Query 032895
Match_columns 131
No_of_seqs 218 out of 1380
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 11:36:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.5 2.7E-14 9.1E-19 87.2 8.0 62 68-130 2-63 (68)
2 3dxs_X Copper-transporting ATP 99.5 4.7E-14 1.6E-18 86.7 8.3 63 68-130 2-68 (74)
3 4a4j_A Pacszia, cation-transpo 99.5 9.6E-14 3.3E-18 84.2 9.1 63 68-130 2-67 (69)
4 3fry_A Probable copper-exporti 99.5 9E-14 3.1E-18 85.8 7.1 61 67-129 4-65 (73)
5 2qif_A Copper chaperone COPZ; 99.4 1.9E-12 6.6E-17 76.5 9.8 64 68-131 2-69 (69)
6 2l3m_A Copper-ION-binding prot 99.4 2.5E-12 8.4E-17 77.4 9.5 64 67-130 4-71 (71)
7 2xmm_A SSR2857 protein, ATX1; 99.4 9.4E-13 3.2E-17 77.4 7.4 61 70-130 3-64 (64)
8 1cc8_A Protein (metallochapero 99.4 2.5E-12 8.6E-17 78.9 9.4 62 68-129 5-67 (73)
9 2ew9_A Copper-transporting ATP 99.4 1.1E-12 3.9E-17 89.8 7.7 79 51-129 55-145 (149)
10 1p6t_A Potential copper-transp 99.4 2.3E-12 7.8E-17 88.7 8.6 80 50-129 56-139 (151)
11 1mwy_A ZNTA; open-faced beta-s 99.4 3.6E-12 1.2E-16 77.5 8.5 63 67-129 2-66 (73)
12 2k2p_A Uncharacterized protein 99.4 1.6E-12 5.6E-17 82.9 7.2 64 67-130 21-85 (85)
13 1osd_A MERP, hypothetical prot 99.4 5.7E-12 2E-16 75.8 9.3 62 68-129 3-68 (72)
14 2xmw_A PACS-N, cation-transpor 99.4 4.7E-12 1.6E-16 75.8 8.7 62 68-129 3-67 (71)
15 1yg0_A COP associated protein; 99.3 5.2E-12 1.8E-16 74.6 8.1 61 69-129 2-65 (66)
16 3cjk_B Copper-transporting ATP 99.3 1.3E-11 4.4E-16 75.2 9.6 61 69-129 3-67 (75)
17 2ldi_A Zinc-transporting ATPas 99.3 5.4E-12 1.8E-16 75.1 7.3 63 68-130 3-69 (71)
18 1q8l_A Copper-transporting ATP 99.3 7.5E-12 2.6E-16 78.6 8.3 65 65-129 6-74 (84)
19 1aw0_A Menkes copper-transport 99.3 6.9E-12 2.3E-16 75.4 7.6 62 68-129 3-68 (72)
20 1cpz_A Protein (COPZ); copper 99.3 8.1E-12 2.8E-16 74.2 7.7 60 71-130 3-66 (68)
21 2roe_A Heavy metal binding pro 99.3 2.9E-12 1E-16 76.6 5.7 60 71-130 3-63 (66)
22 2crl_A Copper chaperone for su 99.3 1.1E-11 3.9E-16 81.0 8.9 64 66-129 17-80 (98)
23 1y3j_A Copper-transporting ATP 99.3 5.3E-12 1.8E-16 77.5 6.5 63 67-129 2-68 (77)
24 2kyz_A Heavy metal binding pro 99.3 6.9E-12 2.4E-16 75.3 6.8 59 70-130 3-62 (67)
25 2g9o_A Copper-transporting ATP 99.3 1.4E-11 4.7E-16 78.9 8.4 62 68-129 3-71 (90)
26 2kt2_A Mercuric reductase; nme 99.3 1.3E-11 4.6E-16 73.8 7.8 59 71-129 3-64 (69)
27 1kvi_A Copper-transporting ATP 99.3 1.1E-11 3.8E-16 76.3 7.3 63 67-129 7-73 (79)
28 1fvq_A Copper-transporting ATP 99.3 2.4E-11 8.3E-16 72.9 8.3 61 69-129 3-66 (72)
29 1opz_A Potential copper-transp 99.3 2.5E-11 8.6E-16 73.4 8.3 63 67-129 5-71 (76)
30 1yjr_A Copper-transporting ATP 99.3 1.6E-11 5.4E-16 74.4 6.7 62 68-129 4-69 (75)
31 2ofg_X Zinc-transporting ATPas 99.2 4.3E-11 1.5E-15 79.6 9.1 63 67-129 7-73 (111)
32 1jww_A Potential copper-transp 99.2 3.5E-11 1.2E-15 73.8 7.4 62 68-129 3-68 (80)
33 2kkh_A Putative heavy metal tr 99.1 2.2E-10 7.4E-15 73.6 8.5 63 67-129 15-81 (95)
34 2aj0_A Probable cadmium-transp 99.1 2.3E-10 8E-15 69.0 7.2 57 69-129 4-61 (71)
35 2rop_A Copper-transporting ATP 99.1 4.5E-10 1.5E-14 81.4 9.0 62 68-129 122-187 (202)
36 2ew9_A Copper-transporting ATP 99.0 6.6E-10 2.3E-14 75.8 7.6 63 67-129 3-69 (149)
37 1qup_A Superoxide dismutase 1 99.0 2E-09 7E-14 80.3 9.4 62 68-129 6-67 (222)
38 1jk9_B CCS, copper chaperone f 98.9 6E-09 2.1E-13 79.0 9.1 62 68-129 7-68 (249)
