Your job contains 1 sequence.
>032906
MMPLAAQFLLRIPQLGRKNINFPSYKHRGNYQPLFLSCNYSTNDNCSSSSSSRNYLELTD
DELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALSHSF
GPQSEEQCES
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032906
(130 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 243 5.4e-23 2
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 164 1.3e-11 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 158 1.3e-11 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 158 1.3e-11 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 163 1.7e-11 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 162 2.2e-11 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 161 2.8e-11 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 160 3.5e-11 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 156 9.6e-11 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 156 9.6e-11 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 156 9.7e-11 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 156 1.0e-10 1
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 155 1.2e-10 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 155 1.4e-10 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 154 1.6e-10 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 154 1.6e-10 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 150 4.6e-10 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 149 6.1e-10 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 148 1.0e-09 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 146 1.2e-09 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 146 1.2e-09 1
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 148 1.3e-09 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 144 2.6e-09 1
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 143 3.4e-09 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 131 4.6e-09 2
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 141 4.6e-09 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 142 4.7e-09 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 130 5.9e-09 2
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 139 7.5e-09 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 138 1.2e-08 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 131 1.7e-08 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 136 1.8e-08 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 128 2.0e-08 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 134 2.4e-08 1
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 134 3.0e-08 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 133 3.2e-08 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 133 3.2e-08 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 132 5.4e-08 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 131 5.6e-08 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 131 5.9e-08 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 132 6.1e-08 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 132 6.6e-08 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 130 7.3e-08 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 130 7.3e-08 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 129 8.3e-08 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 129 8.5e-08 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 130 9.9e-08 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 124 1.1e-07 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 128 1.2e-07 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 129 1.3e-07 1
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 127 1.6e-07 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 127 1.6e-07 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 126 1.7e-07 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 127 1.7e-07 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 124 3.4e-07 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 122 5.0e-07 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 120 8.7e-07 1
UNIPROTKB|F1NSN8 - symbol:F1NSN8 "Uncharacterized protein... 109 2.1e-06 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 116 2.2e-06 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 107 3.4e-06 1
UNIPROTKB|F1MLX1 - symbol:C17H12orf65 "Uncharacterized pr... 107 3.4e-06 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 115 4.3e-06 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 105 5.5e-06 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 105 5.5e-06 1
