BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032895
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 70 VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESV 122
+V V M C C V + L G++ Y +DL S +V G + P E+++++
Sbjct: 7 IVFAVPMECQSCVDSVSSSLKSLNGISKYDIDLKSNLVTTEGSVPPSEIVKAI 59
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKA 125
+L M C C +V+ + + GVT +V+LA + +V+G P +++++V KA
Sbjct: 103 LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKA 157
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKA 125
+L M C C +V+ + + GVT +V+LA + +V+G P +++++V KA
Sbjct: 103 LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKA 157
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVS 123
+ V ++V M C GC RKV + V ++GV+S ++ + V V+G + P +V+ +S
Sbjct: 26 QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMS 81
>sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3
SV=1
Length = 707
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 68 KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
K RV M C CA K EK+V LEGVT KV+ + + V G+
Sbjct: 6 KQTTYRVDGMSCTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYGE 51
>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorhizobium medicae (strain
WSM419) GN=actP PE=1 SV=1
Length = 827
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIP--FEVLESVSKA 125
M C C R+VEK ++ + GV S V+LA++ V + +P VL +V KA
Sbjct: 24 MTCASCVRRVEKAIAAVPGVASANVNLATERATVQFNGVPETTSVLRAVEKA 75
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIP--FEVLESVSKA 125
M C C R+VEK ++ + GV S V+LA++ V D P VL ++ KA
Sbjct: 24 MTCASCVRRVEKAITAVPGVASANVNLATERATVQFDGEPDTLAVLHAIEKA 75
>sp|Q8ZR95|COPA_SALTY Copper-exporting P-type ATPase A OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=copA PE=1 SV=3
Length = 833
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKA 125
+L M C C +V+ + + GVT +V+LA + +V+G +++++V KA
Sbjct: 102 LLLSGMSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKA 156
>sp|Q8Z8S4|COPA_SALTI Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3
SV=3
Length = 833
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKA 125
+L M C C +V+ + + GVT +V+LA + +V+G +++++V KA
Sbjct: 102 LLLSGMSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVEKA 156
>sp|O32220|COPA_BACSU Copper-exporting P-type ATPase A OS=Bacillus subtilis (strain 168)
GN=copA PE=1 SV=2
Length = 802
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 68 KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
K + ++VS M C CA ++EK + ++ GVT V+LA++ VI D
Sbjct: 5 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETSNVIYD 50
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
M C CA ++EK ++K+EGV + V+ A + V V
Sbjct: 82 MTCAACANRIEKRLNKIEGVANAPVNFALETVTV 115
>sp|Q54463|MERP_SHEPU Mercuric transport protein periplasmic component OS=Shewanella
putrefaciens GN=merP PE=3 SV=1
Length = 91
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
PK V L V +M+C C VEK + K++GV+ +V +K+ VV D
Sbjct: 21 PKTVTLEVPTMNCVTCPFTVEKALQKVDGVSKAEVTFKTKLAVVTFD 67
>sp|P37617|ATZN_ECOLI Lead, cadmium, zinc and mercury-transporting ATPase OS=Escherichia
coli (strain K12) GN=zntA PE=1 SV=1
Length = 732
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
M C CARKVE V +L GV +V A++ +VV D
Sbjct: 57 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDAD 93
>sp|P73241|ATCS_SYNY3 Cation-transporting ATPase PacS OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=pacS PE=1 SV=1
Length = 745
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 59 QTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI--GDIIPF 116
QT+ QL+ M C CA +E+ ++K+ GV S +V+ A + VV G+ P
Sbjct: 3 QTINLQLE--------GMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQ 54
Query: 117 EVLESVSKA 125
+ ++V +A
Sbjct: 55 ILTDAVERA 63