39 3j09_A COPA, copper-exporting 98.9 5.9E-09 2E-13 89.1 8.7 61 69-129 3-67 (723)
40 1p6t_A Potential copper-transp 98.8 1.3E-08 4.3E-13 69.7 8.2 62 68-129 6-71 (151)
41 2rop_A Copper-transporting ATP 98.8 9.5E-09 3.3E-13 74.3 7.2 59 68-126 20-82 (202)
42 4gwb_A Peptide methionine sulf 86.8 1.4 4.8E-05 31.1 5.4 45 79-123 9-71 (168)
43 1fvg_A Peptide methionine sulf 86.1 3.4 0.00012 29.9 7.3 53 67-124 43-117 (199)
44 3lvj_C Sulfurtransferase TUSA; 84.1 4.1 0.00014 24.8 6.1 52 69-129 10-64 (82)
45 1jdq_A TM006 protein, hypothet 83.3 4.6 0.00016 25.6 6.3 51 70-129 27-80 (98)
46 3bqh_A PILB, peptide methionin 82.1 2.3 7.8E-05 30.7 4.9 44 79-122 9-74 (193)
47 2j89_A Methionine sulfoxide re 81.5 2.5 8.6E-05 31.8 5.1 51 68-123 95-167 (261)
48 1ff3_A Peptide methionine sulf 79.8 3.9 0.00013 29.8 5.6 53 67-124 42-116 (211)
49 1nwa_A Peptide methionine sulf 79.4 3.2 0.00011 30.1 5.0 45 79-123 32-94 (203)
50 3e0m_A Peptide methionine sulf 78.5 6 0.00021 30.6 6.5 45 79-123 9-73 (313)
51 3hz7_A Uncharacterized protein 76.0 5.1 0.00018 24.8 4.6 51 71-129 3-56 (87)
52 3cq1_A Putative uncharacterize 76.0 4.6 0.00016 25.5 4.5 36 69-104 42-83 (103)
53 1uwd_A Hypothetical protein TM 70.7 7.1 0.00024 24.6 4.5 36 69-104 43-84 (103)
54 1je3_A EC005, hypothetical 8.6 70.4 5 0.00017 25.5 3.6 52 69-129 27-81 (97)
55 3bpd_A Uncharacterized protein 66.7 15 0.00052 23.5 5.3 60 68-128 7-75 (100)
56 2jsx_A Protein NAPD; TAT, proo 66.1 22 0.00074 22.3 6.5 43 81-123 18-61 (95)
57 2x3d_A SSO6206; unknown functi 63.8 24 0.00082 22.5 5.7 59 69-128 6-74 (96)
58 2raq_A Conserved protein MTH88 61.3 25 0.00087 22.4 5.5 60 68-128 7-75 (97)
59 1pav_A Hypothetical protein TA 59.5 4.8 0.00016 24.1 1.8 50 71-129 8-60 (78)
60 3lno_A Putative uncharacterize 59.5 9.5 0.00032 24.3 3.4 37 69-105 45-88 (108)
61 3pim_A Peptide methionine sulf 58.0 6.2 0.00021 28.2 2.5 33 68-105 20-54 (187)
62 1owx_A Lupus LA protein, SS-B, 32.7 1E+02 0.0035 20.0 6.9 56 70-125 19-76 (121)
63 2fi0_A Conserved domain protei 23.6 37 0.0013 20.3 1.6 18 113-130 61-78 (81)
64 2v50_A Multidrug resistance pr 22.6 1.6E+02 0.0055 25.8 6.0 44 82-125 159-210 (1052)
65 4dx5_A Acriflavine resistance 21.9 1.7E+02 0.0058 25.6 6.0 43 82-124 159-209 (1057)
66 1kaf_A Transcription regulator 21.3 1.2E+02 0.004 19.7 3.7 39 91-130 42-80 (108)
67 2w7v_A General secretion pathw 20.0 54 0.0018 20.6 1.9 44 85-129 17-66 (95)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.54 E-value=2.7e-14 Score=87.18 Aligned_cols=62 Identities=29% Similarity=0.458 Sum_probs=57.7
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
.++.|.|||+|++|+++|+++|++++|| ++.+|+.+++++|.++.++++|.++|+++||.+.
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~ 63 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVS 63 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEE
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceE
Confidence 3567888999999999999999999999 9999999999999998899999999999999863
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.53 E-value=4.7e-14 Score=86.75 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=58.5
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCcC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~~ 130 (131)
+++.|.| ||+|++|++.|+++|++++||.++.+|+.+++++|.++ .+.++|.++|+++||.+.
