Your job contains 1 sequence.
>032899
MLINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK
ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR
HNGGHGGHNGC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032899
(131 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2183234 - symbol:AT5G19830 species:3702 "Arabi... 496 2.0e-47 1
TAIR|locus:2014134 - symbol:AT1G18440 species:3702 "Arabi... 387 7.2e-36 1
TAIR|locus:2181412 - symbol:AT5G16140 species:3702 "Arabi... 365 1.5e-33 1
TAIR|locus:2173298 - symbol:AT5G38290 species:3702 "Arabi... 365 1.5e-33 1
TIGR_CMR|BA_0050 - symbol:BA_0050 "peptidyl-tRNA hydrolas... 269 2.3e-23 1
TIGR_CMR|CHY_0196 - symbol:CHY_0196 "peptidyl-tRNA hydrol... 257 4.3e-22 1
TIGR_CMR|DET_0595 - symbol:DET_0595 "peptidyl-tRNA hydrol... 249 3.0e-21 1
TIGR_CMR|GSU_0663 - symbol:GSU_0663 "peptidyl-tRNA hydrol... 232 1.9e-19 1
TIGR_CMR|SPO_0811 - symbol:SPO_0811 "peptidyl-tRNA hydrol... 218 5.8e-18 1
UNIPROTKB|P65865 - symbol:pth "Peptidyl-tRNA hydrolase" s... 203 2.3e-16 1
TIGR_CMR|CPS_3559 - symbol:CPS_3559 "peptidyl-tRNA hydrol... 194 2.0e-15 1
TIGR_CMR|CBU_1841 - symbol:CBU_1841 "peptidyl-tRNA hydrol... 188 8.8e-15 1
TIGR_CMR|ECH_0141 - symbol:ECH_0141 "peptidyl-tRNA hydrol... 188 8.8e-15 1
TIGR_CMR|APH_1301 - symbol:APH_1301 "peptidyl-tRNA hydrol... 183 3.0e-14 1
TIGR_CMR|CJE_0357 - symbol:CJE_0357 "peptidyl-tRNA hydrol... 176 1.6e-13 1
DICTYBASE|DDB_G0280507 - symbol:DDB_G0280507 "Peptidyl-tR... 104 3.6e-13 2
TIGR_CMR|SO_1184 - symbol:SO_1184 "peptidyl-tRNA hydrolas... 170 7.1e-13 1
UNIPROTKB|C9J7Z1 - symbol:PTRH1 "Probable peptidyl-tRNA h... 168 1.2e-12 1
UNIPROTKB|Q86Y79 - symbol:PTRH1 "Probable peptidyl-tRNA h... 168 1.2e-12 1
UNIPROTKB|F1RS13 - symbol:PTRH1 "Uncharacterized protein"... 167 1.5e-12 1
UNIPROTKB|F1RS14 - symbol:PTRH1 "Uncharacterized protein"... 167 1.5e-12 1
RGD|1310165 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 hom... 167 1.5e-12 1
UNIPROTKB|P0A7D1 - symbol:pth "peptidyl-tRNA hydrolase" s... 165 2.4e-12 1
TIGR_CMR|VC_2184 - symbol:VC_2184 "peptidyl-tRNA hydrolas... 163 3.9e-12 1
TIGR_CMR|NSE_0307 - symbol:NSE_0307 "peptidyl-tRNA hydrol... 160 8.2e-12 1
UNIPROTKB|E1BK88 - symbol:PTRH1 "Uncharacterized protein"... 158 1.3e-11 1
MGI|MGI:1913779 - symbol:Ptrh1 "peptidyl-tRNA hydrolase 1... 157 1.7e-11 1
UNIPROTKB|E2RR88 - symbol:PTRH1 "Uncharacterized protein"... 147 2.0e-10 1
SGD|S000001232 - symbol:PTH1 "One of two mitochondrially-... 147 2.0e-10 1
ZFIN|ZDB-GENE-050306-33 - symbol:ptrh1 "peptidyl-tRNA hyd... 127 7.2e-08 1
POMBASE|SPBC2D10.15c - symbol:pth1 "mitochondrial peptidy... 98 6.7e-05 1
>TAIR|locus:2183234 [details] [associations]
symbol:AT5G19830 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006412 "translation"
evidence=ISS] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 HSSP:P0A7D1 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 EMBL:AF296838 EMBL:BT011605 EMBL:BT012252
EMBL:AK227887 IPI:IPI00521866 RefSeq:NP_197484.4 UniGene:At.31249
ProteinModelPortal:Q6NLS8 SMR:Q6NLS8 STRING:Q6NLS8
EnsemblPlants:AT5G19830.1 GeneID:832103 KEGG:ath:AT5G19830
TAIR:At5g19830 InParanoid:Q6NLS8 OMA:FRKNREF PhylomeDB:Q6NLS8
ProtClustDB:CLSN2681642 Genevestigator:Q6NLS8 Uniprot:Q6NLS8
Length = 219
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 93/120 (77%), Positives = 104/120 (86%)
Query: 2 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK 60
+++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN+GFEMID FAES GI MN V+ K
Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFK 60
Query: 61 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
A GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL+
Sbjct: 61 AIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQ 120
>TAIR|locus:2014134 [details] [associations]