>sp|Q60048|CADA_LISMN Probable cadmium-transporting ATPase OS=Listeria monocytogenes
GN=cadA PE=1 SV=1
Length = 711
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 71 VLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHL 127
V RV + C CA K E++V ++EGVT V+ + + V G+ +V ++ + HL
Sbjct: 6 VYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFEHL 63
>sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=copA PE=3 SV=1
Length = 794
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
L+D V Q+L + + + V L ++ M C C+ ++EK +++ +GV V+L ++ ++
Sbjct: 54 LEDFVEQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI 113
>sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1
Length = 794
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
L+D V Q+L + + + V L ++ M C C+ ++EK +++ +GV V+L ++ ++
Sbjct: 54 LEDFVEQIQSLGYDVAVEQVELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALI 113
>sp|P30336|CADA_BACPE Probable cadmium-transporting ATPase OS=Bacillus pseudofirmus
(strain OF4) GN=cadA PE=3 SV=2
Length = 723
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 78 CNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLF 128
C CA K EK+V +L GV KV+ + + V G+ +E + KA F
Sbjct: 23 CANCAGKFEKNVKQLSGVEDAKVNFGASKIAVYGN----ATIEELEKAGAF 69
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum
GN=atox1 PE=3 SV=2
Length = 67
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 74 VSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMV 107
V M C GC++ V +SK++GV++ ++DL +K V
Sbjct: 7 VDMTCGGCSKAVNAILSKIDGVSNIQIDLENKKV 40
>sp|P58341|ATCU1_RHIME Copper-transporting ATPase 1 OS=Rhizobium meliloti (strain 1021)
GN=actP1 PE=3 SV=1
Length = 826
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
M C C R+VEK +S + GV S V+LA++ V
Sbjct: 24 MTCASCVRRVEKAISAVPGVASATVNLATERASV 57
>sp|P20021|CADA1_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus
GN=cadA PE=3 SV=1
Length = 727
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 65 LKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVS 123
++ +M V RV C CA K EK+V K+ GV KV+ + + V G+ +E +
Sbjct: 9 MEEEMNVYRVQGFTCANCAGKFEKNVKKIPGVQDAKVNFGASKIDVYGN----ASVEELE 64
Query: 124 KAHLF 128
KA F
Sbjct: 65 KAGAF 69
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4
Length = 1465
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+V LRV M C C +E V KL+GV KV L+++ V+
Sbjct: 144 VVKLRVEGMTCQSCVSSIEGKVRKLQGVVRVKVSLSNQEAVI 185
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 74 VSMHCNGCARKVEKHVSKLEGVTSYKVDL 102
+ M C C + +E +S L+G+ S KV L
Sbjct: 65 LGMTCQSCVKSIEDRISNLKGIISMKVSL 93
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
M C C +E +S+LEGV V LA V+
Sbjct: 368 MTCASCVHSIEGMISQLEGVQQISVSLAEGTATVL 402
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 65 LKPKMVVLRVS-----MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
+ P M V V+ M CN C +E+ + K+ GV KV L K +I D
Sbjct: 1 MDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYD 53
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLAS 104
M CN C + +E +SK GV S +V LA+
Sbjct: 386 MTCNSCVQSIEGVISKKPGVKSIRVSLAN 414
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 70 VVLRVS---MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
VVL++ M C+ C +E + KL+GV KV L ++ ++
Sbjct: 171 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIV 214
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2
SV=1
Length = 1451
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+V LRV M C C +E + KL+GV KV L+++ V+
Sbjct: 143 VVKLRVEGMTCQSCVSSIEGKIRKLQGVVRVKVSLSNQEAVI 184
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 70 VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDL 102
VV + M C+ C + +E +S L+G+ S KV L
Sbjct: 60 VVSILGMTCHSCVKSIEDRISSLKGIVSIKVSL 92
