Query 032893
Match_columns 131
No_of_seqs 160 out of 1328
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 11:33:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032893.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032893hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cyoa_ d.120.1.1 (A:) Cytochr 100.0 3.5E-32 2.5E-36 178.2 6.2 80 2-81 4-83 (88)
2 d1euea_ d.120.1.1 (A:) Cytochr 100.0 1.3E-31 9.2E-36 174.9 5.8 79 3-81 5-83 (86)
3 d1cxya_ d.120.1.1 (A:) Cytochr 100.0 1E-30 7.3E-35 168.8 6.6 75 3-77 3-81 (81)
4 d1soxa2 d.120.1.1 (A:3-93) Sul 100.0 4.5E-29 3.3E-33 164.2 8.3 82 3-84 3-87 (91)
5 d1mj4a_ d.120.1.1 (A:) Sulfite 99.9 5.1E-29 3.7E-33 160.3 5.4 76 2-77 2-80 (80)
6 d1kbia2 d.120.1.1 (A:1-97) Fla 99.9 1.4E-28 1E-32 163.6 6.7 82 2-84 8-91 (97)
7 d1t0ga_ d.120.1.2 (A:) Putativ 98.8 1E-09 7.4E-14 72.9 2.2 55 3-59 10-68 (109)
8 d1ho8a_ a.118.1.9 (A:) Regulat 25.1 2 0.00015 33.5 -3.2 34 28-63 424-457 (477)
9 d1iz6a1 b.34.5.2 (A:2-70) Euka 17.9 32 0.0023 18.9 1.9 24 17-40 13-36 (69)
10 d2eifa1 b.34.5.2 (A:1-73) Euka 17.8 30 0.0022 19.4 1.8 23 17-39 17-39 (73)
No 1
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97 E-value=3.5e-32 Score=178.25 Aligned_cols=80 Identities=48% Similarity=0.855 Sum_probs=76.7
Q ss_pred CCccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCCC
Q 032893 2 AKVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSSS 81 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~~ 81 (131)
.|.||++||++||+.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..+||..|+++|++|+||+|.+++
T Consensus 4 ~k~yt~~Ev~~H~~~~d~Wvii~g~VYDvT~f~~~HPGG~~~i~~~aG~D~T~~F~~~~hs~~a~~~l~~~~IG~l~~~~ 83 (88)
T d1cyoa_ 4 VKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHPDD 83 (88)
T ss_dssp CCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEECGGG
T ss_pred cccccHHHHHhhCCCCCeEEEECCEEEecchhhcccCCchHHHHHHcCCchHHHHHHHCCCHHHHHHHHcCccEEECccc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999998654
No 2
>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.97 E-value=1.3e-31 Score=174.88 Aligned_cols=79 Identities=47% Similarity=0.934 Sum_probs=76.1
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHHHHhhhhceeeeecCCC
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSAREMMEKYHIGEIDSSS 81 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a~~~l~~~~VG~l~~~~ 81 (131)
+.||++||++||+.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..+||..++++|++|+||.|+.++
T Consensus 5 ~~yt~~Ev~~H~~~~d~Wvii~g~VYDvT~f~~~HPGG~~~i~~~aG~D~T~~f~~~hhs~~a~~~l~~~~IG~l~~~~ 83 (86)
T d1euea_ 5 TYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPDAREMLKQYYIGDVHPND 83 (86)
T ss_dssp CEECHHHHTTCEETTEEEEEETTEEEECGGGGGGCTTCSHHHHTTTTSBCHHHHHHHTCCHHHHHHGGGGEEEEECGGG
T ss_pred CEECHHHHHhhCCCCCEEEEECCEEEecceeeeccCcchHHHHHHCCcCHHHHHHHhCCCHHHHHHHHhCcceEECccc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999998654
No 3
>d1cxya_ d.120.1.1 (A:) Cytochrome b558 {Ectothiorhodospira vacuolata [TaxId: 1054]}
Probab=99.96 E-value=1e-30 Score=168.78 Aligned_cols=75 Identities=36% Similarity=0.813 Sum_probs=71.8
Q ss_pred CccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcC----CCHHHHHhhhhceeeee
Q 032893 3 KVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVG----HSDSAREMMEKYHIGEI 77 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~----hs~~a~~~l~~~~VG~l 77 (131)
+.||++||++|+++++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+..+ ||..|+++|++|+||.|
T Consensus 3 p~~t~~ev~~H~~~~d~Wivi~g~VYDvT~f~~~HPGG~~~l~~~aGkD~t~~F~~~~~~~~Hs~~a~~~L~~~~IG~L 81 (81)
T d1cxya_ 3 PVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLIGTL 81 (81)
T ss_dssp CBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTEEEEC
T ss_pred CccCHHHHHhhCCCCCEEEEECCEEEeccceeecCCCcHHHHHHHcCCcchHHHHhcCCcccCCHHHHHHHHhCCCeeC
Confidence 6799999999999999999999999999999999999999999999999999998764 99999999999999986
No 4
>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.95 E-value=4.5e-29 Score=164.17 Aligned_cols=82 Identities=27% Similarity=0.530 Sum_probs=73.7
Q ss_pred CccCHHHHhcccCCCC-eEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhh--hcCCCHHHHHhhhhceeeeecC
Q 032893 3 KVHDFQEVAKHNNRDD-CWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFE--DVGHSDSAREMMEKYHIGEIDS 79 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~~-~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~--~~~hs~~a~~~l~~~~VG~l~~ 79 (131)
+.||++||++||+.++ |||+|+|+|||||+|+..||||.++|+.++|+|+|+.|. ..+|+..++++|++|+||.|..
