDAVDESQRGSD---SEGEK 60
Query: 97 RQLGLIVCRGTAVM 110
LG+ V RG+ ++
Sbjct: 61 TPLGVAVIRGSMIV 74
>gi|448122563|ref|XP_004204478.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|448124870|ref|XP_004205036.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358249669|emb|CCE72735.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358350017|emb|CCE73296.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
Length = 74
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +++K + ++L G R+V GTL+GYD LN+ L EA+E +D + +G
Sbjct: 6 ELKNYLNKKISIQLNGTRKVIGTLRGYDIFLNVTLSEALEEQKDGNKL--------DIGT 57
Query: 102 IVCRGTAVM 110
+V RG +V+
Sbjct: 58 VVIRGNSVV 66
>gi|255710607|ref|XP_002551587.1| KLTH0A02970p [Lachancea thermotolerans]
gi|238932964|emb|CAR21145.1| KLTH0A02970p [Lachancea thermotolerans CBS 6340]
Length = 76
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+L K++DK V ++L G R++ G L+G+D LN+VLD+AVE +D
Sbjct: 6 ELKKYMDKKVYIQLNGSRKLVGVLRGFDIFLNVVLDDAVEVRKDG 50
>gi|365759243|gb|EHN01044.1| Lsm3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 126
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE + ++ + ++
Sbjct: 2 DTPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDE 120
R+ ++ RG V L+S + DE
Sbjct: 61 RRCEMVFVRGDTVTLISTPNEDDE 84
>gi|398016803|ref|XP_003861589.1| Lsm7p protein, putative [Leishmania donovani]
gi|322499816|emb|CBZ34889.1| Lsm7p protein, putative [Leishmania donovani]
Length = 91
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L K++D+ V V +V G LKG+D +NLVL +A + R+
Sbjct: 11 KKEGILSLEKYLDRKVVVS-QKNHEVHGVLKGFDNNVNLVLADAELWHRNT--------H 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R++G V RG V L+ D T I NPF+
Sbjct: 62 IRKIGACVVRGGPVNLILSGD-TTIIPNPFI 91
>gi|109458413|ref|XP_001063547.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392337649|ref|XP_003753311.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
K +D + +KL GGR+V G L+G+D +NLV+DE VE + + Q G++V
Sbjct: 11 KVMDGKLSLKLDGGRRVRGVLRGFDPFMNLVVDECVE--------MGNSGQQNNSGVVVI 62
Query: 105 RGTAVMLVS 113
RG +++++
Sbjct: 63 RGNSIVMLE 71
>gi|389860536|ref|YP_006362775.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus 1633]
gi|388525439|gb|AFK50637.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus 1633]
Length = 76
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + V K V +K+ G + G L+ YDQ LN+VLD+A E D +R+LG +
Sbjct: 10 LEENVGKIVLIKMKGEVSIRGKLRSYDQHLNIVLDDAEEVRGDG--------SSRKLGTL 61
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 62 VIRGDTVVLISP 73
>gi|374633102|ref|ZP_09705469.1| small nuclear ribonucleoprotein [Metallosphaera yellowstonensis
MK1]
gi|373524586|gb|EHP69463.1| small nuclear ribonucleoprotein [Metallosphaera yellowstonensis
MK1]
Length = 78
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA+ + V VKL G ++V G LK YDQ +NLVL ++ E D +++G I
Sbjct: 12 LAESLGNLVLVKLKGNKEVRGLLKSYDQHMNLVLSDSEEIQSDGGG--------KKMGTI 63
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 64 VIRGDNVILISP 75
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLV----SPTDGTDEIANPFMQP 128
+ RG V ++ TD T ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEETDSTLDLGNIRAEP 90
>gi|83769163|dbj|BAE59300.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 216
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKTT 93
K ++ ++V L GRQ+TG + +D+ +NLVL + EF R A+ PL +
Sbjct: 7 GKMINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGPANAPLVES 66
Query: 94 DQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 67 EEKRTLGLTIVRGTHVVSCS 86
>gi|237844935|ref|XP_002371765.1| LSM domain-containing protein [Toxoplasma gondii ME49]
gi|211969429|gb|EEB04625.1| LSM domain-containing protein [Toxoplasma gondii ME49]
gi|221480823|gb|EEE19247.1| LSM domain-containing protein, putative [Toxoplasma gondii GT1]
gi|221501570|gb|EEE27343.1| LSM domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPL----KTTD 94
LD+ + +D+ V +K G R+V G L YD LN+VL + E DPL +T
Sbjct: 11 LDIVRVSLDERVTIKCRGDREVVGKLHAYDMHLNMVLGDVEEVATTVTSDPLTGDEQTKK 70
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
TR+L LI RG A++LV+P +
Sbjct: 71 TTRRLPLIFLRGDAIILVAPVN 92
>gi|224005396|ref|XP_002296349.1| human U6 snRNA-associated protein LSm8-like protein [Thalassiosira
pseudonana CCMP1335]
gi|209586381|gb|ACI65066.1| human U6 snRNA-associated protein LSm8-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 106
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ + +K V + GR +TG L GYDQL NL+L ++ E + +D P++ +LGL
Sbjct: 5 LSDWTNKPVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSSDSPVEKV----ELGLF 60
Query: 103 VCRGTAVMLVSPTDGT 118
V RG V +V + T
Sbjct: 61 VVRGDNVAVVGDGNST 76
>gi|401624580|gb|EJS42636.1| lsm3p [Saccharomyces arboricola H-6]
Length = 89
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE + ++ + ++
Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARSLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDE 120
R+ ++ RG V L+S + D+
Sbjct: 61 RRCEMVFVRGDTVTLISTPNEDDD 84
>gi|328770153|gb|EGF80195.1| hypothetical protein BATDEDRAFT_11709 [Batrachochytrium
dendrobatidis JAM81]
Length = 70
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
+++D+ + V+L G R+VTG L+GYD +N+VL++A E L D + LG IV
Sbjct: 3 RYMDRKLFVQLNGNRKVTGVLRGYDPFMNIVLEDASEELGDGEKNF--------LGSIVV 54
Query: 105 RGTAV 109
RG ++
Sbjct: 55 RGNSI 59
>gi|344242125|gb|EGV98228.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 51
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+L K +DK + +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 8 ELKKCMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEI 48
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L F+++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENFINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|336477290|ref|YP_004616431.1| Sm ribonucleoprotein-like protein [Methanosalsum zhilinae DSM 4017]
gi|335930671|gb|AEH61212.1| Like-Sm ribonucleoprotein core [Methanosalsum zhilinae DSM 4017]
Length = 72
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +L+ A ++ V V+L G R+ G L+GYD +NLVLD A E LK
Sbjct: 1 MANRPLDILNNA--LNTPVIVRLKGAREFRGELQGYDVHMNLVLDNAEE--------LKD 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ R+LG +V RG V+ +SP
Sbjct: 51 GEIVRKLGSVVIRGDNVVYLSP 72
>gi|170785183|pdb|3BW1|A Chain A, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting Novel
Octameric Ring Organisation
gi|170785184|pdb|3BW1|B Chain B, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting Novel
Octameric Ring Organisation
Length = 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE + ++ + ++
Sbjct: 9 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 67
Query: 97 RQLGLIVCRGTAVMLVS-PTDGTD 119
R+ ++ RG V L+S P++ D
Sbjct: 68 RRCEMVFIRGDTVTLISTPSEDDD 91
>gi|73670936|ref|YP_306951.1| small nuclear ribonucleoprotein [Methanosarcina barkeri str.
Fusaro]
gi|121724584|sp|Q465S1.1|RUXX_METBF RecName: Full=Putative snRNP Sm-like protein
gi|72398098|gb|AAZ72371.1| Small nuclear ribonucleoprotein, LSM family [Methanosarcina barkeri
str. Fusaro]
Length = 72
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E L+
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEE--------LRE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ + G +V RG V+ VSP
Sbjct: 51 GEVVSKFGSVVIRGDNVVYVSP 72
>gi|428671909|gb|EKX72824.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia equi]
Length = 94
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +F++ V V GR G LKG+DQL NLVL +E + D P++ +LG+
Sbjct: 5 LEQFIECHVFVISVDGRVFVGVLKGFDQLTNLVLYNCIERVYHVDSPVEEL----ELGIY 60
Query: 103 VCRGTAVMLVSPTD 116
V RG V+LV D
Sbjct: 61 VVRGDNVVLVGEVD 74
>gi|115398031|ref|XP_001214607.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192798|gb|EAU34498.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKTT 93
K ++ ++V L GRQ+TG + +D+ +NLVL + EF R A+ PL +
Sbjct: 7 GKMINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGAANAPLVES 66
Query: 94 DQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 67 EEKRTLGLAIVRGTHVVSCS 86
>gi|354682607|gb|AER30223.1| small nuclear ribonucleoprotein [Rhodotorula colostri]
Length = 44
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
QTR LGL V RGT+++++SP DG++EIANPF
Sbjct: 11 QTRNLGLAVLRGTSLVVISPVDGSEEIANPF 41
>gi|119500980|ref|XP_001267247.1| small nuclear ribonucleoprotein SmB, putative [Neosartorya fischeri
NRRL 181]
gi|119415412|gb|EAW25350.1| small nuclear ribonucleoprotein SmB, putative [Neosartorya fischeri
NRRL 181]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKTT 93
K ++ +++ LT GRQ+TG + +D+ +NLVL + EF R ++ PL
Sbjct: 7 GKMINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGPSNAPLVEA 66
Query: 94 DQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 67 EEKRTLGLTIVRGTHVVSCS 86
>gi|11498481|ref|NP_069709.1| small nuclear ribonucleoprotein [Archaeoglobus fulgidus DSM 4304]
gi|6094214|sp|O29386.1|RUXX_ARCFU RecName: Full=Putative snRNP Sm-like protein
gi|15826634|pdb|1I5L|A Chain A, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826635|pdb|1I5L|B Chain B, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826636|pdb|1I5L|C Chain C, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826637|pdb|1I5L|D Chain D, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826638|pdb|1I5L|E Chain E, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826639|pdb|1I5L|F Chain F, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826640|pdb|1I5L|G Chain G, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826641|pdb|1I5L|H Chain H, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826642|pdb|1I5L|I Chain I, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826643|pdb|1I5L|J Chain J, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826644|pdb|1I5L|K Chain K, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826645|pdb|1I5L|L Chain L, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826646|pdb|1I5L|M Chain M, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826647|pdb|1I5L|N Chain N, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus Complexed With Short Poly-U Rna
gi|15826691|pdb|1I4K|A Chain A, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826692|pdb|1I4K|B Chain B, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826693|pdb|1I4K|C Chain C, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826694|pdb|1I4K|D Chain D, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826695|pdb|1I4K|E Chain E, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826696|pdb|1I4K|F Chain F, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826697|pdb|1I4K|G Chain G, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826698|pdb|1I4K|H Chain H, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826699|pdb|1I4K|I Chain I, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826700|pdb|1I4K|J Chain J, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826701|pdb|1I4K|K Chain K, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826702|pdb|1I4K|L Chain L, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826703|pdb|1I4K|M Chain M, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826704|pdb|1I4K|N Chain N, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826705|pdb|1I4K|O Chain O, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826706|pdb|1I4K|P Chain P, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826707|pdb|1I4K|Q Chain Q, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826708|pdb|1I4K|R Chain R, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826709|pdb|1I4K|S Chain S, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826710|pdb|1I4K|T Chain T, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826711|pdb|1I4K|U Chain U, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826712|pdb|1I4K|V Chain V, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826713|pdb|1I4K|W Chain W, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826714|pdb|1I4K|X Chain X, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826715|pdb|1I4K|Y Chain Y, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826716|pdb|1I4K|Z Chain Z, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826717|pdb|1I4K|1 Chain 1, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|15826718|pdb|1I4K|2 Chain 2, Crystal Structure Of An Sm-Like Protein (Af-Sm1) From
Archaeoglobus Fulgidus At 2.5a Resolution
gi|2649736|gb|AAB90374.1| snRNP, putative [Archaeoglobus fulgidus DSM 4304]
Length = 77
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + + V V+L GGR+ GTL GYD +NLVL +A E ++ + R++G +
Sbjct: 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE--------IQNGEVVRKVGSV 60
Query: 103 VCRGTAVMLVSPTDGTD 119
V RG V+ VSP G +
Sbjct: 61 VIRGDTVVFVSPAPGGE 77
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L+ V V VKL G + GTLK YDQ +NL+LD+ E + DP + + G+
Sbjct: 12 ELSSVVGSTVLVKLRDGTTIRGTLKNYDQHMNLLLDDTEEII----DPKTSIKR----GM 63
Query: 102 IVCRGTAVMLVSP 114
+V RG V+ VSP
Sbjct: 64 VVIRGDTVLFVSP 76
>gi|398366287|ref|NP_013543.3| Lsm3p [Saccharomyces cerevisiae S288c]
gi|12230246|sp|P57743.1|LSM3_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm3; AltName:
Full=SmX4 protein
gi|151940954|gb|EDN59336.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190405474|gb|EDV08741.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|256271118|gb|EEU06213.1| Lsm3p [Saccharomyces cerevisiae JAY291]
gi|259148415|emb|CAY81662.1| Lsm3p [Saccharomyces cerevisiae EC1118]
gi|285813843|tpg|DAA09739.1| TPA: Lsm3p [Saccharomyces cerevisiae S288c]