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 68 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAE 68 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceE
Confidence 5688999 99999999999999999999999999999999999986 478999999999999753
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.52 E-value=9.6e-14 Score=84.15 Aligned_cols=63 Identities=27% Similarity=0.496 Sum_probs=58.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCcC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~~ 130 (131)
+++.|.| ||+|++|++.|+++|.+++||.++.+|+.+++++|.++ .++++|.++|++.||.+.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~ 67 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHAR 67 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceE
Confidence 4678999 99999999999999999999999999999999999974 578999999999999763
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.48 E-value=9e-14 Score=85.79 Aligned_cols=61 Identities=23% Similarity=0.340 Sum_probs=58.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
+.+++|.| ||+|++|+++|+++|++ +||..+.+|+.+++++|.++ +++.|.++|+++||.+
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~ 65 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQA 65 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCce
Confidence 46789999 99999999999999999 99999999999999999999 8899999999999975
No 5
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.43 E-value=1.9e-12 Score=76.45 Aligned_cols=64 Identities=25% Similarity=0.421 Sum_probs=58.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCcCC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFYKR 131 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~~~ 131 (131)
.+..|.| ||+|++|++.|++.|.+++||.++.+|+..+++.|.++ ...+.|.+.|.+.||.+.|
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 69 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVAK 69 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEECC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccC
Confidence 3567999 99999999999999999999999999999999999986 3568899999999998765
No 6
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.41 E-value=2.5e-12 Score=77.36 Aligned_cols=64 Identities=27% Similarity=0.411 Sum_probs=58.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCcC
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~~ 130 (131)
+.++.|.| ||+|++|++.|+++|.+++||..+.+|+..+++.|.++ ...+.|.+.|.++||.++
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 71 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDVQ 71 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 35678999 99999999999999999999999999999999999986 357889999999999763
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.41 E-value=9.4e-13 Score=77.44 Aligned_cols=61 Identities=25% Similarity=0.388 Sum_probs=57.0
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 70 VVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 70 ~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
..|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.+..+.+.|.++|+++||.++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~~ 64 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEVE 64 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCCC
Confidence 56899 99999999999999999999999999999999999877788999999999999864
No 8
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.40 E-value=2.5e-12 Score=78.89 Aligned_cols=62 Identities=29% Similarity=0.403 Sum_probs=58.1
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCC-CeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKLE-GVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l~-GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.|.|+|++|+++|+++|.+++ ||.++.+|+.+++++|.+..+.++|.++|++.||.+
T Consensus 5 ~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~ 67 (73)
T 1cc8_A 5 KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEV 67 (73)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCE
T ss_pred eEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCc
Confidence 56778888999999999999999999 999999999999999998888899999999999975
No 9
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.38 E-value=1.1e-12 Score=89.79 Aligned_cols=79 Identities=22% Similarity=0.375 Sum_probs=65.5
Q ss_pred hhhhhhhhhhcccccC--------ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHH
Q 032895 51 LKDVVSGNQTLAFQLK--------PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEV 118 (131)
Q Consensus 51 ~~~~~~~~~~~~~~~~--------~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I 118 (131)
...+...+...||... ..++.|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.|+ ..+++|
T Consensus 55 ~~~i~~~i~~~G~~~~~~~~~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i 134 (149)
T 2ew9_A 55 PLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDI 134 (149)
T ss_dssp HHHHHHHHHHHTCEEEECSCSCCSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHH
T ss_pred HHHHHHHHhcCCCceEeecccccccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHH
Confidence 3344445555665431 24688999 99999999999999999999999999999999999987 367899
Q ss_pred HHHHHhCCCCc
Q 032895 119 LESVSKAHLFY 129 (131)
Q Consensus 119 ~~~I~~~Gy~~ 129 (131)
.++|.++||.+
T Consensus 135 ~~~i~~~Gy~~ 145 (149)
T 2ew9_A 135 IKIIEEIGFHA 145 (149)
T ss_dssp HHHHHHHTCEE
T ss_pred HHHHHhCCCce
Confidence 99999999975
No 10
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.37 E-value=2.3e-12 Score=88.71 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=68.6
Q ss_pred chhhhhhhhhhcccccCceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhC
Q 032895 50 RLKDVVSGNQTLAFQLKPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKA 125 (131)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~ 125 (131)
....+...+...||+....++.|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.|+ ..++.|.++|+++
T Consensus 56 ~~~~i~~~i~~~G~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 135 (151)
T 1p6t_A 56 GTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKL 135 (151)
T ss_dssp CHHHHHHHHHHHTCEECCEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCcccccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHc
Confidence 3344445556677766667889999 99999999999999999999999999999999999987 3678999999999
Q ss_pred CCCc
Q 032895 126 HLFY 129 (131)
Q Consensus 126 Gy~~ 129 (131)
||.+
T Consensus 136 Gy~~ 139 (151)
T 1p6t_A 136 GYKL 139 (151)
T ss_dssp TCCE
T ss_pred CCCe
Confidence 9975
No 11
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.37 E-value=3.6e-12 Score=77.53 Aligned_cols=63 Identities=35% Similarity=0.454 Sum_probs=57.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC-CHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI-IPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~-~~~~I~~~I~~~Gy~~ 129 (131)
+.++.|.| ||+|++|++.|++.|.+++||.++.+|+.++++.|.++. ..+.|.+.|.++||.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~ 66 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSL 66 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcc
Confidence 45678999 999999999999999999999999999999999999874 3677899999999975
No 12
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.37 E-value=1.6e-12 Score=82.93 Aligned_cols=64 Identities=23% Similarity=0.240 Sum_probs=59.2
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
..+..|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.++.+++.|.++|+++||.+.