SGD|S000004271 - symbol:YLR281C "Putative protein of unkn... 105 5.5e-06 1
UNIPROTKB|F1RFL3 - symbol:C12orf65 "Uncharacterized prote... 106 5.6e-06 1
UNIPROTKB|F1M2Z8 - symbol:RGD1563482 "Protein RGD1563482"... 105 6.6e-06 1
UNIPROTKB|F5H4X5 - symbol:C12orf65 "Probable peptide chai... 104 7.0e-06 1
UNIPROTKB|Q9H3J6 - symbol:C12orf65 "Probable peptide chai... 104 7.0e-06 1
MGI|MGI:1919900 - symbol:2810006K23Rik "RIKEN cDNA 281000... 104 9.1e-06 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 111 9.1e-06 1
POMBASE|SPBC1105.18c - symbol:SPBC1105.18c "peptide relea... 100 1.9e-05 1
UNIPROTKB|E2QXR1 - symbol:C12orf65 "Uncharacterized prote... 104 2.1e-05 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 103 4.4e-05 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 103 4.4e-05 1
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 105 4.6e-05 1
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 100 0.00012 1
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 100 0.00012 1
UNIPROTKB|F5GWJ6 - symbol:C12orf65 "Probable peptide chai... 88 0.00035 1
UNIPROTKB|F1LWN5 - symbol:RGD1563482 "Protein RGD1563482"... 88 0.00035 1
FB|FBgn0050100 - symbol:CG30100 species:7227 "Drosophila ... 87 0.00045 1
WB|WBGene00011941 - symbol:T23B5.4 species:6239 "Caenorha... 85 0.00072 1
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 243 (90.6 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 42/62 (67%), Positives = 55/62 (88%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L+ TD+EL ++C ++ ++ SGPGGQHRNKR+SAVRLKH+PTG++A A EDRSQHKNRASA
Sbjct: 87 LKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASA 146
Query: 116 LS 117
L+
Sbjct: 147 LN 148
Score = 37 (18.1 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 MMPLAAQFLLRIPQLGRKNI---NFPS---YKHR 28
+M +AA F R P L R++I + P+ Y HR
Sbjct: 3 IMAVAALFHARFPLLLRRSIPLLSAPTSVIYNHR 36
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
+ ++D +++SG GGQH NK +SA+R+ H+PTGV+ E RSQHKNRA A+S
Sbjct: 223 DLKVDTFRASGAGGQHVNKTDSAIRITHIPTGVVVECQEQRSQHKNRAQAMS 274
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+T D + +++ Y++SGPGGQHRN +SAVR++H+PTG++ A+E RSQ +NR A+
Sbjct: 1 MTVDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAM 59
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+T D + +++ Y++SGPGGQHRN +SAVR++H+PTG++ A+E RSQ +NR A+
Sbjct: 1 MTVDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAM 59
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 163 (62.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
+ ++D ++SSG GGQH NK +SA+R+ H+PTG++ + RSQHKNRA A+S
Sbjct: 223 DLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMS 274
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 162 (62.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 57 ELTDD-ELF---RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNR 112
EL DD E+ ++ +D Y++SG GGQH NK ESAVR+ H PTG++ DRSQHKN+
Sbjct: 224 ELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNK 283
Query: 113 ASA 115
A+A
Sbjct: 284 ATA 286
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D Y+SSGPGGQ N +SAVR+ H+PTG++ + +++SQHKNRA A+
Sbjct: 221 KDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAM 272
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 160 (61.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
++L DE ++ +D Y+SSGPGGQ N +SAVR+ H+PTG++ + +++SQHKN++ A
Sbjct: 213 VDLKIDE--KDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKA 270
Query: 116 L 116
L
Sbjct: 271 L 271
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 156 (60.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 27/61 (44%), Positives = 45/61 (73%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
++L DE ++ +D Y+SSGPGGQ N +SAVR+ H+P+G++ + +++SQHKN++ A
Sbjct: 213 VDLKIDE--KDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKA 270
Query: 116 L 116
L
Sbjct: 271 L 271
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 156 (60.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 57 ELTDDELF----RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNR 112
EL D EL + +D ++SSG GGQH N +SA+R+ H+PTG++ ++RSQHKN+
Sbjct: 208 ELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNK 267
Query: 113 ASALS 117
A ALS
Sbjct: 268 AKALS 272
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 156 (60.0 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
E +D +++SG GGQH N+ +SA+R+ H+PTGV+ ++RSQHKN+A A+S
Sbjct: 223 ELRIDTFRASGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMS 274
