BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032904
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F
PE=2 SV=1
Length = 128
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 114/126 (90%)
Query: 1 MANRPQIRTAASALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFK 60
MA R I SALIAMIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTT++QIEDAFK
Sbjct: 1 MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60
Query: 61 EFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLV 120
EF++R+DIAI+L+SQY+AN IRFLVDS+NKP+PAILEIPSKDHPYDPA DSVLSRVK L
Sbjct: 61 EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120
Query: 121 SVESVA 126
S ESV+
Sbjct: 121 SAESVS 126
>sp|Q23680|VATF_CAEEL Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans
GN=vha-9 PE=3 SV=1
Length = 121
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 91/114 (79%)
Query: 10 AASALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIA 69
A ++A+I DEDTVVGFLL GVG ++ RK NYLIVD +TT+++IE+AF F +R+DIA
Sbjct: 5 AKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIA 64
Query: 70 IVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
I+LI+Q++A IR+ VD+H + IPA+LEIPSK+ PYDP++DS+L+R + L + E
Sbjct: 65 IILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118
>sp|Q55AH5|VATF_DICDI V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF
PE=3 SV=1
Length = 120
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 88/112 (78%)
Query: 10 AASALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIA 69
+ +AL+A+I DED V GFLLAGVG D ++ N+L+VDSKT+ +IE AFK FT+R DIA
Sbjct: 7 SETALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIA 66
Query: 70 IVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
I++I+Q VA+ IR+L+D +++ IP ILEIPSKDHPYDP +DSV+ +VK +
Sbjct: 67 IIMITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTG 118
>sp|P50408|VATF_RAT V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1
SV=1
Length = 119
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 85/114 (74%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+
Sbjct: 5 GKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGII 64
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R K + + E +
Sbjct: 65 LINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
>sp|Q9D1K2|VATF_MOUSE V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2
Length = 119
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 85/114 (74%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+
Sbjct: 5 GKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGII 64
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R K + + E +
Sbjct: 65 LINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
>sp|Q28029|VATF_BOVIN V-type proton ATPase subunit F OS=Bos taurus GN=ATP6V1F PE=3 SV=2
Length = 119
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 85/114 (74%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+
Sbjct: 5 GKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGII 64
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R + + + E +
Sbjct: 65 LINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
>sp|Q16864|VATF_HUMAN V-type proton ATPase subunit F OS=Homo sapiens GN=ATP6V1F PE=1 SV=2
Length = 119
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 85/114 (74%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+
Sbjct: 5 GKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGII 64
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R + + + E +