T Consensus 3 P~~T~~Ev~~H~~~~~~~Wiii~g~VYDvT~f~~~HPGG~~~i~~~~G~D~t~~~~~~~~~~~~~a~~~l~~~~IG~l~~ 82 (91)
T d1soxa2 3 PEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYKVGELSP 82 (91)
T ss_dssp CEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSBSHHHHHHSGGGGSHHHHHHHHTTEEEEECC
T ss_pred CccCHHHHHHhCCCCCceEEEECCEEEeccceecccCCcHHHHHHHcCCcccHhHhhccccCcHHHHHHHHcCeeEEecC
Confidence 6799999999998776 999999999999999999999999999999999999765 4468999999999999999987
Q ss_pred CCCCC
Q 032893 80 SSVPA 84 (131)
Q Consensus 80 ~~~~~ 84 (131)
.+.|.
T Consensus 83 ~~~~~ 87 (91)
T d1soxa2 83 DEAPA 87 (91)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 65443
No 5
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=5.1e-29 Score=160.33 Aligned_cols=76 Identities=28% Similarity=0.573 Sum_probs=68.8
Q ss_pred CCccCHHHHhcccCC-CCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhh--hcCCCHHHHHhhhhceeeee
Q 032893 2 AKVHDFQEVAKHNNR-DDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFE--DVGHSDSAREMMEKYHIGEI 77 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~-~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~--~~~hs~~a~~~l~~~~VG~l 77 (131)
++.||++||++|+++ ++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|. ..+|+..++++|++|+||+|
T Consensus 2 ~~v~T~~Ev~~H~~~~~~~Wiii~g~VYDvT~f~~~HPGG~~~i~~~~G~D~t~~~~~~~~h~s~~a~~~l~~~~IG~L 80 (80)
T d1mj4a_ 2 THIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQSHVRELLAQYKIGEL 80 (80)
T ss_dssp CCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSBSHHHHTTCGGGCSHHHHHHHHTTEEEEC
T ss_pred CccccHHHHHHhCCCCCCeEEEECCEEEeeeeeHhhcCChhHHHHHHcCCCcchhhhcccccCcHHHHHHHHcCcceeC
Confidence 588999999999975 45999999999999999999999999999999999998654 55799999999999999986
No 6
>d1kbia2 d.120.1.1 (A:1-97) Flavocytochrome b2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=1.4e-28 Score=163.59 Aligned_cols=82 Identities=39% Similarity=0.703 Sum_probs=73.7
Q ss_pred CCccCHHHHhcccCCCCeEEEEcCEEEecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCHHH--HHhhhhceeeeecC
Q 032893 2 AKVHDFQEVAKHNNRDDCWLVISGKVYNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSDSA--REMMEKYHIGEIDS 79 (131)
Q Consensus 2 ~~~~t~~ev~~h~~~~~~wvvi~g~VYDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~~a--~~~l~~~~VG~l~~ 79 (131)
.+.||++||++||+.++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+.. |+..+ +.++++|+||.|.+
T Consensus 8 ~~~it~~EV~~H~~~~d~Wvvi~g~VYDvT~f~~~HPGG~~~i~~~aG~D~T~~f~~~-H~~~~~~~~~l~~~~IG~l~~ 86 (97)
T d1kbia2 8 KQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPNVIDKYIAPEKKLGPLQG 86 (97)
T ss_dssp SCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGG-SCTTHHHHHSCGGGEEEEBCS
T ss_pred cCccCHHHHHHhCCCCCEEEEECCEEEecchhhhhCCChHHHHHHHcCccHHHHHHHH-CcHHHHHHHHhhcceeEEeCC
Confidence 3689999999999999999999999999999999999999999999999999999987 77655 45789999999987
Q ss_pred CCCCC
Q 032893 80 SSVPA 84 (131)
Q Consensus 80 ~~~~~ 84 (131)
...|.