gi|349580131|dbj|GAA25292.1| K7_Lsm3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297940|gb|EIW09039.1| Lsm3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 89
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE + ++ + ++
Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60
Query: 97 RQLGLIVCRGTAVMLVS-PTDGTD 119
R+ ++ RG V L+S P++ D
Sbjct: 61 RRCEMVFIRGDTVTLISTPSEDDD 84
>gi|346468165|gb|AEO33927.1| hypothetical protein [Amblyomma maculatum]
Length = 99
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + ++L G R +TG L+G+D +NLVLDE VE
Sbjct: 8 ELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVE 47
>gi|148642242|ref|YP_001272755.1| small nuclear ribonucleoprotein [Methanobrevibacter smithii ATCC
35061]
gi|222444586|ref|ZP_03607101.1| hypothetical protein METSMIALI_00198 [Methanobrevibacter smithii
DSM 2375]
gi|261350875|ref|ZP_05976292.1| like-Sm ribonucleoprotein, core [Methanobrevibacter smithii DSM
2374]
gi|148551259|gb|ABQ86387.1| snRNP Sm-like protein [Methanobrevibacter smithii ATCC 35061]
gi|222434151|gb|EEE41316.1| LSM domain protein [Methanobrevibacter smithii DSM 2375]
gi|288860212|gb|EFC92510.1| like-Sm ribonucleoprotein, core [Methanobrevibacter smithii DSM
2374]
Length = 76
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 10/84 (11%)
Query: 33 MSGRK-ETVLD-LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPL 90
MSG+ + LD L K V+ V +KL G R+ G LK +D +NLVL++A E L
Sbjct: 1 MSGQNVQRPLDALGKSVNSPVLIKLKGDREFRGILKSFDLHMNLVLNDAEE--------L 52
Query: 91 KTTDQTRQLGLIVCRGTAVMLVSP 114
+ + TR+LG+++ RG ++ +SP
Sbjct: 53 QDGEVTRRLGVVLIRGDNIVYISP 76
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 48 DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGT 107
DK V V GR +TG LKG+DQ N++L ++VE + +D+P++ LGL + RG
Sbjct: 63 DKRVLVITQDGRTITGELKGFDQTTNIILSDSVERVYSSDEPMEEV----PLGLYIVRGD 118
Query: 108 AVMLV 112
+ ++
Sbjct: 119 HISVI 123
>gi|384491006|gb|EIE82202.1| hypothetical protein RO3G_06907 [Rhizopus delemar RA 99-880]
Length = 102
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 35 GRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT 93
G E LDL + +D+ V VKL G R++TG L YD LN+VL E E + D +T
Sbjct: 13 GAVEEPLDLVRLSLDERVYVKLRGDRELTGILHAYDGHLNMVLGEVEETITMVDVNEETL 72
Query: 94 DQT-----RQLGLIVCRGTAVMLVSPTDGT 118
++ R ++ RG V+LVSP T
Sbjct: 73 EEVIRTVKRTFEMLFVRGDGVILVSPPSRT 102
>gi|401426935|ref|XP_003877951.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494198|emb|CBZ29495.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 81
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL +A++ R+A + +
Sbjct: 4 HKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNA----AVSGEA 59
Query: 97 RQ-LGLIVCRGTAVM 110
R LG V RG+A++
Sbjct: 60 RMALGTTVIRGSAIV 74
>gi|401838766|gb|EJT42227.1| LSM3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 89
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
+T LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE + ++ + ++
Sbjct: 2 DTPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60
Query: 97 RQLGLIVCRGTAVMLVSPTDGTDE 120
R+ ++ RG V L+S + DE
Sbjct: 61 RRCEMVFVRGDTVTLISTPNEDDE 84
>gi|325959826|ref|YP_004291292.1| snRNP Sm-like protein [Methanobacterium sp. AL-21]
gi|325331258|gb|ADZ10320.1| snRNP Sm-like protein [Methanobacterium sp. AL-21]
Length = 80
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++ V ++L GGR+ G LK +D +NLVL+EA E D L+T ++LG++
Sbjct: 16 LGKSLNSQVLIELKGGREFRGLLKSFDMHMNLVLNEAEEL-----DGLET---AKRLGIV 67
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 68 LIRGDNIVYISP 79
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V++ V + GR + GTLKG+DQ +NL+LDE+ E + TT Q LG
Sbjct: 5 LESYVNRTVSIVTADGRIIVGTLKGFDQTINLILDESHERV------FSTTQGVEQVILG 58
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V ++ D
Sbjct: 59 LYIIRGDNVAVIGEID 74
>gi|355571637|ref|ZP_09042865.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
gi|354825270|gb|EHF09500.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
Length = 75
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V V L GGR++ G L+GYD +NLVLD+A E Q+R +G ++ RG V+
Sbjct: 18 VIVSLKGGRELRGVLQGYDVHMNLVLDKAEEI---------EGGQSRSVGTLIVRGDNVI 68
Query: 111 LVSPT 115
+SP+
Sbjct: 69 YISPS 73
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+K V V V+L G+ + G LKGYDQ +N+VL++ E + + + +LG I
Sbjct: 10 LSKSVGSTVLVRLRNGKVLRGLLKGYDQHMNIVLEDTDELIDE--------NTQNKLGTI 61
Query: 103 VCRGTAVMLVSP 114
V RG +++++SP
Sbjct: 62 VVRGDSIVMISP 73
>gi|148676870|gb|EDL08817.1| mCG2658 [Mus musculus]
Length = 64
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + +KL GGR V G L G+D +NLV DE VE + T+ Q + ++V RG
Sbjct: 1 MDKKLSLKLNGGRHVQGILLGFDPFMNLVTDECVE--------MATSGQQNNISMVVIRG 52
Query: 107 TAVM 110
+++
Sbjct: 53 NSII 56
>gi|354682630|gb|AER30237.1| small nuclear ribonucleoprotein [Sporidiobolus longiusculus]
Length = 43
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 92 TTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
+ QTR LGL V RGT+++++SP DG++EIANPF
Sbjct: 8 SPPQTRSLGLAVLRGTSLVVLSPVDGSEEIANPF 41
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 35 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 90
Query: 103 VCRGTAVMLV----SPTDGTDEIANPFMQP 128
+ RG V ++ TD ++ N +P
Sbjct: 91 IVRGDNVAVIGEIDEETDSALDLGNIRAEP 120
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L VDK + V L G+++ G L+ YDQ NLVL + +E + D K TD R G+
Sbjct: 16 LVDIVDKKILVSLRDGKKLIGVLRSYDQFANLVLQDTIERIHDG--ICKYTDIWR--GIY 71
Query: 103 VCRGTAVMLVSPT--DGTDEIANPF 125
+ RG V+L+ D DEI F
Sbjct: 72 LVRGENVVLLGEIDLDKEDEIIKRF 96
>gi|126460705|ref|YP_001056983.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250426|gb|ABO09517.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 86
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++K V +L GG V G L YD +NLVLD+A E R + + G I
Sbjct: 17 LTKMLNKEVVARLKGGIAVKGVLTAYDSCMNLVLDDAAELDRSG-------EPVTRYGRI 69
Query: 103 VCRGTAVMLVSPTD 116
V RG+ V+ VS D
Sbjct: 70 VVRGSQVIYVSAID 83
>gi|354682622|gb|AER30231.1| small nuclear ribonucleoprotein [Sporidiobolus pararoseus]
gi|354682627|gb|AER30235.1| small nuclear ribonucleoprotein [Sporidiobolus pararoseus]
Length = 44
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 95 QTRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
QTR LGL V RGT+++++SP DG++EIANPF
Sbjct: 11 QTRSLGLAVLRGTSLVVLSPVDGSEEIANPF 41
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V++ V V + GR + GTLKG+DQ +NL+L+E+ E + + +K LGL
Sbjct: 5 LENYVNRTVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|345566656|gb|EGX49598.1| hypothetical protein AOL_s00078g87 [Arthrobotrys oligospora ATCC
24927]
Length = 75
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K+++K + V+L G R++ G L+GYD LNL +D+ +E K + ++G
Sbjct: 7 ELKKYLEKRLFVQLNGSRKIIGVLRGYDIFLNLCMDDCIEE--------KAGGEKERIGT 58
Query: 102 IVCRGTAVMLVSPTD 116
+V RG +V+++ +
Sbjct: 59 VVIRGNSVVMLEALE 73
>gi|448117816|ref|XP_004203349.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|448120256|ref|XP_004203932.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384217|emb|CCE78921.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384800|emb|CCE78335.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
Length = 101
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
++ F+DK V+V T R G L+GYD N++L +E + + D +QT +LGL
Sbjct: 6 ISTFIDKRVRVITTDARLFEGILEGYDNSTNIILKSCIERIINTSD--HEHNQTIELGLY 63
Query: 103 VCRGTAVMLVSPTDGTD 119
+ RG V+ + D T+
Sbjct: 64 ILRGGNVVCIGEIDETE 80
>gi|19112539|ref|NP_595747.1| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|10720084|sp|Q9Y7M4.2|LSM3_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm3
gi|6942158|emb|CAB42366.2| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe]
Length = 93
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-------RDADDPLKT 92
LDL + +D+ V VKL G R++ G L YD+ LN+VL +A E + D D LKT
Sbjct: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKT 70
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ ++ RG +V+L++P
Sbjct: 71 I--RKHYEMLFVRGDSVILIAP 90
>gi|330918430|ref|XP_003298219.1| hypothetical protein PTT_08854 [Pyrenophora teres f. teres 0-1]
gi|311328701|gb|EFQ93672.1| hypothetical protein PTT_08854 [Pyrenophora teres f. teres 0-1]
Length = 96
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 33 MSGRKET--VLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL---DEAVEFLRDA 86
M ++ET LDL + +D+ V VKL G R++ G L YD NLVL +E + +
Sbjct: 1 MEEKEETNEPLDLVRLCIDEVVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYMAEEE 60
Query: 87 DDPLKTTDQT--RQLGLIVCRGTAVMLVSPTDGT 118
DD + +T +Q ++ RG +V+L++P +GT
Sbjct: 61 DDDQEPRVRTVKKQSEMLFVRGDSVVLIAPAEGT 94
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEDTDSSLDLGNIRAEP 90
>gi|71416218|ref|XP_810148.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma cruzi strain
CL Brener]
gi|70874638|gb|EAN88297.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma cruzi]
Length = 92
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L +D+ V + L G +++ G LKG+D +NLV+ A +++DA
Sbjct: 11 KKEGILALEPHLDRRVVIVLEG-KEIHGILKGFDNNINLVMASAELWVKDA--------L 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R++G V RG +++ VS D T NPF
Sbjct: 62 LRRIGACVVRGGSLVSVSSGDTTILQHNPF 91
>gi|327401120|ref|YP_004341959.1| snRNP Sm-like protein [Archaeoglobus veneficus SNP6]
gi|327316628|gb|AEA47244.1| snRNP Sm-like protein [Archaeoglobus veneficus SNP6]
Length = 74
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R VL+ K + V V+L GGR+ G L GYD +NLVL A E ++
Sbjct: 1 MANRPLDVLN--KALQTPVLVRLKGGREFRGILNGYDIHMNLVLQNAEE--------IQG 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSPT 115
+ R+LG +V RG V+ VSP+
Sbjct: 51 GEVIRKLGSVVIRGDTVVFVSPS 73
>gi|430813883|emb|CCJ28802.1| unnamed protein product [Pneumocystis jirovecii]
Length = 97
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRDADDPLKT-TDQT 96
LDL + +D+ V VKL G R++ G L YD LN+VL + E ++ D D+ + + +
Sbjct: 17 LDLVRLSLDERVYVKLRGDREIKGRLHAYDSHLNMVLSDVEETVYIVDIDETEEHISTKK 76
Query: 97 RQLGLIVCRGTAVMLVSP 114
+ +I RG +V+L+SP
Sbjct: 77 KHSEMIFVRGDSVILISP 94
>gi|336364678|gb|EGN93033.1| hypothetical protein SERLA73DRAFT_146187 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386725|gb|EGO27871.1| hypothetical protein SERLADRAFT_383548 [Serpula lacrymans var.
lacrymans S7.9]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRDADDPLKTTDQT----RQLGLIVC 104
V VKL G R+VTG L YD +NL+L + E + D D PL+ R++ ++
Sbjct: 23 VYVKLRGDREVTGILHAYDGHMNLILSDVEETIMIVDVDAPLEERRAVKMAKRKMEMLFV 82
Query: 105 RGTAVMLVSPTDGT 118
RG V+LVSP T
Sbjct: 83 RGDGVILVSPPSRT 96
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary subunit;
AltName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary subunit;
AltName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary subunit;
AltName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary subunit;
AltName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Bos
taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos grunniens
mutus]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|303390224|ref|XP_003073343.1| U6 snRNA-associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302489|gb|ADM11983.1| U6 snRNA-associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 88
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF--LRDADDPLKTTDQTRQ 98
L L K+V+ V+VK+ GR + GT+ D+ +N+VLD++ EF R + +P + R
Sbjct: 3 LSLGKYVNYRVKVKMKDGRWMEGTMLSVDEDVNVVLDDSEEFRNARGSKEP-----RRRV 57
Query: 99 LGLIVCRGTAVM----LVSPTDGTDEI 121
LGL++ RG VM L P G E+
Sbjct: 58 LGLVMARGDFVMDIEILSKPEKGEMEL 84
>gi|407464058|ref|YP_006774940.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus sp. AR2]
gi|407047246|gb|AFS81998.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus sp. AR2]
Length = 78
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +++ V +KL G + + G L G+DQ +NL+LD + E + D ++ LG I
Sbjct: 10 LDESINQVVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGD--------SKSLGSI 61
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 62 VVRGDNVVMISP 73
>gi|119872206|ref|YP_930213.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673614|gb|ABL87870.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum islandicum
DSM 4184]
Length = 86
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++K + +L GG V GTL YD +NLVLD A E L ++ +P+ + G I
Sbjct: 17 LTKMLNKEIVARLKGGVAVKGTLTAYDGCMNLVLDNAAE-LNNSGEPVT------RYGRI 69
Query: 103 VCRGTAVMLVS 113
V RG+ V+ VS
Sbjct: 70 VVRGSQVIYVS 80
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHECVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEDTDSSLDLGNIRAEP 90
>gi|146089304|ref|XP_001470350.1| putative Lsm7p protein [Leishmania infantum JPCM5]
gi|134070383|emb|CAM68720.1| putative Lsm7p protein [Leishmania infantum JPCM5]
Length = 91
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L K++D+ V V ++ G LKG+D +NLVL +A + R+
Sbjct: 11 KKEGILSLEKYLDRKVVVS-QKNHEMHGVLKGFDNNVNLVLADAELWHRNT--------H 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
R++G V RG V L+ D T I NPF+
Sbjct: 62 IRKIGACVVRGGPVNLILSGD-TTIIPNPFI 91
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|72389556|ref|XP_845073.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma brucei
TREU927]
gi|45331351|gb|AAS57929.1| Lsm7p [Trypanosoma brucei]
gi|62360185|gb|AAX80604.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma brucei]
gi|70801607|gb|AAZ11514.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261328440|emb|CBH11417.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma brucei
gambiense DAL972]
