Query 032893
Match_columns 131
No_of_seqs 160 out of 1328
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 11:33:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ner_A Cytochrome B5 type B; h 100.0 5.4E-30 1.8E-34 170.6 6.2 79 3-81 10-88 (92)
2 1cyo_A Cytochrome B5; electron 100.0 6.2E-30 2.1E-34 170.6 6.4 79 3-81 5-83 (93)
3 1cxy_A Cytochrome B5; helix, b 100.0 2E-29 6.7E-34 167.2 7.0 79 1-79 6-88 (90)
4 1hko_A Cytochrome B5; electron 100.0 2.9E-29 1E-33 170.4 7.1 81 3-83 9-89 (104)
5 2ibj_A Cytochrome B5, CYTB5; F 100.0 1.6E-29 5.5E-34 166.9 5.2 78 3-80 7-84 (88)
6 3lf5_A Cytochrome B5 reductase 100.0 2.3E-29 8E-34 166.3 3.5 78 3-80 6-83 (88)
7 1x3x_A Cytochrome B5; hemoprot 99.9 1.5E-28 5E-33 160.4 4.7 76 2-78 3-82 (82)
8 1mj4_A Sulfite oxidase; cytoch 99.9 8.8E-28 3E-32 156.7 5.7 75 2-77 4-82 (82)
9 2keo_A Probable E3 ubiquitin-p 99.9 9.1E-29 3.1E-33 169.9 -3.3 78 3-80 24-101 (112)
10 1sox_A Sulfite oxidase; oxidor 99.9 3E-22 1E-26 165.7 8.0 79 2-81 4-86 (466)
11 1kbi_A Cytochrome B2, L-LCR; f 99.9 4.8E-22 1.6E-26 166.0 6.8 81 2-83 8-90 (511)
12 1j03_A Putative steroid bindin 99.7 4.2E-19 1.4E-23 119.9 3.7 60 2-63 2-65 (102)
13 4hkr_A Calcium release-activat 30.7 29 0.00098 25.5 2.3 20 109-128 152-171 (214)
14 1ho8_A Vacuolar ATP synthase s 20.4 6.2 0.00021 32.6 -3.2 35 27-63 426-460 (480)
No 1
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=99.96 E-value=5.4e-30 Score=170.58 Aligned_cols=79 Identities=53% Similarity=0.931 Sum_probs=75.9
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSSS 81 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~~ 81 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+..+||.+|+++|++|+||.|..++
T Consensus 10 ~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~~Hs~~a~~~L~~~~IG~l~~~~ 88 (92)
T 3ner_A 10 TYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSD 88 (92)
T ss_dssp CEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHHHTTCCHHHHHHHGGGEEEEECGGG
T ss_pred CeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHHHcCCCHHHHHHHHhCeeEEEChHh
Confidence 6899999999999999999999999999999999999999999999999999999888999999999999999998654
No 2
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=99.96 E-value=6.2e-30 Score=170.59 Aligned_cols=79 Identities=48% Similarity=0.865 Sum_probs=75.8
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSSS 81 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~~ 81 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..+||..|+++|++|+||.+...+
T Consensus 5 ~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~l~~~~ 83 (93)
T 1cyo_A 5 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDD 83 (93)
T ss_dssp CEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEECGGG
T ss_pred CccCHHHHHhhCCCCCEEEEECCEEEECCCcchhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHhCeeEEecCcc
Confidence 6899999999999999999999999999999999999999999999999999999988999999999999999998654
No 3
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=99.96 E-value=2e-29 Score=167.18 Aligned_cols=79 Identities=34% Similarity=0.768 Sum_probs=74.1
Q ss_pred CCCccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhh----hcCCCHHHHHhhhhceeee
Q 032893 1 MAKVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFE----DVGHSDSAREMMEKYHIGE 76 (131)
Q Consensus 1 ~~~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~----~~~hs~~a~~~l~~~~VG~ 76 (131)
|.+.||++||++|+++++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|. +..||.+|+++|++|+||.