Sbjct: 65 LINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
>sp|Q17029|VATF_ANOGA V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2
SV=2
Length = 127
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 83/116 (71%)
Query: 14 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLI 73
LI++I DEDT VGFLL GVG ++ R N+++VD T + +IED FK F R+DI I+LI
Sbjct: 11 LISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIKRDDIDIILI 70
Query: 74 SQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESVASDR 129
+Q A IR ++DSH P PA+LEIPSKDHPYD ++DS+L R K + + E + ++R
Sbjct: 71 NQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPEDMIANR 126
>sp|Q1HQK8|VATF_AEDAE V-type proton ATPase subunit F OS=Aedes aegypti GN=AAEL002464 PE=2
SV=1
Length = 127
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 83/116 (71%)
Query: 14 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLI 73
LI++I DEDT VGFLL G+G ++ R N+++VD T + +IED FK F R+DI I+LI
Sbjct: 11 LISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIKRDDIDIILI 70
Query: 74 SQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESVASDR 129
+Q A IR ++D+H P PA+LEIPSKDHPYD ++DS+L R K + + + + ++R
Sbjct: 71 NQNYAEMIRHVIDAHTSPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPDDMVANR 126
>sp|Q24583|VATF1_DROME V-type proton ATPase subunit F 1 OS=Drosophila melanogaster
GN=Vha14-1 PE=1 SV=1
Length = 124
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 81/114 (71%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LI++I DEDT VGFLL GVG ++ R N+++VD T + ++ED FK F R+DI I+
Sbjct: 9 GKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFLKRDDIDII 68
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+Q A IR ++D+H P+PA+LEIPSKDHPYD ++DS+L R + + + E +
Sbjct: 69 LINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPEDL 122
>sp|O44091|VATF1_DROPS V-type proton ATPase subunit F 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Vha14 PE=2 SV=2
Length = 124
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 81/114 (71%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LI++I DEDT VGFLL GVG ++ R N+++VD T + ++ED FK F R+DI I+
Sbjct: 9 GKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTPVSELEDCFKRFLKRDDIDII 68
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+Q A IR ++D+H P+PA+LEIPSKDHPYD ++DS+L R + + + E +
Sbjct: 69 LINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPEDL 122
>sp|P31478|VATF_MANSE V-type proton ATPase subunit F OS=Manduca sexta GN=VHA14 PE=2 SV=1
Length = 124
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 82/114 (71%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
LI++I DEDT VGFLL G+G ++ R N+++VD T + +IE+ FK F R+DI I+
Sbjct: 9 GKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRDDIDII 68
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
LI+Q VA +R ++D+H P+P++LEIPSKDHPYD ++DS+L R K + + E +
Sbjct: 69 LINQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPEDL 122
>sp|Q9I8H3|VATF_XENLA V-type proton ATPase subunit F (Fragment) OS=Xenopus laevis
GN=atp6s14 PE=3 SV=1
Length = 110
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 83/109 (76%)
Query: 17 MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQY 76
+I DEDTV GFLL G+G ++ RK N+L+V+ +T++ +IE+ F+ F +R+DI I+LI+Q+
Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRKPNFLVVEKETSVTEIEETFRSFLNRDDIGIILINQF 60
Query: 77 VANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
+A IR ++D+H IPA+LEIPSK+HPYD +DS+L R K + ++E +