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~~ 85 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTPE 85 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCCC
Confidence 35678999 99999999999999999999999999999999999988888999999999999863
No 13
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.37 E-value=5.7e-12 Score=75.79 Aligned_cols=62 Identities=29% Similarity=0.424 Sum_probs=57.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.| ||+|++|++.|++.|.+++||.++.+|+..+++.|.++ ...+.|.+.|.+.||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPS 68 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCe
Confidence 4678999 99999999999999999999999999999999999986 35688999999999975
No 14
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.36 E-value=4.7e-12 Score=75.84 Aligned_cols=62 Identities=27% Similarity=0.487 Sum_probs=56.4
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
+++.|.| ||+|++|++.|+++|.+++||.++.+|+..+++.|.++ .+.+.|.+.|.+.||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 67 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHA 67 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 4578999 99999999999999999999999999999999999987 45688999999999975
No 15
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.35 E-value=5.2e-12 Score=74.60 Aligned_cols=61 Identities=33% Similarity=0.406 Sum_probs=55.7
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
+..|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.++ .+.+.|.+.|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 357889 99999999999999999999999999999999999987 36788999999999975
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.34 E-value=1.3e-11 Score=75.16 Aligned_cols=61 Identities=30% Similarity=0.488 Sum_probs=56.2
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC---CHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI---IPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~---~~~~I~~~I~~~Gy~~ 129 (131)
++.|.| ||+|++|++.|++.|.+++||.++.+|+..+++.|.++. ..+.|.+.|.++||.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 67 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 67 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCce
Confidence 467999 999999999999999999999999999999999999863 5688999999999975
No 17
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.33 E-value=5.4e-12 Score=75.15 Aligned_cols=63 Identities=24% Similarity=0.435 Sum_probs=57.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCcC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~~ 130 (131)
.+..|.| ||+|++|++.|++.|.+++||..+.+|+..+++.|.++ ...+.+.+.+.++||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4567999 99999999999999999999999999999999999986 356789999999999764
No 18
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.33 E-value=7.5e-12 Score=78.59 Aligned_cols=65 Identities=22% Similarity=0.388 Sum_probs=58.9
Q ss_pred cCceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 65 LKPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 65 ~~~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
....++.|.| ||+|++|++.|++.|.+++||..+.+|+..+++.|.++ ...+.|.+.|.++||.+
T Consensus 6 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 74 (84)
T 1q8l_A 6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPA 74 (84)
T ss_dssp SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCE
T ss_pred cCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCce
Confidence 3456788999 99999999999999999999999999999999999986 36788999999999975
No 19
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.32 E-value=6.9e-12 Score=75.43 Aligned_cols=62 Identities=27% Similarity=0.386 Sum_probs=56.8
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
++..|.| ||+|++|++.|+++|.+++||.++.+|+..+++.|.++ ...+.|.+.|+++||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDA 68 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCc
Confidence 4578999 99999999999999999999999999999999999987 35688999999999964
No 20
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.32 E-value=8.1e-12 Score=74.18 Aligned_cols=60 Identities=27% Similarity=0.460 Sum_probs=55.2
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCcC
Q 032895 71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 71 ~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~~ 130 (131)
.|.| ||+|++|++.|++.|.+++||.++.+|+..+++.|.++ .+.+.|.+.+.+.||.++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 5889 99999999999999999999999999999999999986 367889999999999753
No 21
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.32 E-value=2.9e-12 Score=76.58 Aligned_cols=60 Identities=28% Similarity=0.433 Sum_probs=54.6
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 71 ~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
.|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|....+.+.|.+.|++.||.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcE
Confidence 5889 99999999999999999999999999999999999544678899999999999753
No 22
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=81.05 Aligned_cols=64 Identities=23% Similarity=0.318 Sum_probs=59.2
Q ss_pred CceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 66 KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 66 ~~~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
...++.|.|.|+|.+|+++|+++|.+++||.++.+|+.+++++|.++...+.|.++|+++||.+
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 80 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQA 80 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCE
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCce
Confidence 3456778889999999999999999999999999999999999999888899999999999974
No 23
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.30 E-value=5.3e-12 Score=77.52 Aligned_cols=63 Identities=22% Similarity=0.327 Sum_probs=57.6
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
++++.|.| ||+|++|++.|+++|.+++||..+.+|+..+++.|.++ ...+.|.+.|.++||.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 68 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGA 68 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCce
Confidence 46788999 99999999999999999999999999999999999986 35688999999999975
No 24
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.30 E-value=6.9e-12 Score=75.25 Aligned_cols=59 Identities=31% Similarity=0.509 Sum_probs=54.8
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 70 VVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 70 ~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
..|.| ||+|++|++.|+++|.++ ||..+.+|+.++++.|.++.. +.|.++|+++||.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE 62 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence 57899 999999999999999999 999999999999999998865 889999999999764
No 25
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.30 E-value=1.4e-11 Score=78.91 Aligned_cols=62 Identities=21% Similarity=0.418 Sum_probs=56.2
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhC---CCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKA---HLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~---Gy~~ 129 (131)
.++.|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.++ .+.+.|.++|.++ ||.+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~ 71 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRV 71 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEE
Confidence 4678999 99999999999999999999999999999999999986 3568899999999 4864
No 26
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.29 E-value=1.3e-11 Score=73.79 Aligned_cols=59 Identities=22% Similarity=0.295 Sum_probs=54.6
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 71 ~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
.|.| ||+|++|++.|+++|.+++||.++.+|+..+++.|.++ ...+.|.+.|+++||.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~ 64 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKA 64 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCce
