Query 032925
Match_columns 130
No_of_seqs 131 out of 359
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 12:16:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lju_A Putative oxidoreductase 100.0 1.2E-43 4.2E-48 258.9 10.7 84 40-129 3-87 (108)
2 2jya_A AGR_C_3324P, uncharacte 100.0 1.3E-42 4.3E-47 253.0 7.5 76 51-129 3-79 (106)
3 4b0z_A RPN12, 26S proteasome r 88.3 0.23 7.8E-06 38.6 2.3 22 105-126 199-220 (229)
4 3t5v_A Nuclear mRNA export pro 83.5 0.56 1.9E-05 38.5 2.4 22 105-126 233-254 (316)
5 4b4t_T 26S proteasome regulato 82.3 0.54 1.9E-05 37.6 1.9 21 105-125 208-228 (274)
6 1ng7_A Poliovirus 3A-N, genome 73.9 1.4 4.9E-05 28.7 1.6 14 112-125 32-45 (60)
7 2hpu_A NOSL protein; alpha bet 73.2 3.4 0.00012 31.3 3.8 19 105-123 114-132 (175)
8 1mwq_A Hypothetical protein HI 58.3 9 0.00031 25.3 3.2 26 105-130 65-97 (101)
9 3bsu_A Ribonuclease H1, RNAse 51.8 8.5 0.00029 23.8 2.1 16 105-120 35-50 (53)
10 2gjf_A Designed protein; proca 51.7 21 0.00073 22.4 4.1 25 105-129 52-76 (78)
11 1qhk_A RNAse HI, protein (ribo 50.2 6.7 0.00023 23.7 1.4 14 105-118 33-46 (47)
12 2fiu_A Conserved hypothetical 50.0 11 0.00038 25.4 2.6 15 105-119 58-72 (99)
13 3dhx_A Methionine import ATP-b 47.0 15 0.00051 24.9 2.9 26 105-130 68-97 (106)
14 1vjq_A Designed protein; struc 45.0 28 0.00096 21.8 3.9 25 105-129 44-68 (79)
15 3jtp_A Adapter protein MECA 1; 44.3 15 0.00051 24.8 2.6 18 105-123 10-27 (98)
16 3lo3_A Uncharacterized conserv 44.0 16 0.00054 24.4 2.6 15 105-119 57-71 (94)
17 1qc6_A EVH1 domain from ENA/VA 42.2 15 0.00052 26.0 2.5 16 105-120 89-104 (130)
18 3syx_A Sprouty-related, EVH1 d 42.1 14 0.00047 27.1 2.2 44 71-120 66-114 (130)
19 4dgh_A Sulfate permease family 41.5 13 0.00044 25.1 1.9 15 107-121 111-125 (130)
20 3hh1_A Tetrapyrrole methylase 41.4 21 0.00072 24.1 3.0 31 90-128 83-114 (117)
21 1xod_A Spred1; sprouty, EVH1, 39.3 18 0.00061 25.6 2.4 17 105-121 92-108 (118)
22 3p3d_A Nucleoporin 53; structu 39.2 14 0.00047 27.2 1.9 22 104-125 65-86 (132)
23 2hw0_A Replicase; alpha+beta, 38.3 15 0.00051 26.0 1.8 15 108-122 86-100 (115)
24 3ewt_E Tumor necrosis factor r 36.0 21 0.00071 19.4 1.8 14 110-123 12-25 (25)
25 1egx_A VAsp, vasodilator-stimu 35.5 25 0.00086 24.6 2.7 16 105-120 90-105 (115)
26 1evh_A WH1 domain, protein (ME 35.5 25 0.00086 24.4 2.7 16 105-120 88-103 (112)
27 2jp2_A Spred-2, sprouty-relate 35.1 25 0.00087 25.1 2.7 17 105-121 101-117 (126)
28 2kln_A Probable sulphate-trans 34.8 15 0.00051 24.8 1.4 15 107-121 110-124 (130)
29 4g2e_A Peroxiredoxin; redox pr 34.8 33 0.0011 23.6 3.2 24 105-128 69-92 (157)
30 2qbu_A Precorrin-2 methyltrans 34.7 33 0.0011 25.2 3.4 32 89-128 97-128 (232)
31 1ddw_A GLGF-domain protein hom 34.5 22 0.00077 25.2 2.3 46 71-120 52-102 (120)
32 2ebb_A Pterin-4-alpha-carbinol 33.4 25 0.00084 24.1 2.3 31 86-120 13-44 (101)
33 1snn_A DHBP synthase, 3,4-dihy 33.4 23 0.0008 28.1 2.4 18 109-126 194-211 (227)
34 3ced_A Methionine import ATP-b 33.3 31 0.0011 23.0 2.8 26 105-130 67-97 (98)
35 2p6w_A VP54, putative glycosyl 32.3 22 0.00077 28.2 2.1 20 109-128 24-43 (213)
36 2qrr_A Methionine import ATP-b 31.6 35 0.0012 22.6 2.8 26 105-130 70-99 (101)
37 4dgf_A Sulfate transporter sul 31.4 22 0.00076 24.2 1.8 15 107-121 114-128 (135)
38 2hiq_A Hypothetical protein YD 31.1 19 0.00066 25.8 1.5 29 91-121 48-76 (113)
39 2e0n_A Precorrin-2 C20-methylt 31.0 36 0.0012 25.8 3.1 32 89-128 99-130 (259)
40 3pxi_a Adapter protein MECA 1; 30.4 23 0.00078 24.6 1.7 18 105-123 23-40 (111)
41 3drn_A Peroxiredoxin, bacterio 30.2 47 0.0016 22.4 3.4 24 105-128 68-91 (161)
42 2cqy_A Propionyl-COA carboxyla 30.0 47 0.0016 20.8 3.1 22 107-128 30-51 (108)
43 3ndc_A Precorrin-4 C(11)-methy 29.7 41 0.0014 26.0 3.3 32 89-128 79-110 (264)
44 1xvw_A Hypothetical protein RV 29.4 36 0.0012 22.7 2.6 25 104-128 74-98 (160)
45 3e21_A HFAF1, FAS-associated f 28.8 20 0.00068 21.6 1.0 18 109-126 19-36 (45)
46 2a4v_A Peroxiredoxin DOT5; yea 28.6 44 0.0015 22.5 2.9 24 105-128 73-96 (159)
47 3llo_A Prestin; STAS domain, c 28.5 15 0.00051 25.1 0.5 16 106-121 126-141 (143)
48 1usm_A DCOH, hepatocyte nuclea 28.3 34 0.0012 22.3 2.2 30 89-120 1-30 (80)
49 2yzh_A Probable thiol peroxida 28.3 49 0.0017 22.6 3.2 25 104-128 83-108 (171)
50 2z6r_A Diphthine synthase; met 27.9 38 0.0013 25.7 2.8 31 90-128 81-111 (265)
51 4gqc_A Thiol peroxidase, perox 27.8 46 0.0016 23.2 3.0 24 105-128 72-95 (164)
52 3jst_A Putative pterin-4-alpha 27.6 42 0.0014 22.6 2.7 31 86-120 16-48 (97)
53 2w5f_A Endo-1,4-beta-xylanase 27.6 47 0.0016 28.5 3.5 22 105-126 242-263 (540)
54 3gkn_A Bacterioferritin comigr 27.5 34 0.0012 23.0 2.2 24 105-128 74-97 (163)
55 1psq_A Probable thiol peroxida 27.5 45 0.0016 22.7 2.9 24 105-128 79-103 (163)
56 2zib_A Type II antifreeze prot 27.5 32 0.0011 23.0 2.0 37 85-124 8-44 (133)
57 3mio_A DHBP synthase, 3,4-dihy 27.4 36 0.0012 26.6 2.5 18 109-126 176-193 (206)
58 1gqe_A Release factor 2, RF2; 27.2 31 0.0011 29.2 2.3 15 115-129 153-167 (365)
59 1tp9_A Peroxiredoxin, PRX D (t 26.9 60 0.0021 22.2 3.5 24 105-128 76-101 (162)
60 3niy_A Endo-1,4-beta-xylanase; 26.9 70 0.0024 26.0 4.3 22 105-126 78-99 (341)
61 1mwp_A Amyloid A4 protein; hep 26.8 34 0.0012 23.9 2.1 23 105-127 33-55 (96)
62 2qsw_A Methionine import ATP-b 26.7 33 0.0011 22.6 2.0 27 104-130 69-99 (100)
63 2ek1_A RNA-binding protein 12; 26.7 58 0.002 20.0 3.1 21 105-125 61-82 (95)
64 1i2h_A PSD-ZIP45(homer-1C/VESL 26.5 37 0.0013 25.7 2.4 46 71-120 57-107 (168)
65 1va0_A Uroporphyrin-III C-meth 26.1 58 0.002 24.2 3.5 31 90-128 79-109 (239)
66 2jpc_A SSRB; DNA binding prote 25.9 25 0.00086 20.3 1.1 19 105-123 40-58 (61)
67 4e16_A Precorrin-4 C(11)-methy 25.6 47 0.0016 25.3 2.9 32 89-128 80-111 (253)
68 1xyz_A 1,4-beta-D-xylan-xylano 25.3 40 0.0014 27.2 2.5 22 105-126 83-104 (347)
69 3tbi_A RNA polymerase-associat 25.0 28 0.00095 25.3 1.4 15 111-125 59-73 (115)
70 1nq6_A XYS1; glycoside hydrola 25.0 31 0.0011 26.9 1.8 22 105-126 57-78 (302)
71 4grd_A N5-CAIR mutase, phospho 24.9 53 0.0018 25.1 3.0 22 108-129 25-46 (173)
72 1s4d_A Uroporphyrin-III C-meth 24.7 51 0.0017 25.6 3.0 32 89-128 95-126 (280)
73 4b4k_A N5-carboxyaminoimidazol 24.5 54 0.0019 25.3 3.0 22 108-129 35-56 (181)
74 2ihr_1 Peptide chain release f 24.3 33 0.0011 29.0 1.9 15 115-129 141-155 (365)
75 4a8x_A RNA-binding protein wit 24.3 70 0.0024 19.2 3.1 20 105-124 51-71 (88)
76 3d5a_X RF1, peptide chain rele 24.2 35 0.0012 28.8 2.0 15 115-129 132-146 (354)
