Query 032900
Match_columns 131
No_of_seqs 127 out of 173
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 11:43:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032900.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032900hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v54j_ f.23.4.1 (J:) Mitochon 35.6 17 0.0012 22.1 3.2 15 110-124 39-53 (58)
2 d1i5pa3 f.1.3.1 (A:1-263) delt 22.5 28 0.0021 25.7 3.1 52 58-117 32-83 (263)
3 d2prra1 a.152.1.3 (A:5-194) Un 9.8 1.3E+02 0.0098 19.6 3.6 61 59-123 21-83 (190)
4 d1nvpb_ a.32.1.1 (B:) Large ch 9.2 75 0.0055 17.9 1.7 14 57-70 27-40 (43)
5 d1nh2b_ a.32.1.1 (B:) Large ch 8.6 82 0.006 17.9 1.7 15 56-70 28-42 (46)
6 d1kqfb2 f.23.22.1 (B:246-290) 7.9 2E+02 0.014 16.1 3.5 23 66-89 6-28 (45)
7 d2axtk1 f.23.36.1 (K:10-46) Ph 6.4 97 0.007 17.0 1.2 19 98-116 12-30 (37)
8 d1ciya3 f.1.3.1 (A:33-255) del 6.3 1.4E+02 0.01 20.8 2.4 26 89-116 8-33 (223)
9 d2fxta1 d.17.4.13 (A:234-425) 6.1 1.1E+02 0.0077 21.2 1.6 16 61-77 2-18 (192)
10 d1xkta_ c.69.1.22 (A:) Fatty a 6.0 77 0.0056 19.6 0.7 49 57-105 66-115 (286)
No 1
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.59 E-value=17 Score=22.14 Aligned_cols=15 Identities=27% Similarity=0.220 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHhhh
Q 032900 110 ELIGILFSTWFVYRY 124 (131)
Q Consensus 110 ELVGigYt~WF~yRy 124 (131)
-++|++|+.|+.|-.
T Consensus 39 ~~~G~~~s~~~l~~a 53 (58)
T d1v54j_ 39 CLGGTLYSLYCLGWA 53 (58)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 368999999888753
No 2
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=22.51 E-value=28 Score=25.73 Aligned_cols=52 Identities=23% Similarity=0.252 Sum_probs=26.3
Q ss_pred hhHHHHHHHHhhhhhcChhHHHHHHHHHHHHHHHHHHHHHHhhccCCchhhHHHHHHHHH
Q 032900 58 LTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITAIDKLPIIPNALELIGILFS 117 (131)
Q Consensus 58 ~ei~k~lq~~Wd~~~e~k~~~~~l~~~aival~~~~~vl~AId~iPLlp~llELVGigYt 117 (131)
+++-|++.| |++ ....+. .+.++|. +.+.++.++-.+..-+-+-.++|++|-
T Consensus 32 ~~~~k~w~~-~~~-~~~~~~-~~~ivg~-----i~s~l~~~l~~~~~~~ils~l~~~lwP 83 (263)
T d1i5pa3 32 DTIQKEWME-WKR-TDHSLY-VAPVVGT-----VSSFLLKKVGSLIGKRILSELWGIIFP 83 (263)
T ss_dssp HHHHHHHHH-HHH-HSCCCS-CCTHHHH-----HHHHHHHHHTSTTCCCCHHHHHHHHSG
T ss_pred ccchhhHHH-HHh-cCcchh-HHHHHHH-----HHHHHHHhhhhHhHHHHHHHHHHHHcC
Confidence 577888877 887 433333 2323322 222333343333333345677777764
No 3
>d2prra1 a.152.1.3 (A:5-194) Uncharacterized protein Reut_A2532 {Ralstonia eutropha [TaxId: 106590]}
Probab=9.79 E-value=1.3e+02 Score=19.58 Aligned_cols=61 Identities=11% Similarity=-0.081 Sum_probs=33.2
Q ss_pred hHHHHHHHHhhhhhcChhHHHHHHHHHHHHHHHHHHHHHHh--hccCCchhhHHHHHHHHHHHHHhh
Q 032900 59 TVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITAI--DKLPIIPNALELIGILFSTWFVYR 123 (131)
Q Consensus 59 ei~k~lq~~Wd~~~e~k~~~~~l~~~aival~~~~~vl~AI--d~iPLlp~llELVGigYt~WF~yR 123 (131)
++++.++++... ..|-+.+.+--=. .+.......+++ ++-+|=+...|+|++-.+-..-..