Sbjct: 61 IAEMIRHVIDTHTISIPAVLEIPSKEHPYDATKDSILRRAKGMFTMEDL 109
>sp|A1DH48|VATF_NEOFI V-type proton ATPase subunit F OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=vma7 PE=3
SV=1
Length = 124
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 14 LIAMIADEDTVVGFLLAGVGNV----DLRRKTNYLIVDSKTTIKQIEDAFKEFTS-REDI 68
+A+I DED+V G LLAG+G+V D +R N+L+VDSKT IE AF+ FT R+DI
Sbjct: 13 FLAVIGDEDSVTGLLLAGIGHVTDGPDAQR--NFLVVDSKTETSAIEKAFQNFTQERKDI 70
Query: 69 AIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
A++LI+Q++A RIR VDS P PA+LEIPSKDHPYDP +DSVL RV+ L
Sbjct: 71 AVLLINQHIAERIRHSVDSFADPFPAVLEIPSKDHPYDPEKDSVLKRVRRLFG 123
>sp|Q9Y756|VATF_NEUCR V-type proton ATPase subunit F OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-7 PE=3 SV=1
Length = 124
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
Query: 14 LIAMIADEDTVVGFLLAGVGNVDL--RRKTNYLIVDSKTTIKQIEDAFKEFTS-REDIAI 70
+A+I DED+V G LLAG+G+V + N+L+VD+KT IE AF FT+ R+DI I
Sbjct: 13 FLAVIGDEDSVTGLLLAGIGHVTAPPDSQKNFLVVDNKTDNAAIEAAFDRFTTERKDIGI 72
Query: 71 VLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
VLI+Q++A+RIR VD+H P +LEIPSKDHPYDP +DSVL RV+ L
Sbjct: 73 VLINQHIADRIRHRVDTHTAAFPTVLEIPSKDHPYDPEKDSVLRRVRRLFG 123
>sp|A6RRW0|VATF_BOTFB V-type proton ATPase subunit F OS=Botryotinia fuckeliana (strain
B05.10) GN=vma7 PE=3 SV=1
Length = 124
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 14 LIAMIADEDTVVGFLLAGVGNVDL--RRKTNYLIVDSKTTIKQIEDAFKEFTS-REDIAI 70
+A+I DED+V G LLAG+G+V + N+L+VD+KT IE+AF+ FT+ R+DI I
Sbjct: 13 FLAVIGDEDSVTGLLLAGIGHVTSPPDSQKNFLVVDNKTDNAAIEEAFERFTTERKDIGI 72
Query: 71 VLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
+LI+Q++A RIR VD++ PA+LEIPSKDHPYDP +DSVL RV+ L
Sbjct: 73 LLINQHIAERIRHRVDTYTAAFPALLEIPSKDHPYDPEKDSVLRRVRRLFG 123
>sp|P39111|VATF_YEAST V-type proton ATPase subunit F OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA7 PE=1 SV=1
Length = 118
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 13 ALIAMIADEDTVVGFLLAGVGNV--DLRRKTNYLIVDSKTTIKQIEDAFKEFTS-REDIA 69
LIA+IADEDT G LLAG+G + + + K ++ + KTT ++I D F FT R+DIA
Sbjct: 6 TLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEERDDIA 65
Query: 70 IVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
I+LI+Q++A IR VDS PAILEIPSKDHPYDP +DSVL RV+ L
Sbjct: 66 ILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDPEKDSVLKRVRKLFG 117
>sp|O43046|VATF_SCHPO V-type proton ATPase subunit F OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma7 PE=3 SV=1
Length = 120
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Query: 13 ALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTS-REDIAIV 71
L+++I D+DTV G LLAG G V+ N+ I+ KTT +QI +AF ++T+ R+DIAIV
Sbjct: 10 TLVSVIGDDDTVTGMLLAGTGQVNENGDKNFFIITQKTTDEQIAEAFDDYTTKRKDIAIV 69
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
LI+Q+ A RIR +++H + PA+LEIPSKD PYDP +DS+L RV+ ++
Sbjct: 70 LINQFAAERIRDRIENHVQAFPAVLEIPSKDDPYDPEKDSILRRVRKIIG 119
>sp|A7TMI5|VATF_VANPO V-type proton ATPase subunit F OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=VMA7 PE=3 SV=1
Length = 119
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 13 ALIAMIADEDTVVGFLLAGVGNV--DLRRKTNYLIVDSKTTIKQIEDAFKEFTS-REDIA 69
LIA+I DEDT G LLAG+G + + K ++ D KTT +QI + F +T R+DIA
Sbjct: 7 TLIAVIGDEDTTTGLLLAGIGQITKETNEKNFFIYEDGKTTKEQILNNFINYTQERQDIA 66
Query: 70 IVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
I+LI+Q++A +IR +D++ PAILEIPSKDHPYDP +DSVL RV+ L
Sbjct: 67 ILLINQHIAEKIRSDIDNYTNAFPAILEIPSKDHPYDPEKDSVLKRVRRLFG 118