77 2wfc_A Peroxiredoxin 5, PRDX5; 24.1 61 0.0021 22.7 3.1 24 105-128 72-97 (167)
78 1zbt_A RF-1, peptide chain rel 24.0 35 0.0012 28.9 2.0 15 115-129 150-164 (371)
79 3ro8_A Endo-1,4-beta-xylanase; 23.7 54 0.0019 26.7 3.1 22 105-126 58-79 (341)
80 3raz_A Thioredoxin-related pro 23.7 58 0.002 21.4 2.8 24 105-128 62-85 (151)
81 1wde_A Probable diphthine synt 23.7 64 0.0022 25.2 3.4 30 91-128 88-117 (294)
82 1ve2_A Uroporphyrin-III C-meth 23.7 64 0.0022 24.0 3.3 31 90-128 82-112 (235)
83 1k4i_A 3,4-dihydroxy-2-butanon 23.2 51 0.0018 26.3 2.8 19 108-126 193-211 (233)
84 3p7x_A Probable thiol peroxida 23.1 68 0.0023 21.8 3.1 24 105-128 82-106 (166)
85 1tks_A 3,4-dihydroxy-2-butanon 23.0 42 0.0014 26.2 2.2 18 109-126 176-193 (204)
86 3ll8_A Serine/threonine-protei 23.0 81 0.0028 26.2 4.0 24 105-129 244-267 (357)
87 2v6u_A Pterin-4A-carbinolamine 22.9 49 0.0017 22.6 2.3 33 86-120 19-51 (104)
88 1rq0_A RF-1, peptide chain rel 22.9 38 0.0013 28.4 2.0 15 115-129 113-127 (342)
89 3md1_A Nuclear and cytoplasmic 22.6 82 0.0028 18.7 3.1 20 105-124 47-67 (83)
90 3ulh_A THO complex subunit 4; 22.5 75 0.0026 20.0 3.1 21 105-125 74-95 (107)
91 4a56_A PULS, pullulanase secre 22.5 35 0.0012 23.6 1.5 13 113-125 38-50 (93)
92 2nz2_A Argininosuccinate synth 22.4 25 0.00087 29.5 0.9 20 107-126 154-173 (413)
93 3bs9_A Nucleolysin TIA-1 isofo 22.2 81 0.0028 18.9 3.1 20 105-124 52-72 (87)
94 3sol_A Type II secretion pathw 21.8 41 0.0014 23.4 1.7 13 113-125 38-50 (94)
95 3eyt_A Uncharacterized protein 21.4 57 0.0019 21.5 2.4 20 109-128 78-97 (158)
96 1nu4_A U1A RNA binding domain; 21.4 84 0.0029 19.3 3.1 20 105-124 55-75 (97)
97 2cpe_A RNA-binding protein EWS 21.3 80 0.0027 20.2 3.0 21 105-125 69-90 (113)
98 3kuu_A Phosphoribosylaminoimid 20.9 71 0.0024 24.4 3.0 22 108-129 25-46 (174)
99 1xmp_A PURE, phosphoribosylami 20.7 73 0.0025 24.3 3.0 22 108-129 24-45 (170)
100 4f8x_A Endo-1,4-beta-xylanase; 20.7 60 0.0021 26.5 2.8 22 105-126 61-82 (335)
101 2k89_A PLA2P, PLAP, phospholip 20.5 45 0.0015 22.5 1.6 14 111-124 42-55 (80)
102 2b3t_B RF-1, peptide chain rel 20.4 33 0.0011 28.9 1.2 15 115-129 136-150 (360)
103 2dgt_A RNA-binding protein 30; 20.2 79 0.0027 19.4 2.7 20 105-124 48-68 (92)
104 1t0f_A Transposon TN7 transpos 20.1 61 0.0021 25.5 2.6 19 110-128 148-166 (276)
No 1
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=100.00 E-value=1.2e-43 Score=258.94 Aligned_cols=84 Identities=35% Similarity=0.621 Sum_probs=77.4
Q ss_pred ccccCCCcccccceEEEecCCCCCCCCCCCCCCCcEEEecCC-CCccCCCcCccCCCCccCCcCCceeeeCCHHHHHHHH
Q 032925 40 GMVSGIPEEHLRRRVVIYTPARTATQQGSGKLGRWKINFMST-QKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFA 118 (130)
Q Consensus 40 ~~vSG~P~e~~~r~vrIY~Pak~amQSG~~~t~~W~LeF~~~-~~w~nPLMGWtsS~D~~sqv~~~~L~F~SkE~Aiafa 118 (130)
|...|.|+. ++||||+|+|+|||||++++++|+|||++. ++|+|||||||||+||++|| +|+|+|+|+||+||
T Consensus 3 ~~~~~~~~~---~~arIy~Pak~amQSG~~~t~~W~lefe~~~~r~~nPLMGWtsS~D~~~qv---~L~F~skE~AiayA 76 (108)
T 2lju_A 3 GSMQEQVSN---VRARIYKPAKSTMQSGHSKLKAWKLEFEPSCTQYTEPLMNWTGSHDTKQQV---CLSFTTRELAIAYA 76 (108)
T ss_dssp --CCCCCCC---CEEEEECCCCCCSSSSCCSCCCEEEEECCCSSCCCCCCCCCSSSCCCCCCS---CEEESSHHHHHHHH
T ss_pred cccCCCCCC---CEEEEeCCCCCccccCCCCCCceEEEEecCCCCccCCCccccCCCCccccc---eEecCCHHHHHHHH
Confidence 455667766 899999999999999999999999999986 69999999999999999999 99999999999999
Q ss_pred HHcCCeEEEEE
Q 032925 119 ERHGWEYVVSV 129 (130)
Q Consensus 119 ek~Gw~Y~V~~ 129 (130)
|||||+|+|+.
T Consensus 77 ek~G~~y~V~e 87 (108)
T 2lju_A 77 VAHKIDYTVLQ 87 (108)
T ss_dssp HHTTCEEEEEC
T ss_pred HHcCCEEEEec
Confidence 99999999974
No 2
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.3e-42 Score=252.95 Aligned_cols=76 Identities=37% Similarity=0.653 Sum_probs=72.4
Q ss_pred cceEEEecCCCCCCCCCCCCCCCcEEEecCC-CCccCCCcCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEEE
Q 032925 51 RRRVVIYTPARTATQQGSGKLGRWKINFMST-QKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 51 ~r~vrIY~Pak~amQSG~~~t~~W~LeF~~~-~~w~nPLMGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
+++||||+|+|+|||||++++++|+|||++. ++|+|||||||||+||++|| +|+|+|+|+||+|||||||+|+|+.
T Consensus 3 ~m~arIy~Pak~amQSG~~~t~~W~lefe~~~~rw~nPLMGWtsS~D~~~qv---~L~F~skE~AiayAek~G~~y~V~e 79 (106)
T 2jya_A 3 HMSAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQV---KLTFETQEQAEAYAQRKGIEYRVIL 79 (106)
T ss_dssp -CEEEEECCSSCCCTTTTCCSCCEEEEEEEECCSCCCTTTCSCSCCCSEEEE---EEEESSHHHHHHHHHHHTCEEEECC
T ss_pred CcEEEEeCCCCCccccCCCCCCceEEEEecCCCCccCCCcCcCCCCCccccc---eEecCCHHHHHHHHHHcCCEEEEeC
Confidence 4789999999999999999999999999985 79999999999999999999 9999999999999999999999974
No 3
>4b0z_A RPN12, 26S proteasome regulatory subunit RPN12; protein binding, proteasome ubitquitin; HET: SGM GOL; 1.58A {Schizosaccharomyces pombe}
Probab=88.31 E-value=0.23 Score=38.55 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=20.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
.|.|+|.|+++.||+++||...
T Consensus 199 ~L~f~s~~e~~~f~~~~gw~i~ 220 (229)
T 4b0z_A 199 LLYLENTKETEKLAEERGWDIR 220 (229)
T ss_dssp HTTCSSHHHHHHHHHHHTCEEE
T ss_pred HhCCCCHHHHHHHHHHcCCEEe
Confidence 5899999999999999999763
No 4
>3t5v_A Nuclear mRNA export protein SAC3; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=83.48 E-value=0.56 Score=38.51 Aligned_cols=22 Identities=23% Similarity=0.339 Sum_probs=20.3
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
.|.|+|.|++++||+.+||.+.
T Consensus 233 ~L~Fds~ee~~~F~~~~gl~~~ 254 (316)
T 3t5v_A 233 MLLFNNRQEIIEFCNYYSIEII 254 (316)
T ss_dssp HTTCSSHHHHHHHHHHTTCCEE
T ss_pred HhCCCCHHHHHHHHHHCCCeEe
Confidence 5889999999999999999974
No 5
>4b4t_T 26S proteasome regulatory subunit RPN12; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.28 E-value=0.54 Score=37.64 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=19.2
Q ss_pred eeeeCCHHHHHHHHHHcCCeE
Q 032925 105 GLSFDSKEAAREFAERHGWEY 125 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y 125 (130)
.|.|+|.+++++||+++||..
T Consensus 208 ~L~F~s~~e~~~F~~~~gW~~ 228 (274)
T 4b4t_T 208 LLFFNNEKETEKFALERNWPI 228 (274)
T ss_dssp HHTCCSHHHHHHHHHHTTCCC
T ss_pred HhCCCCHHHHHHHHHHcCCEE
Confidence 588999999999999999964
No 6
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=73.86 E-value=1.4 Score=28.71 Aligned_cols=14 Identities=29% Similarity=0.921 Sum_probs=12.2
Q ss_pred HHHHHHHHHcCCeE
Q 032925 112 EAAREFAERHGWEY 125 (130)
Q Consensus 112 E~Aiafaek~Gw~Y 125 (130)
|+-++||+++||-.
