Query 032899
Match_columns 131
No_of_seqs 131 out of 1030
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pth_A Peptidyl-tRNA hydrolase 100.0 2.8E-54 9.6E-59 335.3 12.0 114 18-131 2-116 (193)
2 1ryb_A CRS2; alpha-beta, hydro 100.0 6.5E-54 2.2E-58 335.9 12.4 117 15-131 14-130 (205)
3 2z2i_A PTH, peptidyl-tRNA hydr 100.0 3.5E-54 1.2E-58 334.4 10.7 115 17-131 3-118 (191)
4 3nea_A PTH, peptidyl-tRNA hydr 100.0 1.3E-53 4.6E-58 334.6 11.9 116 16-131 21-137 (207)
5 4hoy_A PTH, peptidyl-tRNA hydr 100.0 1E-52 3.5E-57 326.6 12.4 115 17-131 3-118 (193)
6 4fyj_A PTH, peptidyl-tRNA hydr 100.0 9.7E-53 3.3E-57 328.1 11.6 114 18-131 10-124 (199)
7 3v2i_A PTH, peptidyl-tRNA hydr 100.0 1.7E-52 5.7E-57 331.3 11.4 115 17-131 22-137 (222)
8 4fno_A PTH, peptidyl-tRNA hydr 100.0 3.7E-54 1.3E-58 335.0 0.0 114 18-131 4-118 (194)
9 1cfz_A Hydrogenase 2 maturatio 77.1 2.9 0.0001 30.2 4.2 30 18-51 2-31 (162)
10 3pu6_A Uncharacterized protein 73.2 4.4 0.00015 29.3 4.3 30 17-50 3-32 (157)
11 2e85_A Hydrogenase 3 maturatio 71.8 4.1 0.00014 29.4 3.9 29 17-49 4-32 (159)
12 3utn_X Thiosulfate sulfurtrans 53.6 12 0.0004 30.1 3.7 36 78-113 90-125 (327)
13 1c8b_A Spore protease; novel f 45.7 16 0.00055 30.5 3.4 93 15-123 111-214 (371)
14 3ddh_A Putative haloacid dehal 42.4 12 0.00042 25.7 2.0 29 85-113 159-189 (234)
15 3fzq_A Putative hydrolase; YP_ 39.4 19 0.00066 26.1 2.7 26 85-110 201-226 (274)
16 3r4c_A Hydrolase, haloacid deh 37.6 20 0.00069 26.1 2.6 25 86-110 196-220 (268)
17 3mpo_A Predicted hydrolase of 36.3 20 0.00069 26.3 2.4 26 85-110 198-223 (279)
18 3dnp_A Stress response protein 35.6 22 0.00077 26.2 2.6 26 85-110 203-228 (290)
19 2pq0_A Hypothetical conserved 35.4 19 0.00066 26.2 2.2 25 86-110 185-209 (258)
20 4dw8_A Haloacid dehalogenase-l 35.4 21 0.00072 26.1 2.4 25 86-110 199-223 (279)
21 2l32_A Small archaeal modifier 34.2 26 0.0009 22.0 2.4 31 86-116 20-50 (74)
22 3dao_A Putative phosphatse; st 34.1 24 0.00083 26.3 2.6 26 85-110 212-237 (283)
23 3b64_A Macrophage migration in 34.0 30 0.001 22.7 2.8 23 92-115 84-106 (112)
24 3l7y_A Putative uncharacterize 34.0 24 0.00083 26.6 2.6 25 86-110 230-254 (304)
25 3pgv_A Haloacid dehalogenase-l 33.6 25 0.00085 26.1 2.6 26 85-110 210-235 (285)
26 2x4d_A HLHPP, phospholysine ph 30.7 36 0.0012 24.1 2.9 29 85-113 192-222 (271)
27 3qnm_A Haloacid dehalogenase-l 28.0 45 0.0015 22.9 3.0 26 85-110 164-189 (240)
28 2c4n_A Protein NAGD; nucleotid 27.8 40 0.0014 23.3 2.7 26 85-110 178-203 (250)
29 3fwt_A Macrophage migration in 27.4 35 0.0012 23.5 2.3 24 91-115 104-127 (133)
30 1l7m_A Phosphoserine phosphata 26.7 43 0.0015 22.6 2.6 25 86-110 145-169 (211)
31 3vay_A HAD-superfamily hydrola 26.4 46 0.0016 22.9 2.8 26 85-110 157-182 (230)
32 3mtn_B UBA80, ubcep1, ubiquiti 25.6 69 0.0024 19.2 3.3 39 92-130 33-85 (85)
33 2rbk_A Putative uncharacterize 24.7 42 0.0014 24.5 2.4 26 85-110 188-213 (261)
34 1rlm_A Phosphatase; HAD family 23.8 44 0.0015 24.6 2.4 26 85-110 192-217 (271)
35 3mc1_A Predicted phosphatase, 23.7 46 0.0016 22.8 2.4 26 85-110 144-169 (226)
36 3s6j_A Hydrolase, haloacid deh 23.7 58 0.002 22.3 2.9 26 85-110 149-174 (233)
37 1nrw_A Hypothetical protein, h 23.5 48 0.0016 24.6 2.6 26 85-110 217-242 (288)
38 1te2_A Putative phosphatase; s 23.5 51 0.0017 22.3 2.6 25 86-110 153-177 (226)
39 1rkq_A Hypothetical protein YI 23.0 46 0.0016 24.8 2.4 26 85-110 199-224 (282)
40 3ed5_A YFNB; APC60080, bacillu 22.8 62 0.0021 22.2 2.9 26 85-110 160-186 (238)
41 1s2o_A SPP, sucrose-phosphatas 22.6 52 0.0018 24.0 2.6 26 85-110 163-188 (244)
42 3umg_A Haloacid dehalogenase; 22.5 62 0.0021 22.4 2.9 25 86-110 172-196 (254)
43 2pib_A Phosphorylated carbohyd 22.5 57 0.002 21.8 2.6 26 85-110 142-167 (216)
44 3e58_A Putative beta-phosphogl 22.4 58 0.002 21.7 2.6 26 85-110 147-172 (214)
45 2b30_A Pvivax hypothetical pro 22.3 52 0.0018 25.0 2.6 26 85-110 225-250 (301)
46 2fdr_A Conserved hypothetical 22.2 55 0.0019 22.4 2.5 26 85-110 145-170 (229)
47 2hdo_A Phosphoglycolate phosph 21.7 65 0.0022 21.9 2.8 24 86-109 141-164 (209)
48 3umc_A Haloacid dehalogenase; 21.6 58 0.002 22.8 2.6 25 85-109 175-199 (254)
49 2om6_A Probable phosphoserine 21.6 75 0.0026 21.7 3.1 25 86-110 161-185 (235)
50 4ex6_A ALNB; modified rossman 21.5 57 0.002 22.6 2.5 26 85-110 162-187 (237)
51 3ewi_A N-acylneuraminate cytid 21.2 55 0.0019 23.1 2.4 26 85-110 84-109 (168)
52 3m20_A 4-oxalocrotonate tautom 21.1 75 0.0026 18.5 2.7 20 92-111 26-45 (62)
53 3gyg_A NTD biosynthesis operon 21.0 59 0.002 23.9 2.6 26 85-110 212-237 (289)
54 3m9l_A Hydrolase, haloacid deh 21.0 65 0.0022 22.0 2.7 26 85-110 129-154 (205)
55 2ho4_A Haloacid dehalogenase-l 20.8 64 0.0022 22.8 2.7 29 85-113 181-211 (259)
56 3qxg_A Inorganic pyrophosphata 20.4 70 0.0024 22.4 2.8 25 86-110 169-193 (243)
57 3nas_A Beta-PGM, beta-phosphog 20.4 58 0.002 22.5 2.4 25 86-110 149-173 (233)