Length = 92
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE++L L +D+ V V L R+V G LKG+D +NLVL A + +D +
Sbjct: 11 KKESILSLEPHLDRRVVVSLED-REVHGVLKGFDNNINLVLANAEIWNKDV--------R 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
RQ+G V RG ++ VS D NPF
Sbjct: 62 ERQIGACVVRGGLLVSVSSGDTAILQQNPF 91
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 9 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 64
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 65 IVRGDNVAVIGEID 78
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+L+E+ E + + +K LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +++ + V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LEGYINHTISVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVS----PTDGTDEIANPFMQP 128
+ RG + +V TD + ++AN +P
Sbjct: 61 IIRGDNIAVVGEIDDETDNSLDLANIKAEP 90
>gi|350632124|gb|EHA20492.1| hypothetical protein ASPNIDRAFT_44190 [Aspergillus niger ATCC 1015]
Length = 310
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKTTD 94
K ++ ++V L GRQ+TG + +D+ +NLVL + EF R + PL +
Sbjct: 90 KMINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGSTNAPLVEAE 149
Query: 95 QTRQLGLIVCRGTAVMLVS 113
+ R LGL + RGT V+ S
Sbjct: 150 EKRTLGLTIVRGTHVVSCS 168
>gi|224004692|ref|XP_002295997.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586029|gb|ACI64714.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ + +K V + GR +TG L GYDQL NL+L ++ E + D P++ +LGL
Sbjct: 5 LSDWTNKPVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSLDSPVEKV----ELGLF 60
Query: 103 VCRGTAVMLVSPTDGT 118
V RG V +V + T
Sbjct: 61 VVRGDNVAVVGDGNST 76
>gi|67531296|ref|XP_662080.1| hypothetical protein AN4476.2 [Aspergillus nidulans FGSC A4]
gi|40741629|gb|EAA60819.1| hypothetical protein AN4476.2 [Aspergillus nidulans FGSC A4]
Length = 395
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--------DADDPLKTTD 94
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF R + PL +
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKAKSAPGNAPLVEAE 68
Query: 95 QTRQLGLIVCRGTAVMLVSPTDG 117
+ R LGL + RGT V+ S DG
Sbjct: 69 EKRTLGLTIVRGTHVVSCS-VDG 90
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITADGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLV----SPTDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEETDSSLDLGNIRAEP 90
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEDTDSSLDLGNIRAEP 90
>gi|17543872|ref|NP_502579.1| Protein LSM-3 [Caenorhabditis elegans]
gi|14530659|emb|CAB60606.2| Protein LSM-3 [Caenorhabditis elegans]
Length = 102
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--RD 85
K + +S E LDL + +D+ V VK+ R++ G L+ +DQ LN+VL E E + R+
Sbjct: 6 KEVTLSATVEEPLDLLRLSLDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTRE 65
Query: 86 ADDPL--KTTDQTRQ-LGLIVCRGTAVMLVSP 114
D+ + QT++ + ++ RG +V+LVSP
Sbjct: 66 VDEDTFEEIYKQTKRVVPMLFVRGDSVILVSP 97
>gi|432329499|ref|YP_007247642.1| small nuclear ribonucleoprotein [Methanoregula formicicum SMSP]
gi|432136208|gb|AGB01135.1| small nuclear ribonucleoprotein [Methanoregula formicicum SMSP]
Length = 75
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V V L GGR++ G L+GYD +NLVLD+A E Q +++G ++ RG V+
Sbjct: 18 VIVSLKGGREIRGVLQGYDVHMNLVLDKAEEV---------ENGQVQKVGTLIVRGDNVI 68
Query: 111 LVSPT 115
+SP+
Sbjct: 69 YISPS 73
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V+ V + + GR GTLKG+DQ +NL+LDE+ E + TT Q LG
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERV------YSTTQGVEQVVLG 58
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V +V D
Sbjct: 59 LHIIRGDNVAIVGEID 74
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADD-PLKTTDQTRQLG 100
+L K++++ + ++L G R+V G L+GYD LN+VLD+A+E ++ PL D T
Sbjct: 6 ELKKYMERKLFIQLNGSRKVVGVLRGYDVFLNVVLDDALEVHKNGRKFPL--GDHT---- 59
Query: 101 LIVCRGTAVMLVSPTD 116
V RG +++ + P +
Sbjct: 60 --VIRGNSIVSLEPLE 73
>gi|256077883|ref|XP_002575229.1| small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma mansoni]
gi|353231785|emb|CCD79140.1| putative small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma
mansoni]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK +++KL R+V G L+G+D +N+V+ +A E +D + ++ +
Sbjct: 8 ELKKYLDKRLRLKLNANREVVGVLRGFDAFMNIVVSDAYEVTKDGNQI--------KIDM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG ++ +V D
Sbjct: 60 AVVRGNSINIVEGVD 74
>gi|308492161|ref|XP_003108271.1| CRE-LSM-3 protein [Caenorhabditis remanei]
gi|308249119|gb|EFO93071.1| CRE-LSM-3 protein [Caenorhabditis remanei]
Length = 102
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--RD 85
K + +S E +DL + +D+ V VK+ R++ G L+ +DQ LN+VL E E + R+
Sbjct: 6 KEVTLSATVEEPIDLLRLSLDERVYVKMRNDREIRGRLRAFDQHLNMVLSEVEETITTRE 65
Query: 86 ADDPL--KTTDQTRQ-LGLIVCRGTAVMLVSP 114
D+ + QT++ + ++ RG +V+LVSP
Sbjct: 66 VDEDTFEEIYRQTKRVVPMLFVRGDSVILVSP 97
>gi|45199029|ref|NP_986058.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|44985104|gb|AAS53882.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|374109289|gb|AEY98195.1| FAFR511Cp [Ashbya gossypii FDAG1]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+L K++++ V ++L G R+V G L+GYD LN+VLD+AVE R
Sbjct: 6 ELKKYMERKVFLQLNGARKVVGVLRGYDLFLNVVLDDAVEITR 48
>gi|58260056|ref|XP_567438.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116264|ref|XP_773086.1| hypothetical protein CNBJ0810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255707|gb|EAL18439.1| hypothetical protein CNBJ0810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229488|gb|AAW45921.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 195
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--------RDADDPLKTTDQTRQLGLI 102
++V L GR + G + YD+ +N VL E EF +++P TT Q R LGL+
Sbjct: 9 LKVTLNDGRSLVGQMLAYDKHMNFVLAECEEFRTVKGKKAKASSNEPAPTTQQKRTLGLV 68
Query: 103 VCRGTAVMLVS 113
+ RG ++ VS
Sbjct: 69 ILRGETIVSVS 79
>gi|154149642|ref|YP_001403260.1| like-Sm ribonucleoprotein, core [Methanoregula boonei 6A8]
gi|153998194|gb|ABS54617.1| Like-Sm ribonucleoprotein, core [Methanoregula boonei 6A8]
Length = 76
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +LDL + V V L GGR++ G L+GYD +NLVLD+A E
Sbjct: 1 MTKRPLDILDLV-LNRQPVIVSLKGGREIRGVLQGYDVHMNLVLDKAEE---------TE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSPT 115
Q ++G ++ RG V+ +SP+
Sbjct: 51 NGQVVKVGTLIVRGDNVIYISPS 73
>gi|317146114|ref|XP_001821302.2| small nuclear ribonucleoprotein SmB [Aspergillus oryzae RIB40]
gi|391869223|gb|EIT78425.1| U1 snRNP component [Aspergillus oryzae 3.042]
Length = 219
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF R A+ PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGPANAPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
+++ R LGL + RGT V+ S
Sbjct: 69 SEEKRTLGLTIVRGTHVVSCS 89
>gi|383857174|ref|XP_003704080.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Megachile
rotundata]
Length = 103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E + + +T ++
Sbjct: 17 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRT 76
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 TKRNISMLFVRGDGVILVSP 96
>gi|346325864|gb|EGX95460.1| small nuclear ribonucleoprotein SmG [Cordyceps militaris CM01]
Length = 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 10/77 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + V+L G R+V G L+GYD LN+VLD+A E R+ + K LG+
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEE-REGGNKAK-------LGM 58
Query: 102 I--VCRGTAVMLVSPTD 116
+ V RG +V+++ +
Sbjct: 59 VLKVIRGNSVVMLEAME 75
>gi|134083643|emb|CAK47035.1| unnamed protein product [Aspergillus niger]
Length = 105
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 36 RKETVLDLA---KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
+K T ++A ++++K V +L G R+V G L+GYD +N+VLDEA E K
Sbjct: 9 KKSTEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQ 60
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
+ +G+IV RG +V+++
Sbjct: 61 GGEKVAIGMIVIRGNSVVMLE 81
>gi|401399263|ref|XP_003880515.1| deha2e04510p, related [Neospora caninum Liverpool]
gi|325114925|emb|CBZ50482.1| deha2e04510p, related [Neospora caninum Liverpool]
Length = 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPL----KTTD 94
LD+ + +D V +K G R+V G L YD LN+VL + E DPL +T
Sbjct: 11 LDIVRVSLDDRVTIKCRGDREVMGKLHAYDMHLNMVLGDVEEVATTVTTDPLTGDEQTKK 70
Query: 95 QTRQLGLIVCRGTAVMLVSP 114
TR+L LI RG A++LV+P
Sbjct: 71 TTRRLPLIFLRGDAIILVAP 90
>gi|298674160|ref|YP_003725910.1| Sm ribonucleoprotein-like protein [Methanohalobium evestigatum
Z-7303]
gi|298287148|gb|ADI73114.1| Like-Sm ribonucleoprotein core [Methanohalobium evestigatum Z-7303]
Length = 72
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M R +L+ A ++ V V+L G R+ G L+GYD +NLVLD A E L
Sbjct: 1 MGNRPLDILNNA--LNTPVIVRLRGSREFRGELQGYDVHMNLVLDNAEE--------LND 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ R+LG +V RG V+ VSP
Sbjct: 51 GEIVRKLGSVVIRGDNVVYVSP 72
>gi|171186416|ref|YP_001795335.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170935628|gb|ACB40889.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 86
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++K V +L GG V GTL YD +NLVLD A E L A +P+ + G I
Sbjct: 17 LTKMLNKEVVARLKGGVAVRGTLTAYDGCMNLVLDNAAE-LDKAGEPVA------RYGRI 69
Query: 103 VCRGTAVMLVS 113
V RG+ V+ VS
Sbjct: 70 VIRGSQVIYVS 80
>gi|110755468|ref|XP_001121255.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like [Apis
mellifera]
gi|340729056|ref|XP_003402825.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform 1
[Bombus terrestris]
gi|340729058|ref|XP_003402826.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform 2
[Bombus terrestris]
gi|350401475|ref|XP_003486164.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Bombus
impatiens]
gi|380013750|ref|XP_003690912.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Apis
florea]
Length = 103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E + + +T ++
Sbjct: 17 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRT 76
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 TKRNISMLFVRGDGVILVSP 96
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 20 RVSFNLGFLKSLKMSGRK----ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLV 75
R G L++L ++ ET+ L +V+ V + GR GTLKG+DQ +N++
Sbjct: 44 RTQHEQGHLQALSNRNQRYDIHETMSGLESYVNTTVSIITADGRNFVGTLKGFDQTINII 103
Query: 76 LDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
LDE+ E + + ++ LGL + RG V ++ D
Sbjct: 104 LDESHERVYSMNAGIEQV----VLGLHIIRGDNVAVIGQLD 140
>gi|71667288|ref|XP_820595.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma cruzi strain
CL Brener]
gi|70885945|gb|EAN98744.1| U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma cruzi]
Length = 92
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L +D+ V + L G +++ G LKG+D +NLV+ A ++++A
Sbjct: 11 KKEGILALEPHLDRRVVIALEG-KEIHGILKGFDNNINLVMASAELWVKNA--------L 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
R++G V RG +++ VS D T NPF
Sbjct: 62 LRRIGACVVRGGSLVSVSSGDTTILQHNPF 91
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+D+ + + L GGRQV+G L+GYD LNLV+D A E L Q + G++V RG
Sbjct: 1 MDRRLFLHLQGGRQVSGVLRGYDMFLNLVVDNAFEEL--------GGGQRKPCGMVVIRG 52
Query: 107 TAV 109
+V
Sbjct: 53 NSV 55
>gi|345567932|gb|EGX50834.1| hypothetical protein AOL_s00054g920 [Arthrobotrys oligospora ATCC
24927]
Length = 215
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--------DADDPLKTTD 94
+A ++ ++V L RQ+TGTL +D+ +N+VL + EF R + + P +
Sbjct: 8 MANLINYRMRVTLNDSRQLTGTLLAFDKHMNVVLADTEEFRRTKRKATKSNPNAPTTEVE 67
Query: 95 QTRQLGLIVCRGTAVMLVS 113
+ R LGLI+ RG ++ +S
Sbjct: 68 EKRTLGLIILRGMTIVSLS 86
>gi|307206257|gb|EFN84322.1| U6 snRNA-associated Sm-like protein LSm3 [Harpegnathos saltator]
Length = 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E + + +T ++
Sbjct: 10 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETVTTVEIDEETYEEVYRT 69
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 70 TKRNISMLFVRGDGVILVSP 89
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L V++ V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LEPLVNRIVSIVTADGRMIVGTLKGFDQTVNLILDESHERVFSSSHGVEQV----MLGLY 60
Query: 103 VCRGTAVMLVSPTDGTDEIA 122
+ RG V +V D T + A
Sbjct: 61 IIRGDNVAVVGEVDDTTDAA 80
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|358253136|dbj|GAA52245.1| small nuclear ribonucleoprotein G [Clonorchis sinensis]
Length = 75
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLV 112
+KL G R+V GTL+G+D +N+V+++A+E +D Q ++ + V RG ++ +V
Sbjct: 18 IKLNGNREVIGTLRGFDAFMNIVINDAMEITKDG--------QQLRIDMAVIRGNSINIV 69
Query: 113 SPTD 116
D
Sbjct: 70 EAID 73
>gi|67484430|ref|XP_657435.1| U6 snRNA-associated Sm-like protein LSm3 [Entamoeba histolytica
HM-1:IMSS]
gi|56474688|gb|EAL52049.1| U6 snRNA-associated Sm-like protein LSm3, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702203|gb|EMD42886.1| U6 snrnaassociated Sm family LSm3 protein [Entamoeba histolytica
KU27]
Length = 78
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E +DL K +D V +KL GGR++ G L+ +DQ LN++L E + ++T
Sbjct: 7 EEPIDLIKLSLDDNVFIKLRGGRKLKGKLRAFDQHLNIILTNVSEMYQ---------EKT 57
Query: 97 RQLGLIVCRGTAVMLVSP 114
R ++ RG V+L+SP
Sbjct: 58 RTFPVLYIRGDLVILISP 75
>gi|218884605|ref|YP_002428987.1| Small nuclear ribonucleoprotein (snRNP)-like protein
[Desulfurococcus kamchatkensis 1221n]
gi|218766221|gb|ACL11620.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 75
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + + K V +K + G L+ +DQ LN+VLD+A E L + TR+LG I
Sbjct: 9 LEENLGKHVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNG--------STRKLGTI 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDTVVLISP 72