T Consensus 32 ~eV~~YC~~kGwIi 45 (60)
T 1ng7_A 32 QEVRDYCEKKGWIV 45 (60)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHCCcee
Confidence 67799999999964
No 7
>2hpu_A NOSL protein; alpha beta topology, metal transport; NMR {Achromobacter cycloclastes} SCOP: d.357.1.1 PDB: 2hq3_A
Probab=73.19 E-value=3.4 Score=31.28 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=17.5
Q ss_pred eeeeCCHHHHHHHHHHcCC
Q 032925 105 GLSFDSKEAAREFAERHGW 123 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw 123 (130)
-+-|.++++|.+|+++||=
T Consensus 114 l~pFa~k~dAe~Fa~~~GG 132 (175)
T 2hpu_A 114 AVPFSSRDEAAAFVLAEGG 132 (175)
T ss_dssp EEEESCHHHHHHHHHHTEE
T ss_pred ccCcCCHHHHHHHHHHcCC
Confidence 6889999999999999983
No 8
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=58.27 E-value=9 Score=25.26 Aligned_cols=26 Identities=23% Similarity=0.477 Sum_probs=20.5
Q ss_pred eeeeCCHHHHHHHHHH-----cCC--eEEEEEC
Q 032925 105 GLSFDSKEAAREFAER-----HGW--EYVVSVY 130 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-----~Gw--~Y~V~~~ 130 (130)
.+.++|+|+|++++++ +|. .|+|..|
T Consensus 65 i~~a~s~eea~~~~~~dP~~~~G~~~~~eVrp~ 97 (101)
T 1mwq_A 65 IAQFENLQAAKDWAAQDPYVEAGVYADVIVKPF 97 (101)
T ss_dssp EEECSSHHHHHHHHHTCHHHHTTCEEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHhCChhhcCCcceEEEEEe
Confidence 5789999999999976 465 5787654
No 9
>3bsu_A Ribonuclease H1, RNAse H1; RNAse H, RNA/DNA hybrid; HET: DNA 5IU; 2.10A {Homo sapiens}
Probab=51.77 E-value=8.5 Score=23.76 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=13.8
Q ss_pred eeeeCCHHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAER 120 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek 120 (130)
.=.|.|++||.+|.+.
T Consensus 35 yK~F~t~~eA~~~l~~ 50 (53)
T 3bsu_A 35 FKKFATEDEAWAFVRK 50 (53)
T ss_dssp EEEESSHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHh
Confidence 5579999999999875
No 10
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=51.68 E-value=21 Score=22.42 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=23.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
.+.....++-.+|-+++|++|+|..
T Consensus 52 ~V~p~~~~~f~~~L~~~~I~y~Vli 76 (78)
T 2gjf_A 52 LIPSDMVEWFLEMLKAKGIPFTVYV 76 (78)
T ss_dssp EECTTSHHHHHHHHHHHTCCEEEEE
T ss_pred EECHHHHHHHHHHHHHCCCcEEEEe
Confidence 7889999999999999999999964
No 11
>1qhk_A RNAse HI, protein (ribonuclease HI); ribonuclease HI N-terminal domain, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.100.1.2
Probab=50.17 E-value=6.7 Score=23.69 Aligned_cols=14 Identities=36% Similarity=0.425 Sum_probs=12.1
Q ss_pred eeeeCCHHHHHHHH
Q 032925 105 GLSFDSKEAAREFA 118 (130)
Q Consensus 105 ~L~F~SkE~Aiafa 118 (130)
.=.|.|+|||.+|.
T Consensus 33 yK~F~t~~eA~~~l 46 (47)
T 1qhk_A 33 YKKFNSYEQAKSFL 46 (47)
T ss_dssp CEEESCHHHHHHHH
T ss_pred cCCCCCHHHHHHHh
Confidence 45799999999985
No 12
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=49.99 E-value=11 Score=25.45 Aligned_cols=15 Identities=20% Similarity=0.180 Sum_probs=13.7
Q ss_pred eeeeCCHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAE 119 (130)
Q Consensus 105 ~L~F~SkE~Aiafae 119 (130)
.+.|+|.|+|.++..
T Consensus 58 iieFpS~~aa~~~~~ 72 (99)
T 2fiu_A 58 VIEFPSVQHAIDCYN 72 (99)
T ss_dssp EEEESSHHHHHHHHH
T ss_pred EEECCCHHHHHHHHc
Confidence 889999999999875
No 13
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=47.01 E-value=15 Score=24.89 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=20.8
Q ss_pred eeeeC----CHHHHHHHHHHcCCeEEEEEC
Q 032925 105 GLSFD----SKEAAREFAERHGWEYVVSVY 130 (130)
Q Consensus 105 ~L~F~----SkE~Aiafaek~Gw~Y~V~~~ 130 (130)
.+.+. ..++|++|.+++|+..+|..|
T Consensus 68 ~v~l~G~~~~~~~ai~~L~~~~v~vEvl~~ 97 (106)
T 3dhx_A 68 LTEMHGTQQDTQAAIAWLQEHHVKVEVLGY 97 (106)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCEEEEeee
Confidence 55553 357899999999999999865
No 14
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=45.02 E-value=28 Score=21.84 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=22.8
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
.+.....++-.++-+++|++|+|..
T Consensus 44 ~V~p~~~~~f~~~L~~~~i~~~v~i 68 (79)
T 1vjq_A 44 LIPSDMVEWFLEMLKAKGIPFTVYV 68 (79)
T ss_dssp EECGGGHHHHHHHHHHTTCCEEEEE
T ss_pred EECHHHHHHHHHHHHHCCCcEEEEe
Confidence 7888999999999999999999964
No 15
>3jtp_A Adapter protein MECA 1; MECA;adaptor protein;degradation TAG, competence, sporulation, protein binding; 2.17A {Bacillus subtilis} PDB: 2y1r_I* 3pxg_a
Probab=44.32 E-value=15 Score=24.83 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=16.2
Q ss_pred eeeeCCHHHHHHHHHHcCC
Q 032925 105 GLSFDSKEAAREFAERHGW 123 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw 123 (130)
.+.|++.|+.|++|+ .+.
T Consensus 10 i~~F~d~edvI~~a~-~~~ 27 (98)
T 3jtp_A 10 VLRFGDFEDVISLSK-LNV 27 (98)
T ss_dssp EEEESSHHHHHHHHH-TTC
T ss_pred EEEcCCHHHHHHHhC-CCC
Confidence 789999999999999 654
No 16
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=44.00 E-value=16 Score=24.43 Aligned_cols=15 Identities=33% Similarity=0.390 Sum_probs=13.6
Q ss_pred eeeeCCHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAE 119 (130)
Q Consensus 105 ~L~F~SkE~Aiafae 119 (130)
.+.|+|.|+|.+|..
T Consensus 57 iieFps~~aa~a~y~ 71 (94)
T 3lo3_A 57 ILEFPSREDAYNWYH 71 (94)
T ss_dssp EEEESSHHHHHHHHH
T ss_pred EEECCCHHHHHHHHC
Confidence 899999999999864
No 17
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=42.24 E-value=15 Score=26.03 Aligned_cols=16 Identities=50% Similarity=0.785 Sum_probs=15.0
Q ss_pred eeeeCCHHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAER 120 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek 120 (130)
.|.|.|+|||-+|.++
T Consensus 89 GL~F~se~eA~~F~~~ 104 (130)
T 1qc6_A 89 GLNFASKEEATTFSNA 104 (130)
T ss_dssp EEEESCHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHH
Confidence 8999999999999876
No 18
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=42.08 E-value=14 Score=27.08 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=28.5
Q ss_pred CCCcEEEecCCC--Cc---cCCCcCccCCCCccCCcCCceeeeCCHHHHHHHHHH
Q 032925 71 LGRWKINFMSTQ--KW---ENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 71 t~~W~LeF~~~~--~w---~nPLMGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
.+.++|++.-.. ++ ...+--|.-+ | ++ --|.|.|+|||-+|++.
T Consensus 66 d~~vvinc~I~~~l~Ynkatp~FHqWrd~-~---~~--yGL~F~S~~dA~~F~~~ 114 (130)
T 3syx_A 66 DKMVVLECMLKKDLIYNKVTPTFHHWKID-D---KK--FGLTFQSPADARAFDRG 114 (130)
T ss_dssp TCCEEEEEECCTTCEEEEEETTEEEEEET-T---EE--EEEEESSHHHHHHHHHH
T ss_pred CCeEEEeeeecCCceEEeccccccccccc-C---eE--eecccCCHHHHHHHHHH
Confidence 456888876431 11 2344556643 2 33 27999999999999974
No 19
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=41.52 E-value=13 Score=25.12 Aligned_cols=15 Identities=20% Similarity=0.027 Sum_probs=13.4
Q ss_pred eeCCHHHHHHHHHHc
Q 032925 107 SFDSKEAAREFAERH 121 (130)
Q Consensus 107 ~F~SkE~Aiafaek~ 121 (130)
.|+|.++|++.|+.+
T Consensus 111 i~~s~~~Al~~~~~~ 125 (130)
T 4dgh_A 111 VYPVFEGALSAALTE 125 (130)
T ss_dssp EESSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHH
Confidence 699999999999864
No 20
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=41.36 E-value=21 Score=24.15 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=24.9
Q ss_pred CccC-CCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 90 GWTS-TGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 90 GWts-S~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.--+ +|||. -|++-.+-++.|+++|++++|.
T Consensus 83 ~~l~d~GdP~--------i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 83 ALVTDAGTPA--------ISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp EEEEETTSCG--------GGSTTHHHHHHHHHTTCCEEEE
T ss_pred EEEecCCcCe--------EeccHHHHHHHHHHCCCcEEEe
Confidence 3445 68886 4788888899999999999885
No 21
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=39.33 E-value=18 Score=25.55 Aligned_cols=17 Identities=41% Similarity=0.634 Sum_probs=15.4
Q ss_pred eeeeCCHHHHHHHHHHc
Q 032925 105 GLSFDSKEAAREFAERH 121 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~ 121 (130)
-|.|.|++||-+|.++.
T Consensus 92 GL~F~se~eA~~F~~~v 108 (118)
T 1xod_A 92 GLTFQSPADARAFDRGI 108 (118)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHH
Confidence 89999999999998863
No 22
>3p3d_A Nucleoporin 53; structural genomics, PSI-2, protein structure initiative, NE structural genomix research consortium, nysgxrc; 2.35A {Pichia guilliermondii}
Probab=39.21 E-value=14 Score=27.21 Aligned_cols=22 Identities=14% Similarity=0.298 Sum_probs=19.4
Q ss_pred ceeeeCCHHHHHHHHHHcCCeE
Q 032925 104 AGLSFDSKEAAREFAERHGWEY 125 (130)
Q Consensus 104 ~~L~F~SkE~Aiafaek~Gw~Y 125 (130)
++|+|+|+.+|.+-+.+||--+
T Consensus 65 ikItYds~~~A~rAL~~NG~ii 86 (132)
T 3p3d_A 65 TKITYDNPASAVDALLENGAVF 86 (132)
T ss_dssp EEEEBSSHHHHHHHHTTTTCEE
T ss_pred EEEEcCCHHHHHHHHHhCCeEe
Confidence 3899999999999999999643
No 23
>2hw0_A Replicase; alpha+beta, hydrolase, replication; NMR {Porcine circovirus 2}
Probab=38.28 E-value=15 Score=26.04 Aligned_cols=15 Identities=13% Similarity=0.485 Sum_probs=13.4
Q ss_pred eCCHHHHHHHHHHcC
Q 032925 108 FDSKEAAREFAERHG 122 (130)
Q Consensus 108 F~SkE~Aiafaek~G 122 (130)
=.|.|+|++||.|.|
T Consensus 86 rgs~~q~~~Yc~Keg 100 (115)
T 2hw0_A 86 KGTDQQNKEYCSKEG 100 (115)
T ss_dssp CSCHHHHHHHHHTTS
T ss_pred cCCHHHHHHHhccCC
Confidence 368899999999998
No 24
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=36.04 E-value=21 Score=19.38 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=11.6
Q ss_pred CHHHHHHHHHHcCC.