58 1vjr_A 4-nitrophenylphosphatas 20.3 65 0.0022 23.2 2.7 26 85-110 197-222 (271)
59 3u26_A PF00702 domain protein; 20.3 71 0.0024 21.9 2.8 25 86-110 158-182 (234)
60 1wr8_A Phosphoglycolate phosph 20.3 57 0.002 23.4 2.3 26 85-110 154-179 (231)
61 1wfy_A Regulator of G-protein 20.2 29 0.001 23.9 0.7 32 74-108 32-63 (104)
62 2wf7_A Beta-PGM, beta-phosphog 20.1 71 0.0024 21.6 2.7 25 86-110 148-172 (221)
No 1
>2pth_A Peptidyl-tRNA hydrolase; 1.20A {Escherichia coli} SCOP: c.56.3.1 PDB: 3ofv_A
Probab=100.00 E-value=2.8e-54 Score=335.33 Aligned_cols=114 Identities=38% Similarity=0.668 Sum_probs=109.5
Q ss_pred CeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCC-cceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHHc
Q 032899 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYY 96 (131)
Q Consensus 18 ~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~-~~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~~ 96 (131)
|+|||||||||++|++|||||||+++|+||++++++++ +.++++.++++.+.+++|+|+||+||||+||++|+++++||
T Consensus 2 m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~L~KP~TyMNlSG~sV~~~~~~y 81 (193)
T 2pth_A 2 IKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFF 81 (193)
T ss_dssp CCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHHH
T ss_pred cEEEEEECCCCcccccCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEcCCchHhcCcHHHHHHHHHh
Confidence 67999999999999999999999999999999999886 45688999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 97 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 97 ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
+++++++||||||||||+|++|+|.+||++||||+
T Consensus 82 ki~~~~ilVihDdldlp~G~irlk~gGs~gGHNGl 116 (193)
T 2pth_A 82 RINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGL 116 (193)
T ss_dssp TCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHH
T ss_pred CCCHHHEEEEecccCCCCceEEEecCCCCCCCCCH
Confidence 99999999999999999999999999999999995
No 2
>1ryb_A CRS2; alpha-beta, hydrolase; 1.70A {Zea mays} SCOP: c.56.3.1 PDB: 1rym_A 1ryn_A
Probab=100.00 E-value=6.5e-54 Score=335.92 Aligned_cols=117 Identities=60% Similarity=1.110 Sum_probs=112.0
Q ss_pred CCCCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCcceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHH
Q 032899 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAA 94 (131)
Q Consensus 15 ~~~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~ 94 (131)
+..++|||||||||++|++|||||||+++|+||+++++++++.++++.++++.+.+++|+|+||+||||+||++|+++++
T Consensus 14 ~~~~~LIVGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~sV~~~~~ 93 (205)
T 1ryb_A 14 EYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAA 93 (205)
T ss_dssp -CCCEEEEECCCCSGGGTTBGGGHHHHHHHHHHHHTTCCCCEEETTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHH
T ss_pred CCCCEEEEEECCCChhhccCchHHHHHHHHHHHHHcCCCcccccccEEEEEEEECCEEEEEEcCCchhhccCHHHHHHHH
Confidence 45689999999999999999999999999999999999987777889999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 95 YYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 95 ~~ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
||+++++++||||||||||+|++|+|.+||++||||+
T Consensus 94 ~yki~~~~ilVihDdLdLp~G~iRlk~gGs~gGHNGL 130 (205)
T 1ryb_A 94 YYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGL 130 (205)
T ss_dssp HTTCCGGGEEEEEEETTSCTTCEEEESSCCCTTCHHH
T ss_pred HhCCCHHHEEEEeecccCCCCeEEEeeCCCCCCCCCH
Confidence 9999999999999999999999999999999999995
No 3
>2z2i_A PTH, peptidyl-tRNA hydrolase; protein synthesis; 1.98A {Mycobacterium tuberculosis} PDB: 2z2j_A 2z2k_A 3tck_A 3tcn_A 3td2_A 3td6_A 2jrc_A 3p2j_A 3kk0_A 3kjz_A
Probab=100.00 E-value=3.5e-54 Score=334.37 Aligned_cols=115 Identities=43% Similarity=0.793 Sum_probs=109.8
Q ss_pred CCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCc-ceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHH
Q 032899 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY 95 (131)
Q Consensus 17 ~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~-~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~ 95 (131)
.|+|||||||||++|++|||||||+++|+||+++++++++ .++++.++++.+.+++++|+||+||||+||++|+++++|
T Consensus 3 ~m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~L~KP~TyMNlSG~aV~~~~~~ 82 (191)
T 2z2i_A 3 EPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKF 82 (191)
T ss_dssp SCEEEEECCCCSHHHHTBGGGHHHHHHHHHHHHTTCCCEECTTTSSEEEEEEETTEEEEEEECSSCGGGTHHHHHHHHHH
T ss_pred ccEEEEEECCCCchhccCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEcCCchhhcccHHHHHHHHH
Confidence 4789999999999999999999999999999999998764 357889999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 96 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 96 ~ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
|+++++++||||||||||+|++|+|++||++||||+
T Consensus 83 yki~~~~ilVihDdldlp~G~irlk~gGs~gGHNGl 118 (191)