>gi|407038130|gb|EKE38950.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 78
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E +DL K +D V +KL GGR++ G L+ +DQ LN++L E + ++T
Sbjct: 7 EEPIDLIKLSLDDNVFIKLRGGRKLKGKLRAFDQHLNIILTNVSEIYQ---------EKT 57
Query: 97 RQLGLIVCRGTAVMLVSP 114
R ++ RG V+L+SP
Sbjct: 58 RTFPVLYIRGDLVILISP 75
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|451847192|gb|EMD60500.1| hypothetical protein COCSADRAFT_40145 [Cochliobolus sativus ND90Pr]
Length = 96
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 33 MSGRKET--VLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL---DEAVEFLRDA 86
M ++ET LDL + +D+ V VKL G R++ G L YD NLVL +E + +
Sbjct: 1 MDEKEETNEPLDLVRLCIDEIVIVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYLAEED 60
Query: 87 DDPLKTTDQT--RQLGLIVCRGTAVMLVSPTDGT 118
DD + +T +Q ++ RG +V+L++P +GT
Sbjct: 61 DDDQEPRVRTIKKQSEMLFIRGDSVVLIAPAEGT 94
>gi|288560538|ref|YP_003424024.1| LSM domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543248|gb|ADC47132.1| LSM domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 77
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 33 MSGRK--ETVLD-LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDP 89
MSG++ + LD L K V+ V +KL G R+ G LK +D +NLVLD+A E
Sbjct: 1 MSGQQNVQRPLDALGKAVNSPVLIKLKGEREFRGILKSFDLHMNLVLDDAEE-------- 52
Query: 90 LKTTDQTRQLGLIVCRGTAVMLVSP 114
L+ + R+LG ++ RG ++ +SP
Sbjct: 53 LEKGEVLRRLGTVLIRGDNIVYISP 77
>gi|50546088|ref|XP_500571.1| YALI0B06534p [Yarrowia lipolytica]
gi|49646437|emb|CAG82802.1| YALI0B06534p [Yarrowia lipolytica CLIB122]
Length = 97
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ +++K V V T GR + G L+GYDQ N++L E + D+P + D LGL
Sbjct: 4 LSGYINKPVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVD----LGLY 59
Query: 103 VCRGTAVMLVSPTD 116
+ RG + V TD
Sbjct: 60 MLRGDCIACVGETD 73
>gi|407461730|ref|YP_006773047.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045352|gb|AFS80105.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus koreensis
AR1]
Length = 78
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +++ V +KL G + + G L G+DQ +NL+LD + E + D ++ LG I
Sbjct: 10 LDESINQVVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGD--------SKGLGTI 61
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 62 VVRGDNVVMISP 73
>gi|195645046|gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 73
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVML 111
Q+K+ R V GTL+G+DQ +NLV+D VE + D+T +G++V RG +V++
Sbjct: 12 QIKMNANRVVIGTLRGFDQFMNLVVDNTVE--------VNGNDKT-DIGMVVIRGNSVVM 62
Query: 112 VS 113
+
Sbjct: 63 IE 64
>gi|261204882|ref|XP_002627178.1| small nuclear ribonucleoprotein SmB [Ajellomyces dermatitidis
SLH14081]
gi|239592237|gb|EEQ74818.1| small nuclear ribonucleoprotein SmB [Ajellomyces dermatitidis
SLH14081]
gi|239611606|gb|EEQ88593.1| small nuclear ribonucleoprotein SmB [Ajellomyces dermatitidis ER-3]
gi|327348380|gb|EGE77237.1| small nuclear ribonucleoprotein SmB [Ajellomyces dermatitidis ATCC
18188]
Length = 226
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTT--------- 93
+ ++ ++V LT GRQ+TG + +D+ +NLVL + EF R P K+T
Sbjct: 9 MQNLINYRMRVTLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKPTKSTQAPGSSTPT 68
Query: 94 ----DQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 69 LVEAEEKRTLGLTIVRGTHVVSCS 92
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LETYINRTVAIITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|238491680|ref|XP_002377077.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus flavus
NRRL3357]
gi|220697490|gb|EED53831.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus flavus
NRRL3357]
Length = 203
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKTTDQTRQLG 100
++V L GRQ+TG + +D+ +NLVL + EF R A+ PL +++ R LG
Sbjct: 1 MRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGPANAPLVESEEKRTLG 60
Query: 101 LIVCRGTAVMLVS 113
L + RGT V+ S
Sbjct: 61 LTIVRGTHVVSCS 73
>gi|374629344|ref|ZP_09701729.1| Small nuclear ribonucleoprotein, LSM family [Methanoplanus limicola
DSM 2279]
gi|373907457|gb|EHQ35561.1| Small nuclear ribonucleoprotein, LSM family [Methanoplanus limicola
DSM 2279]
Length = 75
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +LD A K V V L GGR++ G L+GYD +NLVL+ A E +
Sbjct: 1 MTKRPLEILDKA-LNQKPVIVSLKGGREIRGVLQGYDVHMNLVLENAEEEINGV------ 53
Query: 93 TDQTRQLGLIVCRGTAVMLVSPT 115
T + G ++ RG V+ +SP+
Sbjct: 54 ---TTKAGTLIVRGDNVIYISPS 73
>gi|302309857|ref|XP_002999588.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049185|emb|CAR58061.1| unnamed protein product [Candida glabrata]
Length = 94
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
G ++ GT++G+D+ +N+V+D+AVE +A + DQ +LG I+ +G + L++P +
Sbjct: 36 GIRIRGTIRGFDEFMNVVIDDAVEVPIEAKSGRELVDQGTKLGRILLKGDNITLITPIE 94
>gi|20092011|ref|NP_618086.1| small nuclear ribonucleoprotein [Methanosarcina acetivorans C2A]
gi|30173335|sp|Q8TL47.1|RUXX_METAC RecName: Full=Putative snRNP Sm-like protein
gi|19917220|gb|AAM06566.1| Sm protein [Methanosarcina acetivorans C2A]
Length = 72
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E LRD
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEE-LRDG------ 51
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ + +V RG V+ VSP
Sbjct: 52 -EVVSKFSSVVIRGDNVVYVSP 72
>gi|433638868|ref|YP_007284628.1| small nuclear ribonucleoprotein [Halovivax ruber XH-70]
gi|433290672|gb|AGB16495.1| small nuclear ribonucleoprotein [Halovivax ruber XH-70]
Length = 99
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 25 LGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
G +MSGR VL+ A D+ V+V L G + G L GYDQ +NLVL+EA
Sbjct: 12 WGVTGLFRMSGRPLDVLE-AALGDR-VRVHLKTGTEYVGELAGYDQHMNLVLEEAERTAT 69
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSP 114
P ++T + RG V+ ++P
Sbjct: 70 SETTPANGDEETSSQDTTIIRGDNVVSINP 99
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++ + V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IVRGDNVAVIGEID 74
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L FV+ V + + GR GTLKG+DQ +N+++DE+ E + TT Q LG
Sbjct: 5 LDSFVNHTVSIITSDGRNFIGTLKGFDQTINVIIDESHERV------YSTTSGVEQVMLG 58
Query: 101 LIVCRGTAVMLVSPTDGTDEIAN 123
L + RG V +V D DE+ N
Sbjct: 59 LHIIRGDNVAIVGLID--DELDN 79
>gi|21226441|ref|NP_632363.1| small nuclear ribonucleoprotein [Methanosarcina mazei Go1]
gi|452208952|ref|YP_007489066.1| snRNP Sm-like protein [Methanosarcina mazei Tuc01]
gi|30173324|sp|Q8PZZ9.1|RUXX_METMA RecName: Full=Putative snRNP Sm-like protein
gi|20904702|gb|AAM30035.1| putative snRNP Sm-like protein [Methanosarcina mazei Go1]
gi|452098854|gb|AGF95794.1| snRNP Sm-like protein [Methanosarcina mazei Tuc01]
Length = 72
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E L+
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEE--------LRE 50
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ + +V RG V+ VSP
Sbjct: 51 GEVVSKFSSVVIRGDNVVYVSP 72
>gi|121706898|ref|XP_001271668.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus clavatus
NRRL 1]
gi|119399816|gb|EAW10242.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus clavatus
NRRL 1]
Length = 219
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ +++ LT GRQ+TG + +D+ +NLVL + EF R ++ PL
Sbjct: 9 MQNLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGPSNAPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 69 AEEKRTLGLTIVRGTHVVSCS 89
>gi|321262987|ref|XP_003196212.1| hypothetical Protein CGB_I3560W [Cryptococcus gattii WM276]
gi|317462687|gb|ADV24425.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--------DADDPLKTTDQTRQLGLI 102
++V L GR + G + YD+ +N VL E EF + +P TT Q R LGL+
Sbjct: 9 LKVTLNDGRSLVGQMLAYDKHMNFVLAECEEFRTVKAKKAKGSSSEPAPTTQQKRTLGLV 68
Query: 103 VCRGTAVMLVS 113
+ RG ++ VS
Sbjct: 69 ILRGETIVSVS 79
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L+ +VDK V V GR + G LKG+DQ N++L+ VE + D + Q +GL
Sbjct: 4 LSSYVDKTVSVVTNDGRILIGILKGFDQSCNVILESTVERIFGTDVAM----QEVAVGLY 59
Query: 103 VCRGTAVMLVSPTDGTDEIANPFMQPDGA 131
V RG + ++ D E F Q A
Sbjct: 60 VLRGDDIAILGELDAEKESETDFQQIQAA 88
>gi|367051210|ref|XP_003655984.1| hypothetical protein THITE_2146609 [Thielavia terrestris NRRL 8126]
gi|347003248|gb|AEO69648.1| hypothetical protein THITE_2146609 [Thielavia terrestris NRRL 8126]
Length = 98
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 41 LDLAKFV-DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRDADDPLKTTDQT- 96
LDL + + D+ V VKL G R++ G L YD NLVL + E ++ D DD + QT
Sbjct: 15 LDLVRLLLDEVVCVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYIVDEDDDEEVKLQTV 74
Query: 97 -RQLGLIVCRGTAVMLVSPTDGT 118
++ ++ RG +V+L+SP G+
Sbjct: 75 SKKSEMLFVRGDSVVLISPHAGS 97
>gi|440294421|gb|ELP87438.1| snrnp sm protein, putative [Entamoeba invadens IP1]
Length = 79
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E +DL K +D+ V VKL G RQ+ G L+ +DQ LNLVL E E +
Sbjct: 7 EEPIDLVKLSLDEVVLVKLRGNRQLKGKLRAFDQHLNLVLTEVTETYNSV---------S 57
Query: 97 RQLGLIVCRGTAVMLVSP 114
R ++ RG V++VSP
Sbjct: 58 RDFPVLYIRGDLVVIVSP 75
>gi|262089301|gb|ACY24522.1| putative LSM domain protein [uncultured crenarchaeote 57a5]
Length = 104
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 23 FNLGFLK-SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
N+G K L+MS L + + K V VKL G R V G +KG+D+ +N+V+ +A E
Sbjct: 8 INIGLSKGKLRMSEEGIATQLLQESIGKNVLVKLKGRRSVRGKIKGFDKQMNIVITDATE 67
Query: 82 FLR---DADDPLKTTDQTRQLGLIVCRGTAVMLVS 113
+ + + K +Q Q+G + RG V+ ++
Sbjct: 68 IIEQQGNNNSEKKEQEQESQVGEALIRGDNVITIA 102
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V+ V V + GR GTLKG+DQ +N++LDE+ E + TT Q LG
Sbjct: 5 LESYVNHTVSVITSDGRNFIGTLKGFDQTINIILDESHERV------YSTTQGVEQVVLG 58
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG + +V D
Sbjct: 59 LHIIRGDNIAIVGELD 74
>gi|302855073|ref|XP_002959037.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
gi|300255603|gb|EFJ39898.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
Length = 97
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--DADDP-----LKT 92
LDL + +D+ + VKL G R++ G L YDQ LN++L E E L + DD +KT
Sbjct: 14 LDLIRLSLDERIYVKLRGERELRGRLHAYDQHLNMILGEVEETLTTVEIDDETYEEIIKT 73
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
Q R + + RG V+LVSP
Sbjct: 74 --QKRVIPFLFVRGDGVILVSP 93
>gi|255936245|ref|XP_002559149.1| Pc13g07180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583769|emb|CAP91787.1| Pc13g07180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 212
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG++ +D+ +NLVL + EF R + PL
Sbjct: 6 MQNLINYRMRVTLNDGRQMTGSMLAFDKHMNLVLADTEEFRRIKRKSKPAAGPTNAPLVE 65
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 66 AEEKRSLGLTIVRGTQVVSCS 86
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V+ V + + GR GTLKG+DQ +N++LDE+ E + TT Q LG
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERV------YSTTQGVEQVVLG 58
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V +V D
Sbjct: 59 LHIIRGDNVAIVGELD 74
>gi|303323787|ref|XP_003071885.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240111587|gb|EER29740.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 67
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + +++ G R+V G L+GYD +N+VLDEA+E
Sbjct: 7 ELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIE 46
>gi|405122609|gb|AFR97375.1| smb [Cryptococcus neoformans var. grubii H99]
Length = 160
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF--------LRDADDPLKTTDQTRQLGLI 102
++V L GR + G + YD+ +N VL E EF +++P TT Q R LGL+
Sbjct: 9 LKVTLNDGRSLVGQMLAYDKHMNFVLAECEEFRTVKGKKSKSSSNEPAPTTQQKRTLGLV 68
Query: 103 VCRGTAVMLVS 113
+ RG ++ VS
Sbjct: 69 ILRGETIVSVS 79
>gi|255087196|ref|XP_002505521.1| predicted protein [Micromonas sp. RCC299]
gi|226520791|gb|ACO66779.1| predicted protein [Micromonas sp. RCC299]
Length = 95
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--DADDP-----LKT 92
LDL + +D+ V VKL G R++ G L YDQ LN++L + E + + DD +KT
Sbjct: 12 LDLIRLSLDERVYVKLRGEREIRGKLHAYDQHLNMILGDVEETITTVEIDDETYEEIIKT 71
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
T R + + RG AV LVSP
Sbjct: 72 T--KRAVRFLFVRGDAVTLVSP 91
>gi|388580102|gb|EIM20419.1| like-Sm ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 89
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +++ ++VKL G R++ G L YD +NL+L EF+ D T + T
Sbjct: 9 LDLVRLSLNEQIKVKLRGDRELIGVLHAYDSHMNLILGNVDEFVTVVDVDSTTLESTTRF 68
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+L+SP
Sbjct: 69 VKRSMPMLYIRGDGVILISP 88
>gi|14600779|ref|NP_147300.1| small nucleolar RNP protein Sm [Aeropyrum pernix K1]
gi|10720267|sp|Q9YEQ5.1|RUXX_AERPE RecName: Full=Putative snRNP Sm-like protein
gi|5104175|dbj|BAA79491.1| small nucleolar RNP protein Sm [Aeropyrum pernix K1]
Length = 77
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCR 105
+VD V VKL G ++ G LK YDQ LN++L +A E R+LGL + R
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDAEEI---------GETSIRRLGLTLVR 66
Query: 106 GTAVMLVSP 114
G +V++++P
Sbjct: 67 GDSVVVITP 75
>gi|403214565|emb|CCK69066.1| hypothetical protein KNAG_0B06380 [Kazachstania naganishii CBS
8797]
Length = 83
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQ 95
ET L+L K +D+ V VKL G R + GTL+ +D N+VL +AVE + D L++T++
Sbjct: 3 ETPLNLLKLNLDERVYVKLRGARSMAGTLQAFDSHCNIVLSDAVETRYELVDGELRSTER 62
Query: 96 TRQLGLIVCRGTAVMLV-SPTD 116
+ ++ RG +V LV +P D
Sbjct: 63 PSE--MVFVRGDSVTLVTTPED 82
>gi|281346695|gb|EFB22279.1| hypothetical protein PANDA_002886 [Ailuropoda melanoleuca]
Length = 50
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCR 105