T Consensus 87 ~~~~e 91 (97)
T d1kbia2 87 SMPPE 91 (97)
T ss_dssp CCCTT
T ss_pred CCCCc
Confidence 65443
No 7
>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.77 E-value=1e-09 Score=72.89 Aligned_cols=55 Identities=24% Similarity=0.350 Sum_probs=43.8
Q ss_pred CccCHHHHhcccCCC---CeEEEEcCEEEecCcCc-ccCCChHHHHhhhhCCCCchhhhhc
Q 032893 3 KVHDFQEVAKHNNRD---DCWLVISGKVYNVTPFL-EDHPGGDEVLLAATEKDATDDFEDV 59 (131)
Q Consensus 3 ~~~t~~ev~~h~~~~---~~wvvi~g~VYDvT~f~-~~HPGG~~~l~~~aG~D~T~~f~~~ 59 (131)
+.||++||+++++.+ .+||+|+|+|||||.=. -.-|||. -..+||+|+|..|...
T Consensus 10 ~~fT~eeL~~ydG~~~~~piyvAi~G~VyDVt~~~~~ygpgg~--Y~~faG~D~sral~~~ 68 (109)
T d1t0ga_ 10 EEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGD--YSMFAGKDASRALGKM 68 (109)
T ss_dssp EEEEHHHHTTCSSCSSSCCCEEEETTEEEECGGGTTTSTTTCT--TTTTTTEECHHHHHHT
T ss_pred hhCCHHHHHHcCCCCCCccEEEEECCEEEEccCCcceECCCCc--ccccccccHHHHHHhc
Confidence 679999999999854 38999999999999632 2347875 3467999999998654
No 8
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.11 E-value=2 Score=33.48 Aligned_cols=34 Identities=29% Similarity=0.261 Sum_probs=26.0
Q ss_pred EecCcCcccCCChHHHHhhhhCCCCchhhhhcCCCH
Q 032893 28 YNVTPFLEDHPGGDEVLLAATEKDATDDFEDVGHSD 63 (131)
Q Consensus 28 YDvT~f~~~HPGG~~~l~~~aG~D~T~~f~~~~hs~ 63 (131)
||+.+|+..||.|..++.+..+++.-- +-..|..
T Consensus 424 ~DiGefvr~~P~gr~il~~lg~K~~vM--~Lm~h~d 457 (477)
T d1ho8a_ 424 NDITHVVELLPESIDVLDKTGGKADIM--ELLNHSD 457 (477)
T ss_dssp HHHHHHHHHCTTHHHHHHHHSHHHHHH--HHTSCSS
T ss_pred hhHHHHHHHCcchhHHHHHcCcHHHHH--HHhcCCC
Confidence 899999999999999999988875433 3334554
No 9
>d1iz6a1 b.34.5.2 (A:2-70) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=17.90 E-value=32 Score=18.93 Aligned_cols=24 Identities=13% Similarity=0.340 Sum_probs=20.6
Q ss_pred CCeEEEEcCEEEecCcCcccCCCh
Q 032893 17 DDCWLVISGKVYNVTPFLEDHPGG 40 (131)
Q Consensus 17 ~~~wvvi~g~VYDvT~f~~~HPGG 40 (131)
...+|.++|..|=|.++....||-
T Consensus 13 kG~~i~~~g~p~~V~e~~~~kpGk 36 (69)
T d1iz6a1 13 PGRYIIIDDEPCRIVNITVSSPGK 36 (69)
T ss_dssp TTSEEEETTEEEEEEEEEECCCCT
T ss_pred CCCEEEECCEEEEEEEEEEEcCCC
Confidence 358999999999999998888873
No 10
>d2eifa1 b.34.5.2 (A:1-73) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=17.84 E-value=30 Score=19.36 Aligned_cols=23 Identities=17% Similarity=0.364 Sum_probs=20.6
Q ss_pred CCeEEEEcCEEEecCcCcccCCC
Q 032893 17 DDCWLVISGKVYNVTPFLEDHPG 39 (131)
Q Consensus 17 ~~~wvvi~g~VYDvT~f~~~HPG 39 (131)
...++.++|..|-|.++....||
T Consensus 17 kG~~i~~~g~p~~V~e~~~~kpG 39 (73)
T d2eifa1 17 VGQYVMIDGVPCEIVDISVSKPG 39 (73)
T ss_dssp TTSEEEETTEEEEEEEEEECCCC
T ss_pred CCCEEEECCEEEEEEEEEEECCC
Confidence 46899999999999999888888
Done!