Confidence 5889 99999999999999999999999999999999999887 36788999999999975
No 27
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.28 E-value=1.1e-11 Score=76.27 Aligned_cols=63 Identities=29% Similarity=0.471 Sum_probs=57.5
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
..++.|.| ||+|++|++.|+++|.+++||.++.+|+.++++.|.++ ...+.|.++|+++||.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 73 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA 73 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCce
Confidence 35788999 99999999999999999999999999999999999986 35688999999999975
No 28
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.27 E-value=2.4e-11 Score=72.95 Aligned_cols=61 Identities=23% Similarity=0.420 Sum_probs=56.1
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
++.|.| ||+|++|++.|++.|.+++||.++.+|+..+++.|.++ ...+.|.+.|++.||.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 66 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDC 66 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCce
Confidence 567999 99999999999999999999999999999999999886 45688999999999975
No 29
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.27 E-value=2.5e-11 Score=73.37 Aligned_cols=63 Identities=32% Similarity=0.503 Sum_probs=57.2
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
..+..|.| ||+|++|+..|++.|.+++||.++.+|+..+++.|.++ ...+.|.+.|.++||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEE
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCce
Confidence 35678999 99999999999999999999999999999999999986 35788999999999975
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.26 E-value=1.6e-11 Score=74.35 Aligned_cols=62 Identities=23% Similarity=0.371 Sum_probs=56.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC---CHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI---IPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~---~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.| ||+|++|++.|++.|.+++||..+.+|+..+++.|.++. ..+.|.+.|.++||.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 69 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEP 69 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 3578999 999999999999999999999999999999999999873 4577899999999974
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.25 E-value=4.3e-11 Score=79.60 Aligned_cols=63 Identities=24% Similarity=0.402 Sum_probs=57.8
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
+.++.|.| ||+|++|++.|+++|.+++||..+.+|+.++++.|.++ .+.+.|.++|.++||.+
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~ 73 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 73 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCE
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCee
Confidence 45788999 99999999999999999999999999999999999987 35688999999999975
No 32
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.23 E-value=3.5e-11 Score=73.77 Aligned_cols=62 Identities=27% Similarity=0.427 Sum_probs=56.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
.+..|.| ||+|++|++.|++.|.+++||..+.+|+..+++.|.++ ...+.|.+.|.++||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKL 68 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEE
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeE
Confidence 4578999 99999999999999999999999999999999999886 35688999999999964
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.15 E-value=2.2e-10 Score=73.58 Aligned_cols=63 Identities=25% Similarity=0.451 Sum_probs=57.4
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC---CHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI---IPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~---~~~~I~~~I~~~Gy~~ 129 (131)
+.++.|.| ||+|++|+..|+++|..++||..+.+|+..+++.|.++. ....|.+.|.++||.+
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 81 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEA 81 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCE
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCce
Confidence 45678999 999999999999999999999999999999999999863 5788999999999974
No 34
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.12 E-value=2.3e-10 Score=69.05 Aligned_cols=57 Identities=33% Similarity=0.606 Sum_probs=51.0
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
+..|.| ||+|++|++.|+++|.+++||.++.+|+..+++.|.++.. .+.|.++||..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~ 61 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFE 61 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTT
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCc
Confidence 567999 9999999999999999999999999999999999998764 45778889864
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.09 E-value=4.5e-10 Score=81.40 Aligned_cols=62 Identities=26% Similarity=0.454 Sum_probs=57.2
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.| ||+|++|++.|+++|.+++||..+.+|+..+++.|.++ ...+.|.++|.++||.+
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 187 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEA 187 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCE
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCce
Confidence 4678999 99999999999999999999999999999999999986 36788999999999975
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.04 E-value=6.6e-10 Score=75.79 Aligned_cols=63 Identities=25% Similarity=0.442 Sum_probs=57.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 67 ~~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
++++.|.| ||+|++|++.|++.|.+++||..+.+|+.++++.|.++ ...+.+.+.|.+.||.+
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 69 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEA 69 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEE
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCce
Confidence 46788999 99999999999999999999999999999999999886 35678999999999964
No 37
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.00 E-value=2e-09 Score=80.26 Aligned_cols=62 Identities=15% Similarity=0.411 Sum_probs=57.5
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.|.|+|++|+++|+++|++++||.++.+|+.+++++|.+...+++|.++|+++||.+
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a 67 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 67 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCcc
Confidence 45677778999999999999999999999999999999999998888899999999999975
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.91 E-value=6e-09 Score=78.98 Aligned_cols=62 Identities=15% Similarity=0.411 Sum_probs=57.4
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~ 129 (131)
.++.|.|.|+|++|+.+|+++|++++||.++.+|+.+++++|....++++|.++|+++||.+
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a 68 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCC
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCc
Confidence 45667778999999999999999999999999999999999998788899999999999975
No 39
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.87 E-value=5.9e-09 Score=89.06 Aligned_cols=61 Identities=26% Similarity=0.350 Sum_probs=57.0
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
+++|.| ||+|++|+++||++|++++||.++++|+.++++.|.++ .+.+++.++|++.||++
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~ 67 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGV 67 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEE
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcc
Confidence 468999 99999999999999999999999999999999999987 46899999999999975
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.85 E-value=1.3e-08 Score=69.71 Aligned_cols=62 Identities=32% Similarity=0.513 Sum_probs=55.5
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCCCCc
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~Gy~~ 129 (131)
.+..|.| ||+|++|+..|++.|.+++||..+.+++..+++.+.++ .....+.+.+++.||.+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 4677999 99999999999999999999999999999999999876 35678899999999954
No 41
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.82 E-value=9.5e-09 Score=74.31 Aligned_cols=59 Identities=29% Similarity=0.517 Sum_probs=53.8