T 2z2i_A 83 YSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGL 118 (191)
T ss_dssp TTCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHH
T ss_pred hCCCHHHEEEEecccCCCCceEEEecCCCCCCcCCH
Confidence 999999999999999999999999999999999995
No 4
>3nea_A PTH, peptidyl-tRNA hydrolase; 2.25A {Francisella tularensis subsp}
Probab=100.00 E-value=1.3e-53 Score=334.56 Aligned_cols=116 Identities=36% Similarity=0.643 Sum_probs=111.0
Q ss_pred CCCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCcc-eeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHH
Q 032899 16 ARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAA 94 (131)
Q Consensus 16 ~~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~~-~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~ 94 (131)
..++|||||||||++|++|||||||+++|+||+++++++.+. ++++.++++.+.+++++|+||+||||+||++|+++++
T Consensus 21 ~~~~LIVGLGNPG~~Y~~TRHNvGf~vvD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~ 100 (207)
T 3nea_A 21 PKIKMIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFPTTYMNNSGLAVSKVAN 100 (207)
T ss_dssp CCCCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEESSCGGGHHHHHHHHHH
T ss_pred CCcEEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCccccccccEEEEEEEECCeEEEEEeCCcchhCCcHHHHHHHH
Confidence 458999999999999999999999999999999999988755 6788999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 95 YYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 95 ~~ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
||+++++++||||||||||+|++|+|++||++||||+
T Consensus 101 ~yki~~e~ilVihDdLDLp~G~iRlk~gGs~gGHNGL 137 (207)
T 3nea_A 101 FYKIAPAEILVVHDELDIDSGEIRLKKGGGHGGHNGL 137 (207)
T ss_dssp HHTCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHH
T ss_pred HhCCCHHHEEEEEEcCCCCCceEEEecCCCCCCCCCH
Confidence 9999999999999999999999999999999999995
No 5
>4hoy_A PTH, peptidyl-tRNA hydrolase; enzyme, molecular conformation, INH hydrolase; 1.78A {Acinetobacter baumannii} PDB: 4fot_A 4fop_A
Probab=100.00 E-value=1e-52 Score=326.55 Aligned_cols=115 Identities=41% Similarity=0.765 Sum_probs=109.6
Q ss_pred CCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCc-ceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHH
Q 032899 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY 95 (131)
Q Consensus 17 ~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~-~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~ 95 (131)
..+|||||||||++|++|||||||+++|+||++++++++. .++.+.++++.+.+++++|+||+||||+||++|++++++
T Consensus 3 ~ikLIVGLGNPG~~Y~~TRHNiGf~~ld~La~~~~~~~~~~~k~~~~~~~~~~~~~~v~l~kP~TyMN~SG~aV~~~~~~ 82 (193)
T 4hoy_A 3 NISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKF 82 (193)
T ss_dssp CCCEEEECCCCSTTTTTBGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHH
T ss_pred CceEEEEcCCCchhhCcCcccHHHHHHHHHHHHcCCCccccccccEEEEEEEECCEEEEEEeCCCccccchhhHHHHHHH
Confidence 4679999999999999999999999999999999998854 467789999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 96 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 96 ~ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
|+++++++||||||||||+|++|+|++||++||||+
T Consensus 83 ~ki~~~~ilVihDdldL~~G~irlk~~G~~gGHNGl 118 (193)
T 4hoy_A 83 YQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGL 118 (193)
T ss_dssp TTCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHH
T ss_pred cCCCchheEEeeeccccccCceeeccCCCCCCcCCc
Confidence 999999999999999999999999999999999995
No 6
>4fyj_A PTH, peptidyl-tRNA hydrolase; 1.77A {Pseudomonas aeruginosa} PDB: 4fno_A 4djj_A* 4erx_A 4dhw_A
Probab=100.00 E-value=9.7e-53 Score=328.06 Aligned_cols=114 Identities=41% Similarity=0.711 Sum_probs=108.4
Q ss_pred CeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCc-ceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHHc
Q 032899 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYY 96 (131)
Q Consensus 18 ~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~-~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~~ 96 (131)
.-|||||||||++|++|||||||+++|+||+++++++.+ .++++.++++.+.+++++|+||+||||+||++|+++++||
T Consensus 10 ~~lIvGLGNPG~~Y~~TRHNvGf~vlD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~~y 89 (199)
T 4fyj_A 10 VQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFF 89 (199)
T ss_dssp CCEEEECCCCSGGGTTCGGGHHHHHHHHHHHHTTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHHHT
T ss_pred eeEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCcccccccceEEEEEEECCeEEEEEeCCcchhCChHHHHHHHHHh
Confidence 348999999999999999999999999999999998764 4677899999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 97 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 97 ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
+++++++||||||||||+|++|+|++||++||||+
T Consensus 90 ki~~~~ilVihDdldLp~G~irlk~gGs~gGHNGL 124 (199)
