BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032918
MNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPVARFI
LFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYCLGVAFL
FFFTVLYLCS

High Scoring Gene Products

Symbol, full name Information P value
AT4G37220 protein from Arabidopsis thaliana 2.0e-17
COR413-PM1
AT2G15970
protein from Arabidopsis thaliana 1.4e-16
COR413-PM2
AT3G50830
protein from Arabidopsis thaliana 7.7e-16
AT2G23680 protein from Arabidopsis thaliana 4.5e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032918
        (130 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115010 - symbol:AT4G37220 "AT4G37220" species...   213  2.0e-17   1
TAIR|locus:2044641 - symbol:COR413-PM1 "AT2G15970" specie...   205  1.4e-16   1
TAIR|locus:2077982 - symbol:COR413-PM2 "AT3G50830" specie...   198  7.7e-16   1
TAIR|locus:2049003 - symbol:AT2G23680 "AT2G23680" species...   153  4.5e-11   1


>TAIR|locus:2115010 [details] [associations]
            symbol:AT4G37220 "AT4G37220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0009744 "response to sucrose
            stimulus" evidence=IEP;RCA] [GO:0009749 "response to glucose
            stimulus" evidence=IEP] [GO:0009750 "response to fructose stimulus"
            evidence=IEP;RCA] GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009750 GO:GO:0009749 GO:GO:0009744
            EMBL:AL161591 EMBL:Z99707 InterPro:IPR008892 Pfam:PF05562
            HOGENOM:HOG000239742 ProtClustDB:CLSN2717102 EMBL:AK117399
            EMBL:BT005584 IPI:IPI00542006 PIR:G85439 RefSeq:NP_195439.1
            UniGene:At.31263 STRING:O23164 GeneID:829876 KEGG:ath:AT4G37220
            TAIR:At4g37220 eggNOG:NOG251518 InParanoid:O23164 OMA:YLFHEHI
            PhylomeDB:O23164 Genevestigator:O23164 Uniprot:O23164
        Length = 202

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 45/131 (34%), Positives = 72/131 (54%)

Query:     1 MNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFP----- 55
             ++RT  ++ M T LLV Y+F + P+V+F+   G FG W+A +A+   LF+PK FP     
Sbjct:    64 LDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEWLEI 123

Query:    56 -VARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYC 114
              VA  ++ V++P+ +A  LRE     V CL+I   +    I+  GGF+N     +  S  
Sbjct:   124 PVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGISNT 183

Query:   115 LGVAFLFFFTV 125
             +G+  L  + V
Sbjct:   184 IGIVALLVYPV 194


>TAIR|locus:2044641 [details] [associations]
            symbol:COR413-PM1 "AT2G15970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=ISS] [GO:0009631 "cold acclimation" evidence=IEP]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
            [GO:0042631 "cellular response to water deprivation"
            evidence=IEP;RCA] [GO:0005773 "vacuole" evidence=IDA] [GO:0009269
            "response to desiccation" evidence=RCA] [GO:0009409 "response to
            cold" evidence=RCA] [GO:0009651 "response to salt stress"
            evidence=RCA] GO:GO:0016021 GO:GO:0005886 GO:GO:0009737
            GO:GO:0005773 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009631
            GO:GO:0042631 InterPro:IPR008892 Pfam:PF05562 EMBL:AF283004
            EMBL:AC006438 EMBL:AB044404 EMBL:AY093767 EMBL:AY143813
            EMBL:AY088558 IPI:IPI00547690 PIR:C84535 RefSeq:NP_179196.1
            UniGene:At.22305 UniGene:At.24347 STRING:Q9XIM7 PaxDb:Q9XIM7
            PRIDE:Q9XIM7 EnsemblPlants:AT2G15970.1 GeneID:816092
            KEGG:ath:AT2G15970 TAIR:At2g15970 eggNOG:NOG267474
            HOGENOM:HOG000239742 InParanoid:Q9XIM7 OMA:GTTFLEW PhylomeDB:Q9XIM7
            ProtClustDB:CLSN2717102 Genevestigator:Q9XIM7 Uniprot:Q9XIM7
        Length = 197

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 47/131 (35%), Positives = 71/131 (54%)

Query:     1 MNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPK------TF 54
             ++RT  +++M T+LL+ Y+F S P+++F I RG+ G W+A +AV   LF+PK        
Sbjct:    62 LDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLEL 121

Query:    55 PVARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYC 114
             PVA  +L V+ P  +A   R+       CL IG  ++   IR  GGFRN     +  S  
Sbjct:   122 PVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNT 181