T Consensus 21 ~~~~~~~~~~G~-vpn~~~~la~~P~---~l~~~~~~~~~~~~~~~~L~~~~~Eli~l~vs~~n~c~ 83 (190)
T d2prra1 21 QRILEVQDKAGF-VPNVFLTLAHRPD---EFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCL 83 (190)
T ss_dssp HHHHHHHHHHSS-CCHHHHHHTTSHH---HHHHHHHHHHHHHSSCSSSCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhCC-CHHHHHHHHhCHH---HHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHhCCc
Confidence 444444444443 3344444332111 233444555666 466788899999999887544333
No 4
>d1nvpb_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.18 E-value=75 Score=17.88 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=12.2
Q ss_pred hhhHHHHHHHHhhh
Q 032900 57 SLTVFKSVQNVWDN 70 (131)
Q Consensus 57 ~~ei~k~lq~~Wd~ 70 (131)
+.++++.+|+.|++
T Consensus 27 De~vL~eLk~~We~ 40 (43)
T d1nvpb_ 27 DEQVLMELKTLWEN 40 (43)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 46899999999986
No 5
>d1nh2b_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.55 E-value=82 Score=17.90 Aligned_cols=15 Identities=13% Similarity=0.605 Sum_probs=12.9
Q ss_pred chhhHHHHHHHHhhh
Q 032900 56 TSLTVFKSVQNVWDN 70 (131)
Q Consensus 56 ~~~ei~k~lq~~Wd~ 70 (131)
-+.++++.+|..|+.
T Consensus 28 vde~vL~eLk~~We~ 42 (46)
T d1nh2b_ 28 IDEQTLQDLKNIWQK 42 (46)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 356999999999986
No 6
>d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
Probab=7.87 E-value=2e+02 Score=16.13 Aligned_cols=23 Identities=13% Similarity=0.189 Sum_probs=15.7
Q ss_pred HHhhhhhcChhHHHHHHHHHHHHH
Q 032900 66 NVWDNSSEDRLGLIGLGFAGIVAL 89 (131)
Q Consensus 66 ~~Wd~~~e~k~~~~~l~~~aival 89 (131)
+.|.. .-+++++++++.+++.++
T Consensus 6 ~lWKg-v~Kpl~~~~~~~~~~~~~ 28 (45)
T d1kqfb2 6 SLWKG-ALKPLAAAGFIATFAGLI 28 (45)
T ss_dssp HHHHT-THHHHHHHHHHHHHHHHH
T ss_pred HHhhh-hHHHHHHHHHHHHHHHHH
Confidence 45777 777888888776665543
No 7
>d2axtk1 f.23.36.1 (K:10-46) Photosystem II reaction center protein K, PsbK {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.38 E-value=97 Score=17.02 Aligned_cols=19 Identities=26% Similarity=0.623 Sum_probs=13.7
Q ss_pred HhhccCCchhhHHHHHHHH
Q 032900 98 AIDKLPIIPNALELIGILF 116 (131)
Q Consensus 98 AId~iPLlp~llELVGigY 116 (131)
-+|-+|++|-+|=|..+.|
T Consensus 12 ivdvlPiIPv~f~lLafVW 30 (37)
T d2axtk1 12 LVDVLPVIPVLFLALAFVW 30 (37)
T ss_dssp HHHHGGGHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHH
Confidence 3677888888887766554
No 8
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=6.28 E-value=1.4e+02 Score=20.81 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhccCCchhhHHHHHHHH
Q 032900 89 LWASVNLITAIDKLPIIPNALELIGILF 116 (131)
Q Consensus 89 l~~~~~vl~AId~iPLlp~llELVGigY 116 (131)
+-+++.+++.. +|..+.++.++|++|
T Consensus 8 ~~~~~~ll~~~--iP~~g~~~~li~~lw 33 (223)
T d1ciya3 8 LSLTQFLLSEF--VPGAGFVLGLVDIIW 33 (223)
T ss_dssp HHHHHHHHHCC--SSSHHHHHHHHHHTT
T ss_pred HHHHHHHhhhc--CCchHHHHHHHHHHc
Confidence 33444444433 788888887777765
No 9
>d2fxta1 d.17.4.13 (A:234-425) Translocase of inner mitochondrial membrane TIMM44 (TIM44), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.14 E-value=1.1e+02 Score=21.16 Aligned_cols=16 Identities=44% Similarity=0.760 Sum_probs=12.8
Q ss_pred HHHHHHH-hhhhhcChhH
Q 032900 61 FKSVQNV-WDNSSEDRLG 77 (131)
Q Consensus 61 ~k~lq~~-Wd~~~e~k~~ 77 (131)
++++|++ ||+ .||++.
T Consensus 2 ~~~~~~~~~~~-sdnp~v 18 (192)
T d2fxta1 2 IQSLKNKLWDE-SENPLI 18 (192)
T ss_dssp HHHHHHHHHTC-CSSHHH
T ss_pred hhHhccccccc-CCCcce
Confidence 4688987 999 999754
No 10
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.96 E-value=77 Score=19.64 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=30.7
Q ss_pred hhhHHHHHHHHhhhhh-cChhHHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 032900 57 SLTVFKSVQNVWDNSS-EDRLGLIGLGFAGIVALWASVNLITAIDKLPII 105 (131)
Q Consensus 57 ~~ei~k~lq~~Wd~~~-e~k~~~~~l~~~aival~~~~~vl~AId~iPLl 105 (131)
-+++..+.-+...+.. ++++.++|.-.|+.+++.+..-.-+.+.++.++
T Consensus 66 ~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l 115 (286)
T d1xkta_ 66 IHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTH 115 (286)
T ss_dssp HHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHHHHC------C
T ss_pred HHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeE
Confidence 4566666656555522 358889999999999999888776655555443
Done!