T 4fyj_A 90 RIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGL 124 (199)
T ss_dssp TCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHH
T ss_pred CCCHHHEEEEEecCCCCCceEEEecCCCCCCCCCH
Confidence 99999999999999999999999999999999995
No 7
>3v2i_A PTH, peptidyl-tRNA hydrolase; ssgcid, seattle structural genomics center for infectious DI RNA; HET: CIT; 1.65A {Burkholderia thailandensis E264}
Probab=100.00 E-value=1.7e-52 Score=331.26 Aligned_cols=115 Identities=42% Similarity=0.723 Sum_probs=109.5
Q ss_pred CCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCcc-eeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHH
Q 032899 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY 95 (131)
Q Consensus 17 ~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~~-~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~ 95 (131)
.++|||||||||++|++|||||||+++|+||+++++++.+. ++++.++++.+.+++|+|+||+||||+||++|+++++|
T Consensus 22 ~~~LIVGLGNPG~~Y~~TRHNiGf~vvD~La~~~~~~~~~~~kf~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~~ 101 (222)
T 3v2i_A 22 MIKLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEPQTYMNRSGQSVVALAHF 101 (222)
T ss_dssp CCCEEEECCCCSGGGTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHHH
T ss_pred eEEEEEEeCCCchhhCcCchHHHHHHHHHHHHHcCCCcccccccceEEEEEEECCeEEEEEeCCcchhcccHHHHHHHHH
Confidence 35899999999999999999999999999999999987653 57789999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 96 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 96 ~ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
|+++++++||||||||||+|++|+|++||++||||+
T Consensus 102 yki~~e~ilVihDdLDLp~G~iRlk~gGs~gGHNGL 137 (222)
T 3v2i_A 102 FKILPNEILVAHDELDLPPGAVKLKLGGGSGGHNGL 137 (222)
T ss_dssp HTCCGGGEEEEEEETTSCTTCEEEEECCCCTTCHHH
T ss_pred hCCCHHHEEEEEecCCCCCceEEEeCCCCCCCCCCH
Confidence 999999999999999999999999999999999995
No 8
>4fno_A PTH, peptidyl-tRNA hydrolase; 2.25A {Pseudomonas aeruginosa} PDB: 4djj_A* 4erx_A 4dhw_A
Probab=100.00 E-value=3.7e-54 Score=334.96 Aligned_cols=114 Identities=41% Similarity=0.709 Sum_probs=108.5
Q ss_pred CeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCC-cceeeeEEEEEEECCeeEEEEeCCchhhcchhhHHHHHHHc
Q 032899 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYY 96 (131)
Q Consensus 18 ~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~-~~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~~ 96 (131)
|+|||||||||++|++|||||||+++|+||+++++++. +.++++.++++.+.+++|+|+||+||||+||++|+++++||
T Consensus 4 m~LIvGLGNPG~~Y~~TRHNiGf~viD~La~~~~~~~~~~~k~~~~~~~~~~~g~~v~LlKP~TyMNlSG~aV~~~~~fy 83 (194)
T 4fno_A 4 VQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFF 83 (194)
Confidence 67999999999999999999999999999999998876 45678888888888999999999999999999999999999
Q ss_pred CCCCCcEEEEeccCCCCCceEEEecCCCCCCCCCC
Q 032899 97 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGC 131 (131)
Q Consensus 97 ki~~~~llVvhDdldl~~G~vrlk~~Gs~~GHNG~ 131 (131)
+++++++||||||||||+|++|+|.+||++||||+
T Consensus 84 ki~~~~ilVihDdldLp~G~irlk~gGs~gGHNGL 118 (194)
T 4fno_A 84 RIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGL 118 (194)
Confidence 99999999999999999999999999999999996
No 9
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=77.10 E-value=2.9 Score=30.22 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=23.1
Q ss_pred CeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcC
Q 032899 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQG 51 (131)
Q Consensus 18 ~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~ 51 (131)
+.+|+|+|||= ..-==+|..++++|++++.
T Consensus 2 ~ilVlGiGN~l----~gDDG~G~~v~~~L~~~~~ 31 (162)
T 1cfz_A 2 RILVLGVGNIL----LTDEAIGVRIVEALEQRYI 31 (162)
T ss_dssp CEEEEEESCTT----BGGGGHHHHHHHHHHHHEE
T ss_pred CEEEEEECCcc----cccccHHHHHHHHHHhhCC
Confidence 47899999992 1222599999999998753
No 10
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=73.21 E-value=4.4 Score=29.29 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=22.7
Q ss_pred CCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHc
Q 032899 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQ 50 (131)
Q Consensus 17 ~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~ 50 (131)
++.+|+|+|||= ..-==+|..++++|++.+
T Consensus 3 m~ilVlGiGN~L----~gDDG~G~~v~~~L~~~~ 32 (157)
T 3pu6_A 3 LKKVLLCVGNEL----RGDDGVAIALGRLVEEQM 32 (157)
T ss_dssp CCEEEEEECCTT----BGGGGHHHHHHHHHHHHC
T ss_pred CCEEEEEECCcc----cccccHHHHHHHHHHhhC
Confidence 467999999993 223358999999999543
No 11
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=71.82 E-value=4.1 Score=29.42 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=22.3
Q ss_pred CCeeEEEecCCCcCcCcCcchHHHHHHHHHHHH
Q 032899 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAES 49 (131)
Q Consensus 17 ~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~ 49 (131)
++.+|+|+|||= ..-==+|..++++|.+.