T Consensus 6 ~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~~~~~Hs~~a~~~L~~~~IG~ 85 (90)
T 1cxy_A 6 TLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLIGT 85 (90)
T ss_dssp CCCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTEEEE
T ss_pred cCCCcCHHHHHHhcCCCCEEEEECCEEEECccchhhCcChHHHHHHHCCcchhHHHhhcccccCCCHHHHHHHHhCceeE
Confidence 568999999999999999999999999999999999999999999999999999999 5689999999999999999
Q ss_pred ecC
Q 032893 77 IDS 79 (131)
Q Consensus 77 l~~ 79 (131)
+++
T Consensus 86 l~~ 88 (90)
T 1cxy_A 86 LEE 88 (90)
T ss_dssp C--
T ss_pred eCC
Confidence 974
No 4
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=99.96 E-value=2.9e-29 Score=170.42 Aligned_cols=81 Identities=47% Similarity=0.837 Sum_probs=76.8
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCCCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSSSV 82 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~~~ 82 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..+||..|+++|++|+||.|...+.
T Consensus 9 ~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l~~~~~ 88 (104)
T 1hko_A 9 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDDR 88 (104)
T ss_dssp EEECHHHHHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHHHTTCSEECHHHHTTTTCCHHHHHHHTTTEEEEECTTSS
T ss_pred CccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHcCeeEEECCccc
Confidence 67999999999999999999999999999999999999999999999999999999889999999999999999987554
Q ss_pred C
Q 032893 83 P 83 (131)
Q Consensus 83 ~ 83 (131)
+
T Consensus 89 ~ 89 (104)
T 1hko_A 89 S 89 (104)
T ss_dssp T
T ss_pred c
Confidence 3
No 5
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=99.95 E-value=1.6e-29 Score=166.91 Aligned_cols=78 Identities=53% Similarity=0.937 Sum_probs=75.0
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSS 80 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~ 80 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|...+||.+|+++|++|+||.+...
T Consensus 7 ~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~l~~~ 84 (88)
T 2ibj_A 7 KYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAE 84 (88)
T ss_dssp CEECHHHHHTSEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTEECHHHHHHHTCCHHHHHHHGGGEEEEECGG
T ss_pred CccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcCHHHHHHHhCCCcchHHHHHcCCCHHHHHHHHcCceEEeCcc
Confidence 689999999999999999999999999999999999999999999999999999988899999999999999999754
No 6
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=99.95 E-value=2.3e-29 Score=166.26 Aligned_cols=78 Identities=36% Similarity=0.700 Sum_probs=74.6
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSS 80 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~ 80 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..||+.+++++|++|+||++..+
T Consensus 6 ~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~h~~~~~~~~L~~~~IG~l~~~ 83 (88)
T 3lf5_A 6 IEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAIK 83 (88)
T ss_dssp EEECHHHHHHCEETTEEEEEETTEEEECGGGTTTCTTCHHHHHTTTTEECHHHHHHHHTTCCHHHHTGGGEEEEECCC
T ss_pred CEeCHHHHHhhCCCCCEEEEECCEEEECccchhhCcChhhhhhhcCCCcchHHHHHHCCcHHHHHHHHcCeeEEeCCC
Confidence 679999999999999999999999999999999999999999999999999999999888889999999999999865
No 7
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=99.95 E-value=1.5e-28 Score=160.38 Aligned_cols=76 Identities=33% Similarity=0.576 Sum_probs=72.7
Q ss_pred CCccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchh--hhhcC--CCHHHHHhhhhceeeee
Q 032893 2 AKVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDD--FEDVG--HSDSAREMMEKYHIGEI 77 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~--f~~~~--hs~~a~~~l~~~~VG~l 77 (131)
.+.||++||++|++.++|||+|+|+|||||+|+..|||| ++|+.++|+|+|+. |++.+ ||..|+++|++|+||.+
T Consensus 3 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG-~~i~~~aG~D~T~~~~F~~~h~~hs~~a~~~L~~~~IG~l 81 (82)
T 1x3x_A 3 DKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGG-KVILNKAGQDATSVLKTLAPHVKAADVVMKKLKQTCIGKV 81 (82)
T ss_dssp SCEECHHHHHTCEETTEEEEEETTEEEECGGGGGGCTTG-GGGGGGTTSBCHHHHHHSHHHHHTHHHHHHHHHHHEEEEE
T ss_pred CCccCHHHHHhhCCCCCEEEEECCEEEECCcchhhCcCh-hhhhhhCCCCCchhhhhhcccccchHHHHHHHHhCcceEe
Confidence 478999999999999999999999999999999999999 99999999999999 99998 89999999999999987
Q ss_pred c
Q 032893 78 D 78 (131)
Q Consensus 78 ~ 78 (131)
.
