Query 032897
Match_columns 131
No_of_seqs 151 out of 1100
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:39:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 2.8E-30 9.7E-35 201.3 12.1 104 22-131 17-138 (245)
2 3d30_A YOAJ, expansin like pro 100.0 8.4E-30 2.9E-34 194.3 10.7 98 21-131 3-106 (208)
3 1n10_A PHL P I, pollen allerge 100.0 1.6E-29 5.3E-34 196.7 11.2 102 22-131 17-138 (241)
4 1wc2_A Endoglucanase; hydrolas 99.9 2.1E-24 7.3E-29 160.3 6.6 107 23-131 13-155 (181)
5 4avr_A PA4485; unknown functio 99.8 1.1E-19 3.7E-24 123.0 12.0 90 25-131 2-94 (95)
6 1bw3_A Barwin, basic barley SE 99.8 4E-21 1.4E-25 135.8 1.5 94 24-131 3-121 (125)
7 2kqa_A Cerato-platanin; elicit 98.8 2.8E-08 9.4E-13 70.1 8.1 67 49-131 50-119 (129)
8 3sul_A Cerato-platanin-like pr 98.7 1.6E-08 5.4E-13 70.9 5.5 67 50-131 45-115 (122)
9 3m3g_A EPL1 protein; fungal, p 98.7 1.3E-08 4.6E-13 71.1 4.8 65 50-131 45-113 (120)
10 3suk_A Cerato-platanin-like pr 98.7 2.2E-08 7.4E-13 70.5 4.9 70 49-131 45-118 (125)
11 3suj_A Cerato-platanin 1; doub 98.7 2.4E-08 8.3E-13 70.4 5.1 71 49-131 44-118 (127)
12 3sum_A Cerato-platanin-like pr 98.6 2.3E-07 7.9E-12 65.9 7.6 63 49-131 48-120 (136)
13 2eng_A Endoglucanase V; cellul 95.9 0.0052 1.8E-07 46.3 3.2 51 51-109 72-123 (210)
14 3nrl_A Uncharacterized protein 71.3 10 0.00036 24.2 5.2 28 55-94 23-50 (81)
15 2hm3_A Nematocyst outer WALL a 35.2 13 0.00045 18.9 0.8 9 94-102 4-12 (31)
16 2vqe_N 30S ribosomal protein S 30.3 18 0.00061 21.7 1.0 36 92-128 18-61 (61)
17 3gmf_A Protein-disulfide isome 30.1 24 0.00082 25.4 1.9 42 86-131 14-58 (205)
18 1xcr_A Hypothetical protein PT 23.7 22 0.00074 28.2 0.6 22 88-117 30-51 (316)
19 4b2v_A S64; toxin, ICK; NMR {S 20.0 19 0.00064 18.5 -0.3 11 63-73 19-29 (32)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=99.97 E-value=2.8e-30 Score=201.27 Aligned_cols=104 Identities=27% Similarity=0.445 Sum_probs=91.4
Q ss_pred CceeeEEEEEeCCCC------CCCCC-CCCc---CCCceEEEeccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEE
Q 032897 22 AYASEGTATFYTPPY------VPSAC-NGYK---NDGVMIAAASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVL 91 (131)
Q Consensus 22 a~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~ 91 (131)
..|+.|+||||+.++ .+||| |++. +++.++||+|+.+|++|..||+||||+|.+ ++.|.+++|+
T Consensus 17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~------~~~C~~~sv~ 90 (245)
T 2hcz_X 17 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE------KPECSGNPVT 90 (245)
T ss_dssp CCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS------SSSBCSSCEE
T ss_pred CceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC------CCccCCCCEE
Confidence 579999999999875 37999 6653 368999999999999999999999999965 3469999999
Q ss_pred EEEeecCCCCCC-CceEcCHHHHHhhcC-------CCCceEEEEEEEC
Q 032897 92 VKIVDLCPAGCQ-ATIDLSQEAFSQIAN-------PDAGKIKIEFNQA 131 (131)
Q Consensus 92 v~V~D~Cp~~C~-~~lDLS~~AF~~la~-------~~~G~v~v~w~~~ 131 (131)