VKL GGR V G L+G+D +NLV+DE VE + T+ Q +G++V +
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVE--------MATSGQQNNIGMVVSK 45
>gi|268552449|ref|XP_002634207.1| C. briggsae CBR-LSM-3 protein [Caenorhabditis briggsae]
Length = 102
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--RD 85
K + +S E LDL + +D+ V VK+ R++ G L+ +DQ LN+VL E E + R+
Sbjct: 6 KEVTLSATVEEPLDLLRLSLDEKVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTRE 65
Query: 86 ADDPL--KTTDQTRQ-LGLIVCRGTAVMLVSP 114
D+ + Q+++ + ++ RG +V+LVSP
Sbjct: 66 VDEDTFEEIYRQSKRVVPMLFVRGDSVILVSP 97
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V+K V V + GR + GTLKG+DQ NL+LDE+ E + + ++ LGL
Sbjct: 5 LEDYVNKTVSVITSDGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG + +V D
Sbjct: 61 IIRGDNIAVVGEID 74
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + ++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYTNRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIGEDTDSSLDLGNIRAEP 90
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V+ V + + GR GTLKG+DQ +NL+LDE+ E + TT Q LG
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERV------YSTTQGVEQVVLG 58
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V ++ D
Sbjct: 59 LHIIRGDNVAVIGELD 74
>gi|425777864|gb|EKV16020.1| Small nuclear ribonucleoprotein-associated protein B [Penicillium
digitatum PHI26]
gi|425782633|gb|EKV20532.1| Small nuclear ribonucleoprotein-associated protein B [Penicillium
digitatum Pd1]
Length = 211
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG++ +D+ +NLVL + EF R + PL
Sbjct: 6 MQNLINYRMRVTLNDGRQMTGSMLAFDKHMNLVLADTEEFRRIKRKSKPAAGPTNAPLVE 65
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 66 AEEKRSLGLTIVRGTQVVSCS 86
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVATVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ RG V ++ TD + ++ N +P
Sbjct: 61 IVRGDNVAVIGEIDEDTDSSLDLGNIRAEP 90
>gi|74025842|ref|XP_829487.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei TREU927]
gi|9837172|gb|AAG00460.1|AF280392_1 Sm-G [Trypanosoma brucei]
gi|70834873|gb|EAN80375.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261335490|emb|CBH18484.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei gambiense
DAL972]
Length = 82
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
K+ + +L F++K V+VKLT GR ++G L+G D+ +++VL +AV+ ++ D+T
Sbjct: 4 KKRIANLNHFMEKRVKVKLTSGRSISGELRGVDEFMSIVLYDAVDET-PTSGTVENEDKT 62
Query: 97 RQLGLIVCRGTAVM 110
LG V RG ++
Sbjct: 63 -SLGTAVVRGAMIV 75
>gi|156937769|ref|YP_001435565.1| like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
gi|156566753|gb|ABU82158.1| Like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
Length = 73
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
+A+ + K V VKL G+ V G LK +D LN+VL++A E DQTR LG I
Sbjct: 9 MAEAIGKIVLVKLRDGK-VRGRLKTFDMHLNIVLEDAEEV---------REDQTRPLGTI 58
Query: 103 VCRGTAVMLVSPTD 116
+ RG V+ VSP +
Sbjct: 59 LIRGDGVVFVSPVE 72
>gi|124484977|ref|YP_001029593.1| hypothetical protein Mlab_0149 [Methanocorpusculum labreanum Z]
gi|124362518|gb|ABN06326.1| Like-Sm ribonucleoprotein, core [Methanocorpusculum labreanum Z]
Length = 75
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V + L GGR++ G L+GYD +NLVLD+A E + + T LG ++ RG V+
Sbjct: 18 VIISLKGGREIRGVLQGYDVHMNLVLDKAEE---------EGENGTVSLGTLIVRGDNVI 68
Query: 111 LVSPT 115
+SP+
Sbjct: 69 YISPS 73
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
+Q+KL R V GTL+G+DQ +NLV+D +E + +G++V RG +V+
Sbjct: 34 LQIKLNANRVVVGTLRGFDQFMNLVIDNTMEV---------NGNDKNDIGMVVIRGNSVV 84
Query: 111 LV 112
++
Sbjct: 85 MI 86
>gi|401827282|ref|XP_003887733.1| Sm-like protein [Encephalitozoon hellem ATCC 50504]
gi|392998740|gb|AFM98752.1| Sm-like protein [Encephalitozoon hellem ATCC 50504]
Length = 79
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ-- 98
L+L K+++ V+V++ GR + GT+ D+ +N VLD+ EF R +K + +TR+
Sbjct: 3 LNLEKYMNYRVKVRMRDGRWMEGTMMAIDEDVNAVLDDTEEFRR-----MKGSKETRRRT 57
Query: 99 LGLIVCRG 106
LGL+V RG
Sbjct: 58 LGLVVVRG 65
>gi|328872794|gb|EGG21161.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 97
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 34 SGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
G E LDL + +D+ + VK+ R++ G L YDQ LN++L + E +R + +T
Sbjct: 6 EGTIEEPLDLIRLSLDERIFVKMRQDRELRGKLHAYDQHLNMILSDVEETIRVVEKDEET 65
Query: 93 TDQ-----TRQLGLIVCRGTAVMLVSP 114
++ R++ ++ RG V+L+SP
Sbjct: 66 DEEIVKSIKRKIKMLFVRGDGVILISP 92
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLG 100
+ LA+FV++ V+V GR V G+L+G+DQ NL+L + E L D + LG
Sbjct: 1 MSLAEFVEQQVEVITNDGRCVLGSLRGFDQTTNLILSNSKERLISWDQETEVIP----LG 56
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V +V D
Sbjct: 57 LYIIRGENVAMVGLVD 72
>gi|91087977|ref|XP_973274.1| PREDICTED: similar to LSM Sm-like protein family member [Tribolium
castaneum]
gi|270011905|gb|EFA08353.1| hypothetical protein TcasGA2_TC005996 [Tribolium castaneum]
Length = 101
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +D+ + VK+ R++ G L YDQ +N++L +A E + + +T ++
Sbjct: 17 LDLVRLSLDERIYVKMRNDREIRGRLHAYDQHMNMILSDAEETITTVEIDEETYEEVYRT 76
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 TKRNIPMLFVRGDGVILVSP 96
>gi|126654168|ref|XP_001388399.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117492|gb|EAZ51592.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 62
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ-LGLIVCRGTAVML 111
VKL G RQ+ G+L+GYD +NLVL+ E L D T++ +G V RG +V++
Sbjct: 4 VKLNGNRQIIGSLRGYDNFMNLVLENTTEVL----------DSTKKSIGTTVIRGNSVIM 53
Query: 112 VSPTD 116
D
Sbjct: 54 WECID 58
>gi|412991139|emb|CCO15984.1| predicted protein [Bathycoccus prasinos]
Length = 97
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 44 AKFVDKGVQVKL-----TGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
++ VDK V K+ G ++ TGTLKG+D +N VL++A+E+ RD + +T T+
Sbjct: 20 SELVDKCVNEKVWIIMKNGHKEFTGTLKGFDVYVNCVLEDAIEYDRDQESGKET---TKN 76
Query: 99 LGLIVCRGTAVMLVSP 114
L I+ G + ++ P
Sbjct: 77 LESILLNGNNICMIVP 92
>gi|281350538|gb|EFB26122.1| hypothetical protein PANDA_000104 [Ailuropoda melanoleuca]
Length = 57
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
KF+DK + +KL GGR + G L+ ++ +NLV+DE E + T++Q G++V
Sbjct: 2 KFMDKKLSLKLNGGRHIQGILQEFNPFMNLVIDECTE--------MATSEQQNNTGMVVT 53
Query: 105 RGT 107
G
Sbjct: 54 GGN 56
>gi|159479600|ref|XP_001697878.1| Sm protein [Chlamydomonas reinhardtii]
gi|158273976|gb|EDO99761.1| Sm protein [Chlamydomonas reinhardtii]
Length = 97
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--DADDP-----LKT 92
LDL + +D+ + VKL G R++ G L YDQ LN++L E E L + DD +KT
Sbjct: 14 LDLIRLSLDERIYVKLRGERELRGRLHAYDQHLNMILGEVEETLTTVEIDDETYEEIIKT 73
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
Q R + + RG ++LVSP
Sbjct: 74 --QKRVIPFLFVRGDGIILVSP 93
>gi|405118137|gb|AFR92912.1| hypothetical protein CNAG_00781 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD-----DPLKTTD 94
LDL K + + V +KL G R VTG L YD +N+V+ +A E + D PL
Sbjct: 13 LDLVKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHIVDVTEEGQPLPPRV 72
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
+ R ++ RG V+L+SP +
Sbjct: 73 ERRSAEMLFVRGDGVILLSPAE 94
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V ++ D
Sbjct: 61 IERGDNVAVIGEID 74
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L VD+ + V GR + G LKG+DQ N++LDE+ E + K Q LGL
Sbjct: 7 LESLVDQNISVITNDGRNIVGILKGFDQATNIILDESHERVYST----KEGVQLHVLGLY 62
Query: 103 VCRGTAVMLVSPTD 116
+ RG + +V D
Sbjct: 63 IIRGDNISIVGELD 76
>gi|388579558|gb|EIM19880.1| DUF21-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 625
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+L K++DK V V L R+VTG L+G+D LNLVLD+A
Sbjct: 9 ELKKYMDKRVLVHLQANRKVTGQLRGFDLFLNLVLDDA 46
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ---L 99
L +V+ V + GR GTLKG+DQ LN++LD D+ + + +T+Q + L
Sbjct: 4 LESYVNHIVTIITADGRHFVGTLKGFDQTLNVILD-------DSHERVYSTNQGVEQVVL 56
Query: 100 GLIVCRGTAVMLVSPTDGT 118
GL + RG V++V D T
Sbjct: 57 GLHIIRGDNVVIVGEIDET 75
>gi|448377944|ref|ZP_21560567.1| Like-Sm ribonucleoprotein core [Halovivax asiaticus JCM 14624]
gi|445654917|gb|ELZ07766.1| Like-Sm ribonucleoprotein core [Halovivax asiaticus JCM 14624]
Length = 99
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 25 LGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
G +MSGR VL+ A D+ V+V L G + G L GYDQ +NLVL+EA
Sbjct: 12 WGVTGLFRMSGRPLDVLE-AALGDR-VRVNLKTGTEYVGELAGYDQHMNLVLEEAERTAT 69
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSP 114
P ++T + RG V+ ++P
Sbjct: 70 SETAPADGDEETSSQDTTIIRGDNVVSINP 99
>gi|358057697|dbj|GAA96462.1| hypothetical protein E5Q_03129 [Mixia osmundae IAM 14324]
Length = 79
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
K + +L K++DK + V L G R+++G L+G+D LNLVLDEA
Sbjct: 3 KASQPELKKYMDKRIFVNLQGNRKISGVLRGFDIFLNLVLDEA 45
>gi|281200512|gb|EFA74730.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 99
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD 87
+S K G E LDL + +D+ + VK+ R++ G L YDQ LN++L E ++ +
Sbjct: 3 QSKKEEGSIEEPLDLIRLSLDERIFVKMRQDRELRGKLHAYDQHLNMILSNVEETIKVVE 62
Query: 88 DPLKTTDQ-----TRQLGLIVCRGTAVMLVSP 114
+T ++ R + ++ RG V+L+SP
Sbjct: 63 KDEETDEEIVKNIKRNIDMLFVRGDGVILISP 94
>gi|390336863|ref|XP_001199475.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Strongylocentrotus purpuratus]
Length = 90
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V V GRQ+ GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYVNHTVSVITNDGRQIVGTLKGFDQTINLILDESHE 43
>gi|401625929|gb|EJS43908.1| smx2p [Saccharomyces arboricola H-6]
Length = 77
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK + + + G R++ G L+GYD LN+VLD+A+E + LGL
Sbjct: 6 ELKKYMDKKILLNVNGSRKIAGILRGYDIFLNVVLDDAMEINGE------NAANNHPLGL 59
Query: 102 -IVCRGTAVMLVSPTD 116
V RG +++ + D
Sbjct: 60 QTVIRGNSIISLEALD 75
>gi|145592526|ref|YP_001154528.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM 13514]
gi|379005495|ref|YP_005261167.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum oguniense
TE7]
gi|145284294|gb|ABP51876.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160948|gb|AFA40560.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum oguniense
TE7]
Length = 86
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++K + KL GG + G L YD +NLVLD A E L ++ +P +TR G I
Sbjct: 17 LTKMLNKEIVAKLKGGVAIKGVLTAYDGCMNLVLDSAAE-LDNSGEP-----KTR-YGRI 69
Query: 103 VCRGTAVMLVS 113
V RG+ V+ VS
Sbjct: 70 VVRGSQVIYVS 80
>gi|60692640|gb|AAX30638.1| SJCHGC06306 protein [Schistosoma japonicum]
gi|226485693|emb|CAX75266.1| putative small nuclear ribonucleoprotein G [Schistosoma japonicum]
gi|226485695|emb|CAX75267.1| putative small nuclear ribonucleoprotein G [Schistosoma japonicum]
gi|226485697|emb|CAX75268.1| putative small nuclear ribonucleoprotein G [Schistosoma japonicum]
Length = 76
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++DK +++KL R+V G L+G+D +N+V+ +A E +D ++ +
Sbjct: 8 ELKKYLDKRLRLKLNANREVVGILRGFDAFMNIVVSDAYEVTKDGTQI--------KIDM 59
Query: 102 IVCRGTAVMLVSPTD 116
V RG ++ +V D
Sbjct: 60 AVVRGNSINIVEGVD 74
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVML 111
VKL R V GTL+G+DQ +NLV+D VE + D+T +G++V RG +V++
Sbjct: 13 SVKLNANRVVIGTLRGFDQFMNLVIDNTVE--------VNGNDKT-DIGMVVIRGNSVVM 63
Query: 112 V 112
+
Sbjct: 64 I 64
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L +V+ V + + GR GTLKG+DQ +N++LDE+ E + TT Q LG
Sbjct: 11 LESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERV------YSTTQGVEQVVLG 64
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V +V D
Sbjct: 65 LHIIRGDNVAIVGELD 80
>gi|156089511|ref|XP_001612162.1| LSM domain containing protein [Babesia bovis]
gi|154799416|gb|EDO08594.1| LSM domain containing protein [Babesia bovis]
Length = 89
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD-DPLK----TTDQTRQLGL 101
+D+ V +K GGR++ G L YD+ N++L +A+E + DP TT ++ G+
Sbjct: 13 LDERVYLKCKGGREIVGQLHAYDEHCNMLLSDAIETFTSVELDPTTNQEVTTITSKDSGV 72
Query: 102 IVCRGTAVMLVSPTDGT 118
+ RG A++L+S + T
Sbjct: 73 VFVRGDALILLSHANST 89
>gi|258568848|ref|XP_002585168.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906614|gb|EEP81015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 98
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRDADDPLKTTDQTRQL 99
+ L +++K V + GR +TGTL DQL NLVL E VE +R DDP +++
Sbjct: 1 MSLQAYINKKVLILTVDGRTLTGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDH-- 58
Query: 100 GLIVCRGTAVMLVSPTD 116
GL + RG V++ D
Sbjct: 59 GLYLIRGDNVVICGEID 75
>gi|254567409|ref|XP_002490815.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|238030611|emb|CAY68535.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|328351196|emb|CCA37596.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris CBS
7435]
Length = 77
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L K++ + VK+ GRQ+ G L GYD LNL LD+ V+ +P + T +G
Sbjct: 7 ELKKYLHHRISVKINAGRQIEGLLTGYDVFLNLTLDDCVQV-----NPSNRAEDT-PVGS 60
Query: 102 IVCRGTAVM 110
V RG +V+
Sbjct: 61 CVLRGNSVI 69
>gi|291001751|ref|XP_002683442.1| predicted protein [Naegleria gruberi]
gi|284097071|gb|EFC50698.1| predicted protein [Naegleria gruberi]
Length = 89
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L +++K + VK+ G R V GT+ G+D +N+ L+ A + + T ++T LG
Sbjct: 9 ELKVYMNKRLSVKMNGKRHVEGTMIGFDPFMNITLENAYDLTGFSKGEANTNEKT-HLGT 67
Query: 102 IVCRGTAVMLVSPTD 116
+V RG ++ ++ D
Sbjct: 68 VVVRGNSIEMMECLD 82
>gi|167375897|ref|XP_001733767.1| snrnp sm protein [Entamoeba dispar SAW760]
gi|165904941|gb|EDR30063.1| snrnp sm protein, putative [Entamoeba dispar SAW760]
Length = 99