>sp|O29777|COPA_ARCFU Probable copper-exporting P-type ATPase A OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=copA PE=1 SV=1
Length = 804
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 62 AFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEV 118
A + P +RV+ M C C + +E V LEGV +V+LA++ + D I FE
Sbjct: 10 ASKTPPMERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFET 69
Query: 119 LESV 122
++ V
Sbjct: 70 IKRV 73
>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2
Length = 1462
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+V LRV M C C +E + KL+GV KV L+++ V+
Sbjct: 154 VVKLRVEGMTCQSCVSSIEGKIRKLQGVVRIKVSLSNQEAVI 195
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 70 VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDL 102
VV + M C+ C + +E +S L+G+ + KV L
Sbjct: 71 VVNILGMTCHSCVKSIEDRISSLKGIVNIKVSL 103
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 32.3 bits (72), Expect = 0.98, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
M C C R +E+ + K+ GV KV L K +I D
Sbjct: 17 MTCISCVRTIEQQIGKVNGVHHIKVSLEEKSATIIYD 53
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
M+ ++V M C+ C +E V KL+GV KV L ++ ++
Sbjct: 172 MLKMKVEGMTCHSCTSTIEGKVGKLQGVQRIKVSLDNQEATIV 214
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLAS 104
M CN C + +E +SK GV S V LA+
Sbjct: 386 MTCNSCVQSIEGVISKKPGVKSIHVSLAN 414
>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1
Length = 1505
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 74 VSMHCNGCARKVEKHVSKLEGVTSYKVDL 102
V M C C + +E VS L+G+ S KV L
Sbjct: 120 VGMTCQSCVKSIEGRVSSLKGIVSIKVSL 148
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+V LRV M C C +E + KL+GV +V L+++ V+
Sbjct: 199 VVKLRVEGMTCQSCVSSIEGKIGKLQGVMRVRVSLSNQEAVI 240
>sp|Q8ZCA7|COPA_YERPE Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3
SV=1
Length = 961
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIG 111
+L M C C KV+ + +++GV +V+LA + +V G
Sbjct: 230 LLLTGMSCASCVSKVQNALQRVDGVQVARVNLAERSALVTG 270
>sp|P37386|CADA2_STAAU Probable cadmium-transporting ATPase OS=Staphylococcus aureus
GN=cadA PE=3 SV=1
Length = 804
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 78 CNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLF 128
C CA K EK+V +L GV KV+ + + V G +E + KA F
Sbjct: 22 CANCAGKFEKNVKELSGVHDAKVNFGASKIDVFGS----ATVEDLEKAGAF 68
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 78 CNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLF 128
C CA K EK+V +L GV KV+ + + V G+ +E + KA F
Sbjct: 100 CANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGN----ASVEELEKAGAF 146
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
M C C R +E+ + K+ GV KV L K VI
Sbjct: 17 MTCISCVRTIEQQIGKVNGVHHIKVSLEEKSATVI 51
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 69 MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
++ +RV M C+ C +E V KL+GV KV L ++ ++
Sbjct: 172 LLKMRVEGMTCHSCTSTIEGKVGKLQGVQRIKVSLDNQEATIV 214
>sp|O32219|CADA_BACSU Cadmium, zinc and cobalt-transporting ATPase OS=Bacillus subtilis
(strain 168) GN=cadA PE=1 SV=1
Length = 702
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
+ C+ CARK+E V ++G+ V+ A+ + V D
Sbjct: 13 LDCSNCARKIENGVKGIKGINGCAVNFAASTLTVSAD 49
>sp|Q9ZM70|COPP_HELPJ COP-associated protein OS=Helicobacter pylori (strain J99) GN=copP
PE=4 SV=1
Length = 66
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 75 SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
S+ CN C K+EK V ++EGV+ + K VVV
Sbjct: 9 SITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVV 43
>sp|O32620|COPP_HELFC COP-associated protein OS=Helicobacter felis (strain ATCC 49179 /
NCTC 12436 / CS1) GN=copP PE=4 SV=1
Length = 66
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
M C C K+EK V +LEGV+ VDL + V V
Sbjct: 10 MTCQHCVDKIEKFVGELEGVSYIGVDLDKQSVQV 43