>sp|Q9VNL3|VATF2_DROME Probable V-type proton ATPase subunit F 2 OS=Drosophila
melanogaster GN=Vha14-2 PE=3 SV=2
Length = 129
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 50 TTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQ 109
TT KQIE+ FK+F R DI I+LI+Q A+ IR VD+HN +P +LEIPSK HPYD ++
Sbjct: 52 TTPKQIEECFKKFLRRPDIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSSR 111
Query: 110 DSVLSRVKNLVS 121
DS+L R + +++
Sbjct: 112 DSILKRAQRVIT 123
>sp|C6A5E9|VATF_THESM V-type ATP synthase subunit F OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=atpF PE=3 SV=1
Length = 102
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
I ++ D+DTV+GF LAGV Y D+ I+++ + E RED+ ++LI+
Sbjct: 3 IVVLGDKDTVLGFRLAGV-------HETYSFEDTTHEIERVRNKIMELIEREDVGVILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A R V+ + P IL+IP K
Sbjct: 56 ERLAQR----VEIPDVAFPIILQIPDK 78
>sp|O06503|VATF_DESSY V-type ATP synthase subunit F OS=Desulfurococcus sp. (strain SY)
GN=atpF PE=3 SV=1
Length = 102
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
IA++ D DT +GF LAG V Y D+ ++++ + KE R D+ I+LI+
Sbjct: 3 IAVLGDRDTALGFKLAGAHEV-------YAFEDTPLEMERLRNKLKELVERGDVGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ A R V+ + IP IL++P K
Sbjct: 56 ERFAQR----VEIPDVTIPIILQVPDK 78
>sp|Q5JIR4|VATF_PYRKO V-type ATP synthase subunit F OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpF PE=3 SV=1
Length = 102
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
IA++ D DTV+GF LAGV Y ++ I+++++ E RED+ I+LI+
Sbjct: 3 IAVLGDSDTVLGFRLAGVHEA-------YAFEETPLDIERLKNKLNELIEREDVGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A + V+ + +P IL++P K
Sbjct: 56 ERLAEK----VEIPDVKLPIILQVPDK 78
>sp|O27037|VATF_METTH V-type ATP synthase subunit F OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=atpF PE=3 SV=1
Length = 106
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 12 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIV 71
S+ IA++ D DTV GF L GV + Y++ T + E+ + R+ +I+
Sbjct: 2 SSNIAVVGDRDTVTGFRLGGV-------REGYVV----ETPDEAEETIRNLI-RDGFSII 49
Query: 72 LISQYVANRIRFLVD--SHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
++++ + + +R ++ + + +P I+EIP K P + D + +K ++ VE V
Sbjct: 50 IVTEKIGDELREFIEETTSSSALPMIIEIPDKTGPSERETDPLRDLIKRVIGVEMV 105
>sp|Q8U4A7|VATF_PYRFU V-type ATP synthase subunit F OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=atpF PE=1 SV=1
Length = 103
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
I ++ D DTVVGF LAGV Y +S ++++ + +E R+D+ I+LI+
Sbjct: 3 IVVMGDSDTVVGFRLAGV-------HEAYEYDESLESVERARNKLRELLERDDVGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A RI L + P IL+IP K
Sbjct: 56 ERLAQRIGSLPEVK---FPIILQIPDK 79
>sp|C5A335|VATF_THEGJ V-type ATP synthase subunit F OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpF PE=3 SV=1
Length = 102
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
IA++ D DT +GF LAG V Y S I++ + KE R+DI I+LI+
Sbjct: 3 IAVMGDPDTALGFKLAGAHEV-------YSFGSSPLEIERANNKLKELVERDDIGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A R V+ P IL+IP K
Sbjct: 56 ETLAQR----VEVPEVEFPIILQIPDK 78
>sp|Q9UXU6|VATF_PYRAB V-type ATP synthase subunit F OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpF PE=3 SV=1
Length = 103
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
+ ++ D DTV GF LAGV Y S+ +I++ + KE R+D+ I+LI+
Sbjct: 3 VVVMGDSDTVTGFRLAGV-------HEAYEFDFSELSIERARNKLKELVERDDVGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A RI D +P IL+IP K