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E +DL K +D + +KL GGR++ G L+ +DQ LN++L + E + ++T
Sbjct: 28 EEPIDLIKLSLDDNIFIKLRGGRKLKGKLRAFDQHLNIILTDVNETYQ---------EKT 78
Query: 97 RQLGLIVCRGTAVMLVSP 114
R ++ RG V+L+SP
Sbjct: 79 RTFPVLYVRGDLVVLISP 96
>gi|303288678|ref|XP_003063627.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454695|gb|EEH52000.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 95
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--DADDP-----LKT 92
LDL + +D+ V VKL G R++ G L YDQ LN++L + E + + DD +KT
Sbjct: 12 LDLIRLSLDERVYVKLRGDREIRGKLHAYDQHLNMILGDVEETITTVEIDDETYEEIVKT 71
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
T R + + RG AV LVSP
Sbjct: 72 T--KRAVRYLFVRGDAVTLVSP 91
>gi|386002644|ref|YP_005920943.1| Small nuclear ribonucleoprotein, LSM family [Methanosaeta
harundinacea 6Ac]
gi|357210700|gb|AET65320.1| Small nuclear ribonucleoprotein, LSM family [Methanosaeta
harundinacea 6Ac]
Length = 72
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V VKL GR G L+GYD +NLVLD E +R+ +D +++LG +V RG V+
Sbjct: 17 VIVKLKDGRAFRGELQGYDIHMNLVLDNT-EEIREGED-------SKKLGTVVVRGDNVV 68
Query: 111 LVSP 114
+SP
Sbjct: 69 YISP 72
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 249 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 304
Query: 103 VCRGTAV 109
+ RG V
Sbjct: 305 IVRGDNV 311
>gi|397779277|ref|YP_006543750.1| Sm ribonucleoprotein [Methanoculleus bourgensis MS2]
gi|396937779|emb|CCJ35034.1| Sm ribonucleoprotein [Methanoculleus bourgensis MS2]
Length = 75
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V + L GGR++ G L+GYD +NLVLD+A E + A ++LG ++ RG V+
Sbjct: 18 VIISLKGGREIRGVLQGYDVHMNLVLDKAEEEMDGA---------VQKLGTLIVRGDNVI 68
Query: 111 LVSPT 115
++P+
Sbjct: 69 YITPS 73
>gi|353234582|emb|CCA66606.1| probable LSM3-U6 snRNA-associated Sm-like protein [Piriformospora
indica DSM 11827]
Length = 94
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 31 LKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL---DEAVEFLRDA 86
+++SG + DL + + + V VKL G RQ++G L YD +N++L +E V +
Sbjct: 1 MQVSGEIQEPFDLIRLSLSERVMVKLRGDRQLSGVLHAYDGHMNMILSDVEETVMIVDPV 60
Query: 87 DDPLKTTDQT--RQLGLIVCRGTAVMLVSP 114
+ +K + + RQ+ ++ RG V+LVSP
Sbjct: 61 PEGVKPSIRVAKRQIEMLYVRGDGVILVSP 90
>gi|390939095|ref|YP_006402833.1| Sm ribonucleoprotein-like protein [Desulfurococcus fermentans DSM
16532]
gi|390192202|gb|AFL67258.1| Like-Sm ribonucleoprotein core [Desulfurococcus fermentans DSM
16532]
Length = 75
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + + K V +K + G L+ +DQ LN+VLD+A E L + TR+LG +
Sbjct: 9 LEENLGKQVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNG--------STRKLGTV 60
Query: 103 VCRGTAVMLVSP 114
V RG V+L+SP
Sbjct: 61 VIRGDTVVLISP 72
>gi|307354786|ref|YP_003895837.1| small nuclear riboprotein-like protein [Methanoplanus petrolearius
DSM 11571]
gi|307158019|gb|ADN37399.1| Like-Sm ribonucleoprotein core [Methanoplanus petrolearius DSM
11571]
Length = 75
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 92
M+ R +LD A K V V L GGR++ G L+GYD +NLVL+ A E +
Sbjct: 1 MTKRPLEILDQA-LNQKPVIVSLKGGREIRGILQGYDVHMNLVLENAEEEINGV------ 53
Query: 93 TDQTRQLGLIVCRGTAVMLVSPT 115
+ G ++ RG V+ +SP+
Sbjct: 54 ---IKNQGTLIVRGDNVIYISPS 73
>gi|225713400|gb|ACO12546.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus salmonis]
Length = 105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E LDL + +D+ + VK+ R++ G L YDQ LN++L E E + + +T ++
Sbjct: 17 EEPLDLIRLSLDERIYVKMRNERELKGRLNAYDQHLNMILGEVAETVTSIEIDEETYEEV 76
Query: 97 -----RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 YRTTKRNIPMLFVRGDGVILVSP 99
>gi|170588931|ref|XP_001899227.1| U6 snRNA-associated Sm-like protein LSm3 [Brugia malayi]
gi|158593440|gb|EDP32035.1| U6 snRNA-associated Sm-like protein LSm3, putative [Brugia malayi]
Length = 136
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----DADDPLKT 92
E LDL + +D+ + VK+ R+V G L +DQ LN++L + E + D ++ +
Sbjct: 49 EEPLDLIRLSLDERIYVKMRNDREVRGRLHAFDQHLNMILSQVEETVTTVELDEENFEEM 108
Query: 93 TDQT-RQLGLIVCRGTAVMLVSP 114
QT RQ+ ++ RG A++LV+P
Sbjct: 109 HKQTKRQIPMLFVRGDAIILVAP 131
>gi|325183158|emb|CCA17616.1| U6 snRNAassociated Smlike protein LSm3 putative [Albugo laibachii
Nc14]
Length = 92
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL K + + + VK G R++ G L YDQ LN+VL E E + + +T ++
Sbjct: 8 LDLVKLSIGERIYVKCRGDRELRGLLHAYDQHLNMVLSEVEETVTVQELDEETYEEIIKQ 67
Query: 97 --RQLGLIVCRGTAVMLVSP 114
RQ+ ++ RG AV+LV+P
Sbjct: 68 SKRQVEMLFIRGDAVILVAP 87
>gi|395818964|ref|XP_003782876.1| PREDICTED: uncharacterized protein LOC100942869 [Otolemur
garnettii]
Length = 450
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
+DK + +KL GGR V G +G+D +NLV+DE VE + T+ Q + ++V G
Sbjct: 1 MDKKLSLKLNGGRHVQGISRGFDSSVNLVIDECVE--------MATSGQQNTIRMVVIGG 52
Query: 107 TAVMLV 112
+ L+
Sbjct: 53 NGISLL 58
>gi|321250515|ref|XP_003191834.1| sm-like protein [Cryptococcus gattii WM276]
gi|317458301|gb|ADV20047.1| Sm-like protein, putative [Cryptococcus gattii WM276]
Length = 95
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD-----DPLKTTD 94
LDL K + + V +KL G R VTG L YD +N+V+ +A E + D PL
Sbjct: 13 LDLVKLALGERVLIKLRGDRIVTGILHAYDAHMNVVVSQAEESIHIIDVTEEGQPLPPRT 72
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
+ R ++ RG V+L+SP +
Sbjct: 73 ERRNAEMLFVRGDGVILLSPAE 94
>gi|312074108|ref|XP_003139822.1| U6 snRNA-associated Sm-like protein LSm3 [Loa loa]
Length = 136
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----DADDPLKT 92
E LDL + +D+ + VK+ R+V G L +DQ LN++L + E + D ++ +
Sbjct: 49 EEPLDLIRLSLDERIYVKMRNDREVRGRLHAFDQHLNMILSQVEETVTTVELDEENFEEM 108
Query: 93 TDQT-RQLGLIVCRGTAVMLVSP 114
QT RQ+ ++ RG A++LV+P
Sbjct: 109 HKQTKRQIPMLFVRGDAIILVAP 131
>gi|393909110|gb|EJD75322.1| hypothetical protein LOAG_17508 [Loa loa]
Length = 103
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----DADDPLKT 92
E LDL + +D+ + VK+ R+V G L +DQ LN++L + E + D ++ +
Sbjct: 16 EEPLDLIRLSLDERIYVKMRNDREVRGRLHAFDQHLNMILSQVEETVTTVELDEENFEEM 75
Query: 93 TDQT-RQLGLIVCRGTAVMLVSP 114
QT RQ+ ++ RG A++LV+P
Sbjct: 76 HKQTKRQIPMLFVRGDAIILVAP 98
>gi|145256987|ref|XP_001401581.1| small nuclear ribonucleoprotein SmB [Aspergillus niger CBS 513.88]
gi|134058491|emb|CAL00700.1| unnamed protein product [Aspergillus niger]
Length = 220
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF R + PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGSTNAPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 69 AEEKRTLGLTIVRGTHVVSCS 89
>gi|58259393|ref|XP_567109.1| Sm-like protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134107471|ref|XP_777620.1| hypothetical protein CNBA7410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260314|gb|EAL22973.1| hypothetical protein CNBA7410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223246|gb|AAW41290.1| Sm-like protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 95
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDAD-----DPLKTTD 94
LDL K + + V +KL G R VTG L YD +N+V+ +A E + D PL
Sbjct: 13 LDLVKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEGQPLPPRI 72
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
+ R ++ RG V+L+SP +
Sbjct: 73 ERRTAEMLFVRGDGVILLSPAE 94
>gi|412991245|emb|CCO16090.1| U6 snRNA-associated Sm-like protein LSm3 [Bathycoccus prasinos]
Length = 114
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF--LRDADDPLKTT---D 94
LDL + +D+ V VKL R++ G L YDQ LN++L E E +R+ D+
Sbjct: 30 LDLVRLSLDERVYVKLRNDRELRGKLHSYDQHLNMLLGEVEEITTIREVDEETYEEIIKS 89
Query: 95 QTRQLGLIVCRGTAVMLVSPTD 116
R + + RG AV L+SP +
Sbjct: 90 NKRSVPYLFVRGDAVTLISPHE 111
>gi|388851843|emb|CCF54437.1| probable LSM3-U6 snRNA-associated Sm-like protein [Ustilago hordei]
Length = 109
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
DL + + + V VKL G R++ GTL YD +NL+L + E + D +T +T
Sbjct: 26 FDLIRLSISERVYVKLRGDRELRGTLHAYDGHMNLILGDVEETIYVVDINEETGKETVRV 85
Query: 97 --RQLGLIVCRGTAVMLVSPTDGT 118
RQ ++ RG +V+LVSP T
Sbjct: 86 VKRQSEMLFVRGDSVILVSPPSST 109
>gi|340370917|ref|XP_003383992.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like
[Amphimedon queenslandica]
Length = 105
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 35 GRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE------AVEFLRDAD 87
G E LDL + +D+ + VK+ R++TG L G+DQ LN+++ E +E +
Sbjct: 12 GDIEEPLDLVRLSLDERLYVKMRNDRELTGRLHGFDQHLNMIMSEVEETVTTLELDEETF 71
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVSPT 115
+ + T Q R + +I RG V+L+SP+
Sbjct: 72 EEIYRTTQ-RTIPMIFIRGDGVILISPS 98
>gi|71027589|ref|XP_763438.1| U6 snRNA-associated Sm-like protein LSm8 [Theileria parva strain
Muguga]
gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria
parva]
Length = 94
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +F++ V V GR G LKG+DQL NLVL +E + D P++ +LG+
Sbjct: 5 LEQFIECSVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEEL----ELGIY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG ++LV D
Sbjct: 61 LLRGDNIVLVGEVD 74
>gi|358366072|dbj|GAA82693.1| hypothetical protein AKAW_00808 [Aspergillus kawachii IFO 4308]
Length = 220
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF R + PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKSKPAAGSTNAPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 69 AEEKRTLGLTIVRGTHVVSCS 89
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V++ V V + GR G LKG+DQ +NL++D++ E + + ++ QLGL
Sbjct: 5 LDSYVNRSVCVITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQV----QLGLH 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V+L+ D
Sbjct: 61 IIRGDNVVLIGEID 74
>gi|259482702|tpe|CBF77432.1| TPA: small nuclear ribonucleoprotein SmB, putative (AFU_orthologue;
AFUA_4G07740) [Aspergillus nidulans FGSC A4]
Length = 196
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--------DADDPLKTTDQTRQLGLI 102
++V L GRQ+TG + +D+ +NLVL + EF R + PL ++ R LGL
Sbjct: 1 MRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKAKSAPGNAPLVEAEEKRTLGLT 60
Query: 103 VCRGTAVMLVS 113
+ RGT V+ S
Sbjct: 61 IVRGTHVVSCS 71
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +D V V GR + GTL+G+DQ+ N++L++ E + ++ ++ LG+
Sbjct: 6 LTNMLDARVSVITNDGRHIVGTLRGFDQVTNVILEDCAERVYSSESGVEEA----PLGVY 61
Query: 103 VCRGTAVMLVSPTD 116
+ RG V LV P D
Sbjct: 62 MIRGDNVALVGPVD 75
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ--LG 100
L ++++ V V ++ R + GTLKG+DQ +NL LDE+ E+L ++ Q LG
Sbjct: 40 LENYINRIVDVIISDVRTIVGTLKGFDQTINLTLDESHEWLV-----FSSSQGVEQVVLG 94
Query: 101 LIVCRGTAVMLVSPTD 116
L + RG V ++ D
Sbjct: 95 LYIVRGDNVAVIGERD 110
>gi|390981129|pdb|4EMG|A Chain A, Crystal Structure Of Splsm3
gi|390981130|pdb|4EMG|B Chain B, Crystal Structure Of Splsm3
gi|390981131|pdb|4EMG|C Chain C, Crystal Structure Of Splsm3
gi|390981132|pdb|4EMG|D Chain D, Crystal Structure Of Splsm3
gi|390981133|pdb|4EMG|E Chain E, Crystal Structure Of Splsm3
gi|390981134|pdb|4EMG|F Chain F, Crystal Structure Of Splsm3
gi|390981135|pdb|4EMG|G Chain G, Crystal Structure Of Splsm3
gi|390981136|pdb|4EMG|H Chain H, Crystal Structure Of Splsm3
gi|390981137|pdb|4EMG|I Chain I, Crystal Structure Of Splsm3
gi|390981138|pdb|4EMG|J Chain J, Crystal Structure Of Splsm3
gi|390981139|pdb|4EMG|K Chain K, Crystal Structure Of Splsm3
gi|390981140|pdb|4EMG|L Chain L, Crystal Structure Of Splsm3
gi|390981141|pdb|4EMG|M Chain M, Crystal Structure Of Splsm3
gi|390981142|pdb|4EMG|N Chain N, Crystal Structure Of Splsm3
Length = 93
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-------RDADDPLKT 92
LDL + +D+ V VKL G R++ G L YD+ LN VL +A E + D D LKT
Sbjct: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNXVLGDAEEIVTIFDDEETDKDKALKT 70
Query: 93 TDQTRQLGLIVCRGTAVMLVSP 114
+ + RG +V+L++P
Sbjct: 71 I--RKHYEXLFVRGDSVILIAP 90
>gi|302309894|ref|XP_002999599.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049204|emb|CAR58072.1| unnamed protein product [Candida glabrata]
Length = 85
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 39 TVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQT 96
T LDL K +D+ V VKL G R + G L+ +D N+VL +AVE + + D LK+ Q
Sbjct: 5 TPLDLLKLNLDERVYVKLRGARAMEGVLQAFDSHCNIVLSDAVETIYELVDGELKS--QE 62
Query: 97 RQLGLIVCRGTAVMLVSP 114
R +I RG +V L++
Sbjct: 63 RASEMIFVRGDSVTLITA 80
>gi|448513188|ref|XP_003866888.1| Smx2 protein [Candida orthopsilosis Co 90-125]
gi|380351226|emb|CCG21450.1| Smx2 protein [Candida orthopsilosis Co 90-125]
Length = 90
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L ++DK V V+L G R+V G L+GYD LN+ + +A+E D + +G+
Sbjct: 7 ELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDG--------EKLNIGI 58
Query: 102 IVCRGTAVM 110
V RG +++
Sbjct: 59 TVIRGNSIV 67
>gi|326482088|gb|EGE06098.1| hypothetical protein TEQG_05211 [Trichophyton equinum CBS 127.97]
Length = 240
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---------------DA 86
+ ++ ++V LT GRQ+TG + +D+ +NLVL + EF R +
Sbjct: 8 KMQNLINYRMRVTLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKKKSGKGGQAAPGSSS 67
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVS 113
PL ++ R LGL + RGT V+ S
Sbjct: 68 TTPLVEAEEKRTLGLTIVRGTHVVSCS 94
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAV 109
+ RG V
Sbjct: 61 IVRGDNV 67
>gi|366998846|ref|XP_003684159.1| hypothetical protein TPHA_0B00530 [Tetrapisispora phaffii CBS 4417]
gi|357522455|emb|CCE61725.1| hypothetical protein TPHA_0B00530 [Tetrapisispora phaffii CBS 4417]
Length = 85
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 39 TVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQT 96
T LDL K +D+ V VKL G R++ GTL+ +D N VL +AVE + D LK+ +++