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhCC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKAH 126 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~---~~~~~I~~~I~~~G 126 (131)
.++.|.| ||+|++|++.|+++|.+++||..+.+++..+++.|.++ .....|.+.|.++|
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~ 82 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALP 82 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSS
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhc
Confidence 4678999 99999999999999999999999999999999999986 35688999999883
No 42
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=86.79 E-value=1.4 Score=31.13 Aligned_cols=45 Identities=27% Similarity=0.337 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCC---------------EEEEEec---CCHHHHHHHHH
Q 032895 79 NGCARKVEKHVSKLEGVTSYKVDLASK---------------MVVVIGD---IIPFEVLESVS 123 (131)
Q Consensus 79 ~~C~~~Ie~~L~~l~GV~~v~vnl~~~---------------~~~V~~~---~~~~~I~~~I~ 123 (131)
++|=|-+|..+.+++||.++.+.+..+ .+.|.+| ++.++|++..-
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 689999999999999999999988775 4567887 46677777653
No 43
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=86.07 E-value=3.4 Score=29.92 Aligned_cols=53 Identities=30% Similarity=0.335 Sum_probs=41.1
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEec---CCHHHHHHHHHh
Q 032895 67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKM-------------------VVVIGD---IIPFEVLESVSK 124 (131)
Q Consensus 67 ~~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~-------------------~~V~~~---~~~~~I~~~I~~ 124 (131)
.+++.|. .+|=|-+|..+.+++||.++.+-+..+. +.|.|| ++.++|++..-+
T Consensus 43 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 43 TQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 3555554 6799999999999999999999877764 667887 466788776643
No 44
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=84.07 E-value=4.1 Score=24.81 Aligned_cols=52 Identities=13% Similarity=0.170 Sum_probs=38.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
..++.. |+.|+.-..++.++|.+++ ....+.|..+ .....|....+..||.+
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~---------~G~~l~V~~dd~~a~~di~~~~~~~G~~~ 64 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQ---------PGETLLIIADDPATTRDIPGFCTFMEHEL 64 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSC---------TTCEEEEEECCTTHHHHHHHHHHHTTCEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCC---------CCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 467888 9999999999999999874 2234455444 34467888889999864
No 45
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=83.27 E-value=4.6 Score=25.63 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=39.4
Q ss_pred EEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 70 VVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 70 ~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
.++.. |+.|+.=..++.++|.+++ ..+.+.|..+ .....|...+++.||.+
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~---------~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v 80 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMK---------PGEILEVWIDYPMSKERIPETVKKLGHEV 80 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCC---------TTCEEEEEESSCTHHHHHHHHHHHSSCCE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCC---------CCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 56888 9999999999999999874 2334555554 23578888899999875
No 46
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=82.12 E-value=2.3 Score=30.68 Aligned_cols=44 Identities=23% Similarity=0.302 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEec---CCHHHHHHHH
Q 032895 79 NGCARKVEKHVSKLEGVTSYKVDLASKM-------------------VVVIGD---IIPFEVLESV 122 (131)
Q Consensus 79 ~~C~~~Ie~~L~~l~GV~~v~vnl~~~~-------------------~~V~~~---~~~~~I~~~I 122 (131)
++|=|-+|..+.+++||.++.+-+..+. +.|.+| ++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 6789999999999999999999877653 567787 4667777765
No 47
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=81.49 E-value=2.5 Score=31.84 Aligned_cols=51 Identities=22% Similarity=0.256 Sum_probs=39.5
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCCE-------------------EEEEec---CCHHHHHHHHH
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKM-------------------VVVIGD---IIPFEVLESVS 123 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~-------------------~~V~~~---~~~~~I~~~I~ 123 (131)
+++.|. .+|=|-+|..+.+++||.++.+.+..+. +.|.|| ++.++|++..-
T Consensus 95 e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 95 QFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp EEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred eEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 455554 6799999999999999999999877664 677887 45677777653
No 48
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=79.81 E-value=3.9 Score=29.83 Aligned_cols=53 Identities=21% Similarity=0.202 Sum_probs=40.4
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhCCCCeeEEEEecCCC-------------------EEEEEec---CCHHHHHHHHHh
Q 032895 67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASK-------------------MVVVIGD---IIPFEVLESVSK 124 (131)
Q Consensus 67 ~~~~~l~VGm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~-------------------~~~V~~~---~~~~~I~~~I~~ 124 (131)
.+++.|. .+|=|-+|..+.+++||.++.+-+..+ .+.|.|| ++.++|++..-+
T Consensus 42 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 42 MEIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred ceEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 3455554 678999999999999999999988754 2567887 466788776644
No 49
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=79.44 E-value=3.2 Score=30.13 Aligned_cols=45 Identities=24% Similarity=0.258 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCC---------------EEEEEec---CCHHHHHHHHH
Q 032895 79 NGCARKVEKHVSKLEGVTSYKVDLASK---------------MVVVIGD---IIPFEVLESVS 123 (131)
Q Consensus 79 ~~C~~~Ie~~L~~l~GV~~v~vnl~~~---------------~~~V~~~---~~~~~I~~~I~ 123 (131)
.+|=|-+|..+.+++||.++.+-+..+ .+.|.|| ++.++|++..-
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 679999999999999999999987765 3467787 46677777653
No 50
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=78.51 E-value=6 Score=30.55 Aligned_cols=45 Identities=31% Similarity=0.339 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHhCCCCeeEEEEecCCCE-----------------EEEEec---CCHHHHHHHHH
Q 032895 79 NGCARKVEKHVSKLEGVTSYKVDLASKM-----------------VVVIGD---IIPFEVLESVS 123 (131)
Q Consensus 79 ~~C~~~Ie~~L~~l~GV~~v~vnl~~~~-----------------~~V~~~---~~~~~I~~~I~ 123 (131)
++|=|-+|..+.+++||.++.+-++.+. +.|++| ++.++|++..-
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 6799999999999999999999887664 567887 46677777653
No 51
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=76.03 E-value=5.1 Score=24.78 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=36.8
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 71 ~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
++.. |+.|+.=..+..++|.+++. ..+.+.|..+ .....|....+..||.+
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~--------~G~~L~V~~dd~~a~~dI~~~~~~~G~~v 56 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGE--------AGGVVTVLVDNDISRQNLQKMAEGMGYQS 56 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGG--------GCCEEEEEESSHHHHHHHHHHHHHHTCEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccC--------CCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 4677 99999999999999998730 1234455544 24567888888888864
No 52
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=76.01 E-value=4.6 Score=25.52 Aligned_cols=36 Identities=25% Similarity=0.530 Sum_probs=26.0
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhCCCCeeEEEEecCC
Q 032895 69 MVVLRVSMHCNGC------ARKVEKHVSKLEGVTSYKVDLAS 104 (131)
Q Consensus 69 ~~~l~VGm~C~~C------~~~Ie~~L~~l~GV~~v~vnl~~ 104 (131)
.+.+.+-+++++| ...|+.+|.+++||.++.+++..