T Consensus 4 M~~lVlGiGN~l----~gDDG~G~~v~~~L~~~ 32 (159)
T 2e85_A 4 VTDVLLCVGNSM----MGDDGAGPLLAEKCAAA 32 (159)
T ss_dssp CCEEEEEECCGG----GGGGGHHHHHHHHHHHS
T ss_pred CCEEEEEECCcc----cccccHHHHHHHHHhhh
Confidence 457999999992 12225999999999985
No 12
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=53.56 E-value=12 Score=30.12 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=29.2
Q ss_pred CCchhhcchhhHHHHHHHcCCCCCcEEEEeccCCCC
Q 032899 78 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 113 (131)
Q Consensus 78 P~tyMN~SG~~v~~~~~~~ki~~~~llVvhDdldl~ 113 (131)
|...|=-|-+.+.+.++.++|..++.||||||-+.-
T Consensus 90 ~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~ 125 (327)
T 3utn_X 90 PYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNF 125 (327)
T ss_dssp SSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSS
T ss_pred CCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCc
Confidence 344566677888889999999999999999987653
No 13
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium} SCOP: c.56.1.2
Probab=45.66 E-value=16 Score=30.49 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=54.2
Q ss_pred CCCCeeEEEecCCCcCcCcCcchHHHHHHHHHHHHcCCCCCcceeeeEEEEEEE--CCeeEEEEeC----Cchhhcchhh
Q 032899 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVLLAKP----QTYMNLSGES 88 (131)
Q Consensus 15 ~~~~~livGLGNPG~~Y~~TRHNvG~~~ld~La~~~~~~~~~~~~~~~~~~~~~--~~~~v~l~kP----~tyMN~SG~~ 88 (131)
.....|||||||. .-|--..|-.+++.|. ++ +.-+ . ++.-.+ .-.+|.-+-| +|=||. ++.
T Consensus 111 ~~~~iLVVGLGN~----~vTpDALGP~Vv~~l~----vT--rHl~-~-~g~~~~~~~~~pVsAiaPGVmg~TGiEt-~Ei 177 (371)
T 1c8b_A 111 DDASCLVVGLGNL----SVTPDALGPKAVDNLL----IT--RHLF-E-LQPESVQDGFRPVSAIVPGVMGMTGIET-SDI 177 (371)
T ss_dssp TTCCEEEEECSCS----SSGGGCHHHHHHTTCC----CC--HHHH-H-HSCCSSCSSCCCEEEECSGGGCCCSSCH-HHH
T ss_pred CCCcEEEEEcCCC----CcCccccCcceeeeee----EE--eehh-h-hCchhhccCCCceEEecCCccccccccH-HHH
Confidence 4567899999997 5688899999988653 11 0000 0 111011 1235666666 444543 345
Q ss_pred HHHHHHHcCCCCCcEEEEeccCCC----CCc-eEEEecCC
Q 032899 89 TGPLAAYYKLPLNRVLVFHDDMGL----PCG-VLRLRHNG 123 (131)
Q Consensus 89 v~~~~~~~ki~~~~llVvhDdldl----~~G-~vrlk~~G 123 (131)
++.+.+.++ .++||.-|-|-. -+| +|++...|
T Consensus 178 I~gIv~k~k---Pd~VIAIDALAars~~Rl~~TIQIsdTG 214 (371)
T 1c8b_A 178 IFGVVKKVN---PDFIIAIDALAARSIERVNATIQISDSG 214 (371)
T ss_dssp HHHHHHHHC---CSEEEEEEEECCSSGGGSSSEEEEETTC
T ss_pred HHHHHHhcC---CCEEEEEchhhcCcHhhcCCeEEECCCC
Confidence 666666654 567888887654 355 67776544
No 14
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=42.43 E-value=12 Score=25.71 Aligned_cols=29 Identities=7% Similarity=0.172 Sum_probs=25.9
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC--CCC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM--GLP 113 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl--dl~ 113 (131)
++.++..+++.++++++++++|=|.+ |+.
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~ 189 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQ 189 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCH
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhH
Confidence 67888999999999999999999997 665
No 15
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=39.39 E-value=19 Score=26.08 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=22.9
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 201 K~~~l~~l~~~lgi~~~~~i~~GD~~ 226 (274)
T 3fzq_A 201 KGKAIKRLQERLGVTQKETICFGDGQ 226 (274)
T ss_dssp HHHHHHHHHHHHTCCSTTEEEECCSG
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCCh
Confidence 46778899999999999999999875
No 16
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=37.60 E-value=20 Score=26.09 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=22.8
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
|.++..+++.+++++++++.+=|+.
T Consensus 196 ~~~l~~l~~~lgi~~~~~ia~GD~~ 220 (268)
T 3r4c_A 196 ATGLSLFADYYRVKVSEIMACGDGG 220 (268)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEECCcH
Confidence 5889999999999999999999975
No 17
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=36.30 E-value=20 Score=26.26 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=21.6
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 198 K~~~l~~l~~~lgi~~~~~i~~GD~~ 223 (279)
T 3mpo_A 198 KGGTLSELVDQLGLTADDVMTLGDQG 223 (279)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEC--CC
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCch
Confidence 47889999999999999999999875
No 18
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=35.58 E-value=22 Score=26.16 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=23.1
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 203 K~~~l~~l~~~lgi~~~~~i~~GD~~ 228 (290)
T 3dnp_A 203 KEAGLALVASELGLSMDDVVAIGHQY 228 (290)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCch
Confidence 46788999999999999999999864
No 19
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=35.40 E-value=19 Score=26.15 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=22.2
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
|.++..+++.+++++++++++=|..
T Consensus 185 ~~~l~~l~~~lgi~~~~~ia~GDs~ 209 (258)
T 2pq0_A 185 AEGIRMMIEKLGIDKKDVYAFGDGL 209 (258)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred HHHHHHHHHHhCCCHHHEEEECCcH
Confidence 6678999999999999999999964
No 20
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=35.38 E-value=21 Score=26.15 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=23.0
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
|.++..+++.+++++++++++=|..
T Consensus 199 ~~~l~~l~~~lgi~~~~~i~~GD~~ 223 (279)
T 4dw8_A 199 ALSLSVLLENIGMTREEVIAIGDGY 223 (279)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCh
Confidence 7889999999999999999999975
No 21
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=34.20 E-value=26 Score=22.04 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=26.5
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccCCCCCce
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 116 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdldl~~G~ 116 (131)
|.+++.+++.++++++.++|+.|.--+|...