symbol:AT1G18440 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006783 "heme biosynthetic process"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0009570 EMBL:AC013354
GO:GO:0004045 PIR:C86318 HSSP:P0A7D1 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AK119054
EMBL:BT005284 IPI:IPI00539130 RefSeq:NP_173279.2 UniGene:At.22357
ProteinModelPortal:Q8GW64 SMR:Q8GW64 STRING:Q8GW64 PaxDb:Q8GW64
PRIDE:Q8GW64 EnsemblPlants:AT1G18440.1 GeneID:838424
KEGG:ath:AT1G18440 TAIR:At1g18440 InParanoid:Q8GW64 OMA:VINWVLK
PhylomeDB:Q8GW64 ProtClustDB:CLSN2918163 Genevestigator:Q8GW64
Uniprot:Q8GW64
Length = 288
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 68/102 (66%), Positives = 87/102 (85%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY+GTRHNVGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LAK
Sbjct: 94 PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 119
PQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRL 195
>TAIR|locus:2181412 [details] [associations]
symbol:AT5G16140 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0008380 GO:GO:0006397 GO:GO:0030529
GO:GO:0004045 EMBL:AL391148 EMBL:BT010650 EMBL:AK175292
IPI:IPI00533319 PIR:T51484 RefSeq:NP_001078593.1 RefSeq:NP_197118.1
UniGene:At.31709 HSSP:P0A7D1 ProteinModelPortal:Q9LF14 SMR:Q9LF14
STRING:Q9LF14 PRIDE:Q9LF14 EnsemblPlants:AT5G16140.1
EnsemblPlants:AT5G16140.2 GeneID:831471 KEGG:ath:AT5G16140
GeneFarm:2616 TAIR:At5g16140 eggNOG:COG0193 HOGENOM:HOG000004797
InParanoid:Q9LF14 KO:K01056 OMA:SEFINDF PhylomeDB:Q9LF14
ProtClustDB:CLSN2686133 Genevestigator:Q9LF14 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 Uniprot:Q9LF14
Length = 240
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 65/103 (63%), Positives = 80/103 (77%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG+KY GTRHNVGFEMID A +G+ MNT+ KA G G + D P+LLAK
Sbjct: 45 PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
PQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQ 147
>TAIR|locus:2173298 [details] [associations]
symbol:AT5G38290 species:3702 "Arabidopsis thaliana"
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0006783 "heme biosynthetic process" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 EMBL:CP002688
GO:GO:0004045 HOGENOM:HOG000004797 KO:K01056
ProtClustDB:CLSN2686133 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 EMBL:AB011481 IPI:IPI00516328
RefSeq:NP_974860.1 UniGene:At.30420 ProteinModelPortal:A8MQQ3
SMR:A8MQQ3 STRING:A8MQQ3 PRIDE:A8MQQ3 EnsemblPlants:AT5G38290.2
GeneID:833811 KEGG:ath:AT5G38290 OMA:FEMIDHI Genevestigator:A8MQQ3
Uniprot:A8MQQ3
Length = 250
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 68/103 (66%), Positives = 79/103 (76%)
Query: 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
PWL VGLGNPG KY GTRHN+GFEMID A + ISMNT+ KA G G VG+ P+LL K
Sbjct: 55 PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 114
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
PQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+
Sbjct: 115 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQ 157
>TIGR_CMR|BA_0050 [details] [associations]
symbol:BA_0050 "peptidyl-tRNA hydrolase" species:198094
"Bacillus anthracis str. Ames" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:NP_842619.1 RefSeq:YP_016653.1
RefSeq:YP_026337.1 ProteinModelPortal:Q81VY9 DNASU:1087397
EnsemblBacteria:EBBACT00000008195 EnsemblBacteria:EBBACT00000017228
EnsemblBacteria:EBBACT00000022310 GeneID:1087397 GeneID:2819040
GeneID:2853113 KEGG:ban:BA_0050 KEGG:bar:GBAA_0050 KEGG:bat:BAS0050
OMA:KPETFMN BioCyc:BANT260799:GJAJ-57-MONOMER
BioCyc:BANT261594:GJ7F-59-MONOMER Uniprot:Q81VY9
Length = 186
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 54/101 (53%), Positives = 66/101 (65%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y+ TRHN+GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR