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 4555555555555 56789999999999999887443
No 53
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=70.73 E-value=7.1 Score=24.58 Aligned_cols=36 Identities=28% Similarity=0.447 Sum_probs=24.0
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhCCCCeeEEEEecCC
Q 032895 69 MVVLRVSMHCNGC------ARKVEKHVSKLEGVTSYKVDLAS 104 (131)
Q Consensus 69 ~~~l~VGm~C~~C------~~~Ie~~L~~l~GV~~v~vnl~~ 104 (131)
.+.+.+-++.++| ...++.+|..++||.++++++..
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 3445553444444 45688899999999998887433
No 54
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=70.43 E-value=5 Score=25.46 Aligned_cols=52 Identities=12% Similarity=0.045 Sum_probs=38.2
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 69 ~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
..++.. |+.|+.=..++.++|.+++ ..+.+.|..+ .....|...++..||.+
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~---------~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v 81 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLK---------KGEILEVVSDCPQSINNIPLDARNHGYTV 81 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCC---------SSCEEEEEEBCSSSSCHHHHHHHHHTCSE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCC---------CCCEEEEEECCcchHHHHHHHHHHCCCEE
Confidence 356788 9999999999999999874 2233444444 34567888888889874
No 55
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=66.72 E-value=15 Score=23.54 Aligned_cols=60 Identities=17% Similarity=0.206 Sum_probs=38.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhCCCC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVD-----LASKMV--VVIGD-IIPFEVLESVSKAHLF 128 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vn-----l~~~~~--~V~~~-~~~~~I~~~I~~~Gy~ 128 (131)
+++.|.+ -.+-+. ...+-+.|.+++||..+++. ..+..+ +|.++ ++.++|.++|++.|-.
T Consensus 7 RRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~Ggv 75 (100)
T 3bpd_A 7 RRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGV 75 (100)
T ss_dssp EEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCE
T ss_pred eEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCe
Confidence 3445555 222222 33566778899998877654 344444 44444 7899999999999864
No 56
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=66.10 E-value=22 Score=22.34 Aligned_cols=43 Identities=9% Similarity=0.173 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCCCeeEEEEecCCCEEEEEec-CCHHHHHHHHH
Q 032895 81 CARKVEKHVSKLEGVTSYKVDLASKMVVVIGD-IIPFEVLESVS 123 (131)
Q Consensus 81 C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~-~~~~~I~~~I~ 123 (131)
=...+.+.|.++||+.-..++-..+++.|+.. .+.+++.+.|.
T Consensus 18 ~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 18 RISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp SHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 35677888888888854445555677766654 34555444443
No 57
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=63.77 E-value=24 Score=22.46 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=38.1
Q ss_pred EEEEEE--cCcChhHHHHHHHHHhCCCCeeEEEEe-----cCCCEE--EEEec-CCHHHHHHHHHhCCCC
Q 032895 69 MVVLRV--SMHCNGCARKVEKHVSKLEGVTSYKVD-----LASKMV--VVIGD-IIPFEVLESVSKAHLF 128 (131)
Q Consensus 69 ~~~l~V--Gm~C~~C~~~Ie~~L~~l~GV~~v~vn-----l~~~~~--~V~~~-~~~~~I~~~I~~~Gy~ 128 (131)
++.|.+ .++-+. ...+-+.|.+++||..+++. ..+..+ ++.++ .+.++|.++|++.|-.
T Consensus 6 RlVLDVlKP~h~P~-ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~ 74 (96)
T 2x3d_A 6 RLVLDVLKPIRGTS-IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCA 74 (96)
T ss_dssp EEEEEEEEESSSSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCE
T ss_pred EEEEEcccCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCe
Confidence 444555 223333 23556778899998877654 344444 44454 7899999999999864
No 58
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=61.29 E-value=25 Score=22.40 Aligned_cols=60 Identities=18% Similarity=0.177 Sum_probs=38.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhCCCCeeEEEE-----ecCCCEEE--EEec-CCHHHHHHHHHhCCCC
Q 032895 68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKV-----DLASKMVV--VIGD-IIPFEVLESVSKAHLF 128 (131)
Q Consensus 68 ~~~~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~v-----nl~~~~~~--V~~~-~~~~~I~~~I~~~Gy~ 128 (131)
+++.|.+ -.+-+. ...+-+.|.+++||..+++ |..+..+. +.++ .+.++|.++|++.|-.