T Consensus 20 g~Tv~dLL~~Lgl~~~~VvV~vNG~~v~~d~ 50 (74)
T 2l32_A 20 DGTYADLVRAVDLSPHEVTVLVDGRPVPEDQ 50 (74)
T ss_dssp TCSHHHHHHTTCCCSSCCCEECCCCCCCTTS
T ss_pred CCcHHHHHHHcCCCcceEEEEECCEECCHHH
Confidence 5689999999999999999988887777665
No 22
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=34.13 E-value=24 Score=26.26 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=23.0
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 212 K~~~l~~l~~~lgi~~~e~ia~GD~~ 237 (283)
T 3dao_A 212 KWTALSYLIDRFDLLPDEVCCFGDNL 237 (283)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 46689999999999999999999864
No 23
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=34.03 E-value=30 Score=22.68 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=18.9
Q ss_pred HHHHcCCCCCcEEEEeccCCCCCc
Q 032899 92 LAAYYKLPLNRVLVFHDDMGLPCG 115 (131)
Q Consensus 92 ~~~~~ki~~~~llVvhDdldl~~G 115 (131)
+.+..+++++++.|..+|++ .+|
T Consensus 84 l~~~lgi~~~~v~I~~~e~~-~wg 106 (112)
T 3b64_A 84 ITKECGIVADRIFVLYFSPL-HCG 106 (112)
T ss_dssp HHHHHCCCGGGEEEEEECCS-CCE
T ss_pred HHHHhCcCcceEEEEEEEhh-Hee
Confidence 44567899999999999998 665
No 24
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=34.02 E-value=24 Score=26.56 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=22.5
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
|.++..+++.+++++++++++=|+.
T Consensus 230 ~~al~~l~~~lgi~~~e~i~~GDs~ 254 (304)
T 3l7y_A 230 GWALQQLLKRWNFTSDHLMAFGDGG 254 (304)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHhCcCHHHEEEECCCH
Confidence 5689999999999999999999975
No 25
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=33.64 E-value=25 Score=26.15 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=23.2
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++.+=|+.
T Consensus 210 K~~al~~l~~~lgi~~~~~ia~GD~~ 235 (285)
T 3pgv_A 210 KGHALEAVAKMLGYTLSDCIAFGDGM 235 (285)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 46789999999999999999999975
No 26
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=30.67 E-value=36 Score=24.11 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC--CCC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM--GLP 113 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl--dl~ 113 (131)
.+.++..+++.++++++++++|=|.. |++
T Consensus 192 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~ 222 (271)
T 2x4d_A 192 SPEFFKSALQAIGVEAHQAVMIGDDIVGDVG 222 (271)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTTHH
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHHH
Confidence 46678889999999999999999976 554
No 27
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=28.03 E-value=45 Score=22.95 Aligned_cols=26 Identities=15% Similarity=-0.008 Sum_probs=23.1
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++..+..+++.++++++++++|=|.+
T Consensus 164 ~~~~~~~~~~~lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 164 RPEIFHFALSATQSELRESLMIGDSW 189 (240)
T ss_dssp SHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHcCCCcccEEEECCCc
Confidence 45678889999999999999999996
No 28
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=27.76 E-value=40 Score=23.30 Aligned_cols=26 Identities=8% Similarity=0.001 Sum_probs=22.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.+.++..+++.++++++++++|=|.+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~ 203 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNL 203 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCc
Confidence 35677888999999999999999985
No 29
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=27.39 E-value=35 Score=23.53 Aligned_cols=24 Identities=25% Similarity=0.530 Sum_probs=19.8
Q ss_pred HHHHHcCCCCCcEEEEeccCCCCCc
Q 032899 91 PLAAYYKLPLNRVLVFHDDMGLPCG 115 (131)
Q Consensus 91 ~~~~~~ki~~~~llVvhDdldl~~G 115 (131)
.+.+..+++++++.|..+|++ .+|
T Consensus 104 ~l~~~LgI~~~rvyI~f~d~~-~wg 127 (133)
T 3fwt_A 104 AITKECGIPAERIYVFYYSTK-HCG 127 (133)
T ss_dssp HHHHHHCCCGGGEEEEEEEES-CCE
T ss_pred HHHHHhCcChhhEEEEEEEhh-hEe
Confidence 345667999999999999998 665
No 30
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=26.74 E-value=43 Score=22.60 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.0
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
+.++..+++.+++++++++++-|..
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD~~ 169 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGDGA 169 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHcCCCHHHEEEEecCh
Confidence 5678889999999999999999974
No 31
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=26.38 E-value=46 Score=22.93 Aligned_cols=26 Identities=8% Similarity=-0.127 Sum_probs=22.5
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++..+..+++.++++++++++|=|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (230)
T 3vay_A 157 DPAPFLEALRRAKVDASAAVHVGDHP 182 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred CHHHHHHHHHHhCCCchheEEEeCCh
Confidence 34567889999999999999999987
No 32
>3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1
Probab=25.60 E-value=69 Score=19.20 Aligned_cols=39 Identities=28% Similarity=0.397 Sum_probs=17.6
Q ss_pred HHHHcCCCCCcEEEEe------ccCCC-----CCc---eEEEecCCCCCCCCC
Q 032899 92 LAAYYKLPLNRVLVFH------DDMGL-----PCG---VLRLRHNGGHGGHNG 130 (131)
Q Consensus 92 ~~~~~ki~~~~llVvh------Ddldl-----~~G---~vrlk~~Gs~~GHNG 130 (131)
+.+..++|+++.-+++ ||..| .-| .+-+|..|+.+|+.|
T Consensus 33 i~~~~~i~~~~qrL~~~g~~L~d~~tL~~~~i~~~~~l~l~~r~~GG~ggg~~ 85 (85)
T 3mtn_B 33 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKWSTLFLLLRLRGGGGGGSG 85 (85)
T ss_dssp HHHHHCCCGGGCEEEETTEECCTTSBTGGGTCCTTCEEEEECCCCCC------
T ss_pred HHHHHCcChHHEEEEECCEECCCCCCHHHcCCCCCCEEEEEEECcCCCCCCCC
Confidence 5566788887654433 44322 222 234466777777765
No 33
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=24.66 E-value=42 Score=24.47 Aligned_cols=26 Identities=12% Similarity=0.247 Sum_probs=22.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 188 K~~~~~~~~~~~~~~~~~~~~iGD~~ 213 (261)
T 2rbk_A 188 KQKGIDEIIRHFGIKLEETMSFGDGG 213 (261)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 35678889999999999999999974
No 34
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=23.75 E-value=44 Score=24.60 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=22.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.|.++..+++.+++++++++++=|..