Q 032925 110 SKEAAREFAERHGW. 123 (130)
Q Consensus 110 SkE~Aiafaek~Gw. 123 (130)
+..+...|+++||+
T Consensus 12 ~~~~Vk~fvR~~gi. 25 (25)
T 3ewt_E 12 TLSQVKGFVRKNGVx 26 (26)
T ss_pred hHHHHHHHHHHcCC.
Confidence 45788999999985
No 25
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=35.54 E-value=25 Score=24.58 Aligned_cols=16 Identities=56% Similarity=0.816 Sum_probs=15.0
Q ss_pred eeeeCCHHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAER 120 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek 120 (130)
-|.|.|++||-+|.++
T Consensus 90 GLnF~se~eA~~F~~~ 105 (115)
T 1egx_A 90 GLNFGSKEDAAQFAAG 105 (115)
T ss_dssp EEEESSHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHH
Confidence 8999999999999886
No 26
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=35.49 E-value=25 Score=24.43 Aligned_cols=16 Identities=56% Similarity=0.773 Sum_probs=15.0
Q ss_pred eeeeCCHHHHHHHHHH
Q 032925 105 GLSFDSKEAAREFAER 120 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek 120 (130)
.|.|.|++||-+|++.
T Consensus 88 GLnF~se~eA~~F~~~ 103 (112)
T 1evh_A 88 GLNFGSKEDANVFASA 103 (112)
T ss_dssp EEEESSHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHH
Confidence 8999999999999875
No 27
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=35.10 E-value=25 Score=25.13 Aligned_cols=17 Identities=41% Similarity=0.638 Sum_probs=15.4
Q ss_pred eeeeCCHHHHHHHHHHc
Q 032925 105 GLSFDSKEAAREFAERH 121 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~ 121 (130)
.|.|.|++||-+|.++-
T Consensus 101 GLnF~se~eA~~F~~~v 117 (126)
T 2jp2_A 101 GLTFQSPADARAFDRGV 117 (126)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHH
Confidence 89999999999998863
No 28
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=34.84 E-value=15 Score=24.80 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=13.7
Q ss_pred eeCCHHHHHHHHHHc
Q 032925 107 SFDSKEAAREFAERH 121 (130)
Q Consensus 107 ~F~SkE~Aiafaek~ 121 (130)
.|+|.++|++.|++.
T Consensus 110 i~~t~~~Al~~~~~~ 124 (130)
T 2kln_A 110 IFMTLPTAVQAFRRR 124 (130)
T ss_dssp EESCHHHHHHHHTTC
T ss_pred eECCHHHHHHHHHhh
Confidence 699999999999985
No 29
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=34.83 E-value=33 Score=23.56 Aligned_cols=24 Identities=21% Similarity=0.459 Sum_probs=21.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+..++.++..+|++++|++|.+.
T Consensus 69 ~vs~d~~~~~~~~~~~~~~~~p~l 92 (157)
T 4g2e_A 69 GISVDPPFSNKAFKEHNKLNFTIL 92 (157)
T ss_dssp EEESSCHHHHHHHHHHTTCCSEEE
T ss_pred eecccchhHHHHHHHHcCCcEEEE
Confidence 567799999999999999999764
No 30
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.70 E-value=33 Score=25.21 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=25.6
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
...-++|||. .|++-..-++.|+++|++++|.
T Consensus 97 V~~l~~GDP~--------i~~~~~~l~~~~~~~gi~v~vi 128 (232)
T 2qbu_A 97 VAFITLGDPS--------IYSTFSYLQQRIEDMGFKTEMV 128 (232)
T ss_dssp EEEEESBCTT--------BSCSHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCCCc--------cchhHHHHHHHHHHCCCcEEEe
Confidence 3455679996 5778888899999999999885
No 31
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=34.51 E-value=22 Score=25.16 Aligned_cols=46 Identities=24% Similarity=0.229 Sum_probs=27.0
Q ss_pred CCCcEEEecCCC-CccCCC----cCccCCCCccCCcCCceeeeCCHHHHHHHHHH
Q 032925 71 LGRWKINFMSTQ-KWENPL----MGWTSTGDPYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 71 t~~W~LeF~~~~-~w~nPL----MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
.++.+|+..-.. -..|+. .-|. .+|..... -|.|.|+|||-+|++.
T Consensus 52 ~~~vv~n~~i~~~l~y~~a~p~FhqW~-d~~~~~~~---GLnF~s~~eA~~F~~~ 102 (120)
T 1ddw_A 52 GSKAIINSTITPNMTFTKTSQKFGQWA-DSRANTVY---GLGFSSEHHLSKFAEK 102 (120)
T ss_dssp TTEEEEEEECCTTCCCEECSSSEEEEE-ETTTTEEE---EEECSSHHHHHHHHHH
T ss_pred CCEEEEeCEecCCcEEeeCCccccEEE-cCCCcEEE---EeccCCHHHHHHHHHH
Confidence 457777776432 112222 2233 12212444 8999999999999875
No 32
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=33.44 E-value=25 Score=24.10 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=24.3
Q ss_pred CCCcCccCCCCc-cCCcCCceeeeCCHHHHHHHHHH
Q 032925 86 NPLMGWTSTGDP-YANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 86 nPLMGWtsS~D~-~sqv~~~~L~F~SkE~Aiafaek 120 (130)
..|-||+-.+++ +.. ..+|++-.+|++|..+
T Consensus 13 ~~l~gW~~~~~~~i~r----~f~F~~f~~a~~F~~~ 44 (101)
T 2ebb_A 13 EKADGWKLADERWIVK----KYRFQDYLQGIEFVRR 44 (101)
T ss_dssp HTSTTCEEETTTEEEE----EEECSSHHHHHHHHHH
T ss_pred hcCCCCeECCCCCEEE----EEEeCCHHHHHHHHHH
Confidence 467799888877 432 7899999999999765
No 33
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=33.40 E-value=23 Score=28.11 Aligned_cols=18 Identities=33% Similarity=0.619 Sum_probs=15.7
Q ss_pred CCHHHHHHHHHHcCCeEE
Q 032925 109 DSKEAAREFAERHGWEYV 126 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~ 126 (130)
..++++++||++||+.+.
T Consensus 194 ar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 194 MSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp CCHHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHcCCcEE
Confidence 468999999999999874
No 34
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=33.35 E-value=31 Score=23.04 Aligned_cols=26 Identities=8% Similarity=-0.259 Sum_probs=20.1
Q ss_pred eeeeCC-----HHHHHHHHHHcCCeEEEEEC
Q 032925 105 GLSFDS-----KEAAREFAERHGWEYVVSVY 130 (130)
Q Consensus 105 ~L~F~S-----kE~Aiafaek~Gw~Y~V~~~ 130 (130)
.+.+.- .++|++|-+++|..++|..|
T Consensus 67 ~v~l~G~~~~~~~~ai~~L~~~~v~vEvlg~ 97 (98)
T 3ced_A 67 VLHIPYISSVDFGKFEKELIERQVKMEVLRH 97 (98)
T ss_dssp EEEESCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 555542 57899999999999998754
No 35
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=32.29 E-value=22 Score=28.18 Aligned_cols=20 Identities=25% Similarity=0.597 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHcCCeEEEE
Q 032925 109 DSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+++-=++||++||++..+.
T Consensus 24 ksiKNK~DYArrHGYelfy~ 43 (213)
T 2p6w_A 24 KTKELVEEYCSIHGYNFYYE 43 (213)
T ss_dssp HHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEe
Confidence 35556678999999998874
No 36
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=31.61 E-value=35 Score=22.59 Aligned_cols=26 Identities=19% Similarity=0.106 Sum_probs=20.1
Q ss_pred eeeeC----CHHHHHHHHHHcCCeEEEEEC
Q 032925 105 GLSFD----SKEAAREFAERHGWEYVVSVY 130 (130)
Q Consensus 105 ~L~F~----SkE~Aiafaek~Gw~Y~V~~~ 130 (130)
.+.+. ..++|++|-+++|...+|..|
T Consensus 70 ~v~l~G~~~~~~~ai~~L~~~~v~vEvlg~ 99 (101)
T 2qrr_A 70 VAELFGNEQDDSAAIEYLRENNVKVEVLGY 99 (101)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 55554 347899999999999988653
No 37
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=31.37 E-value=22 Score=24.18 Aligned_cols=15 Identities=27% Similarity=0.346 Sum_probs=13.2
Q ss_pred eeCCHHHHHHHHHHc
Q 032925 107 SFDSKEAAREFAERH 121 (130)
Q Consensus 107 ~F~SkE~Aiafaek~ 121 (130)
.|+|.++|++.|+.+
T Consensus 114 i~~t~~~Al~~~~~~ 128 (135)
T 4dgf_A 114 VFDHIDKALAYAKLL 128 (135)
T ss_dssp BCSSHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHH
Confidence 699999999999864
No 38
>2hiq_A Hypothetical protein YDHR; hypothetical protein JW1657, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.58.4.12 PDB: 1wd6_A
Probab=31.09 E-value=19 Score=25.84 Aligned_cols=29 Identities=24% Similarity=0.491 Sum_probs=22.2
Q ss_pred ccCCCCccCCcCCceeeeCCHHHHHHHHHHc
Q 032925 91 WTSTGDPYANVGDAGLSFDSKEAAREFAERH 121 (130)
Q Consensus 91 WtsS~D~~sqv~~~~L~F~SkE~Aiafaek~ 121 (130)
||-+-|+.. .++ ..-|+|+++|.+|.+.|
T Consensus 48 Wte~e~t~~-aGG-iYLFes~~~AeaY~~~h 76 (113)
T 2hiq_A 48 WTESEKNHE-AGG-IYLFTDEKSALAYLEKH 76 (113)
T ss_dssp EEEETTTTE-EEE-EEEESSHHHHHHHHHHH
T ss_pred EEEcCCCCe-eeE-EEEeCCHHHHHHHHHHH
Confidence 777777753 333 67799999999999875
No 39
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=30.99 E-value=36 Score=25.80 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=25.6
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
...-++|||. .|++-..-++.|+++|++++|.