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D Y++SG GGQH N+ ESAVR+ H+PTG++ DRSQHKN+ A+
Sbjct: 238 DLRIDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAM 288
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ ++D Y++SG GGQH NK ESAVR+ H+PTG++ ++RSQ KNRA A+
Sbjct: 216 DLKIDVYRASGAGGQHVNKTESAVRITHIPTGIVVECQDERSQIKNRAKAM 266
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 63 LFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
L ++ +D Y++SG GGQH NK ESAVR+ H+P+G++ RSQH+NRA A S
Sbjct: 236 LEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYS 290
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 154 (59.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
+ ++D ++SSG GGQH N +SA+R+ H+PTG++ ++RSQHKN+A A+S
Sbjct: 223 DLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMS 274
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 154 (59.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
+ ++D ++SSG GGQH N +SA+R+ H+PTG++ ++RSQHKN+A A+S
Sbjct: 223 DLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMS 274
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 150 (57.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 57 ELTDDELF-RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
E T+ E+ ++ +D Y++SG GGQH NK ESAVR+ H+P+G++ +RSQH+N A A
Sbjct: 228 EDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEA 287
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 149 (57.5 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 57 ELTDD-EL-FRECEM--DAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNR 112
E+ DD E+ E ++ D Y+SSG GGQH N +SAVRL H+PTG++ +RSQH N+
Sbjct: 223 EIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPTGIVVACQCERSQHLNK 282
Query: 113 ASAL 116
A+AL
Sbjct: 283 ATAL 286
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 148 (57.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ + +SSG GGQH NK ESAVR+ H+PTG+ L++ +RSQH+N+++ L
Sbjct: 293 KDLHFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGL 344
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D + +SG GGQH NK ESAVR+ H+PTG++ +++SQHKN+ A+
Sbjct: 219 DLRIDVFCASGAGGQHVNKTESAVRITHIPTGIVVTCQDEKSQHKNKERAM 269
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 25/61 (40%), Positives = 44/61 (72%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+ ++ DE ++ ++D Y++SG GGQH NK ESA+R+ H+P+ ++ + RSQH+N+A A
Sbjct: 229 INISIDE--KDLKIDTYRASGAGGQHVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEA 286
Query: 116 L 116
+
Sbjct: 287 M 287
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 148 (57.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+E+ D +L ++ ++S G GGQH N +SAVR+ H+PTG+ A +RSQH N+ASA
Sbjct: 341 VEINDSDL----RIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASA 396
Query: 116 LS 117
++
Sbjct: 397 MA 398
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
E +D ++SG GGQH N +SAVRL H+P+G++ ++RSQHKN+A A +
Sbjct: 273 EIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFT 324
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 143 (55.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D Y+S G GGQH N SAVR+ H+PTG++ ++RSQH NRA AL
Sbjct: 273 DLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKAL 323
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 131 (51.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D +++ G GGQH N +SAVRL HVPTG++ ++RSQ KN+ AL
Sbjct: 299 KDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEIAL 350
Score = 32 (16.3 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 21 NFPSYKH 27
N+ SYKH
Sbjct: 214 NYSSYKH 220
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 141 (54.7 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D Y+SSG GGQH N +SAVR+ H+PTG++ ++E +SQH+NR A+
Sbjct: 236 DIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTSSE-KSQHQNRDIAM 285
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 142 (55.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
R+ ++D Y+SSG GGQ N +SAVR+ H+PTG+ ++RSQH+NR+ A+
Sbjct: 292 RDLKVDIYRSSGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNRSKAM 343
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 130 (50.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D +++ G GGQH N +SAVRL H+PTG++ ++RSQ KN+ AL
Sbjct: 300 KDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIAL 351
Score = 32 (16.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 21 NFPSYKH 27
N+ SYKH
Sbjct: 215 NYSSYKH 221