T Consensus 192 K~~~~~~l~~~l~i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 192 KANGISRLLKRWDLSPQNVVAIGDSG 217 (271)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 35688889999999999999999974
No 35
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=23.73 E-value=46 Score=22.83 Aligned_cols=26 Identities=4% Similarity=0.026 Sum_probs=22.6
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.+.++..+++.++++++++++|=|..
T Consensus 144 ~~~~~~~~~~~lgi~~~~~i~iGD~~ 169 (226)
T 3mc1_A 144 KEDVIRYAMESLNIKSDDAIMIGDRE 169 (226)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCH
Confidence 56778889999999999999999864
No 36
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=23.73 E-value=58 Score=22.31 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=22.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++..+..+++.+++++++++.|=|..
T Consensus 149 ~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 149 DPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 45678889999999999999998864
No 37
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=23.53 E-value=48 Score=24.64 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=22.5
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|..
T Consensus 217 K~~~~~~~~~~~~~~~~~~~~~GD~~ 242 (288)
T 1nrw_A 217 KGQALKRLAKQLNIPLEETAAVGDSL 242 (288)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEEcCCH
Confidence 35678899999999999999999874
No 38
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=23.53 E-value=51 Score=22.33 Aligned_cols=25 Identities=12% Similarity=-0.012 Sum_probs=22.0
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
+.++..+++.++++++++++|=|..
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~ 177 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSV 177 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 5778889999999999999998864
No 39
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=22.98 E-value=46 Score=24.76 Aligned_cols=26 Identities=15% Similarity=0.266 Sum_probs=22.8
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|+.
T Consensus 199 K~~~l~~l~~~~~~~~~~~~~~GD~~ 224 (282)
T 1rkq_A 199 KGTGVKSLADVLGIKPEEIMAIGDQE 224 (282)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred CHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 46788999999999999999999874
No 40
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=22.80 E-value=62 Score=22.23 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=22.8
Q ss_pred chhhHHHHHHHcC-CCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYK-LPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~k-i~~~~llVvhDdl 110 (131)
++..+..+++.++ ++++++++|=|..
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~i~vGD~~ 186 (238)
T 3ed5_A 160 MKEYFNYVFERIPQFSAEHTLIIGDSL 186 (238)
T ss_dssp CHHHHHHHHHTSTTCCGGGEEEEESCT
T ss_pred ChHHHHHHHHHcCCCChhHeEEECCCc
Confidence 4567788999999 9999999999997
No 41
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=22.64 E-value=52 Score=24.01 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=22.9
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++.+=|+.
T Consensus 163 K~~~l~~l~~~~~~~~~~~~~~GD~~ 188 (244)
T 1s2o_A 163 KGNATQYLQQHLAMEPSQTLVCGDSG 188 (244)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCch
Confidence 47789999999999999999999863
No 42
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=22.50 E-value=62 Score=22.42 Aligned_cols=25 Identities=12% Similarity=-0.039 Sum_probs=21.7
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
+..+..+++.++++++++++|=|..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~ 196 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHN 196 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCh
Confidence 5677889999999999999999863
No 43
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=22.47 E-value=57 Score=21.82 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=22.2
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++..+..+++.+++++++++.|-|..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~i~iGD~~ 167 (216)
T 2pib_A 142 DPEIYLLVLERLNVVPEKVVVFEDSK 167 (216)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred CcHHHHHHHHHcCCCCceEEEEeCcH
Confidence 45678889999999999999998864
No 44
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=22.42 E-value=58 Score=21.75 Aligned_cols=26 Identities=15% Similarity=0.118 Sum_probs=22.2
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++..+..+++.++++++++++|=|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iGD~~ 172 (214)
T 3e58_A 147 NPEIYLTALKQLNVQASRALIIEDSE 172 (214)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSH
T ss_pred ChHHHHHHHHHcCCChHHeEEEeccH
Confidence 55678889999999999999998863
No 45
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=22.31 E-value=52 Score=25.03 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=23.0
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
-|.++..+++.+++++++++++=|+.
T Consensus 225 K~~~l~~l~~~~~~~~~~~~~~GD~~ 250 (301)
T 2b30_A 225 KYTGINYLLKHYNISNDQVLVVGDAE 250 (301)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred cHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 47789999999999999999999874
No 46
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=22.21 E-value=55 Score=22.42 Aligned_cols=26 Identities=23% Similarity=0.221 Sum_probs=22.0
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.+.++..+++.++++++++++|=|..
T Consensus 145 k~~~~~~~~~~l~~~~~~~i~iGD~~ 170 (229)
T 2fdr_A 145 KPDIFLHGAAQFGVSPDRVVVVEDSV 170 (229)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCChhHeEEEcCCH
Confidence 45678889999999999999998864
No 47
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=21.66 E-value=65 Score=21.93 Aligned_cols=24 Identities=8% Similarity=-0.061 Sum_probs=20.9
Q ss_pred hhhHHHHHHHcCCCCCcEEEEecc
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDD 109 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDd 109 (131)
+..+..+++.++++++++++|=|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~ 164 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDS 164 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESS
T ss_pred cHHHHHHHHHcCCCcccEEEECCC
Confidence 566778899999999999999886
No 48
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=21.59 E-value=58 Score=22.77 Aligned_cols=25 Identities=12% Similarity=0.106 Sum_probs=21.3
Q ss_pred chhhHHHHHHHcCCCCCcEEEEecc
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDD 109 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDd 109 (131)
.+..+..+++.++++++++++|=|.