|+|||+||+.++ .|||||+.||++||. .+.|+++|+||||
T Consensus 91 V~VtD~C~C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV 138 (245)
T 2hcz_X 91 VYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRV 138 (245)
T ss_dssp EEEEEECCCTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEE
T ss_pred EEEEeccCCCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEE
Confidence 999999983224 999999999999998 7899999999996
No 2
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=99.96 E-value=8.4e-30 Score=194.34 Aligned_cols=98 Identities=30% Similarity=0.328 Sum_probs=87.8
Q ss_pred cCceeeEEEEEeCCCCCCCCCCCC-cCCCceEEEeccccccCC----CCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEe
Q 032897 21 AAYASEGTATFYTPPYVPSACNGY-KNDGVMIAAASYAIWNNG----AVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIV 95 (131)
Q Consensus 21 ~a~~~~G~aT~Y~~~~~~gaC~~~-~~~~~~~aAls~~~~~~g----~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~ 95 (131)
..+.++|+||||++...+|||+.. .++++++||+|+.+|++| +.||+||||+| .+++|+|+|+
T Consensus 3 ~~~~~~G~aT~Y~~g~~~GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~------------~~gsv~V~v~ 70 (208)
T 3d30_A 3 YDDLHEGYATYTGSGYSGGAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG------------PKGKTTVYVT 70 (208)
T ss_dssp TTCCEEEEEEECSTTSSSCTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE------------TTEEEEEEEE
T ss_pred CCCcEEEEEEEcCCCCCCCcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe------------CCCcEEEEEE
Confidence 456789999999997778999543 456899999999999987 89999999997 2458999999
Q ss_pred ecCCCCCC-CceEcCHHHHHhhcCCCCceEEEEEEEC
Q 032897 96 DLCPAGCQ-ATIDLSQEAFSQIANPDAGKIKIEFNQA 131 (131)
Q Consensus 96 D~Cp~~C~-~~lDLS~~AF~~la~~~~G~v~v~w~~~ 131 (131)
|+|| +|+ +|||||+.||++|+.++.|+++|+|++|
T Consensus 71 D~CP-~C~~~~~DLS~~aF~~la~~~~G~i~v~~~~V 106 (208)
T 3d30_A 71 DLYP-EGARGALDLSPNAFRKIGNMKDGKINIKWRVV 106 (208)
T ss_dssp EECT-TCCTTCEEECHHHHHHHSCGGGSSEEEEEEEE
T ss_pred ECCC-CCCCCeEECCHHHHHHhcccCCCEEEEEEEEe
Confidence 9999 999 9999999999999999999999999986
No 3
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=99.96 E-value=1.6e-29 Score=196.67 Aligned_cols=102 Identities=28% Similarity=0.491 Sum_probs=88.1
Q ss_pred CceeeEEEEEeCCCC------CCCCC-CCCc---CCCceEEEeccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEE
Q 032897 22 AYASEGTATFYTPPY------VPSAC-NGYK---NDGVMIAAASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVL 91 (131)
Q Consensus 22 a~~~~G~aT~Y~~~~------~~gaC-~~~~---~~~~~~aAls~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~ 91 (131)
+.|+.|+||||+.++ .+||| |++. +++.++||+|+.+|++|..||+||||+|.+ ++.|.+++|+
T Consensus 17 ~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~------~~~C~~~~v~ 90 (241)
T 1n10_A 17 DKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK------PEACSGEPVV 90 (241)
T ss_dssp CSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS------STTBCSCCEE