Sbjct: 5 TPLDLLKLNLDERVYVKLRGARELVGTLQAFDSHCNFVLSDAVETIYQLIDGELKSREKS 64
Query: 97 RQLGLIVCRGTAVMLVS 113
+ +I RG V L++
Sbjct: 65 SE--MIFVRGDTVALIT 79
>gi|340053849|emb|CCC48143.1| u6 snrna-associated sm-like protein [Trypanosoma vivax Y486]
Length = 92
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ 95
+KE +L L +D+ V V L R++ G LKG+D +NLVL A +++D +
Sbjct: 11 KKEGILTLESHLDRPVVVSLED-REIHGILKGFDNNINLVLANAEIWVKDT--------R 61
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
+++G + RG ++ VS D T NPF
Sbjct: 62 VKRIGACIVRGGLLVSVSSGDTTLLDHNPF 91
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAV 109
+ RG V
Sbjct: 61 IVRGDNV 67
>gi|290462981|gb|ADD24538.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus salmonis]
Length = 105
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E LDL + +D+ + VK+ R++ G L YDQ LN++L E E + + +T ++
Sbjct: 17 EEPLDLIRLSLDERIYVKMRNERELKGRLNAYDQYLNMILGEVEETVTSIEIDEETYEEV 76
Query: 97 -----RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 YRTTKRNIPMLFVRGDGVILVSP 99
>gi|119175495|ref|XP_001239965.1| hypothetical protein CIMG_09586 [Coccidioides immitis RS]
gi|392870163|gb|EAS27328.2| hypothetical protein CIMG_09586 [Coccidioides immitis RS]
Length = 223
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF + + PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRKVKRRQAKGPQGGNGPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
T++ R LGL + RGT V+ S
Sbjct: 69 TEEKRTLGLTIVRGTHVVSCS 89
>gi|320167518|gb|EFW44417.1| hypothetical protein CAOG_02442 [Capsaspora owczarzaki ATCC 30864]
Length = 106
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 33 MSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA----- 86
+S + + LDL K +D+ + VK+ G R++ G L YDQ LN++L + E +
Sbjct: 14 VSTKVDVPLDLIKLSLDERILVKMRGDRELRGRLHAYDQHLNMILSDVEETVTTVEIDEE 73
Query: 87 --DDPLKTTDQTRQLGLIVCRGTAVMLVSP 114
++ +KTT R++ ++ RG V+LVSP
Sbjct: 74 TFEEMVKTT--KREVPMLFVRGDGVILVSP 101
>gi|343427129|emb|CBQ70657.1| probable LSM3-U6 snRNA-associated Sm-like protein [Sporisorium
reilianum SRZ2]
Length = 113
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 42 DLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT---- 96
DL + + + V VKL G R++ GTL YD +NL+L + E + D +T +T
Sbjct: 31 DLIRLSISERVYVKLRGDRELRGTLHAYDGHMNLILGDVEETIYVVDINEETGAETVRVV 90
Query: 97 -RQLGLIVCRGTAVMLVSPTDGT 118
RQ ++ RG +V+LVSP T
Sbjct: 91 KRQSEMLFVRGDSVILVSPPSST 113
>gi|126178181|ref|YP_001046146.1| like-Sm ribonucleoprotein, core [Methanoculleus marisnigri JR1]
gi|125860975|gb|ABN56164.1| Small nuclear ribonucleoprotein, LSM family [Methanoculleus
marisnigri JR1]
Length = 75
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V + L GGR++ G L+GYD +NLVLD+A E + A ++LG ++ RG V+
Sbjct: 18 VIISLKGGREIRGILQGYDVHMNLVLDKAEEEVDGA---------AQKLGTLIVRGDNVI 68
Query: 111 LVSPT 115
++P+
Sbjct: 69 YITPS 73
>gi|425781950|gb|EKV19884.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum PHI26]
Length = 85
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCR 105
+++K V +L G R+V G L+GYD +N+VLDEA E + D K + G++V R
Sbjct: 18 YMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFE---EKDGGEKVS-----AGMVVIR 69
Query: 106 GTAVMLVSPTD 116
G +++++ +
Sbjct: 70 GNSIVMLEALE 80
>gi|303314917|ref|XP_003067467.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107135|gb|EER25322.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320037834|gb|EFW19771.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 223
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----------DADDPLKT 92
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF + + PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRKVKRRQAKGPQGGNGPLVE 68
Query: 93 TDQTRQLGLIVCRGTAVMLVS 113
T++ R LGL + RGT V+ S
Sbjct: 69 TEEKRTLGLTIVRGTHVVSCS 89
>gi|83765541|dbj|BAE55684.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864814|gb|EIT74108.1| hypothetical protein Ao3042_09989 [Aspergillus oryzae 3.042]
Length = 122
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRG 106
++K V +L G R+V G L+GYD +N+VLDEA E K + +G++V RG
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKQGGEKVAIGMVVIRG 52
Query: 107 TAVMLVS 113
+V+++
Sbjct: 53 NSVVMLE 59
>gi|323454582|gb|EGB10452.1| hypothetical protein AURANDRAFT_9439, partial [Aureococcus
anophagefferens]
Length = 62
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
DL ++++K + +K R++ GTL+GYDQ +NLV+++A+E + + + ++G
Sbjct: 6 DLKRYMEKRLLIKARARRKLVGTLRGYDQFMNLVVEDAIEQV--------SLTEKNEIGT 57
Query: 102 IVCRG 106
+V RG
Sbjct: 58 VVIRG 62
>gi|400599588|gb|EJP67285.1| U6 snRNA-associated Sm-like protein LSm3 [Beauveria bassiana ARSEF
2860]
Length = 95
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 41 LDLAKFV-DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--DADDPLKTTDQTR 97
LDL + + ++ V VKL G R++ G L YD NLVL E E + + DD + +R
Sbjct: 15 LDLVRLLLNEVVFVKLRGDRELKGKLHAYDSHCNLVLGEVEETIYGVEEDDEEEAKSVSR 74
Query: 98 QLGLIVCRGTAVMLVSP 114
+ ++ RG +V+L+SP
Sbjct: 75 KSEMLFVRGDSVVLISP 91
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQ 98
T L L VD+ + V GR + G LKG+DQ N++LDE+ E + + + Q
Sbjct: 3 TGLGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGV----QQLV 58
Query: 99 LGLIVCRGTAVMLVSPTD 116
LGL + RG + +V D
Sbjct: 59 LGLYIIRGDNISIVGELD 76
>gi|312136602|ref|YP_004003939.1| small nuclear ribonucleoprotein, lsm family [Methanothermus
fervidus DSM 2088]
gi|311224321|gb|ADP77177.1| Small nuclear ribonucleoprotein, LSM family [Methanothermus
fervidus DSM 2088]
Length = 80
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K ++ V ++L G R+ G LK +D +NLVL++A E ++ + TR+LG +
Sbjct: 17 LGKSLNSPVLIRLKGEREFRGILKSFDLHMNLVLNDAEE--------IENGEVTRKLGTV 68
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 69 LIRGDNIVYISP 80
>gi|330796969|ref|XP_003286536.1| hypothetical protein DICPUDRAFT_30992 [Dictyostelium purpureum]
gi|325083517|gb|EGC36968.1| hypothetical protein DICPUDRAFT_30992 [Dictyostelium purpureum]
Length = 97
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 32 KMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPL 90
K G E LDL + +D+ + VK+ R++ G L YDQ LN++L + E ++ +
Sbjct: 4 KEEGTVEEPLDLIRLSLDERIFVKMRQDRELRGKLHAYDQHLNMILSDVEETIKVVEKDE 63
Query: 91 KTTDQ-----TRQLGLIVCRGTAVMLVSP 114
+T ++ R + ++ RG V+L+SP
Sbjct: 64 ETDEEIIRNIKRNIKMLFIRGDGVILISP 92
>gi|196003100|ref|XP_002111417.1| hypothetical protein TRIADDRAFT_23866 [Trichoplax adhaerens]
gi|190585316|gb|EDV25384.1| hypothetical protein TRIADDRAFT_23866 [Trichoplax adhaerens]
Length = 104
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 32 KMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL---DEAVEFLRDAD 87
+ S E LDL + +D+ + VK+ R++ G L YDQ LN+VL +E + + D
Sbjct: 9 ETSNTVEEPLDLVRLSLDERILVKMRNDRELRGRLHAYDQHLNMVLGDVEETITTVEIDD 68
Query: 88 DPLKTTDQT--RQLGLIVCRGTAVMLVSP 114
+ + +T RQ+ ++ RG V+LVSP
Sbjct: 69 ETFEELYKTSKRQIPMLYVRGDGVILVSP 97
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L VD+ + V GR + G LKGYDQ NL++DE+ E + +T + LGL
Sbjct: 7 LEDLVDETISVITNDGRNIVGILKGYDQATNLIMDESHERVYST----RTGVEQLVLGLY 62
Query: 103 VCRGTAVMLVSPTD 116
+ RG + +V D
Sbjct: 63 IIRGDNISVVGELD 76
>gi|71031248|ref|XP_765266.1| small nuclear ribonucleoprotein G [Theileria parva strain Muguga]
gi|68352222|gb|EAN32983.1| small nuclear ribonucleoprotein G, putative [Theileria parva]
Length = 86
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQ-VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA 86
+ S+ + + + K + K + V L G R V G L+GYD +N+VLD A+E + +
Sbjct: 1 MDSINYNRKYTYITQFYKIIIKCCKIVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGE- 59
Query: 87 DDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
DQ LG++V RG +++ D
Sbjct: 60 -------DQV-DLGVVVVRGNSILYWECLD 81
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCR 105
++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL + R
Sbjct: 1 YLNRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLYIVR 56
Query: 106 GTAVMLVSPTD 116
G V ++ D
Sbjct: 57 GDNVAVIGEID 67
>gi|242808554|ref|XP_002485189.1| small nuclear ribonucleoprotein SmB, putative [Talaromyces
stipitatus ATCC 10500]
gi|218715814|gb|EED15236.1| small nuclear ribonucleoprotein SmB, putative [Talaromyces
stipitatus ATCC 10500]
Length = 218
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-----------DADDPLK 91
+ ++ ++V L GRQ+TG + +D+ +NLVL + EF R A PL
Sbjct: 9 MQNLINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKRKATKQAPGAAPAPLV 68
Query: 92 TTDQTRQLGLIVCRGTAVMLVS 113
++ R LGL + RGT V+ S
Sbjct: 69 EAEEKRTLGLTIVRGTNVVSCS 90
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V+ V + + GR GTL+G+DQ +NL+LDE+ E + ++ LGL
Sbjct: 5 LESYVNHTVSIITSDGRNFVGTLRGFDQTINLILDESHERVYSQTQGIEQV----VLGLH 60
Query: 103 VCRGTAVMLVSPTDGTDEI 121
+ RG V ++ D DEI
Sbjct: 61 IIRGDNVAVIGEMD--DEI 77
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 31 LKMSGRKETVLD--LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL----R 84
+ +G +E L LA ++D+ + V L GR++ GTL+ +DQ N VL+ A E + +
Sbjct: 1 MSWAGPEEIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ 60
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFM 126
D P LGL V RG V+L+ D E P M
Sbjct: 61 YCDIP---------LGLYVIRGENVVLIGELDTEREELPPHM 93
>gi|324523019|gb|ADY48176.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324523877|gb|ADY48319.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324527206|gb|ADY48760.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324527733|gb|ADY48837.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324528368|gb|ADY48905.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
gi|324528673|gb|ADY48938.1| U6 snRNA-associated Sm-like protein LSm3 [Ascaris suum]
Length = 105
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR----DADDPLKT 92
E LDL + +D+ + VK+ R+V G L +DQ LN++L + E + D ++ +
Sbjct: 18 EEPLDLIRLSLDERIYVKMRNDREVRGRLHAFDQHLNMILSQVEETVTTVELDEENFEEM 77
Query: 93 TDQT-RQLGLIVCRGTAVMLVSP 114
QT R + ++ RG A++LV+P
Sbjct: 78 HKQTKRHIPMLFVRGDAIILVAP 100
>gi|219851061|ref|YP_002465493.1| Sm ribonucleoprotein-like protein [Methanosphaerula palustris
E1-9c]
gi|219545320|gb|ACL15770.1| Like-Sm ribonucleoprotein core [Methanosphaerula palustris E1-9c]
Length = 75
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVCRGTAVM 110
V V L G R++ G L+GYD +NLVLD+A E T T+++G ++ RG V+
Sbjct: 18 VIVSLKGDRELRGVLQGYDVHMNLVLDKAEEV---------TDGATQKIGTLIVRGDNVI 68
Query: 111 LVSPT 115
+SP+
Sbjct: 69 YISPS 73
>gi|209878201|ref|XP_002140542.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556148|gb|EEA06193.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 98
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L F ++ V V T G+ G+LKGYDQL N++L + E + +A+ + + +LGL
Sbjct: 5 LLTFSERLVSVLTTDGKVYIGSLKGYDQLTNIILAKCREKVYEANSKV---IKYIELGLF 61
Query: 103 VCRGTAVMLVSPTDGTDEIANPFMQPD 129
+ RG ++ L+ + D + + + +
Sbjct: 62 LIRGDSIALIGEIESEDPVKSAISEEE 88
>gi|354682634|gb|AER30240.1| small nuclear ribonucleoprotein [Sporidiobolus johnsonii]
Length = 43
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 96 TRQLGLIVCRGTAVMLVSPTDGTDEIANPF 125
TR LGL V RGT+++++SP DG++EIANPF
Sbjct: 12 TRSLGLAVLRGTSLVVLSPLDGSEEIANPF 41
>gi|384252623|gb|EIE26099.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 95
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ---- 95
LDL + +D+ + VKL G R++ G L YDQ LN++L E E + + +T ++
Sbjct: 12 LDLIRLSLDERIYVKLRGDRELRGRLHAYDQHLNMILGEVEETITSIEIDDETYEEIIKT 71
Query: 96 -TRQLGLIVCRGTAVMLVSP 114
R + + RG V+LVSP
Sbjct: 72 NKRAVPFLFVRGDGVILVSP 91
>gi|440637312|gb|ELR07231.1| hypothetical protein GMDG_02458 [Geomyces destructans 20631-21]
Length = 98
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRDADDP----LKTT 93
LDL + +D+ V VKL G R++ G L YD NLVL + VE ++ D DD LKT
Sbjct: 16 LDLVRLSLDEIVFVKLRGDRELKGRLHAYDSHCNLVLGDVVETVYVVDEDDEDGETLKTI 75
Query: 94 DQTRQLGLIVCRGTAVMLVSP 114
+ + ++ RG +V+L+SP
Sbjct: 76 HKKSE--MLFVRGDSVVLISP 94
>gi|15678676|ref|NP_275791.1| small nuclear ribonucleoprotein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|6094215|sp|O26745.1|RUXX_METTH RecName: Full=Putative snRNP Sm-like protein
gi|2621731|gb|AAB85154.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 81
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++ V +KL G R+ G LK +D +NLVL++A E L+ + TR+LG +
Sbjct: 18 LGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE--------LEDGEVTRRLGTV 69
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 70 LIRGDNIVYISP 81
>gi|268323608|emb|CBH37196.1| putative snRNP Sm-like protein [uncultured archaeon]
Length = 102
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L K + V V++ G R+ GTL+GYD +NLVL +A E D D +K +G I
Sbjct: 14 LNKSLRSPVIVRIRGAREFRGTLEGYDLHMNLVLSDAEEL--DGDAIVKEL-----MGEI 66
Query: 103 VCRGTAVMLVSPT 115
+ RG V+ +SPT
Sbjct: 67 LVRGDNVVYISPT 79
>gi|326472667|gb|EGD96676.1| small nuclear ribonucleoprotein-associated protein B [Trichophyton
tonsurans CBS 112818]
Length = 187
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---------------DAD 87
+ ++ ++V LT GRQ+TG + +D+ +NLVL + EF R +
Sbjct: 9 MQNLINYRMRVTLTDGRQMTGQMLAFDKHMNLVLADTEEFRRVKKKSGKGGQAAPGSSST 68
Query: 88 DPLKTTDQTRQLGLIVCRGTAVMLVS 113
PL ++ R LGL + RGT V+ S
Sbjct: 69 TPLVEAEEKRTLGLTIVRGTHVVSCS 94
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAVMLVSP----TDGTDEIANPFMQP 128
+ G V+++ TD + ++ N +P
Sbjct: 61 IVGGDNVVVIGEIDEDTDSSLDLGNIRAEP 90
>gi|357615889|gb|EHJ69888.1| LSM Sm-like protein family member [Danaus plexippus]
Length = 102
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT--- 96
LDL + +D+ + VK+ R++ G L YDQ LN+VL +A E + + +T ++
