BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032901
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LYK9|RS263_ARATH 40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2
SV=1
Length = 130
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/110 (85%), Positives = 100/110 (90%), Gaps = 3/110 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MTFKRRNGGRNKH RGHVK IRCSNCGKCCPK AIKRF+VRNIVEQAA+RDVQEA VY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF-RRRDDVPK 107
GYTLPKLYAK QYCVSCAIHSHVVRVRSRTNRR+R PP RF RR++D PK
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPK 110
>sp|P49206|RS261_ARATH 40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2
SV=2
Length = 131
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 100/112 (89%), Gaps = 3/112 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MTFKRRNGGRNKH RGHV IRCSNCGKCCPK AIKRF+VRNIVEQAA+RDVQEA VY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF-RRRDDVPKAG 109
GYTLPKLYAK QYCVSCAIHSHVVRVRSRTNRR+R PP RF RR++D PK G
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPG 112
>sp|Q8LPJ7|RS262_ARATH 40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2
SV=2
Length = 133
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 100/112 (89%), Gaps = 3/112 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MTFKRRNGGRNKH RGHV IRCSNCGKCCPK AIKRF+VRNIVEQAA+RDVQEA VY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF-RRRDDVPKAG 109
GYTLPKLYAK QYCVSCAIHSHVVRVRSRTNRR+R PP RF RR++D PK G
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPG 112
>sp|P49216|RS26_ORYSJ 40S ribosomal protein S26 OS=Oryza sativa subsp. japonica
GN=RPS26 PE=2 SV=2
Length = 133
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 80/86 (93%), Gaps = 2/86 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPK AIKRF VRNIVEQAA+RDVQEACV+D
Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRV 84
GY LPKLYAK+ +CVSCAIH+H+VRV
Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHIVRV 86
>sp|Q9UTG4|RS26B_SCHPO 40S ribosomal protein S26-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26b PE=3 SV=1
Length = 119
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GRNKHGRGHVKF+RC NC + PK AIKR+ +RN+VE AA+RD+ EA VY
Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYS 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRRDD 104
YT+PKLY K+QYCVSCAIHS VVRVRSR RRIR PP R R D
Sbjct: 61 EYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPRVRYNRD 106
>sp|P13008|RS26_DROME 40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1
SV=1
Length = 114
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRNGGRNKH RGHVK +RC+NC +C PK AIK+F++RNIVE AAVRD+ EA ++D
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQR 98
Y LPKLYAK+ YCVSCAIHS VVR RSR RRIR PP R
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLR 100
>sp|O93931|RS26_SCHCO 40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2
SV=1
Length = 126
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCC--PKAIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRNGGRNK GRGHV F+RCSNC +C KAIKRF VRN+VE AA+RD+ +A VY
Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYP 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRRD 103
Y +PKLY K+ YCVSCAIHSHVVRVRSR RR R PP R R +D
Sbjct: 61 EYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPRVRWKD 105
>sp|Q9GT45|RS26_ANOGA 40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2
Length = 115
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 80/100 (80%), Gaps = 2/100 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRNGGR KH RGHVK +RC+NC +C PK AIK+F++RNIVE AAVRD+ +A VY
Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYS 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQR 98
Y LPKLYAK+ YCVSCAIHS VVR RS+ RRIR PPQR
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQR 100
>sp|O45499|RS26_CAEEL 40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=3
SV=1
Length = 117
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MTFKRRN GRNK RGHV FIRC+NCG+CCPK AIK+F+VRNIVE AAVRD+ +A Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YC++CAIHS VVR RSR RR R PP RF
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRF 101
>sp|P27085|RS26_OCTVU 40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1
Length = 127
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHVK+IRC+NC +C PK AIK+F++RNIVE AAVRD+ +A VY+
Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYE 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFR 100
Y LPKLYAK+ YCVSCAIHS +VR RSR R+ R PP RFR
Sbjct: 61 VYALPKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRFR 102
>sp|Q9UT56|RS26A_SCHPO 40S ribosomal protein S26-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26a PE=3 SV=1
Length = 120
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GRNKHGRGH KF+RC NC + PK AIKR+ +RN+VE AA+RD+ EA VY
Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYS 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRRDD 104
Y +PK+Y K+QYCVSCAIH+ VVRVRSR RRIR PP R R D
Sbjct: 61 EYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPRVRYNRD 106
>sp|P62856|RS26_RAT 40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P49171|RS26_PIG 40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P62855|RS26_MOUSE 40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P61251|RS26_MACFA 40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P62854|RS26_HUMAN 40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|Q56JV1|RS26_BOVIN 40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3
Length = 115
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P21772|RS26_NEUCR 40S ribosomal protein S26E OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-26 PE=3 SV=2
Length = 119
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
M KR+N GRNK GRGHVK IRCSNC +C PK AIKRF +RN+VE AA+RD+ +A V+