T ss_pred CCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC------CCccCCCCEE
Confidence 579999999999875 47999 6653 368899999999999999999999999965 3469999999
Q ss_pred EEEeecCCCCC--C-CceEcCHHHHHhhcC-------CCCceEEEEEEEC
Q 032897 92 VKIVDLCPAGC--Q-ATIDLSQEAFSQIAN-------PDAGKIKIEFNQA 131 (131)
Q Consensus 92 v~V~D~Cp~~C--~-~~lDLS~~AF~~la~-------~~~G~v~v~w~~~ 131 (131)
|+|||+|+ | + .|||||+.||++||. ++.|+++|+||||
T Consensus 91 V~VtD~C~--C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV 138 (241)
T 1n10_A 91 VHITDDNE--EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRV 138 (241)
T ss_dssp EEEEEECS--SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEEC
T ss_pred EEEeEecC--CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEE
Confidence 99999996 4 3 899999999999998 6899999999997
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.90 E-value=2.1e-24 Score=160.29 Aligned_cols=107 Identities=27% Similarity=0.428 Sum_probs=85.5
Q ss_pred ceeeEEEEEeCCCCCCCCC-CCC-----c---CCCceEEEeccccccCC------CCCCcEEEEEEcCcCCCCCCCCc-c
Q 032897 23 YASEGTATFYTPPYVPSAC-NGY-----K---NDGVMIAAASYAIWNNG------AVCNKSFRVKCTGATNQGTPHPC-R 86 (131)
Q Consensus 23 ~~~~G~aT~Y~~~~~~gaC-~~~-----~---~~~~~~aAls~~~~~~g------~~CG~c~~V~~~~~~~~~~p~~c-~ 86 (131)
.|+.+.||||+.. .+||| |++ + .++.++||||+.+|++| ..||+||||+|.+..-+.-+..| .
T Consensus 13 g~~~A~aT~Yg~~-~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~ 91 (181)
T 1wc2_A 13 GKSCASTTNYHDS-HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE 91 (181)
T ss_dssp TEEEEEEEEECCC-BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred CccccceeEecCC-CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCC
Confidence 5788999999985 68999 672 2 14788999999999997 89999999999652100000112 3
Q ss_pred CCeEEEEEeecCCCC------CC--------------CceEcCHHHHHhhcCCCCceEEEEEEEC
Q 032897 87 GGSVLVKIVDLCPAG------CQ--------------ATIDLSQEAFSQIANPDAGKIKIEFNQA 131 (131)
Q Consensus 87 g~sv~v~V~D~Cp~~------C~--------------~~lDLS~~AF~~la~~~~G~v~v~w~~~ 131 (131)
|++|+|+|||.||+. |+ .||||++.| .+|+....|+++|+||||
T Consensus 92 g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV 155 (181)
T 1wc2_A 92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVV 155 (181)
T ss_dssp TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEE
T ss_pred CCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEE
Confidence 779999999999941 72 499999999 899988999999999997
No 5
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.83 E-value=1.1e-19 Score=122.98 Aligned_cols=90 Identities=23% Similarity=0.252 Sum_probs=78.3
Q ss_pred eeEEEEEeCCCC--CCCCCCCCcCCCceEEEeccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCC
Q 032897 25 SEGTATFYTPPY--VPSACNGYKNDGVMIAAASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGC 102 (131)
Q Consensus 25 ~~G~aT~Y~~~~--~~gaC~~~~~~~~~~aAls~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C 102 (131)