Sbjct: 56 ERLAQRIG---DLPQVNLPIILQIPDK 79
>sp|O57727|VATF_PYRHO V-type ATP synthase subunit F OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=atpF PE=3 SV=1
Length = 103
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
+ ++ D DTVVGF LAG+ Y S+ +I++ + KE R+D+ I+LI+
Sbjct: 3 VVIMGDSDTVVGFRLAGI-------HEAYEFDLSELSIERARNKLKELVERDDVGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +A +I L + +P IL+IP K
Sbjct: 56 ERLAQKIGELPQVN---LPIILQIPDK 79
>sp|Q2NF86|VATF_METST V-type ATP synthase subunit F OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=atpF PE=3 SV=1
Length = 106
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 63/116 (54%), Gaps = 20/116 (17%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLI---VDSKTTIKQIEDAFKEFTSREDIAIV 71
IA++AD DTV GF+L G+ K+ + + ++KTT+KQ+ D ++ +I+
Sbjct: 5 IAIMADPDTVTGFMLGGI-------KSGFPVHNKEEAKTTLKQLVD--------DEYSII 49
Query: 72 LISQYVANRIRFLVDSH--NKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 125
+ ++ + + +R + + +K +P I+E+P K + D + +K ++ VE V
Sbjct: 50 ITTEKIGDELRDDITKYTGSKALPMIIEVPDKSGSHKRETDPMNDLIKRVIGVEMV 105
>sp|B6YV13|VATF_THEON V-type ATP synthase subunit F OS=Thermococcus onnurineus (strain
NA1) GN=atpF PE=3 SV=1
Length = 102
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
IA++ D+DT +GF LAG V Y D+ ++++++ E REDI I+LI+
Sbjct: 3 IAVLGDKDTALGFKLAGAHEV-------YSFEDTPLDMERLKNKLNELVEREDIGIILIT 55
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSK 101
+ +I + P IL++P K
Sbjct: 56 ERFVQKIGL----PDVTFPIILQVPDK 78
>sp|Q6LYE8|VATF_METMP V-type ATP synthase subunit F OS=Methanococcus maripaludis (strain
S2 / LL) GN=atpF PE=3 SV=1
Length = 99
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
I ++ D D V GF LAG+ T+ V+S +Q A +E S +I +++ +
Sbjct: 3 IGVVGDPDVVAGFRLAGL--------TDVYEVNSP---EQAAKAIEELNSNSEIGLIITT 51
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
+ + +IR + S K ++E+P K+ P D V V+N V V+
Sbjct: 52 ERIGEKIRDAISSIKK---VVVEVPDKNGPIVRENDPVKVLVRNAVGVD 97
>sp|A6UT34|VATF_META3 V-type ATP synthase subunit F OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=atpF PE=3 SV=1
Length = 99
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAF---KEFTSREDIAIV 71
IA++ D D +GF LAG+ +V +K EDA +E +R DI ++
Sbjct: 3 IAVVGDLDMTMGFRLAGLEDV--------------YEVKNAEDALNTIRELDNRADIGLI 48
Query: 72 LISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
+ ++ + IR DS + I+EIP K+ D V + V+ V VE
Sbjct: 49 ITTERLGEEIR---DSISNLKKFIVEIPDKNGAIVREHDPVKTLVRKAVGVE 97
>sp|A6UP53|VATF_METVS V-type ATP synthase subunit F OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=atpF PE=3 SV=1
Length = 99
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
I ++ D D VGF LAG+ +V Y + + +Q A +E + +I +++ +
Sbjct: 3 IGVVGDSDVAVGFRLAGLTDV-------YEV----KSPEQASKAIEELDNNAEIGLIITT 51
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
+ + IR + + K I+E+P K+ P +D V V+N V ++
Sbjct: 52 ERIGEGIRETIANAKK---VIVEVPDKNGPIVREKDPVKILVRNAVGID 97
>sp|Q57671|VATF_METJA V-type ATP synthase subunit F OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpF PE=3 SV=1
Length = 98
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
+ ++ D +T +GF LAG+ +V Y + + + +K A E + E+IA ++I+
Sbjct: 3 VGVVGDRETAIGFRLAGLTDV-------YEVKNDEEAVK----AINELANNENIAFIIIT 51
Query: 75 QYVANRIRFLVDSHNKPIPAILEIPSKDHPY---DPAQD 110
+ +A I+ + + NK I+EIP K DP ++
Sbjct: 52 ERIAESIKDKLKNINK---VIVEIPDKHGKLERIDPVKE 87
>sp|O29102|VATF_ARCFU V-type ATP synthase subunit F OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=atpF PE=1 SV=1