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 139 (54.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+EL ++EL +++ ++S G GGQH NK ESAVR+ H+PTG+ + +RSQ NRA A
Sbjct: 231 IELKEEEL----KIETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQNERSQLMNRALA 286
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+E + ++SG GGQH NK ESA+RL H+PTG++ + RSQH NR A
Sbjct: 268 QEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKA 318
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 131 (51.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++S G GGQH N +SAVRL H+PTG ++ + RSQ KNR +AL
Sbjct: 92 KDLRIDTFRSRGAGGQHVNTTDSAVRLVHLPTGTVSECQQFRSQLKNRETAL 143
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 136 (52.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 58 LTDDE-LFR--ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRAS 114
L DDE +F E +D ++ G GGQH N +SAVRL H+PTG+I + ++RSQ N+A
Sbjct: 256 LKDDERVFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAK 315
Query: 115 ALS 117
A +
Sbjct: 316 AFA 318
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
++ +D ++SG GGQH N +SAVR+ H+PTGV++ ++RSQ KN+ A++
Sbjct: 101 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMT 153
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 134 (52.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ ++D +SSG GGQ N +SAVR+ H+PTG++ + + +SQHKN+ SA+
Sbjct: 217 DLKVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAM 267
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 134 (52.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
E +++ +S G GGQH N+ ESAVRL H+PTG+ + RSQH+N+ A
Sbjct: 256 EVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNKEKA 305
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 133 (51.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ ++D ++SSGPGGQ+ K +AVR+ H+P+G++ + +RSQH+NR A+
Sbjct: 230 DIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAM 280
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 133 (51.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ ++D ++SSGPGGQ+ K +AVR+ H+P+G++ + +RSQH+NR A+
Sbjct: 230 DIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAM 280
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 132 (51.5 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D +++ G GGQH NK +SAVR+ H+PTGV+ ++RSQ N+ AL
Sbjct: 267 KDLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEIAL 318
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 131 (51.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D Y+SSGPGGQ N +SAVRL H+P+G++ ++SQ +N+ +A+
Sbjct: 239 DVRVDVYRSSGPGGQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAM 289
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 131 (51.2 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++SG GGQH N +SAVR+ H+PTGV++ ++RSQ KNR A+
Sbjct: 237 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAM 288
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 132 (51.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
++ +D +++ G GGQH NK +SAVRL H+PTG++ ++RSQ KN+ A
Sbjct: 298 KDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIA 348
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 132 (51.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
++ +D +++ G GGQH NK +SAVRL H+PTG++ ++RSQ KN+ A
Sbjct: 311 KDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIA 361
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 130 (50.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++SG GGQH N +SAVR+ H+PTG+I+ ++RSQ KNR A+
Sbjct: 230 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAM 281
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 130 (50.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++SG GGQH N +SAVR+ H+PTG+I+ ++RSQ KNR A+
Sbjct: 230 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAM 281
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 129 (50.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D +SSG GGQH N +SAVR+ H+P+G++ ++E +SQH+NR A+
Sbjct: 215 DIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSSE-KSQHRNREIAM 264
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 129 (50.5 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D + SSGPGGQ N SAVRL H+PTGV+ +++SQ KN+ A+
Sbjct: 218 KDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAM 269
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 130 (50.8 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D +++ G GGQH N +SAVRL H+PTG++ ++RSQ KN+ AL
Sbjct: 297 KDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIAL 348