T Consensus 175 ~~~~~~~~~~~lgi~~~~~~~iGD~ 199 (254)
T 3umc_A 175 DPQVYLGACRLLDLPPQEVMLCAAH 199 (254)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCc
Confidence 4566778899999999999999986
No 49
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=21.58 E-value=75 Score=21.67 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=22.2
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
...+..+++.++++++++++|=|..
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~ 185 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTY 185 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred HHHHHHHHHHcCCCccceEEECCCh
Confidence 5667788999999999999999987
No 50
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=21.51 E-value=57 Score=22.59 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=22.6
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.+..+..+++.++++++++++|=|..
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 56778889999999999999998864
No 51
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=21.22 E-value=55 Score=23.14 Aligned_cols=26 Identities=8% Similarity=0.011 Sum_probs=22.7
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.+..+..+++.+++++++++.|=|..
T Consensus 84 K~~~l~~~~~~~gi~~~~~~~vGD~~ 109 (168)
T 3ewi_A 84 KLATVDEWRKEMGLCWKEVAYLGNEV 109 (168)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hHHHHHHHHHHcCcChHHEEEEeCCH
Confidence 45778889999999999999999976
No 52
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=21.13 E-value=75 Score=18.50 Aligned_cols=20 Identities=10% Similarity=0.188 Sum_probs=16.6
Q ss_pred HHHHcCCCCCcEEEEeccCC
Q 032899 92 LAAYYKLPLNRVLVFHDDMG 111 (131)
Q Consensus 92 ~~~~~ki~~~~llVvhDdld 111 (131)
+.+..+++++++.|+.+|++
T Consensus 26 ~~~~lg~~~~~v~V~i~E~~ 45 (62)
T 3m20_A 26 AAEIYGMDRSAITILIHEPP 45 (62)
T ss_dssp HHHHHTCCTTSCEEEEECCC
T ss_pred HHHHhCcCcceEEEEEEEeC
Confidence 45667899999999999885
No 53
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=21.05 E-value=59 Score=23.94 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=22.8
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.|.++..+++.+++++++++++=|+.
T Consensus 212 k~~~~~~~~~~~~~~~~~~~~~GDs~ 237 (289)
T 3gyg_A 212 KNEIVTFMLEKYNLNTERAIAFGDSG 237 (289)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred HHHHHHHHHHHcCCChhhEEEEcCCH
Confidence 46788899999999999999999864
No 54
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=21.02 E-value=65 Score=21.98 Aligned_cols=26 Identities=15% Similarity=0.126 Sum_probs=22.0
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
+...+..+++.++++++++++|=|..
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 34578889999999999999999864
No 55
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=20.79 E-value=64 Score=22.84 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=23.6
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC--CCC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM--GLP 113 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl--dl~ 113 (131)
+...+..+++.++++++++++|=|.. |+.
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~ 211 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVD 211 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHH
Confidence 34567788899999999999999987 544
No 56
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=20.43 E-value=70 Score=22.42 Aligned_cols=25 Identities=12% Similarity=-0.068 Sum_probs=21.6
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
+..+..+++.++++++++++|=|..
T Consensus 169 ~~~~~~~~~~lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 169 PEPYLMALKKGGLKADEAVVIENAP 193 (243)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 4567889999999999999999864
No 57
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=20.38 E-value=58 Score=22.49 Aligned_cols=25 Identities=12% Similarity=-0.015 Sum_probs=21.1
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
...+..+++.++++++++++|=|..
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~ 173 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAE 173 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCH
Confidence 4567889999999999999998863
No 58
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=20.31 E-value=65 Score=23.20 Aligned_cols=26 Identities=12% Similarity=0.263 Sum_probs=22.8
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
++.++..+++.+++++++++.|=|.+
T Consensus 197 k~~~~~~~~~~lgi~~~e~i~iGD~~ 222 (271)
T 1vjr_A 197 NPLVVDVISEKFGVPKERMAMVGDRL 222 (271)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCH
T ss_pred CHHHHHHHHHHhCCCCceEEEECCCc
Confidence 45678889999999999999999985
No 59
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=20.28 E-value=71 Score=21.89 Aligned_cols=25 Identities=4% Similarity=-0.189 Sum_probs=21.9
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
...+..+++.++++++++++|=|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNP 182 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCT
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCc
Confidence 4557788999999999999999987
No 60
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=20.26 E-value=57 Score=23.40 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=22.4
Q ss_pred chhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 85 SG~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
.|.++..+++.+++++++++++=|..
T Consensus 154 K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 154 KGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 45678889999999999999999974
No 61
>1wfy_A Regulator of G-protein signaling 14; RAP1/RAP2 interacting protein; regulators of G-protein signaling, RAS family, structural genomics; NMR {Mus musculus} SCOP: d.15.1.5
Probab=20.25 E-value=29 Score=23.93 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=23.8
Q ss_pred EEEeCCchhhcchhhHHHHHHHcCCCCCcEEEEec
Q 032899 74 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHD 108 (131)
Q Consensus 74 ~l~kP~tyMN~SG~~v~~~~~~~ki~~~~llVvhD 108 (131)
+..||..= =++++++++.+|++..++++|...
T Consensus 32 IksKptK~---l~evLrPIL~KY~l~l~qv~v~~~ 63 (104)
T 1wfy_A 32 ISAKPTKR---LQEALQPILAKHGLSLDQVVLHRP 63 (104)
T ss_dssp EEECSSSB---TTTTTHHHHTTTTCCTTTCCBCCT
T ss_pred EEecCCCc---HHHHHHHHHHHcCCChhhEEEEec
Confidence 55577432 278999999999999998777543
No 62
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=20.06 E-value=71 Score=21.61 Aligned_cols=25 Identities=8% Similarity=-0.063 Sum_probs=20.8
Q ss_pred hhhHHHHHHHcCCCCCcEEEEeccC
Q 032899 86 GESTGPLAAYYKLPLNRVLVFHDDM 110 (131)
Q Consensus 86 G~~v~~~~~~~ki~~~~llVvhDdl 110 (131)
...+..+++.++++++++++|=|..
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~ 172 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQ 172 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCH
Confidence 4467788999999999999998863
Done!