Sbjct: 63 TYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLR 103
>TIGR_CMR|CHY_0196 [details] [associations]
symbol:CHY_0196 "peptidyl-tRNA hydrolase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001328 InterPro:IPR018171
Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 EMBL:AF244580 RefSeq:YP_359068.1
ProteinModelPortal:Q9F8Q3 STRING:Q9F8Q3 GeneID:3726668
KEGG:chy:CHY_0196 PATRIC:21273573 OMA:IKFKTGG
BioCyc:CHYD246194:GJCN-197-MONOMER Uniprot:Q9F8Q3
Length = 187
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 48/102 (47%), Positives = 68/102 (66%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 78
++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL KP
Sbjct: 2 FIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKP 61
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
QTYMNLSG + ++YKLPL+R++V +DD+ LP G +RLR
Sbjct: 62 QTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLR 103
>TIGR_CMR|DET_0595 [details] [associations]
symbol:DET_0595 "peptidyl-tRNA hydrolase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:YP_181337.1 ProteinModelPortal:Q3Z8W2
STRING:Q3Z8W2 GeneID:3230075 KEGG:det:DET0595 PATRIC:21608261
BioCyc:DETH243164:GJNF-596-MONOMER Uniprot:Q3Z8W2
Length = 189
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 47/101 (46%), Positives = 63/101 (62%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L +GLGNPG +Y G RHNVGF+ + FA+ IS + C + G G + D ++LAKPQ
Sbjct: 3 LIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKPQ 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
TYMNLSG++ L Y L ++V DD+ LP G +RLR
Sbjct: 63 TYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLR 103
>TIGR_CMR|GSU_0663 [details] [associations]
symbol:GSU_0663 "peptidyl-tRNA hydrolase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 RefSeq:NP_951720.1 ProteinModelPortal:Q74FE6
GeneID:2685517 KEGG:gsu:GSU0663 PATRIC:22024085
BioCyc:GSUL243231:GH27-682-MONOMER Uniprot:Q74FE6
Length = 193
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 46/101 (45%), Positives = 61/101 (60%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG KY TRHN GF ++D A + G S+ FG+G +LL KPQ
Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQ 64
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
TYMNLSG S ++KLPL +V HDD+ +P G ++++
Sbjct: 65 TYMNLSGRSVAEALRFHKLPLCDTIVIHDDLDIPFGRVKVK 105
>TIGR_CMR|SPO_0811 [details] [associations]
symbol:SPO_0811 "peptidyl-tRNA hydrolase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:KPETFMN RefSeq:YP_166064.1 ProteinModelPortal:Q5LV91
GeneID:3195572 KEGG:sil:SPO0811 PATRIC:23374899 Uniprot:Q5LV91
Length = 239
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 43/101 (42%), Positives = 59/101 (58%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
LFVGLGNPG KY RHN+GF +D AE G V + +G +G VLL KP+
Sbjct: 3 LFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLKPE 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
T+MN SG+S G +YKL + V HD++ L G ++++
Sbjct: 63 TFMNRSGQSVGEAMRFYKLDSTDITVLHDELDLAPGKVKVK 103
>UNIPROTKB|P65865 [details] [associations]
symbol:pth "Peptidyl-tRNA hydrolase" species:1773
"Mycobacterium tuberculosis" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005886 GO:GO:0005737 GO:GO:0040007
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 OMA:VINWVLK
ProtClustDB:PRK05426 PIR:A70622 RefSeq:NP_215530.1
RefSeq:NP_335479.1 RefSeq:YP_006514375.1 PDB:2JRC PDB:2Z2I PDB:2Z2J
PDB:2Z2K PDB:3TCK PDB:3TCN PDB:3TD2 PDB:3TD6 PDBsum:2JRC
PDBsum:2Z2I PDBsum:2Z2J PDBsum:2Z2K PDBsum:3TCK PDBsum:3TCN
PDBsum:3TD2 PDBsum:3TD6 ProteinModelPortal:P65865 SMR:P65865
PRIDE:P65865 EnsemblBacteria:EBMYCT00000001706
EnsemblBacteria:EBMYCT00000072150 GeneID:13319576 GeneID:886037
GeneID:925158 KEGG:mtc:MT1042 KEGG:mtu:Rv1014c KEGG:mtv:RVBD_1014c
PATRIC:18124034 TubercuList:Rv1014c EvolutionaryTrace:P65865
Uniprot:P65865