>sp|Q4L971|COPZ_STAHJ Copper chaperone CopZ OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=copZ PE=3 SV=2
Length = 68
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
M C+ C VE ++KL GVTS +VDL V V D
Sbjct: 11 MSCDHCRNAVESALAKLNGVTSAEVDLDKNQVRVDYD 47
>sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MW2) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MSSA476) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300) GN=copA PE=3 SV=1
Length = 802
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K++GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVAVETVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
>sp|Q6GIX1|CADA_STAAR Probable cadmium-transporting ATPase OS=Staphylococcus aureus
(strain MRSA252) GN=cadA PE=3 SV=1
Length = 726
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 78 CNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
C CA K EK+V +L GV KV+ + + V G+
Sbjct: 22 CANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGN 56
>sp|Q9KPZ7|COPA_VIBCH Copper-exporting P-type ATPase A OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=copA PE=3
SV=1
Length = 915
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 56 SGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIG 111
+ +QTL+ +K M C C VEK + +EGV S +V+L + +V G
Sbjct: 169 ASSQTLSLLIK--------GMTCASCVASVEKALLSVEGVQSAQVNLTEQSALVRG 216
>sp|P71365|Y1050_HAEIN Uncharacterized protein HI_1050 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1050 PE=4 SV=1
Length = 92
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
+ K +VL+V M+C CA V K + + GV S K + +V V+ D
Sbjct: 22 ETKQIVLKVKEMNCQLCAYLVNKELRNINGVISTKASIKDGLVTVVED 69
>sp|Q59207|FIXI_BRAJA Nitrogen fixation protein FixI OS=Bradyrhizobium japonicum (strain
USDA 110) GN=fixI PE=3 SV=1
Length = 730
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 76 MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+HC GC K+E+ +S + VT +V+L + V +
Sbjct: 28 VHCAGCMAKIERGLSAIPDVTLARVNLTDRRVAL 61
>sp|Q6AJ53|MURG_DESPS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Desulfotalea psychrophila (strain LSv54 /
DSM 12343) GN=murG PE=3 SV=1
Length = 369
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MGNLSLGKILDCLCISSPGSCSCF 24
+ N L K++D +C+S P S SCF
Sbjct: 135 LANRKLAKLVDRVCVSLPASASCF 158
>sp|P49015|ATP7A_CRIGR Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus
GN=ATP7A PE=2 SV=1
Length = 1476
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 65 LKPKMVVLRVS-----MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
++P M V V+ M C C R +E+ + K G+ KV L K +I D
Sbjct: 1 MEPSMDVNSVTISVEGMTCISCVRTIEQKIGKENGIHHIKVSLEEKSATIIYD 53
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 71 VLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
V+ +S M CN C + +E VSK GV S V LA+ V
Sbjct: 379 VINISGMTCNSCVQSIEGVVSKKPGVKSIHVSLANSFGTV 418
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 70 VVLRVS---MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI 110
VVL++ M C+ C E + KL+GV KV L ++ ++
Sbjct: 171 VVLKIKVEGMTCHSCTSTTEGKIGKLQGVQRIKVSLDNQEATIV 214
>sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
N315) GN=copA PE=1 SV=1
Length = 802
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 51 LKDVVSGNQTLAFQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
+++ ++ Q L + + + V L ++ M C C+ ++EK ++K+ GV + V+L ++ V
Sbjct: 55 VQEFINTIQHLGYGVTVETVELDITGMTCAACSSRIEKVLNKMNGVQNATVNLTTEQAKV 114
Query: 110 IGDIIPFE 117
D P E
Sbjct: 115 --DYYPEE 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,277,028
Number of Sequences: 539616
Number of extensions: 1589760
Number of successful extensions: 4470
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 4376
Number of HSP's gapped (non-prelim): 135
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)