+.|.|+||++.. ..+|||.......++||..+ .+||..++||+.. ||++|+|+|+|+|| -|
T Consensus 2 ~~G~ASwYg~~f~G~~TA~Ge~~~~~~~tAAH~t------lP~gt~vrVtNl~----------nGksVvVrVnDRGP-~~ 64 (95)
T 4avr_A 2 DTGEASYYGSRHAGLRTASGERYNPNAMTAAHRT------LPFGARVRVTNLD----------NRRSVVVRINDRGP-FR 64 (95)
T ss_dssp EEEEEEECCGGGTTSBCTTSCBCCTTSCEEECSS------SCTTCEEEEEETT----------TCCEEEEEEEECCC-CS
T ss_pred CEEEEEEECCccCCCCCCCccCcCCCCCEEEcCC------CCCCcEEEEEECC----------CCcEEEEEEccCCC-CC
Confidence 579999999854 45888777778899999874 3689999999643 79999999999999 77
Q ss_pred C-CceEcCHHHHHhhcCCCCceEEEEEEEC
Q 032897 103 Q-ATIDLSQEAFSQIANPDAGKIKIEFNQA 131 (131)
Q Consensus 103 ~-~~lDLS~~AF~~la~~~~G~v~v~w~~~ 131 (131)
. +.||||++||++|+..+.|+.+|+|+.+
T Consensus 65 ~griIDLS~aAa~~Lg~~~~G~~~V~ve~~ 94 (95)
T 4avr_A 65 RGRIIDVSRKAAEGLGMIRSGVAPVRIESL 94 (95)
T ss_dssp TTEEEEECHHHHHHHTCTTTSCEEEEEEEC
T ss_pred CCCEEEeCHHHHHHhCCcCCCEEEEEEEEe
Confidence 7 8999999999999999999999999864
No 6
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.80 E-value=4e-21 Score=135.76 Aligned_cols=94 Identities=26% Similarity=0.524 Sum_probs=68.7
Q ss_pred eeeEEEEE--eCCCC---------CCCCCCCCcCCCceEEEeccccc---------cCCCCCCcEEEEEEcCcCCCCCCC
Q 032897 24 ASEGTATF--YTPPY---------VPSACNGYKNDGVMIAAASYAIW---------NNGAVCNKSFRVKCTGATNQGTPH 83 (131)
Q Consensus 24 ~~~G~aT~--Y~~~~---------~~gaC~~~~~~~~~~aAls~~~~---------~~g~~CG~c~~V~~~~~~~~~~p~ 83 (131)
+..-+||| |.+.. ..++|+... .+...++++...| ++++.||+|++|++..
T Consensus 3 ~~~~~~ty~~y~~~~~~~~~~~~~~s~~C~t~d-a~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~-------- 73 (125)
T 1bw3_A 3 ANDVRATYHYYRPAQNNWDLGAPAVSAYCATWD-ASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA-------- 73 (125)
T ss_dssp EEEEEEECCCSSCGGGTTCTTSTTTCCTTHHHH-TTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT--------
T ss_pred ccceEEEEEEecCCCcCcccccceeeEeeeccc-CCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC--------
Confidence 34556774 55521 347885322 2222344444444 6788999999999743
Q ss_pred CccCCeEEEEEeecCCCCCCCceEcC-HHHHHhhcC----CCCceEEEEEEEC
Q 032897 84 PCRGGSVLVKIVDLCPAGCQATIDLS-QEAFSQIAN----PDAGKIKIEFNQA 131 (131)
Q Consensus 84 ~c~g~sv~v~V~D~Cp~~C~~~lDLS-~~AF~~la~----~~~G~v~v~w~~~ 131 (131)
+|++|+|+|+|+|| +| +|||| ++||++|+. ++.|+++|+|++|
T Consensus 74 --nGksV~V~VvD~CP-~g--gLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V 121 (125)
T 1bw3_A 74 --TGAQITARIVDQCA-NG--GLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFV 121 (125)
T ss_dssp --TTEEEEEEEEECCS-SS--SCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEE
T ss_pred --CCCEEEEEEEEeCC-CC--CCCCCCHHHHHHHhccCCcccCcEEEEEEEEE
Confidence 68999999999999 65 49999 999999998 6789999999975
No 7
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.77 E-value=2.8e-08 Score=70.14 Aligned_cols=67 Identities=21% Similarity=0.534 Sum_probs=56.7
Q ss_pred ceEEEecc-ccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCceEcCHHHHHhhcC-CCCceE-E