T Consensus 7 rRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~ 75 (97)
T 2raq_A 7 IRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGS 75 (97)
T ss_dssp EEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCE
T ss_pred eEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCe
Confidence 3455555 333222 2345667888888877664 44555554 4444 7899999999999864
No 59
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=59.48 E-value=4.8 Score=24.05 Aligned_cols=50 Identities=12% Similarity=0.099 Sum_probs=36.5
Q ss_pred EEEE-cCcChhHHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhCCCCc
Q 032895 71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 71 ~l~V-Gm~C~~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--~~~~~I~~~I~~~Gy~~ 129 (131)
.+.. |+.|+.=..++.++|.+++ ..+.+.|..+ .....|...++..||.+
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~---------~G~~L~V~~dd~~a~~di~~~~~~~G~~~ 60 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAK---------VGEVISVYSTDAGTKKDAPAWIQKSGQEL 60 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSC---------TTCCEECCBSSSCHHHHHHHHHHHHTEEE
T ss_pred EEECCCCCCCHHHHHHHHHHHcCC---------CCCEEEEEECCccHHHHHHHHHHHCCCEE
Confidence 4677 9999999999999999874 2233455444 23477888888888864
No 60
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=59.45 E-value=9.5 Score=24.33 Aligned_cols=37 Identities=22% Similarity=0.423 Sum_probs=24.4
Q ss_pred EEEEEEcCcChhH------HHHHHHHH-hCCCCeeEEEEecCCC
Q 032895 69 MVVLRVSMHCNGC------ARKVEKHV-SKLEGVTSYKVDLASK 105 (131)
Q Consensus 69 ~~~l~VGm~C~~C------~~~Ie~~L-~~l~GV~~v~vnl~~~ 105 (131)
.+.+.+-++.++| ...|+.+| .+++||.++.+++...
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 3444444444444 55688888 8999999888765443
No 61
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=57.96 E-value=6.2 Score=28.24 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=26.6
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhCC--CCeeEEEEecCCC
Q 032895 68 KMVVLRVSMHCNGCARKVEKHVSKL--EGVTSYKVDLASK 105 (131)
Q Consensus 68 ~~~~l~VGm~C~~C~~~Ie~~L~~l--~GV~~v~vnl~~~ 105 (131)
+++.|. ++|=|-+|..+.++ +||.++.+-+..+
T Consensus 20 ~~a~fa-----gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 20 KLITLA-----CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp EEEEEE-----SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred cEEEEe-----cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 455554 67899999999999 9999998877666
No 62
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.66 E-value=1e+02 Score=20.01 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=42.8
Q ss_pred EEEEE-cCcCh-hHHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhC
Q 032895 70 VVLRV-SMHCN-GCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKA 125 (131)
Q Consensus 70 ~~l~V-Gm~C~-~C~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~ 125 (131)
..+.| |+.-. .....|+..+++...|..+.+.....+..|.+...+++..+++..+
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 45667 77766 7788999999998889999998888888999975355555566554
No 63
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.62 E-value=37 Score=20.32 Aligned_cols=18 Identities=0% Similarity=-0.169 Sum_probs=15.7
Q ss_pred CCHHHHHHHHHhCCCCcC
Q 032895 113 IIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 113 ~~~~~I~~~I~~~Gy~~~ 130 (131)
.+++.+++.|.+.||.+.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 578999999999999763
No 64
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=22.58 E-value=1.6e+02 Score=25.83 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCCCeeEEEEecCCCEEEEEec--------CCHHHHHHHHHhC
Q 032895 82 ARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--------IIPFEVLESVSKA 125 (131)
Q Consensus 82 ~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--------~~~~~I~~~I~~~ 125 (131)
.+.+++.|+++|||.++.++-....+.|..| .+.++|.++|+..
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~ 210 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQ 210 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhc
Confidence 4679999999999999998743334455554 4668888888654
No 65
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=21.86 E-value=1.7e+02 Score=25.64 Aligned_cols=43 Identities=14% Similarity=0.276 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCCeeEEEEecCCCEEEEEec--------CCHHHHHHHHHh
Q 032895 82 ARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--------IIPFEVLESVSK 124 (131)
Q Consensus 82 ~~~Ie~~L~~l~GV~~v~vnl~~~~~~V~~~--------~~~~~I~~~I~~ 124 (131)
.+.+++.|+++|||.++.+.-....+.|..| .+..+|.++|+.
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 4688999999999999998644334456554 467888888876
No 66
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=21.29 E-value=1.2e+02 Score=19.66 Aligned_cols=39 Identities=8% Similarity=0.248 Sum_probs=27.2
Q ss_pred CCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhCCCCcC
Q 032895 91 KLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKAHLFYK 130 (131)
Q Consensus 91 ~l~GV~~v~vnl~~~~~~V~~~~~~~~I~~~I~~~Gy~~~ 130 (131)
+..|+....+. ..+...|.+--..+++++.+.++|+.++
T Consensus 42 Rt~GiRqfEi~-n~G~fRI~gYk~se~~~~~f~slGm~~K 80 (108)
T 1kaf_A 42 RTNGIRNFEIN-NNGNMRIFGYKMMEHHIQKFTDIGMSCK 80 (108)
T ss_dssp EETTEEEEEEC-TTSEEEEEEESCCHHHHHHHHTTTCEEE
T ss_pred ccCceeEEEEe-cCCcEEEEEecCCHHHHHHHHhcCceEE
Confidence 34677777774 5666666655566788889999986543
No 67
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=20.00 E-value=54 Score=20.61 Aligned_cols=44 Identities=9% Similarity=0.047 Sum_probs=27.6
Q ss_pred HHHHHhCCCCee--EEEEecCCCEEEEEec----CCHHHHHHHHHhCCCCc
Q 032895 85 VEKHVSKLEGVT--SYKVDLASKMVVVIGD----IIPFEVLESVSKAHLFY 129 (131)
Q Consensus 85 Ie~~L~~l~GV~--~v~vnl~~~~~~V~~~----~~~~~I~~~I~~~Gy~~ 129 (131)
+..++...|++. +++.|-..+.+.+.-. ...+.+.+.+.+ ||.+
T Consensus 17 L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~V 66 (95)
T 2w7v_A 17 LPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNV 66 (95)
T ss_dssp HHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEE
T ss_pred HHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEE
Confidence 455677778876 4555556666665432 235777888865 8865
Done!