T Consensus 99 Va~l~~GDP~--------~~~~~~~l~~~l~~~gi~v~vi 130 (259)
T 2e0n_A 99 VAVVSVGDGG--------FYSTASAIIERARRDGLDCSMT 130 (259)
T ss_dssp EEEEESBCTT--------BSCTHHHHHHHHHTTTCCEEEE
T ss_pred EEEEeCCCCc--------ccccHHHHHHHHHHCCCCEEEe
Confidence 3445579996 5788888889999999999985
No 40
>3pxi_a Adapter protein MECA 1; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=30.38 E-value=23 Score=24.63 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=16.1
Q ss_pred eeeeCCHHHHHHHHHHcCC
Q 032925 105 GLSFDSKEAAREFAERHGW 123 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw 123 (130)
.+.|++.|+.|++|+ .+.
T Consensus 23 i~~F~dfEdvI~~A~-~~~ 40 (111)
T 3pxi_a 23 VLRFGDFEDVISLSK-LNV 40 (111)
T ss_dssp EEEESSTHHHHHHHT-SCC
T ss_pred EEEcCCHHHHHHHHc-CCC
Confidence 799999999999999 654
No 41
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=30.25 E-value=47 Score=22.44 Aligned_cols=24 Identities=21% Similarity=0.454 Sum_probs=21.4
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+..++.|+..+|++++|++|.+.
T Consensus 68 ~vs~d~~~~~~~~~~~~~~~~~~~ 91 (161)
T 3drn_A 68 GVSSDDINSHKRFKEKYKLPFILV 91 (161)
T ss_dssp EEESCCHHHHHHHHHHTTCCSEEE
T ss_pred EEeCCCHHHHHHHHHHhCCCceEE
Confidence 677899999999999999998764
No 42
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.98 E-value=47 Score=20.79 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=19.4
Q ss_pred eeCCHHHHHHHHHHcCCeEEEE
Q 032925 107 SFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 107 ~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+.+.+++.+++++.|+++.|.
T Consensus 30 ~~~~~~~~~~~~~~~~~P~vvK 51 (108)
T 2cqy_A 30 VVKDAEEAVRIAREIGYPVMIK 51 (108)
T ss_dssp CBSSHHHHHHHHHHHCSSEEEE
T ss_pred ccCCHHHHHHHHHhcCCCEEEE
Confidence 5678999999999999998876
No 43
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=29.73 E-value=41 Score=25.97 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=25.3
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
-.--++|||. -|+.--+-++.|+++|++++|.
T Consensus 79 Va~L~~GDP~--------iyg~~~~l~~~l~~~gi~vevi 110 (264)
T 3ndc_A 79 VARLHSGDLS--------IWSAMGEQLRRLRALNIPYDVT 110 (264)
T ss_dssp EEEEESBCTT--------SSCSHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCCCc--------cccHHHHHHHHHHhCCCCEEEe
Confidence 3456789996 5777777888899999999985
No 44
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=29.41 E-value=36 Score=22.70 Aligned_cols=25 Identities=12% Similarity=0.320 Sum_probs=21.3
Q ss_pred ceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 104 AGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 104 ~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
..+..++.++..+|++++|+.|.+.
T Consensus 74 v~is~d~~~~~~~~~~~~~~~~~~~ 98 (160)
T 1xvw_A 74 LAISVGPPPTHKIWATQSGFTFPLL 98 (160)
T ss_dssp EEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred EEEeCCCHHHHHHHHHhcCCCceEE
Confidence 3677899999999999999988764
No 45
>3e21_A HFAF1, FAS-associated factor 1; UBA, alternative splicing, apoptosis, nucleus, phosphoprotein; 1.73A {Homo sapiens}
Probab=28.77 E-value=20 Score=21.64 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=15.4
Q ss_pred CCHHHHHHHHHHcCCeEE
Q 032925 109 DSKEAAREFAERHGWEYV 126 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~ 126 (130)
+..+.|+.|-+.++|+++
T Consensus 19 ~d~~~A~~~Lea~nWDLe 36 (45)
T 3e21_A 19 ENIDEAITLLEQNNWDLV 36 (45)
T ss_dssp CCHHHHHHHHHHTTTCHH
T ss_pred CCHHHHHHHHHHcCCcHH
Confidence 456899999999999864
No 46
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=28.59 E-value=44 Score=22.49 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=21.1
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+..++.++..+|++++|+.|.+.
T Consensus 73 ~is~d~~~~~~~~~~~~~~~~~~l 96 (159)
T 2a4v_A 73 GLSADSVTSQKKFQSKQNLPYHLL 96 (159)
T ss_dssp EEESCCHHHHHHHHHHHTCSSEEE
T ss_pred EEeCCCHHHHHHHHHHhCCCceEE
Confidence 678899999999999999998764
No 47
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=28.47 E-value=15 Score=25.09 Aligned_cols=16 Identities=25% Similarity=0.071 Sum_probs=13.7
Q ss_pred eeeCCHHHHHHHHHHc
Q 032925 106 LSFDSKEAAREFAERH 121 (130)
Q Consensus 106 L~F~SkE~Aiafaek~ 121 (130)
-.|+|.++|+++|+.+
T Consensus 126 ~if~s~~~Al~~~~~~ 141 (143)
T 3llo_A 126 LLFHSIHDAVLGSQVR 141 (143)
T ss_dssp GEESSHHHHHHHTSSC
T ss_pred eEECcHHHHHHHHHhc
Confidence 3699999999999764
No 48
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=28.35 E-value=34 Score=22.28 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=19.8
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHH
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
+||+-.+|+.. + .-..+|++-.+|++|..+
T Consensus 1 ~gW~~~~~~~~-i-~r~f~F~~f~~a~~F~~~ 30 (80)
T 1usm_A 1 MDWEERENLKR-L-VKTFAFPNFREALDFANR 30 (80)
T ss_dssp CCCEEC---CC-E-EEEEECSSHHHHHHHHHH
T ss_pred CCCeEeCCccE-E-EEEEEeCCHHHHHHHHHH
Confidence 58887777432 2 137899999999999765
No 49
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=28.33 E-value=49 Score=22.60 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=21.0
Q ss_pred ceeeeCCHHHHHHHHHHcCC-eEEEE
Q 032925 104 AGLSFDSKEAAREFAERHGW-EYVVS 128 (130)
Q Consensus 104 ~~L~F~SkE~Aiafaek~Gw-~Y~V~ 128 (130)
..+..++.++..+|++++|+ .|.+.
T Consensus 83 v~Is~d~~~~~~~~~~~~~~~~~~~l 108 (171)
T 2yzh_A 83 TVVSMDLPFAQKRFCESFNIQNVTVA 108 (171)
T ss_dssp EEEESSCHHHHHHHHHHTTCCSSEEE
T ss_pred EEEeCCCHHHHHHHHHHcCCCCeEEe
Confidence 36778999999999999999 77764
No 50
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=27.91 E-value=38 Score=25.74 Aligned_cols=31 Identities=29% Similarity=0.360 Sum_probs=24.5
Q ss_pred CccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 90 GWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 90 GWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
..-++|||+ -|++--.-++.|+++|++++|.
T Consensus 81 ~~l~~GDP~--------i~~~~~~l~~~l~~~gi~vevi 111 (265)
T 2z6r_A 81 AFLTPGDPL--------VATTHAELRIRAKRAGVESYVI 111 (265)
T ss_dssp EEEESBCTT--------SSSSTHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCCc--------CCCCHHHHHHHHHHCCCcEEEE
Confidence 345689996 4677777888999999999985
No 51
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=27.82 E-value=46 Score=23.18 Aligned_cols=24 Identities=17% Similarity=0.315 Sum_probs=21.1
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+.-++.++..+|++++|++|.+.
T Consensus 72 ~is~d~~~~~~~~~~~~~~~fp~l 95 (164)
T 4gqc_A 72 AISVDSPWCLKKFKDENRLAFNLL 95 (164)
T ss_dssp EEESSCHHHHHHHHHHTTCCSEEE
T ss_pred EecCCCHHHHHHHHHhcCccccee
Confidence 566799999999999999999874
No 52
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=27.60 E-value=42 Score=22.61 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=23.2
Q ss_pred CCCcCccCCCC--ccCCcCCceeeeCCHHHHHHHHHH
Q 032925 86 NPLMGWTSTGD--PYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 86 nPLMGWtsS~D--~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
..|-||+-..| -+.. ..+|++-.+|++|..+
T Consensus 16 ~~l~gW~~~~~~~~l~r----~f~f~~f~~a~~f~~~ 48 (97)
T 3jst_A 16 RALDGWQKVDGREAITR----SFKFKDFSTAFGFMAQ 48 (97)
T ss_dssp HTSTTCEECTTSSCEEE----EEECSSHHHHHHHHHH
T ss_pred hcCCCCeEeCCCCeEEE----EEEeCCHHHHHHHHHH
Confidence 46789987744 3432 7899999999998765
No 53
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=27.57 E-value=47 Score=28.50 Aligned_cols=22 Identities=9% Similarity=0.173 Sum_probs=19.5
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
++.|...++.++||++||+...
T Consensus 242 ~~~f~~aD~~v~~A~~ngi~vr 263 (540)
T 2w5f_A 242 RVSLNRAASILNFCAQNNIAVR 263 (540)
T ss_dssp EECCTTTHHHHHHHHHTTCEEE
T ss_pred eechhHHHHHHHHHHHCCCEEE
Confidence 4789999999999999999863
No 54
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=27.52 E-value=34 Score=22.95 Aligned_cols=24 Identities=25% Similarity=0.562 Sum_probs=21.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+..++.++..+|++++|+.|.+.
T Consensus 74 ~vs~d~~~~~~~~~~~~~~~~~~~ 97 (163)
T 3gkn_A 74 GVSRDSVKSHDNFCAKQGFAFPLV 97 (163)
T ss_dssp EEESSCHHHHHHHHHHHCCSSCEE
T ss_pred EEeCCCHHHHHHHHHHhCCCceEE
Confidence 667899999999999999988764
No 55
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=27.48 E-value=45 Score=22.66 Aligned_cols=24 Identities=17% Similarity=0.254 Sum_probs=20.6
Q ss_pred eeeeCCHHHHHHHHHHcCC-eEEEE
Q 032925 105 GLSFDSKEAAREFAERHGW-EYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw-~Y~V~ 128 (130)
.+..++.++..+|++++|+ .|.+.