Q 032897 49 VMIAAASY-AIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEAFSQIAN-PDAGKI-K 125 (131)
Q Consensus 49 ~~~aAls~-~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~-~~~G~v-~ 125 (131)
-.|.+... .-|+ .+.||+|+||++ + +|+++.++.+|.-+ +.|+++++||+.|.+ ...|+| +
T Consensus 50 P~IGga~~iagWN-S~~CGtC~~lty--------~---ng~sI~vlaID~A~----~gFnIs~~Amn~LT~G~~lG~V~~ 113 (129)
T 2kqa_A 50 PNVGGIPDIAGWD-SPSCGTCWKVTI--------P---NGNSIFIRGVDSGR----GGFNVNPTAFTKLVGSTEAGRVDN 113 (129)
T ss_dssp SSEEEETTCCSTT-CTTCSCEEEEEE--------T---TTEEEEEEEEEECS----SSEEECHHHHHHHHSSSSSCCBCS
T ss_pred CeeccchhhccCC-CCCCCceEEEEE--------c---CCCEEEEEEEccCC----CceeehHHHHHHhcCCcccCcEeE
Confidence 34555553 4577 799999999997 3 58999999999999 899999999999975 788999 9
Q ss_pred EEEEEC
Q 032897 126 IEFNQA 131 (131)
Q Consensus 126 v~w~~~ 131 (131)
++|++|
T Consensus 114 a~~~qV 119 (129)
T 2kqa_A 114 VNYVQV 119 (129)
T ss_dssp CEEEEC
T ss_pred EEEEEc
Confidence 999986
No 8
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.72 E-value=1.6e-08 Score=70.91 Aligned_cols=67 Identities=21% Similarity=0.447 Sum_probs=55.3
Q ss_pred eEEEecc-ccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCceEcCHHHHHhhcCC---CCceEE
Q 032897 50 MIAAASY-AIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP---DAGKIK 125 (131)
Q Consensus 50 ~~aAls~-~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~---~~G~v~ 125 (131)
+|.+... .-|++ +.||.|+||++.. +|+++.+..+|.-+ ..||++.+||+.|.+- +.|+|+
T Consensus 45 FIGg~~~V~gwnS-~~CGtC~~lty~~----------~g~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V~ 109 (122)
T 3sul_A 45 YVGAVDTITGWNS-ESCGTCYQITWSG----------TGKTIHVVGVDVAG----NGFNVGQRAMDDLTNGQAVALGNID 109 (122)
T ss_dssp EEEEETTCCSTTC-TTTTCEEEEEETT----------TTEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSEEE
T ss_pred ccccccccccCCC-CCCCceEEEEEcC----------CCcEEEEEEEecCC----CceeehHHHHHHhcCCcceecceEe
Confidence 3655554 55766 9999999999731 48999999999999 8899999999999742 459999
Q ss_pred EEEEEC
Q 032897 126 IEFNQA 131 (131)
Q Consensus 126 v~w~~~ 131 (131)
++|++|
T Consensus 110 a~~~qV 115 (122)
T 3sul_A 110 VTATLV 115 (122)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999985
No 9
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.71 E-value=1.3e-08 Score=71.10 Aligned_cols=65 Identities=22% Similarity=0.467 Sum_probs=53.9
Q ss_pred eEEEecc-ccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCceEcCHHHHHhhcC-C--CCceEE
Q 032897 50 MIAAASY-AIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEAFSQIAN-P--DAGKIK 125 (131)
Q Consensus 50 ~~aAls~-~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~-~--~~G~v~ 125 (131)
.|.+... .-|+ .+.||.|+||++ +|++|.|..+|.-+ ..|+++.+||+.|.+ . ..|+|+
T Consensus 45 ~IGg~~~i~gwn-s~~CGtC~~lty------------~g~si~vlaID~a~----~Gfnis~~A~n~LT~G~a~~lG~V~ 107 (120)
T 3m3g_A 45 YIGGAAAVAGWN-SASCGTCWKLQY------------SGHTIYVLAVDHAA----SGFNIALDAMNALTGGQAVQLGRVS 107 (120)