Length = 191
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 45/108 (41%), Positives = 59/108 (54%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAP 72
+A P L VGLGNPG Y TRHN+GF + D A G H + A G
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKA-HKRSGAEVATGRSAGRS 59
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLK 107
>TIGR_CMR|CPS_3559 [details] [associations]
symbol:CPS_3559 "peptidyl-tRNA hydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 HOGENOM:HOG000004796
ProtClustDB:PRK05426 OMA:IKFKTGG RefSeq:YP_270233.1
ProteinModelPortal:Q47Y87 SMR:Q47Y87 STRING:Q47Y87 GeneID:3518514
KEGG:cps:CPS_3559 PATRIC:21470049
BioCyc:CPSY167879:GI48-3587-MONOMER Uniprot:Q47Y87
Length = 194
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKP 78
L GLGNPG +Y TRHN G ++ A S IS+ +G+G + V L P
Sbjct: 5 LIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLIP 64
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
T+MN SG++ PLA +YK+ ++ +LV HD++ + GV +++
Sbjct: 65 TTFMNRSGQAVAPLANFYKISVDEILVAHDELDMLPGVCKIK 106
>TIGR_CMR|CBU_1841 [details] [associations]
symbol:CBU_1841 "peptidyl-tRNA hydrolase" species:227377
"Coxiella burnetii RSA 493" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:FSSKHNA RefSeq:NP_820820.1 ProteinModelPortal:Q83AP0
PRIDE:Q83AP0 GeneID:1209753 KEGG:cbu:CBU_1841 PATRIC:17932413
BioCyc:CBUR227377:GJ7S-1815-MONOMER Uniprot:Q83AP0
Length = 187
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 40/102 (39%), Positives = 58/102 (56%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA-PVLLAKP 78
L GLGNPGD+Y TRHNVG ++ A+ + S+ K GFV L KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSL----AKENKFHGFVAKCNDYWLLKP 62
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
T+MN SG++ LA +YK+ + +L+ HD++ P G +RL+
Sbjct: 63 TTFMNESGQAVAALAHFYKIKPSEILIAHDELDFPAGDIRLK 104
>TIGR_CMR|ECH_0141 [details] [associations]
symbol:ECH_0141 "peptidyl-tRNA hydrolase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506969.1 ProteinModelPortal:Q2GHW4
STRING:Q2GHW4 GeneID:3927185 KEGG:ech:ECH_0141 PATRIC:20575827
OMA:YVLKPPR BioCyc:ECHA205920:GJNR-141-MONOMER Uniprot:Q2GHW4
Length = 198
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 40/103 (38%), Positives = 61/103 (59%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFA-ESQGISMNTVHCKATFGQGFVGDAPVLLAK 77
+L GLGNPG KY+ +RHN GF ++DA A E S H A G + V+L K
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERH-NALISIGNIKSHRVILVK 61
Query: 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
P T+MN SG +A+ YK+PL+ +++FHD++ + +R++
Sbjct: 62 PWTFMNNSGAPIMSIASLYKIPLDNIIIFHDEVEINFCTIRVK 104
>TIGR_CMR|APH_1301 [details] [associations]
symbol:APH_1301 "peptidyl-tRNA hydrolase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
RefSeq:YP_505815.1 ProteinModelPortal:Q2GII6 STRING:Q2GII6
GeneID:3930906 KEGG:aph:APH_1301 PATRIC:20951398 OMA:GDESGFM
ProtClustDB:PRK05426 BioCyc:APHA212042:GHPM-1303-MONOMER
Uniprot:Q2GII6
Length = 183
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 42/101 (41%), Positives = 54/101 (53%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGNPG +Y TRHNVGF +IDA A A G +G V+L KP
Sbjct: 3 LLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMKPL 62
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
YMN SG S + +K+ + VFHDD+ L G +R++
Sbjct: 63 LYMNRSGTSVLSCTSMHKIAPEHITVFHDDVELQPGTIRVK 103
>TIGR_CMR|CJE_0357 [details] [associations]
symbol:CJE_0357 "peptidyl-tRNA hydrolase" species:195099
"Campylobacter jejuni RM1221" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_178376.1 ProteinModelPortal:Q5HWF9
STRING:Q5HWF9 GeneID:3231119 KEGG:cjr:CJE0357 PATRIC:20042418
OMA:FSSKHNA BioCyc:CJEJ195099:GJC0-362-MONOMER Uniprot:Q5HWF9
Length = 181
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
L VGLGN G +Y+ TRHNVGF +ID + + N + K G+ F + +LL KP