Length = 101
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 15 IAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
+A++ D D +GF+LAG+ ++ Y + + +K +ED K R+D+ +V+I
Sbjct: 4 LAVVGDPDFTIGFMLAGISDI-------YEVTSDEEIVKAVEDVLK----RDDVGVVIIK 52
Query: 75 QYVANRIRFLVDSHNKPIPAIL--EIPSKDHP 104
Q + K +P +L EI K P
Sbjct: 53 Q-----------EYLKKLPPVLRREIDEKVEP 73
>sp|B2TP92|VATF_CLOBB V-type ATP synthase subunit F OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=atpF PE=3 SV=1
Length = 103
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 15 IAMIADEDTVVGFLLAG------VGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDI 68
I ++ D+D+V+ F G VGN + ++ + L ++ D
Sbjct: 5 IGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKL-------------------AKNDY 45
Query: 69 AIVLISQYVANRIRFLVDSHNKPI-PAILEIPSKDHPYDPAQDSVLSRVKNLVSV 122
A+V ++++VA I ++ +NK + PA++ IPS + + V+ V V
Sbjct: 46 AVVFVTEHVAQGIEETIERYNKEVLPAVILIPSNQGTLNIGMQRISDNVEKAVGV 100
>sp|B2UWY5|VATF_CLOBA V-type ATP synthase subunit F OS=Clostridium botulinum (strain
Alaska E43 / Type E3) GN=atpF PE=3 SV=1
Length = 103
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 15 IAMIADEDTVVGFLLAG------VGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDI 68
I ++ D+D+V+ F G VGN + ++ + L ++ D
Sbjct: 5 IGVVGDKDSVLAFKALGIDVFPVVGNEEAKKTVDKL-------------------AKNDY 45
Query: 69 AIVLISQYVANRIRFLVDSHNKPI-PAILEIPSKDHPYDPAQDSVLSRVKNLVSV 122
A+V ++++VA I ++ +NK + PA++ IPS + + V+ V V
Sbjct: 46 AVVFVTEHVAQGIEETIERYNKEVLPAVILIPSNQGTLNIGMQRISDNVEKAVGV 100
>sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=NRPS14 PE=2 SV=2
Length = 4007
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 QIRTAASALIAMIADEDTVVGFL--LAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFT 63
++R +S IAM+A E V L + DL+ Y ++ E +F +
Sbjct: 3302 ELRNCSSWRIAMVAGEAFTVHLLDQFRALNRPDLKVINAYGPTEASICSSLGEVSFNRIS 3361
Query: 64 SREDIAIVLISQYVANRIRFLVDSHNKPIP 93
S E + I + + N ++VD H KP+P
Sbjct: 3362 SSE--TSIPIGKAIPNYGTYIVDQHCKPVP 3389
>sp|A4XZR8|BIOF_PSEMY 8-amino-7-oxononanoate synthase OS=Pseudomonas mendocina (strain
ymp) GN=bioF PE=3 SV=1
Length = 389
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 5 PQIRTAASALIAM-------IADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIED 57
PQ+R L+A +A+ V+ L G + ++L++ T ++E+
Sbjct: 30 PQVRADDQELLAFCSNDYLGLANHPEVIRALQLGAEKWGVGGGASHLVIGHSTPHHELEE 89
Query: 58 AFKEFTSREDIAIVLISQYVAN 79
A EFT R A++ + Y+AN
Sbjct: 90 ALAEFTGRPR-ALLFSTGYMAN 110
>sp|B7H6Q5|Y4020_BACC4 UPF0747 protein BCB4264_A4020 OS=Bacillus cereus (strain B4264)
GN=BCB4264_A4020 PE=3 SV=1
Length = 538
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 48 SKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIP 99
+K +K ++DA K+ + D LI++ AN LVDSH+ P LEIP
Sbjct: 192 TKDVLKFVDDALKKSNTYVDFFAHLITKIFANSGLILVDSHH-PELRKLEIP 242
>sp|Q812W2|Y3919_BACCR UPF0747 protein BC_3919 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=BC_3919 PE=3 SV=1
Length = 538
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 48 SKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIP 99
+K +K ++DA K+ + D LI++ AN LVDSH+ P LEIP
Sbjct: 192 TKDVLKFVDDALKKSNTYVDFFAHLITKIFANSGLILVDSHH-PELRKLEIP 242
>sp|B1VKF0|ACCD_CRYJA Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta,
chloroplastic OS=Cryptomeria japonica GN=accD PE=3 SV=1
Length = 700
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 13 ALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVL 72