T Consensus 79 ~is~d~~~~~~~~~~~~~~~~~~~l 103 (163)
T 1psq_A 79 TVSMDLPFAQKRWCGAEGLDNAIML 103 (163)
T ss_dssp EEESSCHHHHHHHHHHHTCTTSEEE
T ss_pred EEECCCHHHHHHHHHhcCCCCcEEe
Confidence 6678999999999999999 88653
No 56
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=27.46 E-value=32 Score=22.98 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=25.1
Q ss_pred cCCCcCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCe
Q 032925 85 ENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWE 124 (130)
Q Consensus 85 ~nPLMGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~ 124 (130)
..|..||..-++---.+ .-.-.|-++|..+|+++|=.
T Consensus 8 ~~~~~~~~~~~~~CY~~---~~~~~~w~~A~~~C~~~g~~ 44 (133)
T 2zib_A 8 LVCPAGWTLHGQRCFYS---EATAMTWDLAEANCVNKGGH 44 (133)
T ss_dssp CCCCTTCEEETTEEEEE---EEEEECHHHHHHHHHHTTSE
T ss_pred eeCCCCEEEeCCEEEEE---ECCccCHHHHHHHHHHCCCE
Confidence 36788888877753222 11235789999999998843
No 57
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=27.39 E-value=36 Score=26.62 Aligned_cols=18 Identities=28% Similarity=0.582 Sum_probs=15.5
Q ss_pred CCHHHHHHHHHHcCCeEE
Q 032925 109 DSKEAAREFAERHGWEYV 126 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~ 126 (130)
..++++++||++||+.+.
T Consensus 176 ar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 176 AHTDELRVFADEHGLALI 193 (206)
T ss_dssp CCHHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHcCCcEE
Confidence 468999999999999864
No 58
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=27.17 E-value=31 Score=29.16 Aligned_cols=15 Identities=20% Similarity=0.339 Sum_probs=13.0
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|.-
T Consensus 153 ~r~Ae~~g~k~evl~ 167 (365)
T 1gqe_A 153 LRWAESRGFKTEIIE 167 (365)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCeEEEEe
Confidence 579999999999864
No 59
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=26.90 E-value=60 Score=22.19 Aligned_cols=24 Identities=8% Similarity=-0.026 Sum_probs=20.8
Q ss_pred eeeeCCHHHHHHHHHHcCC--eEEEE
Q 032925 105 GLSFDSKEAAREFAERHGW--EYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw--~Y~V~ 128 (130)
.+..++.++..+|++++|+ +|.+.
T Consensus 76 ~Is~d~~~~~~~~~~~~~~~~~~~~l 101 (162)
T 1tp9_A 76 CISVNDPFVMKAWAKSYPENKHVKFL 101 (162)
T ss_dssp EEESSCHHHHHHHHHTCTTCSSEEEE
T ss_pred EEECCCHHHHHHHHHhcCCCCCeEEE
Confidence 6778999999999999999 78764
No 60
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=26.85 E-value=70 Score=26.05 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=20.1
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
+..|...++.++||++||+...
T Consensus 78 ~~~f~~~D~~v~~a~~~gi~vr 99 (341)
T 3niy_A 78 RYNFTPAEKHVEFAEENNMIVH 99 (341)
T ss_dssp EEECHHHHHHHHHHHHTTCEEE
T ss_pred ccChHHHHHHHHHHHHCCCeEE
Confidence 6789999999999999999876
No 61
>1mwp_A Amyloid A4 protein; heparin binding, sugar binding protein; 1.80A {Homo sapiens} SCOP: d.170.2.1
Probab=26.83 E-value=34 Score=23.95 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=18.6
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVV 127 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V 127 (130)
.--|.++++.++||++.--+.+|
T Consensus 33 ~~C~~~k~eIL~YCrkvYP~l~I 55 (96)
T 1mwp_A 33 KTCIDTKEGILQYCQEVYPELQI 55 (96)
T ss_dssp CBCCCSHHHHHHHHHHHSTTSCE
T ss_pred ccccCChHHHHHHHHHHCCCCcc
Confidence 34788999999999998766654
No 62
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=26.73 E-value=33 Score=22.63 Aligned_cols=27 Identities=19% Similarity=-0.173 Sum_probs=20.4
Q ss_pred ceeeeC----CHHHHHHHHHHcCCeEEEEEC
Q 032925 104 AGLSFD----SKEAAREFAERHGWEYVVSVY 130 (130)
Q Consensus 104 ~~L~F~----SkE~Aiafaek~Gw~Y~V~~~ 130 (130)
+.+.+. ..++|++|.+++|...+|..|
T Consensus 69 L~v~l~G~~~~~~~ai~~L~~~~v~vEvlg~ 99 (100)
T 2qsw_A 69 LYIQLLGEEQNILAAIEGLRKLRVETEVIGN 99 (100)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCEEEESSC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCEEEEccC
Confidence 356554 367899999999999888543
No 63
>2ek1_A RNA-binding protein 12; RNA recognition motif, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} PDB: 2ek6_A
Probab=26.67 E-value=58 Score=20.03 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=16.8
Q ss_pred eeeeCCHHHHHHHHHH-cCCeE
Q 032925 105 GLSFDSKEAAREFAER-HGWEY 125 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~Y 125 (130)
-+.|.+.|+|.+-.+. ||..+
T Consensus 61 fV~f~~~~~a~~Ai~~l~g~~~ 82 (95)
T 2ek1_A 61 MVAFESRDEATAAVIDLNDRPI 82 (95)
T ss_dssp EEEESSHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHhCCCeE
Confidence 6899999999988875 66543
No 64
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=26.53 E-value=37 Score=25.71 Aligned_cols=46 Identities=24% Similarity=0.256 Sum_probs=27.3
Q ss_pred CCCcEEEecCCC-CccCC----CcCccCCCCccCCcCCceeeeCCHHHHHHHHHH
Q 032925 71 LGRWKINFMSTQ-KWENP----LMGWTSTGDPYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 71 t~~W~LeF~~~~-~w~nP----LMGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
.++.+|+..-.. -..++ +.-|.. .|..... -|.|.|+|||-+|++.
T Consensus 57 d~kvvinc~I~~~l~Y~kasp~FHqW~d-~~~~~v~---GLnF~Se~eA~~F~~~ 107 (168)
T 1i2h_A 57 GSKAIINSTITPNMTFTKTSQKFGQWAD-SRANTVY---GLGFSSEHHLSKFAEK 107 (168)
T ss_dssp TTEEEEEEECCTTCCEEEEETTEEEEEE-TTTTEEE---EEEESSHHHHHHHHHH
T ss_pred CCEEEEecEecCCcEEeeCCcccceeec-CCCcEEE---EeccCCHHHHHHHHHH
Confidence 457788876432 11122 222332 2322444 8999999999999875
No 65
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=26.13 E-value=58 Score=24.23 Aligned_cols=31 Identities=29% Similarity=0.295 Sum_probs=24.8
Q ss_pred CccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 90 GWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 90 GWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
..-.+|||. -|++--.-+++|+++|++++|.
T Consensus 79 ~~l~~GDP~--------i~~~~~~l~~~l~~~gi~v~vi 109 (239)
T 1va0_A 79 VRLKGGDPM--------VFGRGGEEVLFLLRHGVPVEVV 109 (239)
T ss_dssp EEEESBCTT--------SSSSHHHHHHHHHHTTCCEEEE
T ss_pred EEEeCCCCc--------cccCHHHHHHHHHHCCCcEEEE
Confidence 345679986 5777888888999999999885
No 66
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=25.86 E-value=25 Score=20.31 Aligned_cols=19 Identities=16% Similarity=0.057 Sum_probs=16.4
Q ss_pred eeeeCCHHHHHHHHHHcCC
Q 032925 105 GLSFDSKEAAREFAERHGW 123 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw 123 (130)
.|...+..+++.+|.++|+
T Consensus 40 kl~~~~~~~l~~~~~~~g~ 58 (61)
T 2jpc_A 40 KLQVHKVTELLNCARRMRL 58 (61)
T ss_dssp HHTCSSHHHHHHHHHCSCC
T ss_pred HHCCCCHHHHHHHHHHcCC
Confidence 4667899999999999987
No 67
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=25.65 E-value=47 Score=25.32 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=25.5
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
...-++|||. -|+.--+-++.|+++|++++|.
T Consensus 80 V~~l~~GDP~--------i~~~~~~l~~~l~~~gi~vevi 111 (253)
T 4e16_A 80 VVRLQTGDFS--------IYGSIREQVEDLNKLNIDYDCT 111 (253)
T ss_dssp EEEEESBCTT--------TTCCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEeCCCCc--------cccCHHHHHHHHHHCCCCEEEE
Confidence 4556789996 5777777788999999999885
No 68
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=25.31 E-value=40 Score=27.19 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=19.8
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
+..|...++.++||++||+...
T Consensus 83 ~~~f~~~D~~v~~a~~~gi~v~ 104 (347)
T 1xyz_A 83 VFDFSKGDQLLAFAERNGMQMR 104 (347)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEE
T ss_pred cCChHHHHHHHHHHHHCCCEEE
Confidence 5679999999999999999875
No 69
>3tbi_A RNA polymerase-associated protein GP33; transcription accessory protein, transcription; 3.00A {Enterobacteria phage T4}
Probab=24.97 E-value=28 Score=25.26 Aligned_cols=15 Identities=27% Similarity=0.240 Sum_probs=13.0
Q ss_pred HHHHHHHHHHcCCeE
Q 032925 111 KEAAREFAERHGWEY 125 (130)
Q Consensus 111 kE~Aiafaek~Gw~Y 125 (130)
.|+++.|||.|++++
T Consensus 59 LEA~~~w~EEnsIe~ 73 (115)
T 3tbi_A 59 LEATTAFLEENSIPE 73 (115)
T ss_dssp HHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHcCCCH
Confidence 588999999999875
No 70
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3
Probab=24.96 E-value=31 Score=26.92 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=19.7
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
+..|...++.++||++||+...