Sbjct: 1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFA 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRRDDVPKAGGALG 113
YT+PK+Y K+QYCVSCAIH +VRVRSR RR R PP R R D K G
Sbjct: 61 EYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKDGKKVTPTQG 115
>sp|Q6Q312|RS26_SHEEP 40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3
Length = 115
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P30742|RS26_CRICR 40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3
Length = 115
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR K GRGHV+ IRC+NC +C PK AIK+F++RNIVE AAVRD+ EA V+D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY ++ YCVSCAIHS VVR RSR R+ R PP RF
Sbjct: 61 AYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P39939|RS26B_YEAST 40S ribosomal protein S26-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26B PE=1 SV=1
Length = 119
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
M KR + GRNK GRGHVK +RC NC K PK AIKR +RNIVE AAVRD+ EA VY
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQ--RFRRRDDVPKAGGA 111
Y LPK Y K+ YCVSCAIH+ +VRVRSR +R+ R PPQ RF R + V A A
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRDNKVSPAAAA 115
>sp|P39938|RS26A_YEAST 40S ribosomal protein S26-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26A PE=1 SV=1
Length = 119
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
M KR + GRNK GRGHVK +RC NC K PK AIKR +RNIVE AAVRD+ EA VY
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQ--RFRRRDDVPKAGGA 111
Y LPK Y K+ YCVSCAIH+ +VRVRSR +R+ R PPQ RF R + V A A
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRENKVSPADAA 115
>sp|Q5JNZ5|RS26L_HUMAN Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens
GN=RPS26P11 PE=5 SV=1
Length = 115
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCP--KAIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN K GRGHV+ IRC+NC +C P KAIK+F++RNIVE AAVRD+ E V+D
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRF 99
Y LPKLY K+ YCVSCAIHS VVR RSR + R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRF 101
>sp|Q54TL8|RS26_DICDI 40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3
SV=1
Length = 112
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GR+KHGRG V +IRC+NC +C PK A+KRF +R IVE AAV+D+ + V++
Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFN 60
Query: 59 --GYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQR 98
GY P+ Y K QYC+SCAIHSH+VRVRS +R+IR P R
Sbjct: 61 VKGYKFPRTYVKSQYCISCAIHSHIVRVRSVADRKIRTRPSR 102
>sp|P41959|RS26_BRUPA 40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1
Length = 83
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYD 58
MT KRRN GRNK GRGHV+ IRC+NCG+C PK AIK+F+VRNIV AAVRD+ +A YD
Sbjct: 1 MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYD 60
Query: 59 GYTLPKLYAKMQYCVSCAIHSHV 81
Y LPKLY K+ YCVSCAIHS V
Sbjct: 61 SYALPKLYHKLHYCVSCAIHSKV 83
>sp|Q9BHU1|RS26_OXYNO 40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1
Length = 125
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVY- 57
M KRRN GRNK +GH +RC+NCG+ K AIKRF RN+V+ ++ RD+QE Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 58 -DGYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIR 93
+T+PK+Y K+ YCVSCAIH+ +VRVRS +RR R
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHR 97
>sp|Q8SRN2|RS26_ENCCU 40S ribosomal protein S26 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS26 PE=1 SV=1
Length = 105
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 5 RRNGGRNKHGRGHVKFIRCSNCGKCCPK--AIKRFLVRNIVEQAAVRDVQEACVYDGYTL 62
RRN GR K RG I+C CG PK AIKRF +++++EQA+ D+++A +YD + +
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 63 PKLYAKMQYCVSCAIHSHVVRVRSRTNRRIR 93
P++ K Q+CVSCA H+ +VRVRS R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>sp|P41692|RS26_MUSVI 40S ribosomal protein S26 (Fragment) OS=Mustela vison GN=RPS26
PE=3 SV=3
Length = 41
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 30/40 (75%), Gaps = 2/40 (5%)
Query: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCP--KAIKRFL 38
MT KRRN GR K GRGHV+ IRC+N +C P KAIK+F+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNLARCVPKDKAIKKFV 40
>sp|P0CO12|RNA14_CRYNJ mRNA 3'-end-processing protein RNA14 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RNA14 PE=3 SV=1
Length = 1064
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 85 RSRTNRRIREPPQRFRRRDDVPKAGGALGQGPRAGGPAGAP 125
RS R + PP+R+ RDD P G P P+ P
Sbjct: 920 RSPKRHRAQSPPRRYPERDDRPPPGRYRDSLPPVKAPSSIP 960
>sp|P0CO13|RNA14_CRYNB mRNA 3'-end-processing protein RNA14 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=RNA14
PE=3 SV=1
Length = 1064
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 85 RSRTNRRIREPPQRFRRRDDVPKAGGALGQGPRAGGPAGAP 125
RS R + PP+R+ RDD P G P P+ P
Sbjct: 920 RSPKRHRAQSPPRRYPERDDRPPPGRYRDSLPPVKAPSSIP 960
>sp|Q3IJJ9|RS8_PSEHT 30S ribosomal protein S8 OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=rpsH PE=3 SV=1
Length = 130
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 58 DGYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRRDDVPKAGGALG 113
+G P+L +++Y A+ ++ RV SR RI ++RRD++PK G LG
Sbjct: 52 NGDVKPELSIELKYFEGKAVIENIQRV-SRPGLRI------YKRRDELPKVMGGLG 100
>sp|A7MH59|MNMC_CROS8 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=mnmC PE=3 SV=2
Length = 670
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 51 VQEACVYDGYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRIREPPQRFRRR--DDVPKA 108
+++ YDGY P+ A +C+ + H V +R + E QR R+R D +P A
Sbjct: 496 LRQVLCYDGYLTPQNPANAMHCIGASYHRGVSEMRYQ-----EEDQQRNRQRLIDCLPAA 550
Query: 109 GGA 111
A
Sbjct: 551 SWA 553
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,671,284
Number of Sequences: 539616
Number of extensions: 2001427
Number of successful extensions: 9576
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9506
Number of HSP's gapped (non-prelim): 42
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)