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ + ++SG GGQH N +SAVR+ H+PTGV++ ++RSQ KNR A+
Sbjct: 95 KDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAM 146
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
++ +D ++SG GGQH N +SAVR+ H+PTGV++ ++RSQ KN+ A++
Sbjct: 237 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMT 289
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D +++ G GGQH N +SAVRL H+PTG++ ++RSQ KN+ AL
Sbjct: 299 KDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIAL 350
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++SG GGQH N +SAVR+ H+PTG+++ ++RSQ KN+ A+
Sbjct: 237 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAM 288
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +D ++SG GGQH N +SAVR+ H+PTG+++ ++RSQ KN+ A+
Sbjct: 237 KDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAM 288
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 126 (49.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ +++ ++SG GGQH N +SAVR+ H+PTG +A ++RSQ KN+ +A+
Sbjct: 196 KDLKIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAM 247
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALSHSFGPQS 124
++ +++ ++SG GGQH N +SAVR+ H+PTG+ A +RSQ KNR A+
Sbjct: 239 KDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLV 298
Query: 125 EEQCES 130
++Q ES
Sbjct: 299 QQQLES 304
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 124 (48.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ + ++SG GGQH N +SAVR+ H+PTGV++ ++RSQ KNR A+
Sbjct: 238 KDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAM 289
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 122 (48.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
+ +D ++SSG GGQ N +SAVR+ H+PTG++ +RSQ +N+ AL
Sbjct: 222 DLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRAL 272
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 120 (47.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ ++ ++SG GGQH N +SAVR+ H+PTGV + ++RSQ +N+ A+
Sbjct: 223 KDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAM 274
>UNIPROTKB|F1NSN8 [details] [associations]
symbol:F1NSN8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:AADN02034888 EMBL:AADN02034889
EMBL:AADN02034890 EMBL:AADN02034891 EMBL:AADN02034892
IPI:IPI00587441 Ensembl:ENSGALT00000005399 Uniprot:F1NSN8
Length = 141
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+ELT+ EL +E + GPGGQ NK + V LKHVP+G++ + RS KNR A
Sbjct: 30 VELTEAEL-KE---QFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIA 85
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 116 (45.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALS 117
+ +D + SSG GGQ+ K +A+RL H+PTG++ ++RSQ KN+ A +
Sbjct: 219 DVRVDIFHSSGAGGQNVQKVATAIRLTHIPTGLVVCCQDERSQLKNKNKAFA 270
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 76 GPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
GPGGQ NK S V+L H+PTG++ RSQ +NRA A
Sbjct: 50 GPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIA 89
>UNIPROTKB|F1MLX1 [details] [associations]
symbol:C17H12orf65 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:DAAA02045238 IPI:IPI00704175
Ensembl:ENSBTAT00000027321 Uniprot:F1MLX1
Length = 173
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L+ DE RE E K GPGGQ NK + V L+HVP+G++ + RS +NR A
Sbjct: 54 LSLDE--RELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLA 109
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 115 (45.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+E+ +++L ++ ++ G GGQ+ NK E+AVR+ H+PTGV E+RSQ N+ A
Sbjct: 312 IEIPEEDL----DISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRA 367
Query: 116 L 116
L
Sbjct: 368 L 368
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 73 KSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNR 112
+SSG GGQH NK + V+++H PTG+ +DRSQ NR
Sbjct: 36 RSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNR 75
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 73 KSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNR 112
+SSG GGQH NK + V+++H PTG+ +DRSQ NR
Sbjct: 36 RSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNR 75
>SGD|S000004271 [details] [associations]
symbol:YLR281C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0006415 "translational
termination" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 SGD:S000004271
GO:GO:0005739 Gene3D:3.30.160.20 EMBL:BK006945 EMBL:U17243
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812
GeneTree:ENSGT00390000012759 EMBL:AY557931 PIR:S50367
RefSeq:NP_013383.1 ProteinModelPortal:Q05863 SMR:Q05863