T Consensus 57 ~~~~~~~D~~v~~a~~~gi~v~ 78 (302)
T 1nq6_A 57 SFSFSAADRIVSHAQSKGMKVR 78 (302)
T ss_dssp BCCCHHHHHHHHHHHHHTCEEE
T ss_pred cCCcHHHHHHHHHHHHCCCEEE
Confidence 5678899999999999999975
No 71
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=24.89 E-value=53 Score=25.12 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=19.4
Q ss_pred eCCHHHHHHHHHHcCCeEEEEE
Q 032925 108 FDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 108 F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
++..|+|...+++.|++|+|.+
T Consensus 25 ~~v~~~a~~~l~~~gi~~ev~V 46 (173)
T 4grd_A 25 WDVMKHAVAILQEFGVPYEAKV 46 (173)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEE
Confidence 4567999999999999999976
No 72
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=24.73 E-value=51 Score=25.56 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=24.9
Q ss_pred cCccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 89 MGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 89 MGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
..--++|||+ -|++--.=+++|+++|++++|.
T Consensus 95 Vv~L~~GDP~--------i~g~g~~l~~~l~~~gi~vevi 126 (280)
T 1s4d_A 95 VLRLKGGDPF--------VFGRGGEEALTLVEHQVPFRIV 126 (280)
T ss_dssp EEEEESBCTT--------SSSSHHHHHHHHHTTTCCEEEE
T ss_pred EEEEcCCCCc--------cccCHHHHHHHHHHCCCCEEEE
Confidence 3445568886 4777777789999999999985
No 73
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=24.53 E-value=54 Score=25.26 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=19.2
Q ss_pred eCCHHHHHHHHHHcCCeEEEEE
Q 032925 108 FDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 108 F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
.+..|+|.+.+++.|++|++.+
T Consensus 35 ~~v~~~a~~~L~~~gI~~e~~V 56 (181)
T 4b4k_A 35 WETMKYACDILDELNIPYEKKV 56 (181)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeeEEE
Confidence 3457899999999999999976
No 74
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=24.29 E-value=33 Score=28.98 Aligned_cols=15 Identities=40% Similarity=0.612 Sum_probs=13.1
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|.-
T Consensus 141 ~r~Ae~~g~k~evl~ 155 (365)
T 2ihr_1 141 TRFAERQGFQVEVVD 155 (365)
T ss_dssp HHHHHTTTCEEEEEE
T ss_pred HHHHHHcCCeEEEEe
Confidence 579999999999864
No 75
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=24.28 E-value=70 Score=19.20 Aligned_cols=20 Identities=15% Similarity=0.297 Sum_probs=16.4
Q ss_pred eeeeCCHHHHHHHHHH-cCCe
Q 032925 105 GLSFDSKEAAREFAER-HGWE 124 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~ 124 (130)
-+.|.+.|+|.+-.+. ||..
T Consensus 51 fV~f~~~~~a~~A~~~l~g~~ 71 (88)
T 4a8x_A 51 YVEFENPDEAEKALKHMDGGQ 71 (88)
T ss_dssp EEEESSHHHHHHHHHHHTTCE
T ss_pred EEEEecHHHHHHHHHHcCCCe
Confidence 6899999999988875 6654
No 76
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=24.24 E-value=35 Score=28.76 Aligned_cols=15 Identities=40% Similarity=0.417 Sum_probs=13.0
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|..
T Consensus 132 ~r~ae~~g~k~ev~~ 146 (354)
T 3d5a_X 132 LRFAEEMGFETEVLD 146 (354)
T ss_dssp HHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCeEEEEe
Confidence 579999999999864
No 77
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=24.14 E-value=61 Score=22.73 Aligned_cols=24 Identities=8% Similarity=0.187 Sum_probs=20.8
Q ss_pred eeeeCCHHHHHHHHHHcCCe--EEEE
Q 032925 105 GLSFDSKEAAREFAERHGWE--YVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~--Y~V~ 128 (130)
-+..++.++..+|++++|++ |.+.
T Consensus 72 ~Is~d~~~~~~~~~~~~~~~~~fp~l 97 (167)
T 2wfc_A 72 CMAVNDSFVMDAWGKAHGADDKVQML 97 (167)
T ss_dssp EEESSCHHHHHHHHHHTTCTTTSEEE
T ss_pred EEeCCCHHHHHHHHHhcCCCcceEEE
Confidence 66789999999999999998 8764
No 78
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=24.02 E-value=35 Score=28.93 Aligned_cols=15 Identities=33% Similarity=0.902 Sum_probs=13.1
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|..
T Consensus 150 ~r~Ae~~g~kvevl~ 164 (371)
T 1zbt_A 150 QKYAENQGWKFEVME 164 (371)
T ss_dssp HHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCeEEEEe
Confidence 579999999999864
No 79
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A
Probab=23.73 E-value=54 Score=26.74 Aligned_cols=22 Identities=14% Similarity=0.225 Sum_probs=19.7
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
...|...+..++||++||+...
T Consensus 58 ~~~f~~aD~~v~~a~~ngi~vr 79 (341)
T 3ro8_A 58 NFTFTAADAMIDKVLAEGMKMH 79 (341)
T ss_dssp BCCCHHHHHHHHHHHHTTCEEE
T ss_pred ccchHHHHHHHHHHHhCCCEEE
Confidence 5689999999999999999864
No 80
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=23.72 E-value=58 Score=21.43 Aligned_cols=24 Identities=17% Similarity=0.422 Sum_probs=21.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
.+..++.++..+|++++|+.|.+.
T Consensus 62 ~v~~d~~~~~~~~~~~~~~~~~~~ 85 (151)
T 3raz_A 62 GIALDTSDNIGNFLKQTPVSYPIW 85 (151)
T ss_dssp EEESSCHHHHHHHHHHSCCSSCEE
T ss_pred EEECCChHHHHHHHHHcCCCCceE
Confidence 677899999999999999988654
No 81
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1
Probab=23.69 E-value=64 Score=25.16 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=24.3
Q ss_pred ccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 91 WTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 91 WtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
--++|||+ -|++--.=+..|+++|++++|.
T Consensus 88 ~L~~GDP~--------v~g~~~~l~~~l~~~gi~vevi 117 (294)
T 1wde_A 88 VVTAGDPM--------VATTHSSLAAEALEAGVAVRYI 117 (294)
T ss_dssp EEESBCTT--------SSSSHHHHHHHHHHTTCEEEEE
T ss_pred EEeCCCCc--------cccCHHHHHHHHHHCCCCEEEE
Confidence 45679997 4777777788999999999885
No 82
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=23.66 E-value=64 Score=23.96 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=24.6
Q ss_pred CccCCCCccCCcCCceeeeCCHHHHHHHHHHcCCeEEEE
Q 032925 90 GWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 90 GWtsS~D~~sqv~~~~L~F~SkE~Aiafaek~Gw~Y~V~ 128 (130)
..-.+|||. -|++--.-++.|+++|++++|.
T Consensus 82 ~~l~~GDP~--------i~~~~~~l~~~l~~~gi~v~vi 112 (235)
T 1ve2_A 82 ARLKGGDPM--------VFGRGGEEALALRRAGIPFEVV 112 (235)
T ss_dssp EEEESBCTT--------SSTTHHHHHHHHHHHTCCEEEE
T ss_pred EEEcCCCCC--------cccCHHHHHHHHHHCCCCEEEE
Confidence 344678986 4777778888899999999885
No 83
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=23.22 E-value=51 Score=26.28 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=16.2
Q ss_pred eCCHHHHHHHHHHcCCeEE
Q 032925 108 FDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 108 F~SkE~Aiafaek~Gw~Y~ 126 (130)
-..++++++||++||+++.
T Consensus 193 mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 193 MLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp ECCHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHHcCCcEE
Confidence 4578999999999999864
No 84
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=23.13 E-value=68 Score=21.81 Aligned_cols=24 Identities=17% Similarity=0.207 Sum_probs=20.6
Q ss_pred eeeeCCHHHHHHHHHHcCC-eEEEE
Q 032925 105 GLSFDSKEAAREFAERHGW-EYVVS 128 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw-~Y~V~ 128 (130)
.+..++.++..+|++++|+ .|.+.
T Consensus 82 ~is~d~~~~~~~~~~~~~~~~~~~l 106 (166)
T 3p7x_A 82 TISADLPFAQKRWCASAGLDNVITL 106 (166)
T ss_dssp EEESSCHHHHHHHHHHHTCSSCEEE
T ss_pred EEECCCHHHHHHHHHHcCCCceEEc
Confidence 5678999999999999999 78764
No 85
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.03 E-value=42 Score=26.21 Aligned_cols=18 Identities=17% Similarity=0.421 Sum_probs=15.4
Q ss_pred CCHHHHHHHHHHcCCeEE
Q 032925 109 DSKEAAREFAERHGWEYV 126 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~ 126 (130)
..++++++||++||+++.
T Consensus 176 ar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 176 MRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CBHHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHcCCcEE
Confidence 467999999999999864
No 86
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=22.96 E-value=81 Score=26.25 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=19.1
Q ss_pred eeeeCCHHHHHHHHHHcCCeEEEEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
...|. .++..+||++||++..|..
T Consensus 244 g~~FG-~~~~~~Fl~~n~l~~IiRa 267 (357)
T 3ll8_A 244 SYFYS-YPAVCEFLQHNNLLSILRA 267 (357)
T ss_dssp SEEEC-HHHHHHHHHHTTCSEEEEC
T ss_pred ceEEC-hHHHHHHHHHCCCeEEEEe
Confidence 55665 6677899999999998863
No 87
>2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A*
Probab=22.90 E-value=49 Score=22.63 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=24.1
Q ss_pred CCCcCccCCCCccCCcCCceeeeCCHHHHHHHHHH
Q 032925 86 NPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAER 120 (130)
Q Consensus 86 nPLMGWtsS~D~~sqv~~~~L~F~SkE~Aiafaek 120 (130)
..|-||+-.+|+. .+ .-..+|++-.+|++|..+
T Consensus 19 ~~l~gW~~~~~~~-~i-~r~f~F~~f~~a~~F~~~ 51 (104)
T 2v6u_A 19 KTVPQWHLTDGHL-SI-KRKFQFSDFNEAWGFMSR 51 (104)
T ss_dssp TTSTTSEECGGGC-CE-EEEEECSSHHHHHHHHHH
T ss_pred hcCCCCeEeCCcC-eE-EEEEEeCCHHHHHHHHHH
Confidence 4677998877752 12 237899999999998765
No 88
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A
Probab=22.86 E-value=38 Score=28.38 Aligned_cols=15 Identities=40% Similarity=0.866 Sum_probs=13.0
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|..
T Consensus 113 ~r~ae~~g~kvevl~ 127 (342)
T 1rq0_A 113 TRYAERKGWNLEVAE 127 (342)
T ss_dssp HHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCeEEEEe
Confidence 579999999999864
No 89
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=22.59 E-value=82 Score=18.71 Aligned_cols=20 Identities=25% Similarity=0.401 Sum_probs=16.3
Q ss_pred eeeeCCHHHHHHHHHH-cCCe
Q 032925 105 GLSFDSKEAAREFAER-HGWE 124 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~ 124 (130)
-+.|.+.|+|.+-.+. +|..