T ss_dssp SEEEETTCCSTT-CTTTTCEEEEEE------------TTEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCEEE
T ss_pred ccccccccccCC-CCCCCceEEEEE------------CCeEEEEEEEecCC----CceeecHHHHHHhhCCcceeeeeEe
Confidence 3555543 4565 499999999996 57999999999999 899999999999974 2 459999
Q ss_pred EEEEEC
Q 032897 126 IEFNQA 131 (131)
Q Consensus 126 v~w~~~ 131 (131)
++|++|
T Consensus 108 a~~~~V 113 (120)
T 3m3g_A 108 ATATQV 113 (120)
T ss_dssp CEEEEE
T ss_pred EEEEEc
Confidence 999885
No 10
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.67 E-value=2.2e-08 Score=70.51 Aligned_cols=70 Identities=21% Similarity=0.330 Sum_probs=55.1
Q ss_pred ceEEEecc-ccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCceEcCHHHHHhhcCC---CCceE
Q 032897 49 VMIAAASY-AIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP---DAGKI 124 (131)
Q Consensus 49 ~~~aAls~-~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~---~~G~v 124 (131)
-.|.+... .-|+ .+.||.|+||++.++ + ..+++.|..+|.-+ ..|+++.+||+.|.+- +.|+|
T Consensus 45 P~IGg~~~i~gwn-S~~CGtC~~lty~g~---~-----~~~si~vlaID~a~----~Gfnis~~Amn~LT~G~a~~lG~V 111 (125)
T 3suk_A 45 PHIGASSDIGGFN-SPACGNCYTISFTFQ---G-----VTRSINLVAIDHAG----NGFNVAQAAMDELTNGNAVALGTI 111 (125)
T ss_dssp TSEEEETTCCSTT-CTTTTCEEEEEEEET---T-----EEEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHCEE
T ss_pred CeeccccccccCC-CCCCCeeEEEEEcCC---C-----cceEEEEEEEecCC----CceeecHHHHHHhcCCcccccceE
Confidence 34555554 4576 499999999998431 0 34899999999999 8899999999999752 45999
Q ss_pred EEEEEEC
Q 032897 125 KIEFNQA 131 (131)
Q Consensus 125 ~v~w~~~ 131 (131)
+++|++|
T Consensus 112 ~~~~~~V 118 (125)
T 3suk_A 112 DVQSQQV 118 (125)
T ss_dssp EEEEEEE
T ss_pred eEEEEEc
Confidence 9999985
No 11
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.67 E-value=2.4e-08 Score=70.41 Aligned_cols=71 Identities=17% Similarity=0.357 Sum_probs=54.8
Q ss_pred ceEEEec-cccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCceEcCHHHHHhhcCC---CCceE
Q 032897 49 VMIAAAS-YAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEAFSQIANP---DAGKI 124 (131)
Q Consensus 49 ~~~aAls-~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la~~---~~G~v 124 (131)
-.|.+.. -.-|+ .+.||.|+||++.+.+ + ..++|.|..+|.-+ ..|+++.+||+.|.+- ..|+|
T Consensus 44 P~IGg~~~i~gwn-s~~CGtC~~lty~g~~--~-----~~~si~vlaID~a~----~Gfnis~~Amn~LT~g~a~~lG~V 111 (127)
T 3suj_A 44 PCIGGSSDIAGYN-SPNCGSCYQLTYSSAH--T-----TPKSIYMVAIDRSA----EGFTASKQAMDDLTNKRAEELGTV 111 (127)
T ss_dssp TSEEEETTCCSTT-CTTTTCEEEEEECCSS--S-----CCEEEEEEEEEECS----SSEEECHHHHHHHHTSCHHHHSSE
T ss_pred CeeccccccccCC-CCCCCceEEEEECCCC--C-----cceEEEEEEEecCC----CceeecHHHHHHhcCCccccceeE
Confidence 3355544 34565 4999999999984311 1 23899999999999 8899999999999742 45999
Q ss_pred EEEEEEC
Q 032897 125 KIEFNQA 131 (131)
Q Consensus 125 ~v~w~~~ 131 (131)
+++|++|
T Consensus 112 ~~~~~~V 118 (127)
T 3suj_A 112 NVDVRKV 118 (127)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999985