DIP:DIP-2590N STRING:Q05863 EnsemblFungi:YLR281C GeneID:850987
KEGG:sce:YLR281C CYGD:YLR281c OMA:KHERARA OrthoDB:EOG4WHCWF
NextBio:967507 Genevestigator:Q05863 GermOnline:YLR281C
Uniprot:Q05863
Length = 155
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 62 ELFREC-EMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
E+ +C E + GPGGQ NK S V+L+H PTG++ E RS+ +NR A
Sbjct: 32 EMEAQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLA 86
>UNIPROTKB|F1RFL3 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:CU462966
Ensembl:ENSSSCT00000010716 Uniprot:F1RFL3
Length = 187
Score = 106 (42.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L+ DE RE E K GPGGQ NK + V L+H+P+G++ + RS +NR A
Sbjct: 56 LSLDE--RELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLA 111
>UNIPROTKB|F1M2Z8 [details] [associations]
symbol:RGD1563482 "Protein RGD1563482" species:10116
"Rattus norvegicus" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 RGD:1563482 IPI:IPI00370893
Ensembl:ENSRNOT00000001421 ArrayExpress:F1M2Z8 Uniprot:F1M2Z8
Length = 183
Score = 105 (42.0 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
E E K GPGGQ NK + V LKHVP+G++ + RS +NR A
Sbjct: 61 ELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKMA 110
>UNIPROTKB|F5H4X5 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 HGNC:HGNC:26784
EMBL:AC073857 EMBL:AC068768 IPI:IPI01014644 Ensembl:ENST00000543139
ArrayExpress:F5H4X5 Bgee:F5H4X5 Uniprot:F5H4X5
Length = 138
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L+ DE E E K GPGGQ NK + V LKH+P+G++ + RS +NR A
Sbjct: 53 LSLDE--NELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
>UNIPROTKB|Q9H3J6 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=NAS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
EMBL:CH471054 eggNOG:COG1186 GO:GO:0003747 EMBL:AF061733
EMBL:AK095982 EMBL:BC018145 EMBL:BC020885 EMBL:BC062329
IPI:IPI00019211 IPI:IPI00382906 RefSeq:NP_001137377.1
RefSeq:NP_001181924.1 RefSeq:NP_689482.1 UniGene:Hs.319128
ProteinModelPortal:Q9H3J6 SMR:Q9H3J6 IntAct:Q9H3J6 STRING:Q9H3J6
PhosphoSite:Q9H3J6 DMDM:74733574 PRIDE:Q9H3J6 DNASU:91574
Ensembl:ENST00000253233 Ensembl:ENST00000366329
Ensembl:ENST00000429587 GeneID:91574 KEGG:hsa:91574 UCSC:uc001uen.3
CTD:91574 GeneCards:GC12P123717 HGNC:HGNC:26784 HPA:HPA038194
MIM:613541 MIM:613559 neXtProt:NX_Q9H3J6 Orphanet:254930
Orphanet:70474 PharmGKB:PA162377963 HOGENOM:HOG000217812
HOVERGEN:HBG094928 InParanoid:Q9H3J6 OMA:WESSKNV OrthoDB:EOG4T784Q
PhylomeDB:Q9H3J6 GenomeRNAi:91574 NextBio:77303 ArrayExpress:Q9H3J6
Bgee:Q9H3J6 CleanEx:HS_C12orf65 Genevestigator:Q9H3J6
Uniprot:Q9H3J6
Length = 166
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L+ DE E E K GPGGQ NK + V LKH+P+G++ + RS +NR A
Sbjct: 53 LSLDE--NELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 108
>MGI|MGI:1919900 [details] [associations]
symbol:2810006K23Rik "RIKEN cDNA 2810006K23 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 MGI:MGI:1919900
GO:GO:0005739 Gene3D:3.30.160.20 eggNOG:COG1186 GO:GO:0003747
HOGENOM:HOG000217812 HOVERGEN:HBG094928 OrthoDB:EOG4T784Q
EMBL:AK012682 EMBL:AK039255 EMBL:AK140664 EMBL:BC046909
IPI:IPI00465979 IPI:IPI00856726 RefSeq:NP_001128189.1
RefSeq:NP_082586.1 UniGene:Mm.121658 PDB:2RSM PDBsum:2RSM
ProteinModelPortal:Q80VP5 SMR:Q80VP5 STRING:Q80VP5 PaxDb:Q80VP5
PRIDE:Q80VP5 Ensembl:ENSMUST00000077376 Ensembl:ENSMUST00000111477
GeneID:72650 KEGG:mmu:72650 UCSC:uc008zpm.1 UCSC:uc008zpn.1
GeneTree:ENSGT00390000012759 InParanoid:Q80VP5 OMA:ELMSSEA
NextBio:336653 Bgee:Q80VP5 CleanEx:MM_2810006K23RIK
Genevestigator:Q80VP5 Uniprot:Q80VP5
Length = 184
Score = 104 (41.7 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
E E K GPGGQ NK + V LKHVP+G++ + RS +NR A
Sbjct: 62 ELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKIA 111
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 68 EMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKN 111
+++A ++SGPGGQ+ NKR +AVR+ H TG+ ++R QH N
Sbjct: 247 KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLN 290
>POMBASE|SPBC1105.18c [details] [associations]
symbol:SPBC1105.18c "peptide release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006415 "translational
termination" evidence=IC] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
PomBase:SPBC1105.18c GO:GO:0005739 EMBL:CU329671 Gene3D:3.30.160.20
GO:GO:0032543 eggNOG:COG1186 GO:GO:0004045 GO:GO:0003747
GO:GO:0006415 OrthoDB:EOG4WHCWF RefSeq:NP_596474.2
ProteinModelPortal:Q9Y811 STRING:Q9Y811 EnsemblFungi:SPBC1105.18c.1