T Consensus 47 fV~f~~~~~a~~a~~~l~g~~ 67 (83)
T 3md1_A 47 FVSFTSQDDAQNAMDSMQGQD 67 (83)
T ss_dssp EEEESCHHHHHHHHHHHTTCE
T ss_pred EEEECCHHHHHHHHHHhcCCe
Confidence 6799999999988875 6654
No 90
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=22.53 E-value=75 Score=20.01 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=16.9
Q ss_pred eeeeCCHHHHHHHHHH-cCCeE
Q 032925 105 GLSFDSKEAAREFAER-HGWEY 125 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~Y 125 (130)
-+.|.+.|+|.+-.++ +|..+
T Consensus 74 fV~f~~~~~a~~A~~~l~g~~~ 95 (107)
T 3ulh_A 74 DVHFERKADALKAMKQYNGVPL 95 (107)
T ss_dssp EEEESSHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHhCCCEe
Confidence 6799999999988875 76543
No 91
>4a56_A PULS, pullulanase secretion protein PULS; protein transport, T2SS; 1.24A {Klebsiella oxytoca}
Probab=22.48 E-value=35 Score=23.62 Aligned_cols=13 Identities=31% Similarity=0.713 Sum_probs=11.7
Q ss_pred HHHHHHHHcCCeE
Q 032925 113 AAREFAERHGWEY 125 (130)
Q Consensus 113 ~Aiafaek~Gw~Y 125 (130)
.|+.||+++||+-
T Consensus 38 ~a~~~A~~~~Wd~ 50 (93)
T 4a56_A 38 AAINVGKKRGWAN 50 (93)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHHcCCCh
Confidence 7999999999974
No 92
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=22.35 E-value=25 Score=29.50 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=16.9
Q ss_pred eeCCHHHHHHHHHHcCCeEE
Q 032925 107 SFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 107 ~F~SkE~Aiafaek~Gw~Y~ 126 (130)
.|.+|++-++||+++|++|.
T Consensus 154 ~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 154 RFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp TCC-CHHHHHHHHHTTCCCC
T ss_pred cCCCHHHHHHHHHHcCCCee
Confidence 46699999999999999885
No 93
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=22.17 E-value=81 Score=18.90 Aligned_cols=20 Identities=25% Similarity=0.049 Sum_probs=16.1
Q ss_pred eeeeCCHHHHHHHHHH-cCCe
Q 032925 105 GLSFDSKEAAREFAER-HGWE 124 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~ 124 (130)
-+.|.+.|+|.+-.+. ||..
T Consensus 52 fV~f~~~~~A~~A~~~l~g~~ 72 (87)
T 3bs9_A 52 FVSFFNKWDAENAIQQMGGQW 72 (87)
T ss_dssp EEEESSHHHHHHHHHHHTTCE
T ss_pred EEEECCHHHHHHHHHHcCCCE
Confidence 6799999999988875 6543
No 94
>3sol_A Type II secretion pathway related protein; general secretory pathway, protein transport, pilotin; 1.90A {Escherichia coli}
Probab=21.81 E-value=41 Score=23.36 Aligned_cols=13 Identities=31% Similarity=0.619 Sum_probs=11.7
Q ss_pred HHHHHHHHcCCeE
Q 032925 113 AAREFAERHGWEY 125 (130)
Q Consensus 113 ~Aiafaek~Gw~Y 125 (130)
.|+.||+++||+-
T Consensus 38 ~a~~~A~~~gWD~ 50 (94)
T 3sol_A 38 VANRIAIGKGWQS 50 (94)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHHcCCCh
Confidence 7999999999973
No 95
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=21.44 E-value=57 Score=21.46 Aligned_cols=20 Identities=10% Similarity=0.130 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHcCCeEEEE
Q 032925 109 DSKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 109 ~SkE~Aiafaek~Gw~Y~V~ 128 (130)
++.++..+|++++|+.|.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ 97 (158)
T 3eyt_A 78 MTPISLKAFLHEYRIKFPVG 97 (158)
T ss_dssp SCHHHHHHHHHHTTCCSCEE
T ss_pred CCHHHHHHHHHHcCCCceEE
Confidence 59999999999999998653
No 96
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=21.37 E-value=84 Score=19.32 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=16.3
Q ss_pred eeeeCCHHHHHHHHHH-cCCe
Q 032925 105 GLSFDSKEAAREFAER-HGWE 124 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~ 124 (130)
-+.|.+.|+|..-.+. ||..
T Consensus 55 fV~f~~~~~A~~A~~~l~g~~ 75 (97)
T 1nu4_A 55 FVIFKEVSSATNALRSMQGFP 75 (97)
T ss_dssp EEEESSHHHHHHHHHHHTTCE
T ss_pred EEEeCCHHHHHHHHHHhCCCE
Confidence 6799999999988875 6654
No 97
>2cpe_A RNA-binding protein EWS; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.26 E-value=80 Score=20.15 Aligned_cols=21 Identities=19% Similarity=0.428 Sum_probs=16.9
Q ss_pred eeeeCCHHHHHHHHHH-cCCeE
Q 032925 105 GLSFDSKEAAREFAER-HGWEY 125 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~Y 125 (130)
-+.|.+.|+|.+-.+. ||..+
T Consensus 69 fV~f~~~~~A~~Ai~~l~g~~~ 90 (113)
T 2cpe_A 69 TVSYEDPPTAKAAVEWFDGKDF 90 (113)
T ss_dssp EEEBSSHHHHHHHHHHHTTCEE
T ss_pred EEEECCHHHHHHHHHHcCCCcc
Confidence 6899999999988875 66543
No 98
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=20.92 E-value=71 Score=24.41 Aligned_cols=22 Identities=14% Similarity=0.175 Sum_probs=19.1
Q ss_pred eCCHHHHHHHHHHcCCeEEEEE
Q 032925 108 FDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 108 F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
.+.-|+|...+++.|++|+|.+
T Consensus 25 ~~v~~~a~~~L~~~Gi~~ev~V 46 (174)
T 3kuu_A 25 WATMQFAADVLTTLNVPFHVEV 46 (174)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEE
Confidence 3457899999999999999976
No 99
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=20.72 E-value=73 Score=24.27 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=19.2
Q ss_pred eCCHHHHHHHHHHcCCeEEEEE
Q 032925 108 FDSKEAAREFAERHGWEYVVSV 129 (130)
Q Consensus 108 F~SkE~Aiafaek~Gw~Y~V~~ 129 (130)
.+..|+|...+++.|++|+|.+
T Consensus 24 ~~v~~~a~~~L~~~Gi~~dv~V 45 (170)
T 1xmp_A 24 WETMKYACDILDELNIPYEKKV 45 (170)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEE
Confidence 3557899999999999999976
No 100
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=20.66 E-value=60 Score=26.46 Aligned_cols=22 Identities=32% Similarity=0.309 Sum_probs=20.0
Q ss_pred eeeeCCHHHHHHHHHHcCCeEE
Q 032925 105 GLSFDSKEAAREFAERHGWEYV 126 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek~Gw~Y~ 126 (130)
+..|...++.++||++||+...
T Consensus 61 ~~~f~~aD~~v~~a~~~gi~vr 82 (335)
T 4f8x_A 61 VFNFTEGEQFLEVAERFGSKVR 82 (335)
T ss_dssp EECCHHHHHHHHHHHHTTCEEE
T ss_pred ccCcchhHHHHHHHHHCCCEEE
Confidence 6789999999999999999865
No 101
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=20.52 E-value=45 Score=22.50 Aligned_cols=14 Identities=14% Similarity=0.181 Sum_probs=12.1
Q ss_pred HHHHHHHHHHcCCe
Q 032925 111 KEAAREFAERHGWE 124 (130)
Q Consensus 111 kE~Aiafaek~Gw~ 124 (130)
-++|-+||++|+++
T Consensus 42 ~~aAqkFi~~n~Lp 55 (80)
T 2k89_A 42 WLTAYNFLQKNDLN 55 (80)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 36899999999986
No 102
>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1
Probab=20.41 E-value=33 Score=28.95 Aligned_cols=15 Identities=20% Similarity=0.503 Sum_probs=12.8
Q ss_pred HHHHHHcCCeEEEEE
Q 032925 115 REFAERHGWEYVVSV 129 (130)
Q Consensus 115 iafaek~Gw~Y~V~~ 129 (130)
..||+++||.++|..
T Consensus 136 ~r~ae~~g~k~ev~~ 150 (360)
T 2b3t_B 136 SRYAEARRWRVEIMS 150 (360)
T ss_dssp HHHHHHTTCCCCEEE
T ss_pred HHHHHHcCCeEEEEe
Confidence 579999999999864
No 103
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.16 E-value=79 Score=19.43 Aligned_cols=20 Identities=20% Similarity=0.079 Sum_probs=15.9
Q ss_pred eeeeCCHHHHHHHHHH-cCCe
Q 032925 105 GLSFDSKEAAREFAER-HGWE 124 (130)
Q Consensus 105 ~L~F~SkE~Aiafaek-~Gw~ 124 (130)
-+.|.+.|+|.+-.+. ||..
T Consensus 48 fV~f~~~~~a~~A~~~l~g~~ 68 (92)
T 2dgt_A 48 FVHMERAEDAVEAIRGLDNTE 68 (92)
T ss_dssp EEEESCHHHHHHHHHHHTTEE
T ss_pred EEEECCHHHHHHHHHHhCCCe
Confidence 6799999999988865 6543
No 104
>1t0f_A Transposon TN7 transposition protein TNSA; protein-protein complex, mixed alpha-beta, DNA binding protein; 1.85A {Escherichia coli} SCOP: a.4.5.27 c.52.1.16 PDB: 1f1z_A
Probab=20.09 E-value=61 Score=25.47 Aligned_cols=19 Identities=11% Similarity=0.212 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHcCCeEEEE
Q 032925 110 SKEAAREFAERHGWEYVVS 128 (130)
Q Consensus 110 SkE~Aiafaek~Gw~Y~V~ 128 (130)
-.|.+-+||+++||+|.|.
T Consensus 148 k~eier~y~~~~Gi~~~Iv 166 (276)
T 1t0f_A 148 KLELERRYWQQKQIPWFIF 166 (276)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEE
Confidence 3466789999999999985
Done!