T Consensus 82 ~ 82 (82)
T 1x3x_A 82 K 82 (82)
T ss_dssp C
T ss_pred C
Confidence 4
No 8
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=99.94 E-value=8.8e-28 Score=156.70 Aligned_cols=75 Identities=29% Similarity=0.620 Sum_probs=68.4
Q ss_pred CCccCHHHHhcccCCCC-eEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhh---cCCCHHHHHhhhhceeeee
Q 032893 2 AKVHDFQEVAKHNNRDD-CWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFED---VGHSDSAREMMEKYHIGEI 77 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~-~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~---~~hs~~a~~~l~~~~VG~l 77 (131)
.+.||++||++|++.++ |||+|+|+|||||+|+..||||.+.|+.++|+| |+.|++ .+||..|+++|++|+||+|
T Consensus 4 ~~~~t~~ev~~h~~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~il~~aG~D-t~~f~~~~~~~hs~~a~~~L~~~~IG~l 82 (82)
T 1mj4_A 4 THIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGP-LEPFWALYAVHNQSHVRELLAQYKIGEL 82 (82)
T ss_dssp CCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSB-SHHHHTTCGGGCSHHHHHHHHTTEEEEC
T ss_pred CCccCHHHHHHhcCCCCCeEEEECCEEEEchHHHHhCCCHhHHHHHHcCCC-hHHHHhhccccCcHHHHHHHHhCcceeC
Confidence 37899999999999998 999999999999999999999988888999999 678885 4799999999999999986
No 9
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=99.93 E-value=9.1e-29 Score=169.92 Aligned_cols=78 Identities=23% Similarity=0.432 Sum_probs=74.8
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSS 80 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~ 80 (131)
+.||++||++|++.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+.++||.+|+++|++|+||.+...
T Consensus 24 ~~~t~~Ev~~h~~~~d~wvvi~G~VYDVT~fl~~HPGG~~~l~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l~~~ 101 (112)
T 2keo_A 24 TLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALEAALQFEDTRESMHAFCVGQYLEP 101 (112)
T ss_dssp CEECHHHHHHHHHHTCCEEEETTEEEEHHHHHHHHTSTTSTTGGGTTSCHHHHHHHHHHSTTGGGTHHHHEEEEECCH
T ss_pred CccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCCCchhhhhhhCCccchHHHhHcCCCHHHHHHHHhCceEeeCCc
Confidence 689999999999999999999999999999999999999999999999999999997799999999999999999854
No 10
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=99.86 E-value=3e-22 Score=165.70 Aligned_cols=79 Identities=27% Similarity=0.525 Sum_probs=73.8
Q ss_pred CCccCHHHHhcccCCCC-eEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhh---cCCCHHHHHhhhhceeeee
Q 032893 2 AKVHDFQEVAKHNNRDD-CWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFED---VGHSDSAREMMEKYHIGEI 77 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~-~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~---~~hs~~a~~~l~~~~VG~l 77 (131)
.+.||++||++|++.++ |||+|+|+|||||+|+..||||.++|+.++|+| |+.|++ .+||.+|+++|++|+||.+
T Consensus 4 ~~~~t~~Ev~~H~~~~d~~Wvii~g~VYDvT~fl~~HPGG~~~il~~aG~D-T~~f~~~~~~~Hs~~a~~~L~~~~IG~l 82 (466)
T 1sox_A 4 YPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGA-LEPFWALYAVHGEPHVLELLQQYKVGEL 82 (466)
T ss_dssp CCEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSB-SHHHHHHSGGGGSHHHHHHHHTTEEEEE
T ss_pred CCeeCHHHHHHhcCCCCceEEEECCEEEechHhHhhCcCCcccchhhcCCc-cccccccccccCCHHHHHHHHhCceEEe
Confidence 36899999999999999 999999999999999999999999999999999 999986 5799999999999999999
Q ss_pred cCCC
Q 032893 78 DSSS 81 (131)
Q Consensus 78 ~~~~ 81 (131)
...+
T Consensus 83 ~~~~ 86 (466)
T 1sox_A 83 SPDE 86 (466)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8654
No 11
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.85 E-value=4.8e-22 Score=166.05 Aligned_cols=81 Identities=40% Similarity=0.709 Sum_probs=73.1
Q ss_pred CCccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHH-Hhh-hhceeeeecC
Q 032893 2 AKVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAR-EMM-EKYHIGEIDS 79 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~-~~l-~~~~VG~l~~ 79 (131)
.+.||++||++||+.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+.. |+..+. ++| ++|+||.++.