GeneID:2539814 KEGG:spo:SPBC1105.18c NextBio:20800963
Uniprot:Q9Y811
Length = 162
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 76 GPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
GPGGQ NK ++KH+PTG+I + + RS+ +NR A
Sbjct: 61 GPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIA 100
>UNIPROTKB|E2QXR1 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 OMA:ELMSSEA EMBL:AAEX03014643
Ensembl:ENSCAFT00000012030 Uniprot:E2QXR1
Length = 239
Score = 104 (41.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 56 LELTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
L L D+ E E K GPGGQ NK + V LKH+P+G++ + RS +NR A
Sbjct: 125 LPLLDES---ELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLA 181
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 103 (41.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ ++ ++SS PGGQ+ NK ES V + H PTG+ E+R+Q N+ A+
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAM 232
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 103 (41.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASAL 116
++ ++ ++SS PGGQ+ NK ES V + H PTG+ E+R+Q N+ A+
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAM 232
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 105 (42.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 65 RECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
++ E+ + +S G GGQ+ NK E+A+ L H P+G+ E+R+Q +N+A A
Sbjct: 275 KDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARA 325
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 73 KSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALSHSF 120
+S G GGQ+ NK E+AVR+ H PT + A+ +R+Q N+ +AL +
Sbjct: 232 RSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIY 279
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 73 KSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASALSHSF 120
+S G GGQ+ NK E+AVR+ H PT + A+ +R+Q N+ +AL +
Sbjct: 232 RSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKRIY 279
>UNIPROTKB|F5GWJ6 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 HGNC:HGNC:26784
EMBL:AC073857 EMBL:AC068768 IPI:IPI01018612 Ensembl:ENST00000546132
ArrayExpress:F5GWJ6 Bgee:F5GWJ6 Uniprot:F5GWJ6
Length = 96
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 58 LTDDELFRECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVI 99
L+ DE E E K GPGGQ NK + V LKH+P+G++
Sbjct: 53 LSLDE--NELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIV 92
>UNIPROTKB|F1LWN5 [details] [associations]
symbol:RGD1563482 "Protein RGD1563482" species:10116
"Rattus norvegicus" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
IPI:IPI00388532 Ensembl:ENSRNOT00000030251 RGD:1563482
ArrayExpress:F1LWN5 Uniprot:F1LWN5
Length = 127
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 66 ECEMDAYKSSGPGGQHRNKRESAVRLKHVPTGVI 99
E E K GPGGQ NK + V LKHVP+G++
Sbjct: 61 ELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIV 94
>FB|FBgn0050100 [details] [associations]
symbol:CG30100 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720 EMBL:AE013599
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:BT030757 RefSeq:NP_725560.1
UniGene:Dm.38081 SMR:A1ZAD7 STRING:A1ZAD7
EnsemblMetazoa:FBtr0087140 GeneID:246457 KEGG:dme:Dmel_CG30100
UCSC:CG30100-RA FlyBase:FBgn0050100 eggNOG:NOG295143
InParanoid:A1ZAD7 OMA:CHTHRLA OrthoDB:EOG4JH9Z9 NextBio:842552
Uniprot:A1ZAD7
Length = 146
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 73 KSSGPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKNRASA 115
+ SGPGGQ NK + V L+H+PT + R KNR A
Sbjct: 41 RGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEA 83
>WB|WBGene00011941 [details] [associations]
symbol:T23B5.4 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:Z93390 RefSeq:NP_001255660.1
ProteinModelPortal:E5QCJ3 SMR:E5QCJ3 EnsemblMetazoa:T23B5.4b
GeneID:3565854 KEGG:cel:CELE_T23B5.4 CTD:3565854 WormBase:T23B5.4b
OMA:AVQLTHL Uniprot:E5QCJ3
Length = 149
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 76 GPGGQHRNKRESAVRLKHVPTGVIALAAEDRSQHKN 111
GPGGQ N ++AV+L H+PTG + E R KN
Sbjct: 57 GPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKN 92
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 130 111 0.00091 102 3 11 22 0.47 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 537 (57 KB)
Total size of DFA: 117 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.56u 0.10s 10.66t Elapsed: 00:00:00
Total cpu time: 10.56u 0.10s 10.66t Elapsed: 00:00:00
Start: Fri May 10 07:38:25 2013 End: Fri May 10 07:38:25 2013