Sbjct: 3 LVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFT-NLTNSKFK-GELFKIGSSLLLLKPS 60
Query: 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
TYMN SG S + +YK R++V HDD+ + G LR +
Sbjct: 61 TYMNNSGLSVKAVNDFYKC--ERMIVIHDDIDINLGALRFK 99
>DICTYBASE|DDB_G0280507 [details] [associations]
symbol:DDB_G0280507 "Peptidyl-tRNA hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
dictyBase:DDB_G0280507 EMBL:AAFI02000036 GO:GO:0004045
eggNOG:COG0193 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 RefSeq:XP_641213.1 ProteinModelPortal:Q54V95
STRING:Q54V95 EnsemblProtists:DDB0205243 GeneID:8622594
KEGG:ddi:DDB_G0280507 InParanoid:Q54V95 Uniprot:Q54V95
Length = 452
Score = 104 (41.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 73 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
V+L KP TYMN SG + Y +PL +LV DD+ GV+++R
Sbjct: 322 VILLKPMTYMNASGNPLRTIQQKYNVPLQNILVLVDDISTDIGVIKMR 369
Score = 100 (40.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAE 48
V ++ VGLGNPG +Y TRHN+GF ID E
Sbjct: 162 VKNRYIIVGLGNPGTEYVNTRHNIGFSAIDHLCE 195
>TIGR_CMR|SO_1184 [details] [associations]
symbol:SO_1184 "peptidyl-tRNA hydrolase" species:211586
"Shewanella oneidensis MR-1" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 HOGENOM:HOG000004796 ProtClustDB:PRK05426
OMA:IKFKTGG RefSeq:NP_716809.1 ProteinModelPortal:Q8EHN5 SMR:Q8EHN5
GeneID:1169013 KEGG:son:SO_1184 PATRIC:23522008 Uniprot:Q8EHN5
Length = 195
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 39/104 (37%), Positives = 58/104 (55%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG---QGFVGDAPVLLA 76
L VGL NPG +Y TRHN G ++ A G+S+ V FG + + V L
Sbjct: 6 LIVGLANPGAEYVQTRHNAGAWYVEELARICGVSL--VADSKYFGLTARAVLHGKDVRLL 63
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
P TYMNLSG++ G LA ++++ +LV HD++ +P GV + +
Sbjct: 64 IPTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFK 107
>UNIPROTKB|C9J7Z1 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] InterPro:IPR001328 Pfam:PF01195
GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
HGNC:HGNC:27039 OrthoDB:EOG4X3H2J EMBL:AL162426 IPI:IPI00945330
ProteinModelPortal:C9J7Z1 SMR:C9J7Z1 STRING:C9J7Z1
Ensembl:ENST00000423807 UCSC:uc010mxm.3 ArrayExpress:C9J7Z1
Bgee:C9J7Z1 Uniprot:C9J7Z1
Length = 182
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV- 57
++R + R C RP W+ GLGNPG GTRH+VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTR 68
Query: 58 --HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 115
HC A +GDA ++L +P+ MN +G S A + L V + HD++ P G
Sbjct: 69 DRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLG 128
Query: 116 VLRLR 120
L L+
Sbjct: 129 RLALK 133
>UNIPROTKB|Q86Y79 [details] [associations]
symbol:PTRH1 "Probable peptidyl-tRNA hydrolase"
species:9606 "Homo sapiens" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 GO:GO:0005739 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:KPETFMN EMBL:BC047012
IPI:IPI00048572 RefSeq:NP_001002913.1 UniGene:Hs.653265
ProteinModelPortal:Q86Y79 SMR:Q86Y79 IntAct:Q86Y79 STRING:Q86Y79
PhosphoSite:Q86Y79 DMDM:74750555 PaxDb:Q86Y79 PRIDE:Q86Y79
DNASU:138428 Ensembl:ENST00000419060 Ensembl:ENST00000543175
GeneID:138428 KEGG:hsa:138428 UCSC:uc004bro.3 CTD:138428
GeneCards:GC09M130475 HGNC:HGNC:27039 HPA:HPA021223
neXtProt:NX_Q86Y79 PharmGKB:PA134917129 HOVERGEN:HBG067636
InParanoid:Q86Y79 OrthoDB:EOG4X3H2J PhylomeDB:Q86Y79
GenomeRNAi:138428 NextBio:83788 ArrayExpress:Q86Y79 Bgee:Q86Y79
CleanEx:HS_PTRH1 Genevestigator:Q86Y79 GermOnline:ENSG00000187024
Uniprot:Q86Y79
Length = 214
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV- 57
++R + R C RP W+ GLGNPG GTRH+VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTR 68
Query: 58 --HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 115
HC A +GDA ++L +P+ MN +G S A + L V + HD++ P G
Sbjct: 69 DRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLG 128