Sbjct: 17 LDLIRLSLDERIYVKMRNERELRGKLHAYDQHLNMVLGDAEETITTVEIDEETYEEVYRT 76
Query: 97 --RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 NKRNIPMLFVRGDGVILVSP 96
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLG 100
+ LA F+++ VQV GR V G+LKG+D NL+L ++ E + D ++T LG
Sbjct: 1 MSLADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETI----PLG 56
Query: 101 LIVCRGTAVMLV 112
+ + RG V +V
Sbjct: 57 VYLLRGENVAMV 68
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L +V+ V + + GR GTLKG+DQ +N++LD++ E + P + +Q LGL
Sbjct: 5 LESYVNHTVSIITSDGRNFVGTLKGFDQTINIILDDSHERVY---SPNQGVEQII-LGLH 60
Query: 103 VCRGTAVMLVSPTDGT 118
+ RG V ++ D T
Sbjct: 61 LIRGDNVAIIGEVDET 76
>gi|307104511|gb|EFN52764.1| hypothetical protein CHLNCDRAFT_26410 [Chlorella variabilis]
Length = 99
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDA-------DDPLKT 92
LDL + +D+ V VKL G R++ G L YDQ LN++L + E + ++ +K
Sbjct: 12 LDLIRLSLDEKVYVKLKGERELRGKLHAYDQHLNMILGDVEETVTSVEIDEETFEEIIKA 71
Query: 93 T--DQTRQLGLIVCRGTAVMLVSP 114
+ D +R + + RG V+LVSP
Sbjct: 72 SEGDSSRMVPYLFVRGDGVILVSP 95
>gi|225713042|gb|ACO12367.1| U6 snRNA-associated Sm-like protein LSm3 [Lepeophtheirus salmonis]
Length = 105
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQT 96
E LDL + +D+ + VK+ R++ G L YDQ LN++L E E + + +T ++
Sbjct: 17 EEPLDLIRLSLDERIYVKMRNERELKGRLNAYDQHLNMILGEVEETVTSIEIDEETYEEV 76
Query: 97 -----RQLGLIVCRGTAVMLVSP 114
R + ++ RG V+LVSP
Sbjct: 77 YRTTKRNIPMLFVRGDGVILVSP 99
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 40 VLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQL 99
V+ ++++K V +L G R+V G L+GYD +N+VLDEA E K + +
Sbjct: 15 VVCFLQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFE--------EKEGGEKVPI 66
Query: 100 GLIVCRGTAVMLVSPTD 116
G+ V RG +V+++ +
Sbjct: 67 GMSVIRGNSVVMLEALE 83
>gi|255714250|ref|XP_002553407.1| KLTH0D16082p [Lachancea thermotolerans]
gi|238934787|emb|CAR22969.1| KLTH0D16082p [Lachancea thermotolerans CBS 6340]
Length = 81
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD-ADDPLKTTDQ 95
+T LDL K +D+ V VKL G R++TG L+ +D N+VL A E + + D LK++
Sbjct: 2 DTPLDLLKLNLDEKVFVKLRGAREMTGVLQAFDSHCNIVLSNATETIYELVDGELKSS-- 59
Query: 96 TRQLGLIVCRGTAVMLV-SPTD 116
T+ ++ RG +V L+ +P+D
Sbjct: 60 TKGSEMVFVRGDSVTLITTPSD 81
>gi|340508672|gb|EGR34332.1| hypothetical protein IMG5_016230 [Ichthyophthirius multifiliis]
Length = 1010
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 29 KSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL----R 84
+ LK R+ +++D V+V + GR + GT +D+ LNLV+ E EF +
Sbjct: 824 ERLKTDTRQSRRSKFIQWIDYRVRVTILDGRMLVGTFLAFDKHLNLVISETEEFRPIKPK 883
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLV---SPTDGTDEIANPF 125
DP + T R LGL++ RG ++ + +P + I N F
Sbjct: 884 KKGDPERQT--KRILGLVIIRGENIISINAEAPPNQQVNIVNFF 925
>gi|326475823|gb|EGD99832.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton tonsurans CBS
112818]
gi|326479153|gb|EGE03163.1| small nuclear ribonucleoprotein LSM8 [Trichophyton equinum CBS
127.97]
Length = 98
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRDADDPLKTTDQTRQL 99
+ L +++K + V GR + GTL DQL NLVL + VE +R DDP +T+ +
Sbjct: 1 MSLQSYINKKILVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEV--EH 58
Query: 100 GLIVCRGTAVMLVSPTD 116
GL + RG V++ D
Sbjct: 59 GLYLIRGDNVVICGEVD 75
>gi|304314789|ref|YP_003849936.1| small nuclear ribonucleoprotein [Methanothermobacter marburgensis
str. Marburg]
gi|302588248|gb|ADL58623.1| small nuclear ribonucleoprotein [Methanothermobacter marburgensis
str. Marburg]
Length = 78
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++ V +KL G R+ G LK +D +NLVL++A E L+ + TR+LG +
Sbjct: 15 LGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE--------LEDGEVTRRLGTV 66
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 67 LIRGDNIVYISP 78
>gi|13786869|pdb|1I81|A Chain A, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786870|pdb|1I81|B Chain B, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786871|pdb|1I81|C Chain C, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786872|pdb|1I81|D Chain D, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786873|pdb|1I81|E Chain E, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786874|pdb|1I81|F Chain F, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|13786875|pdb|1I81|G Chain G, Crystal Structure Of A Heptameric Lsm Protein From
Methanobacterium Thermoautotrophicum
gi|27573929|pdb|1MGQ|A Chain A, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573930|pdb|1MGQ|B Chain B, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573931|pdb|1MGQ|C Chain C, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573932|pdb|1MGQ|D Chain D, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573933|pdb|1MGQ|E Chain E, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573934|pdb|1MGQ|F Chain F, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
gi|27573935|pdb|1MGQ|G Chain G, Crystal Structure Of A Heptameric Sm-Like Protein From
Methanobacterium Thermoautotrophicum
Length = 83
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++ V +KL G R+ G LK +D +NLVL++A E L+ + TR+LG +
Sbjct: 20 LGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE--------LEDGEVTRRLGTV 71
Query: 103 VCRGTAVMLVSP 114
+ RG ++ +SP
Sbjct: 72 LIRGDNIVYISP 83
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L + VD + V + GR + G L+G+DQ NL+LDE E + A ++ LGL
Sbjct: 4 ELTELVDTLISVITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEA----PLGL 59
Query: 102 IVCRGTAVMLVSPTD 116
+ RG + ++ D
Sbjct: 60 YIIRGDNIAVIGEID 74
>gi|354546754|emb|CCE43486.1| hypothetical protein CPAR2_211300 [Candida parapsilosis]
Length = 73
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGL 101
+L ++DK V V+L G R+V G L+GYD LN+ + +A+E D + +G+
Sbjct: 7 ELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDG--------EKLNIGI 58
Query: 102 IVCRGTAVM 110
V RG +++
Sbjct: 59 TVIRGNSIV 67
>gi|340897383|gb|EGS16973.1| putative RNA splicing factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RDADDP 89
MS + +A +++ ++V L GRQ+TG + +D+ +NLVL + EF R P
Sbjct: 1 MSSSQNRQGKMAGYINWRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRKTKRMQAKP 60
Query: 90 LKTTDQT------RQLGLIVCRGTAVMLVS 113
+T QT R LGL + RG ++ +S
Sbjct: 61 NSSTTQTLIQEEKRTLGLTIVRGANIIALS 90
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
Length = 127
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
LA +DK + V L GR++ GTL+ +DQ NLVL++AVE + D LGL
Sbjct: 14 LADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLYCDLP-----LGLY 68
Query: 103 VCRGTAVMLVSPTDGT 118
+ RG V+LV D T
Sbjct: 69 IIRGENVVLVGELDQT 84
>gi|401625995|gb|EJS43964.1| lsm5p [Saccharomyces arboricola H-6]
Length = 93
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
K +++ V + L R+ GTL G+D +N++L++AVE+L D +D + + G ++
Sbjct: 14 KTINQRVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDETRNEKVMQHHGRMLL 73
Query: 105 RGTAVMLVSP 114
G + ++ P
Sbjct: 74 SGNNIAILVP 83
>gi|384249031|gb|EIE22514.1| hypothetical protein COCSUDRAFT_83471 [Coccomyxa subellipsoidea
C-169]
Length = 125
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 13/82 (15%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF----LRDADDPLKTTDQTRQ 98
L + +DK + V+L GR++ G L+ +DQ NLVL+ AVE + A+DP
Sbjct: 13 LVEELDKRLLVQLRDGRKIVGILRSFDQFANLVLEGAVERIIVGILYAEDP--------- 63
Query: 99 LGLIVCRGTAVMLVSPTDGTDE 120
LGL V RG V+L+ D + +
Sbjct: 64 LGLYVVRGENVVLLGDIDASHD 85
>gi|302696809|ref|XP_003038083.1| hypothetical protein SCHCODRAFT_102915 [Schizophyllum commune H4-8]
gi|300111780|gb|EFJ03181.1| hypothetical protein SCHCODRAFT_102915, partial [Schizophyllum
commune H4-8]
Length = 95
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQ-------TRQLGLIVCR 105
VKL G RQ+ G L YD +NL+L + E + D P + R++G++ R
Sbjct: 24 VKLRGDRQLEGVLHAYDGHMNLILSDVEETIMIVDVPEGAPESQGTVNVAKRKMGMLFVR 83
Query: 106 GTAVMLVSP 114
G V+LVSP
Sbjct: 84 GDGVILVSP 92
>gi|161527729|ref|YP_001581555.1| like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
gi|160339030|gb|ABX12117.1| Like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
Length = 78
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L + +++ V +KL G + + G L G+DQ +NL+LD + E + + + LG I
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEE--------IPAEGEAKGLGSI 61
Query: 103 VCRGTAVMLVSP 114
V RG V+++SP
Sbjct: 62 VVRGDNVVMISP 73
>gi|403223040|dbj|BAM41171.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V GR G LKG+DQL NLVL +E + + P++ +LG+
Sbjct: 5 LEQYIESNVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPEAPVEEL----ELGVY 60
Query: 103 VCRGTAVMLVSPTD 116
+ RG V+LV D
Sbjct: 61 ILRGDNVVLVGEVD 74
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
+ +VD VQV L GR + G LKGYD NL+L ++VE D ++ LGL
Sbjct: 4 IESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMI----PLGLY 59
Query: 103 VCRGTAVMLVSPTD 116
V +G V +V+ D
Sbjct: 60 VIKGDNVAVVAELD 73
>gi|190346690|gb|EDK38837.2| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 33 MSGRKETVLD----LAKFVDKGVQVKLTGGRQ----VTGTLKGYDQLLNLVLDEAVEFLR 84
MS K+++L + KF+ + V V + Q + G ++G+D+ +N+V+D+AVE L+
Sbjct: 1 MSTHKQSMLPPINVIFKFLQQQVPVTIWLYEQTQSKIQGRIRGFDEFMNIVIDDAVEILK 60
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
D++ P LG I+ +G + L+S +
Sbjct: 61 DSEVP---------LGRILLKGDNITLISSVE 83
>gi|6320994|ref|NP_011073.1| Lsm5p [Saccharomyces cerevisiae S288c]
gi|731523|sp|P40089.1|LSM5_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|603386|gb|AAB64673.1| Yer146wp [Saccharomyces cerevisiae]
gi|45269457|gb|AAS56109.1| YER146W [Saccharomyces cerevisiae]
gi|151944864|gb|EDN63123.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190405705|gb|EDV08972.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|256272052|gb|EEU07064.1| Lsm5p [Saccharomyces cerevisiae JAY291]
gi|259146073|emb|CAY79333.1| Lsm5p [Saccharomyces cerevisiae EC1118]
gi|285811779|tpg|DAA07807.1| TPA: Lsm5p [Saccharomyces cerevisiae S288c]
gi|349577808|dbj|GAA22976.1| K7_Lsm5p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299849|gb|EIW10941.1| Lsm5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLIVC 104
K +++ V + L R+ GTL G+D +N++L++AVE+L D +D + + G ++
Sbjct: 14 KTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRMLL 73
Query: 105 RGTAVMLVSP 114
G + ++ P
Sbjct: 74 SGNNIAILVP 83
>gi|389751358|gb|EIM92431.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 136
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L VD+ + V L G+++ G L+ YDQ NLVL+E +E + K + +GL
Sbjct: 13 LVDCVDRKMLVILRDGKKLHGVLRSYDQFANLVLEETIERIYS-----KNHYADKYVGLY 67
Query: 103 VCRGTAVMLVSPTDGTDEIANPFMQPD 129
+ RG V+L+ D +E P + D
Sbjct: 68 LIRGENVVLLGEIDLDEEDEIPLRRAD 94
>gi|429965212|gb|ELA47209.1| hypothetical protein VCUG_01309 [Vavraia culicis 'floridensis']
Length = 71
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
+K V DL ++DK V VKL GGR+V G LK YD NL+L
Sbjct: 6 KKFLVDDLNDYIDKAVIVKLIGGREVKGFLKSYDNNFNLIL 46
>gi|119184377|ref|XP_001243108.1| hypothetical protein CIMG_07004 [Coccidioides immitis RS]
gi|303320353|ref|XP_003070176.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109862|gb|EER28031.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041233|gb|EFW23166.1| small nuclear ribonucleoprotein Lsm8 [Coccidioides posadasii str.
Silveira]
gi|392865995|gb|EAS31853.2| small nuclear ribonucleoprotein Lsm8 [Coccidioides immitis RS]
Length = 98
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRDADDPLKTTDQTRQL 99
+ L +++K V V GR + GTL DQL NLVL E VE +R DDP +++
Sbjct: 1 MSLQPYINKKVLVLTVDGRTLIGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDH-- 58
Query: 100 GLIVCRGTAVMLVSPTD 116
GL + RG V++ D
Sbjct: 59 GLYLIRGDNVVICGEID 75
>gi|224011054|ref|XP_002294484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969979|gb|EED88318.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 90
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLK----- 91
E LDL K +D+ V VK R++ G L +DQ LN+VL + E + ++ +
Sbjct: 3 EEPLDLIKLSIDERVYVKCRNDRELRGKLHAFDQHLNMVLSDVEETITSTEEDDETGEEI 62
Query: 92 TTDQTRQLGLIVCRGTAVMLVSP 114
+TR +G++ RG V+LVSP
Sbjct: 63 VNKRTRSVGMLFVRGDIVVLVSP 85
>gi|392577898|gb|EIW71026.1| hypothetical protein TREMEDRAFT_27133 [Tremella mesenterica DSM
1558]
Length = 113
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF-----LRDA--DDPLKTTDQ 95
+ ++ ++V L GR + G + YD+ +N VL E EF +DA ++P T Q
Sbjct: 1 MVTLINYRLKVVLNDGRSLVGQMLAYDKHMNFVLAECEEFRTVKVTKDAPPNEPTPTVQQ 60
Query: 96 TRQLGLIVCRGTAVMLVS 113
R LGL++ RG ++ V+
Sbjct: 61 KRTLGLVILRGETIVSVT 78
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRQLGLI 102
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E + + ++ LGL
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQV----VLGLY 60
Query: 103 VCRGTAV 109
+ RG V
Sbjct: 61 IVRGDNV 67
>gi|146418481|ref|XP_001485206.1| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 33 MSGRKETVLD----LAKFVDKGVQVKLTGGRQ----VTGTLKGYDQLLNLVLDEAVEFLR 84
MS K+++L + KF+ + V V + Q + G ++G+D+ +N+V+D+AVE L+
Sbjct: 1 MSTHKQSMLPPINVIFKFLQQQVPVTIWLYEQTQLKIQGRIRGFDEFMNIVIDDAVEILK 60
Query: 85 DADDPLKTTDQTRQLGLIVCRGTAVMLVSPTD 116
D++ P LG I+ +G + L+S +
Sbjct: 61 DSEVP---------LGRILLKGDNITLISSVE 83
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,917,644,452
Number of Sequences: 23463169
Number of extensions: 69655946
Number of successful extensions: 163358
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 863
Number of HSP's that attempted gapping in prelim test: 161634
Number of HSP's gapped (non-prelim): 2146
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)