Query:   115 LGVAFLFFFTV 125
             +G+  L  F V
Sbjct:   182 VGIICLVVFPV 192


>TAIR|locus:2077982 [details] [associations]
            symbol:COR413-PM2 "AT3G50830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
            GO:GO:0016021 GO:GO:0005886 GO:GO:0005774 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AL049862
            InterPro:IPR008892 Pfam:PF05562 eggNOG:NOG267474
            HOGENOM:HOG000239742 ProtClustDB:CLSN2717102 EMBL:AF283005
            EMBL:AF360305 EMBL:AY056356 IPI:IPI00517665 PIR:T08404
            RefSeq:NP_190652.1 UniGene:At.22366 IntAct:Q9SVL6 STRING:Q9SVL6
            PRIDE:Q9SVL6 GeneID:824247 KEGG:ath:AT3G50830 TAIR:At3g50830
            InParanoid:Q9SVL6 OMA:FIYPVWA PhylomeDB:Q9SVL6
            Genevestigator:Q9SVL6 Uniprot:Q9SVL6
        Length = 203

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 47/131 (35%), Positives = 70/131 (53%)

Query:     1 MNRTGRRSHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTFPV---- 56
             ++RT  ++ M T+LL+ Y+F S P+V+F  L G  G W+A +AV   LF+PK FP     
Sbjct:    65 LDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPDWLEM 124

Query:    57 --ARFILFVITPAWLANGLREGIAAGVYCLIIGVLVIITEIRGIGGFRNCECNLHSFSYC 114
               +  +L V++P +LA+ +R      V  L IG  ++   IR  GGFRN        S  
Sbjct:   125 PGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRGVSNT 184

Query:   115 LGVAFLFFFTV 125
             LG+  L  + V
Sbjct:   185 LGIILLLVYPV 195


>TAIR|locus:2049003 [details] [associations]
            symbol:AT2G23680 "AT2G23680" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0016020 "membrane" evidence=IDA]
            [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0002237 "response to
            molecule of bacterial origin" evidence=RCA] [GO:0002679
            "respiratory burst involved in defense response" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009595
            "detection of biotic stimulus" evidence=RCA] [GO:0009625 "response
            to insect" evidence=RCA] [GO:0009697 "salicylic acid biosynthetic
            process" evidence=RCA] [GO:0009862 "systemic acquired resistance,
            salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009863 "salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0042742
            "defense response to bacterium" evidence=RCA] [GO:0043069 "negative
            regulation of programmed cell death" evidence=RCA] [GO:0043900
            "regulation of multi-organism process" evidence=RCA] [GO:0045088
            "regulation of innate immune response" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] [GO:0051707 "response to
            other organism" evidence=RCA] EMBL:AC003040 GO:GO:0016021
            GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
            EMBL:AC004482 InterPro:IPR008892 Pfam:PF05562 HOGENOM:HOG000239742
            EMBL:AV824982 IPI:IPI00536066 IPI:IPI00891765 PIR:T02423
            RefSeq:NP_001118373.1 RefSeq:NP_179948.1 UniGene:At.27155
            STRING:O64834 GeneID:816899 KEGG:ath:AT2G23680 TAIR:At2g23680
            eggNOG:NOG236038 OMA:KYSNNIM PhylomeDB:O64834
            ProtClustDB:CLSN2683011 Genevestigator:O64834 Uniprot:O64834
        Length = 189

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 38/124 (30%), Positives = 64/124 (51%)

Query:     8 SHMQTNLLVLYLFTSFPTVLFKILRGQFGCWVACLAVGANLFYPKTF------PVARFIL 61
             +++  +LL  YLF+S P V+F++LR   G W+A L V   LF P  F      P A  +L
Sbjct:    54 NNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLTVILRLFLPNHFHESLEIPGATILL 113

Query:    62 FVITPAWLANGLREGI--AAGVYCLIIGVLVIITEIRGIGGFRNC--ECNLHSFSYCLGV 117
              V+TP+ +    R+ +    G  CL+    +I    +  GG +N   + +  ++S CL +
Sbjct:   114 IVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHTKACGGIKNSFTQKDKVTYSICLWI 173

Query:   118 AFLF 121
              F++
Sbjct:   174 LFVY 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.337   0.149   0.501    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130       130   0.00091  102 3  11 21  0.38    30
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.87u 0.12s 11.99t   Elapsed:  00:00:01
  Total cpu time:  11.87u 0.12s 11.99t   Elapsed:  00:00:01
  Start:  Fri May 10 07:49:49 2013   End:  Fri May 10 07:49:50 2013

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