AL ++A +T+V L +G+ + YL +DSK TIK ++D A+
Sbjct: 131 ALRILVAYNNTLVNILKVALGS----KFIKYLNLDSKETIKILQDIIDTGLKTAQFALFE 186
Query: 73 ISQYVANRI-RFLVDS---HNKPIPAILEIPSKDHPYDPAQ------DSVLSRVKNLVSV 122
I + + N RF + + NK I ++L +D D ++ D + RV+ + +
Sbjct: 187 IRKKIKNEFYRFALLNKAFENKQISSLLAQNLEDRRDDESEIISIEFDRMAFRVQTFLIL 246
Query: 123 ESV 125
ES+
Sbjct: 247 ESL 249
>sp|Q8RXS6|INO80_ARATH DNA helicase INO80 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2
Length = 1507
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 39 RKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLIS 74
RK YL +D +TI D ++F R DI + L+S
Sbjct: 1245 RKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLS 1280
>sp|P75457|END4_MYCPN Probable endonuclease 4 OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=nfo PE=1 SV=1
Length = 286
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 79 NRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVK 117
N +RF+ K IP +LE PS H Y + + R++
Sbjct: 242 NLMRFIAQPQIKQIPIVLETPSDKHNYPAVYGAEIERIR 280
>sp|A4FXD5|VATF_METM5 V-type ATP synthase subunit F OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=atpF PE=3 SV=1
Length = 99
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 27 FLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVD 86
F LAG+ +V Y + + K IE E S +I +++ ++ + ++R +
Sbjct: 15 FRLAGLTDV-------YEVKSPEQAAKAIE----ELNSNSEIGLIITTERIGEQVRDTIS 63
Query: 87 SHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
+ K ++E+P K+ P D V V+N V V+
Sbjct: 64 AVKK---VVVEVPDKNGPIVRENDPVKVLVRNAVGVD 97
>sp|A6VFZ1|VATF_METM7 V-type ATP synthase subunit F OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=atpF PE=3 SV=1
Length = 99
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 27 FLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVD 86
F LAG+ +V Y + + K IE E S +I +++ ++ + IR +
Sbjct: 15 FRLAGLTDV-------YEVKSPEQAAKAIE----ELNSNSEIGLIITTERIGEEIRDTIS 63
Query: 87 SHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 123
K ++E+P K+ P D V V+N V V+
Sbjct: 64 GVKK---VVVEVPDKNGPIVRENDPVKVLVRNAVGVD 97
>sp|Q04368|CSI1_YEAST Cop9 signalosome-interactor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CSI1 PE=1 SV=1
Length = 295
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 73 ISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVS 121
I +Y N IR L++ N+ I + + D P+ QD +L ++ LV+
Sbjct: 208 IQKYNNNTIRKLLEKINRMIIFLKNYDATDKPFSSTQDVILRKISMLVT 256
>sp|Q6R7B3|Y002_OSHVF Uncharacterized protein ORF2 OS=Ostreid herpesvirus 1 (isolate
France) GN=ORF2 PE=4 SV=1
Length = 167
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 21 EDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSR 65
ED VV L+ +VDL RK Y+++ SK + D ++F R
Sbjct: 35 EDRVVRALMED--DVDLWRKMKYMVISSKNNDDKTMDTMRKFCER 77
>sp|B7IVF4|Y1221_BACC2 UPF0747 protein BCG9842_B1221 OS=Bacillus cereus (strain G9842)
GN=BCG9842_B1221 PE=3 SV=1
Length = 538
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 48 SKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIP 99
+K +K ++DA ++ + D LI++ AN LVDSH+ P LEIP
Sbjct: 192 TKDVLKFVDDALEKSNTYVDFFAHLITKIFANSGLILVDSHH-PELRKLEIP 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,588,136
Number of Sequences: 539616
Number of extensions: 1411238
Number of successful extensions: 4767
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 4712
Number of HSP's gapped (non-prelim): 60
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)