No 12
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=98.56 E-value=2.3e-07 Score=65.87 Aligned_cols=63 Identities=16% Similarity=0.267 Sum_probs=52.6
Q ss_pred ceEEEeccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCCCc--eEcCHHHHHhhcCC-------
Q 032897 49 VMIAAASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQAT--IDLSQEAFSQIANP------- 119 (131)
Q Consensus 49 ~~~aAls~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~~~--lDLS~~AF~~la~~------- 119 (131)
-.|.+.. |+ .+.||.|+||++ +|++|.|..+|.-. .. ||+|.+||+.|.+-
T Consensus 48 P~igg~~---wn-s~~CGtCwkLtY------------~G~sI~vlaID~a~----~g~~FnIs~~Amn~LT~G~~a~~a~ 107 (136)
T 3sum_A 48 PHFVAAP---EA-QTECGSCWKLRY------------KGNHAFVTVVDRVE----EANLFVGGTDLVKNLTTFNGAPEGY 107 (136)
T ss_dssp TSEEECC---BT-TBCTTCEEEEEE------------TTEEEEEEEEECCC----STTEEEECHHHHHHHTCBTTBCHHH
T ss_pred Ccccccc---cC-CCCCCceEEEEE------------CCeEEEEEEEecCC----CcceEeehHHHHHHHhCCCccccce
Confidence 3455555 54 589999999996 58999999999998 77 99999999999752
Q ss_pred CCceEEE-EEEEC
Q 032897 120 DAGKIKI-EFNQA 131 (131)
Q Consensus 120 ~~G~v~v-~w~~~ 131 (131)
+.|+|++ +|++|
T Consensus 108 elG~Vda~~~~qV 120 (136)
T 3sum_A 108 DWGTAQLFSAYQV 120 (136)
T ss_dssp HHSEEECSEEEEE
T ss_pred ecceeeeeEEEEc
Confidence 3599999 99885
No 13
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=95.90 E-value=0.0052 Score=46.31 Aligned_cols=51 Identities=24% Similarity=0.311 Sum_probs=33.2
Q ss_pred EEEeccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEEeecCCCCCC-CceEcC
Q 032897 51 IAAASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQ-ATIDLS 109 (131)
Q Consensus 51 ~aAls~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V~D~Cp~~C~-~~lDLS 109 (131)
+||++-.--.....|++||+++-++. ..+||+.+|+|++... .=. +||||.
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~-------~~~GKkmiVQ~TNtG~-Dl~~n~FDl~ 123 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSG-------PVAGKKMVVQSTSTGG-DLGSNHFDLN 123 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSG-------GGTTCEEEEEEEEC------CCEEEEE
T ss_pred eeeeeccCCccccccceeEEEEEcCC-------CcCCCEEEEEEecccC-CCCCCceeEe
Confidence 56665221112357999999997652 2369999999999997 433 899985
No 14
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=71.35 E-value=10 Score=24.15 Aligned_cols=28 Identities=29% Similarity=0.460 Sum_probs=20.3
Q ss_pred ccccccCCCCCCcEEEEEEcCcCCCCCCCCccCCeEEEEE
Q 032897 55 SYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKI 94 (131)
Q Consensus 55 s~~~~~~g~~CG~c~~V~~~~~~~~~~p~~c~g~sv~v~V 94 (131)
+...|..|..||.|++|.- +++.+-.++
T Consensus 23 ~~~~~ygGlHCGE~feV~v------------~~~WiptRi 50 (81)
T 3nrl_A 23 DLESFYGGLHCGECFDVKV------------KDVWVPVRI 50 (81)
T ss_dssp ETTEECCCCCTTCEEEEEE------------TTEEEEEEE
T ss_pred ccccccCCcccccEEEEEE------------CCEEEEEEE
Confidence 3445667899999999984 356666665
No 15
>2hm3_A Nematocyst outer WALL antigen; disulfide, evolution, cysteine rich, structural protein; NMR {Hydra vulgaris} PDB: 2hm4_A 2hm5_A 2hm6_A