Query: 116 VLRLR 120
L L+
Sbjct: 129 RLALK 133
>UNIPROTKB|F1RS13 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:FSSKHNA GeneTree:ENSGT00390000004247
EMBL:CU407281 Ensembl:ENSSSCT00000006175 Uniprot:F1RS13
Length = 213
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/125 (33%), Positives = 61/125 (48%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN--- 55
++R + R C RP WL GLGNPG GTRH+VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWLVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWAR 68
Query: 56 TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 115
C A +GDA V+L +P+ MN +G S A + L V + HD++ P G
Sbjct: 69 DARCAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLG 128
Query: 116 VLRLR 120
L L+
Sbjct: 129 KLALK 133
>UNIPROTKB|F1RS14 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01196 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 GeneTree:ENSGT00390000004247 EMBL:CU407281
Ensembl:ENSSSCT00000006174 Uniprot:F1RS14
Length = 204
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/125 (33%), Positives = 61/125 (48%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN--- 55
++R + R C RP WL GLGNPG GTRH+VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPPGKRWLVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWAR 68
Query: 56 TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 115
C A +GDA V+L +P+ MN +G S A + L V + HD++ P G
Sbjct: 69 DARCAADLALASLGDAQVVLLRPRRLMNNNGRSVARAAELFGLTAEEVYLVHDELDKPLG 128
Query: 116 VLRLR 120
L L+
Sbjct: 129 KLALK 133
>RGD|1310165 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001328 Pfam:PF01195 RGD:1310165
RGD:1359111 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 IPI:IPI00780687 Ensembl:ENSRNOT00000060258
ArrayExpress:F1M8A9 Uniprot:F1M8A9
Length = 208
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLL 75
WL GLGNPG GTRH+VG ++ A+ G++ N C A GDA ++L
Sbjct: 34 WLVAGLGNPG--MPGTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 91
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
+P+ MN++G S A + L + + HD++ P G L L+
Sbjct: 92 LRPRRLMNVNGRSVAKAAELFGLSAEEIYLVHDELDKPLGKLALK 136
>UNIPROTKB|P0A7D1 [details] [associations]
symbol:pth "peptidyl-tRNA hydrolase" species:83333
"Escherichia coli K-12" [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA;IMP]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
HAMAP:MF_00083 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006515
GO:GO:0004045 eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
HOGENOM:HOG000004796 EMBL:X61941 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:S16753 RefSeq:NP_415722.1 RefSeq:YP_489471.1 PDB:2PTH PDB:3VJR
PDBsum:2PTH PDBsum:3VJR ProteinModelPortal:P0A7D1 SMR:P0A7D1
DIP:DIP-35932N IntAct:P0A7D1 MINT:MINT-1225563 PRIDE:P0A7D1
EnsemblBacteria:EBESCT00000000501 EnsemblBacteria:EBESCT00000017627
GeneID:12933876 GeneID:945765 KEGG:ecj:Y75_p1176 KEGG:eco:b1204
PATRIC:32117660 EchoBASE:EB0778 EcoGene:EG10785
BioCyc:EcoCyc:EG10785-MONOMER BioCyc:ECOL316407:JW1195-MONOMER
BioCyc:MetaCyc:EG10785-MONOMER SABIO-RK:P0A7D1
EvolutionaryTrace:P0A7D1 Genevestigator:P0A7D1 Uniprot:P0A7D1
Length = 194
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 38/104 (36%), Positives = 58/104 (55%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFG---QGFVGDAPVLLA 76
L VGL NPG +Y TRHN G +D AE + K FG + +G V L
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLRE-EAKF-FGYTSRVTLGGEDVRLL 62
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
P T+MNLSG++ +A+++++ + +LV HD++ LP GV + +
Sbjct: 63 VPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFK 106
>TIGR_CMR|VC_2184 [details] [associations]
symbol:VC_2184 "peptidyl-tRNA hydrolase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004045
eggNOG:COG0193 KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 TIGRFAMs:TIGR00447 ProtClustDB:PRK05426 OMA:IKFKTGG