T Consensus 8 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~i~~~aG~DaT~~f~~~-H~~~~~~~~l~~~~~iG~l~~ 86 (511)
T 1kbi_A 8 KQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPNVIDKYIAPEKKLGPLQG 86 (511)
T ss_dssp SCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGG-SCTTHHHHHSCGGGEEEEBCS
T ss_pred CCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcChHHHHHHHcCcchhhhhhhc-CCHHHHHHhhccccEEEEecC
Confidence 3789999999999999999999999999999999999999999999999999999998 776664 555 7899999987
Q ss_pred CCCC
Q 032893 80 SSVP 83 (131)
Q Consensus 80 ~~~~ 83 (131)
.+.+
T Consensus 87 ~~~~ 90 (511)
T 1kbi_A 87 SMPP 90 (511)
T ss_dssp CCCT
T ss_pred Cccc
Confidence 6654
No 12
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.75 E-value=4.2e-19 Score=119.91 Aligned_cols=60 Identities=22% Similarity=0.357 Sum_probs=54.0
Q ss_pred CCccCHHHHhcccCCC---CeEEEEcCEEEecCcCcc-cCCChHHHHhhhhCCCCchhhhhcCCCH
Q 032893 2 AKVHDFQEVAKHNNRD---DCWLVISGKVYNVTPFLE-DHPGGDEVLLAATEKDATDDFEDVGHSD 63 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~---~~wvvi~g~VYDvT~f~~-~HPGG~~~l~~~aG~D~T~~f~~~~hs~ 63 (131)
.+.||++||++||+.+ +|||+|+|+|||||+|.. .||||. +..+||+|+|+.|...+|+.
T Consensus 2 ~~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~--~~~~AG~DaT~~f~~~~~~~ 65 (102)
T 1j03_A 2 PMEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGD--YSMFAGKDASRALGKMSKNE 65 (102)
T ss_dssp CCCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSST--TTTTTTSBCHHHHHHTCCCS
T ss_pred CcccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCc--ccccccchHHHHHHHcCCCh
Confidence 3689999999999876 799999999999999976 799998 45899999999999988874
No 13
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=30.74 E-value=29 Score=25.55 Aligned_cols=20 Identities=30% Similarity=0.755 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 032893 109 QFLVPMLILGIAFAFRYFSK 128 (131)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~ 128 (131)
-+++|.+++-++|+++||-+
T Consensus 152 ~vliPv~i~F~~Fa~hFYrs 171 (214)
T 4hkr_A 152 VVLIPVMIIFMAFAIHFYRS 171 (214)
T ss_dssp HHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45688888889999998853
No 14
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=20.38 E-value=6.2 Score=32.60 Aligned_cols=35 Identities=29% Similarity=0.314 Sum_probs=26.7
Q ss_pred EEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCH
Q 032893 27 VYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSD 63 (131)
Q Consensus 27 VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~ 63 (131)
-+|+..|+..||.|..++.+..|++.- ++-..|..
T Consensus 426 c~Digefvr~~P~gr~i~~~lg~K~~V--M~Lm~h~d 460 (480)
T 1ho8_A 426 LNDITHVVELLPESIDVLDKTGGKADI--MELLNHSD 460 (480)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHSHHHHH--HHHTSCSS
T ss_pred cccHHHHHHHCcchhHHHHHcCcHHHH--HHHhcCCC
Confidence 389999999999999999998887543 33334654
Done!