Probab=35.16 E-value=13 Score=18.89 Aligned_cols=9 Identities=56% Similarity=1.520 Sum_probs=3.0
Q ss_pred EeecCCCCC
Q 032897 94 IVDLCPAGC 102 (131)
Q Consensus 94 V~D~Cp~~C 102 (131)
|+..||.+|
T Consensus 4 itgtcpsgc 12 (31)
T 2hm3_A 4 ITGTCPSGC 12 (31)
T ss_dssp ---CCCTTC
T ss_pred ccccCCCCc
Confidence 444555444
No 16
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=30.34 E-value=18 Score=21.68 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=28.4
Q ss_pred EEEeecCCCCCC------CceEcCHHHHHhhcC--CCCceEEEEE
Q 032897 92 VKIVDLCPAGCQ------ATIDLSQEAFSQIAN--PDAGKIKIEF 128 (131)
Q Consensus 92 v~V~D~Cp~~C~------~~lDLS~~AF~~la~--~~~G~v~v~w 128 (131)
+.+.++|. -|. ..|.|+.-.|.++|. .-.|+.+-+|
T Consensus 18 ~r~~nRC~-~~GR~rg~iRkfglcR~~FRe~A~~g~lpGv~KasW 61 (61)
T 2vqe_N 18 VRAYTRCV-RCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61 (61)
T ss_dssp GGCCCCCT-TTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred CCCceeee-cCCCCceeeccCceeHHHHHHHHhCCccCCeEeeeC
Confidence 55678898 665 678999999999974 5578887776
No 17
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=30.07 E-value=24 Score=25.36 Aligned_cols=42 Identities=29% Similarity=0.423 Sum_probs=26.2
Q ss_pred cCCeEEEEEee-cCCCCCCCceEcCHHHHHhhc-C-CCCceEEEEEEEC
Q 032897 86 RGGSVLVKIVD-LCPAGCQATIDLSQEAFSQIA-N-PDAGKIKIEFNQA 131 (131)
Q Consensus 86 ~g~sv~v~V~D-~Cp~~C~~~lDLS~~AF~~la-~-~~~G~v~v~w~~~ 131 (131)
+++.++|...| +|| -|.. +.+..+..|. . .+.|.+.+.|+.+
T Consensus 14 ~a~vtivef~D~~Cp-~C~~---~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCP-HCSH---FEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCH-HHHH---HHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCH-HHHH---HHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 34555566677 799 7872 1244555554 2 2689999999853
No 18
>1xcr_A Hypothetical protein PTD012; structural genomics, zinc-containing fold, splice variant, A buffer, metal binding protein; 1.70A {Homo sapiens} SCOP: d.290.1.2
Probab=23.65 E-value=22 Score=28.20 Aligned_cols=22 Identities=45% Similarity=0.842 Sum_probs=17.5
Q ss_pred CeEEEEEeecCCCCCCCceEcCHHHHHhhc
Q 032897 88 GSVLVKIVDLCPAGCQATIDLSQEAFSQIA 117 (131)
Q Consensus 88 ~sv~v~V~D~Cp~~C~~~lDLS~~AF~~la 117 (131)
..|.|.|+| || ||+.+-|.--+
T Consensus 30 ~~v~V~Vvd-CP-------DL~~~Pf~l~~ 51 (316)
T 1xcr_A 30 ADVQVSVVD-CP-------DLTKEPFTFPV 51 (316)
T ss_dssp EEEEEEEEE-CC-------CTTSTTTCCSS
T ss_pred ceeEEEEee-CC-------CCCCCCccCcc
Confidence 579999999 99 88887776543
No 19
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=20.03 E-value=19 Score=18.45 Aligned_cols=11 Identities=27% Similarity=0.827 Sum_probs=8.5
Q ss_pred CCCCcEEEEEE
Q 032897 63 AVCNKSFRVKC 73 (131)
Q Consensus 63 ~~CG~c~~V~~ 73 (131)
.-||+|++-.|
T Consensus 19 wccgrcirnec 29 (32)
T 4b2v_A 19 WCCGRCIRNEC 29 (32)
T ss_dssp CCSSEEETTEE
T ss_pred hhhhHHHHhhh
Confidence 36999997665
Done!