PIR:C82107 RefSeq:NP_231815.1 ProteinModelPortal:Q9KQ21 SMR:Q9KQ21
DNASU:2613320 GeneID:2613320 KEGG:vch:VC2184 PATRIC:20083381
Uniprot:Q9KQ21
Length = 196
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 78
L VGL NPG +Y TRHN G +++ A +++ N G+ + + + P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 79 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
T+MNLSG++ LA +Y++ ++V HD++ LP GV + +
Sbjct: 67 TTFMNLSGKAIAALANFYQIKPEEIMVAHDELDLPPGVAKFK 108
>TIGR_CMR|NSE_0307 [details] [associations]
symbol:NSE_0307 "peptidyl-tRNA hydrolase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195
PROSITE:PS01195 PROSITE:PS01196 HAMAP:MF_00083 GO:GO:0005737
GO:GO:0004045 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 TIGRFAMs:TIGR00447
ProtClustDB:PRK05426 RefSeq:YP_506197.1 ProteinModelPortal:Q2GE99
STRING:Q2GE99 GeneID:3931915 KEGG:nse:NSE_0307 PATRIC:22680705
OMA:LADIPIM BioCyc:NSEN222891:GHFU-333-MONOMER Uniprot:Q2GE99
Length = 194
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 76
R ++ GLGNPG +Y TRHN+GF +ID + G V + L
Sbjct: 5 RTFVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLYLF 64
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
KP +MN SG L +YK+ L V+VFHDD+ L ++++
Sbjct: 65 KPVAFMNNSGRPLVQLVNFYKVELENVIVFHDDIDLDFAKVKIK 108
>UNIPROTKB|E1BK88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:DAAA02032156 IPI:IPI00689946 Ensembl:ENSBTAT00000016930
Uniprot:E1BK88
Length = 216
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 3 INRFLRRGFCTAVARP----WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH 58
++R + R C RP WL GLGNPG GTRH+VG ++ A G++ +
Sbjct: 13 LSRAMSR--CVLEPRPAGKRWLVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWER 68
Query: 59 ---CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY--YKLPLNRVLVFHDDMGLP 113
C A Q +GDA ++L +P+ MNL+G S + L V + HD++ P
Sbjct: 69 DRRCAADLAQASLGDAQLVLLRPRRLMNLNGHSVAQAGQVELFGLTAEEVYLVHDELDKP 128
Query: 114 CGVLRLR 120
G + L+
Sbjct: 129 LGKVALK 135
>MGI|MGI:1913779 [details] [associations]
symbol:Ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 MGI:MGI:1913779 GO:GO:0005739 GO:GO:0004045
eggNOG:COG0193 HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 OMA:FSSKHNA CTD:138428
HOVERGEN:HBG067636 OrthoDB:EOG4X3H2J EMBL:AK075833 EMBL:BC098218
IPI:IPI00225955 RefSeq:NP_848710.1 UniGene:Mm.268037
ProteinModelPortal:Q8BW00 SMR:Q8BW00 STRING:Q8BW00
PhosphoSite:Q8BW00 PaxDb:Q8BW00 PRIDE:Q8BW00
Ensembl:ENSMUST00000066352 GeneID:329384 KEGG:mmu:329384
GeneTree:ENSGT00390000004247 ChiTaRS:PTRH1 NextBio:398724
Bgee:Q8BW00 CleanEx:MM_PTRH1 Genevestigator:Q8BW00
GermOnline:ENSMUSG00000053746 Uniprot:Q8BW00
Length = 204
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLL 75
WL GLGN G GTRH+VG ++ A G++ N C A +GDA ++L
Sbjct: 21 WLVAGLGNHG--MPGTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
+P+ MN++G S A + L + + HD++ P G L L+
Sbjct: 79 LRPRRLMNVNGRSVARAAELFGLTAEEIYLVHDELDKPLGKLALK 123
>UNIPROTKB|E2RR88 [details] [associations]
symbol:PTRH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
GO:GO:0005739 GO:GO:0004045 Gene3D:3.40.50.1470 PANTHER:PTHR17224
SUPFAM:SSF53178 OMA:IKFKTGG GeneTree:ENSGT00390000004247
EMBL:AAEX03006864 Ensembl:ENSCAFT00000032028 Uniprot:E2RR88
Length = 215
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 34/105 (32%), Positives = 50/105 (47%)
Query: 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLL 75
WL GLGNPG TRH+VG ++ A G++ C A + DA ++L
Sbjct: 31 WLVAGLGNPG--LPSTRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 76 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
+P+ MN +G S A + L V + HD++ P G L L+
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGKLALK 133
>SGD|S000001232 [details] [associations]
symbol:PTH1 "One of two mitochondrially-localized
peptidyl-tRNA hydrolases" species:4932 "Saccharomyces cerevisiae"
[GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA;IGI;IDA] [GO:0032543 "mitochondrial translation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] InterPro:IPR001328
InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195 PROSITE:PS01196
SGD:S000001232 GO:GO:0005739 EMBL:BK006934 GO:GO:0032543
EMBL:U00030 GO:GO:0004045 eggNOG:COG0193 HOGENOM:HOG000004797
KO:K01056 Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178
TIGRFAMs:TIGR00447 KO:K11270 RefSeq:NP_012061.3 GeneID:856598
KEGG:sce:YHR191C RefSeq:NP_012059.3 GeneID:856596 KEGG:sce:YHR189W
GeneTree:ENSGT00390000004247 OrthoDB:EOG4GXJXH PIR:S46683
ProteinModelPortal:P38876 SMR:P38876 DIP:DIP-5239N MINT:MINT-556852
STRING:P38876 PRIDE:P38876 EnsemblFungi:YHR189W CYGD:YHR189w
OMA:KYTLLQS NextBio:982484 Genevestigator:P38876 GermOnline:YHR189W
Uniprot:P38876
Length = 190
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/107 (35%), Positives = 55/107 (51%)
Query: 19 WLFV--GLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVH-CKATFGQ-GFVGDAP-V 73
W V G+GNP +Y GTRHNVG M++ + G+ T T G+ ++ D
Sbjct: 5 WRLVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTGGKVHYIEDEHCT 64
Query: 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 120
+L YMNLSGE + A Y R +V HD++ + CG ++LR
Sbjct: 65 ILRSDGQYMNLSGEQVCKVWARYAKYQARHVVIHDELSVACGKVQLR 111
>ZFIN|ZDB-GENE-050306-33 [details] [associations]
symbol:ptrh1 "peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01196
ZFIN:ZDB-GENE-050306-33 GO:GO:0004045 eggNOG:COG0193
HOGENOM:HOG000004797 KO:K01056 Gene3D:3.40.50.1470
PANTHER:PTHR17224 SUPFAM:SSF53178 HOVERGEN:HBG067636
OrthoDB:EOG4X3H2J GeneTree:ENSGT00390000004247 EMBL:BX001023
IPI:IPI00481323 RefSeq:NP_001119866.1 UniGene:Dr.88889
Ensembl:ENSDART00000142927 KEGG:dre:559192 InParanoid:A2BDR2
OMA:GKGLIGD NextBio:20882835 Uniprot:A2BDR2
Length = 266
Score = 127 (49.8 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 31/99 (31%), Positives = 50/99 (50%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVG---DAPVLLA 76
+ VGLGNPG G+RH+VG ++ AE G + G+ V D ++L
Sbjct: 58 MVVGLGNPG--MTGSRHSVGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVLL 115
Query: 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 115
+P+ MN++G S A+ Y + +L+ HD++ P G
Sbjct: 116 RPKLLMNVNGVSVAKAASRYLIQPEHILLIHDELDKPLG 154
>POMBASE|SPBC2D10.15c [details] [associations]
symbol:pth1 "mitochondrial peptidyl-tRNA hydrolase Pth1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=ISO] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001328 InterPro:IPR018171 Pfam:PF01195 PROSITE:PS01195
PROSITE:PS01196 PomBase:SPBC2D10.15c GO:GO:0005739 EMBL:CU329671
GO:GO:0032543 GO:GO:0004045 eggNOG:COG0193 KO:K01056
Gene3D:3.40.50.1470 PANTHER:PTHR17224 SUPFAM:SSF53178 PIR:T40118
RefSeq:NP_596234.2 STRING:O74806 EnsemblFungi:SPBC2D10.15c.1
GeneID:2540340 KEGG:spo:SPBC2D10.15c OMA:SHCETES OrthoDB:EOG4GXJXH
NextBio:20801468 Uniprot:O74806
Length = 206
Score = 98 (39.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 20 LFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 79
+ GLGNPG + +RH++G M+ +A+S N K + L
Sbjct: 32 IIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKEN----------LTLVLST 81
Query: 80 TYMNLSGESTGPLAAYY--KL-PLNRVL--VFHDDMGLPCGVLRLR 120
+YMN SG+ ++ + K+ PL++++ V HD++ L G ++LR
Sbjct: 82 SYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLR 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.143 0.461 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 131 121 0.00091 102 3 11 22 0.44 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 577 (61 KB)
Total size of DFA: 127 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.87u 0.14s 12.01t Elapsed: 00:00:01
Total cpu time: 11.87u 0.14s 12.01t Elapsed: 00:00:01
Start: Fri May 10 07:31:46 2013 End: Fri May 10 07:31:47 2013