Query 032926
Match_columns 130
No_of_seqs 104 out of 693
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 12:17:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ong_A 4S-limonene synthase; m 100.0 1.5E-50 5.2E-55 347.9 12.7 129 1-130 115-244 (543)
2 2j5c_A 1,8-cineole synthase; t 100.0 3.8E-50 1.3E-54 347.1 11.3 128 1-130 142-271 (569)
3 3n0f_A Isoprene synthase; terp 100.0 5.3E-50 1.8E-54 345.4 11.5 129 1-130 125-253 (555)
4 1n1b_A (+)-bornyl diphosphate 100.0 5.6E-50 1.9E-54 344.9 11.5 130 1-130 118-250 (549)
5 3g4d_A (+)-delta-cadinene synt 100.0 1.7E-49 5.7E-54 342.3 12.6 128 1-130 128-255 (554)
6 3m00_A Aristolochene synthase; 100.0 4.7E-49 1.6E-53 339.2 12.7 128 1-130 123-251 (550)
7 3p5p_A Taxadiene synthase; cla 100.0 7.1E-47 2.4E-51 335.4 13.7 130 1-130 313-458 (764)
8 3s9v_A Abietadiene synthase, c 100.0 1.1E-46 3.8E-51 334.9 14.1 130 1-130 337-487 (785)
9 3sdr_A Alpha-bisabolene syntha 100.0 2E-46 6.7E-51 334.4 12.2 130 1-130 365-515 (817)
10 3pya_A ENT-copalyl diphosphate 100.0 1.5E-44 5.2E-49 318.9 12.9 129 1-130 312-462 (727)
11 2zzr_A Unsaturated glucuronyl 28.4 79 0.0027 25.7 4.9 31 24-58 252-282 (397)
12 3td7_A FAD-linked sulfhydryl o 26.8 29 0.00099 27.6 1.9 21 69-94 274-294 (295)
13 4emt_A Transmembrane protein 1 24.3 59 0.002 24.2 3.1 42 19-61 104-148 (188)
14 1xkm_B Distinctin chain B; por 22.3 34 0.0012 17.1 1.0 10 87-96 7-16 (26)
15 4ef4_A Transmembrane protein 1 20.9 72 0.0025 24.9 3.1 42 19-61 143-187 (265)
16 2bnk_A Early protein GP16.7; D 20.7 48 0.0016 20.3 1.6 17 25-41 10-26 (67)
17 2h6l_A Hypothetical protein; N 20.4 55 0.0019 22.5 2.2 19 36-54 14-33 (146)
No 1
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=1.5e-50 Score=347.88 Aligned_cols=129 Identities=33% Similarity=0.559 Sum_probs=124.8
Q ss_pred CChHhhhccccCCccccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCC-CccHHHHHHHhcCCc
Q 032926 1 MSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQV-NSTFAEQIRHSLRVP 79 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~-~~~l~~~V~~aL~~P 79 (130)
||||||++|+|++|+|++++.+||+|||+|||||||++|||+|||+|+.||+++|++.+.++ + +++|+++|++||++|
T Consensus 115 vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~-~~~~~l~~~V~~aL~~P 193 (543)
T 2ong_A 115 VAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETTLESAREFATKFLEEKVNEG-GVDGDLLTRIAYSLDIP 193 (543)
T ss_dssp CCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHSS-CSSSHHHHHHHHHHHSC
T ss_pred ccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhcc-CCCCcHHHHHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999999999842 5 788999999999999
Q ss_pred ccchhhhHHHhhhhhhcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 80 LRRAVSRLESRYFLDIYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 80 ~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
|||++||+|||+||++|++++++|+.||||||+|||+||++||+||++++|
T Consensus 194 ~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~r 244 (543)
T 2ong_A 194 LHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQEELKESFR 244 (543)
T ss_dssp TTTSCSTTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccchHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999985
No 2
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=3.8e-50 Score=347.12 Aligned_cols=128 Identities=38% Similarity=0.568 Sum_probs=122.6
Q ss_pred CChHhhhccccCCc-cccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCC-CccHHHHHHHhcCC
Q 032926 1 MSCDVFEKFKDDDG-KFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQV-NSTFAEQIRHSLRV 78 (130)
Q Consensus 1 VSsDvf~~F~d~~g-~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~-~~~l~~~V~~aL~~ 78 (130)
||||||++|+|++| +|++++.+||+|||+|||||||++|||+|||+|+.||+++|++.+. ++ +++|+++|++||++
T Consensus 142 Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~gE~iLdeA~~Ft~~~L~~~~~--~~~~~~l~~~V~~aL~~ 219 (569)
T 2j5c_A 142 VSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLARDFATKFLQKRVL--VDKDINLLSSIERALEL 219 (569)
T ss_dssp CCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHTTSSCC------CHHHHHHHHHHHHS
T ss_pred cCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHh--hcCCCcHHHHHHHHhcC
Confidence 89999999999999 9999999999999999999999999999999999999999999987 45 78899999999999
Q ss_pred cccchhhhHHHhhhhhhcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 79 PLRRAVSRLESRYFLDIYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 79 P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
||||++||+|||+||+.|++++++|+.||||||+|||+||++||+||++++|
T Consensus 220 P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~r 271 (569)
T 2j5c_A 220 PTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQFQQELKEASR 271 (569)
T ss_dssp CGGGCCSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999985
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=5.3e-50 Score=345.43 Aligned_cols=129 Identities=40% Similarity=0.712 Sum_probs=124.1
Q ss_pred CChHhhhccccCCccccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHhcCCcc
Q 032926 1 MSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQVNSTFAEQIRHSLRVPL 80 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~ 80 (130)
||||||++|+|++|+|++++.+||+|||+|||||||++|||+|||+|+.||+++|++.+.+ .++++|+++|++||++||
T Consensus 125 VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~gE~iLdeA~~Fs~~~L~~~~~~-~~~~~l~~~V~~aL~~P~ 203 (555)
T 3n0f_A 125 VSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEGENILDEARVFAISHLKELSEE-KIGKELAEQVNHALELPL 203 (555)
T ss_dssp CCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHTCCHH-HHCHHHHHHHHHHHHSCT
T ss_pred cChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHhcCCc
Confidence 8999999999999999999999999999999999999999999999999999999997753 457889999999999999
Q ss_pred cchhhhHHHhhhhhhcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 81 RRAVSRLESRYFLDIYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 81 h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
||++||+|||+||++|++++++|+.||||||+|||+||++||+||++++|
T Consensus 204 ~~~l~Rlear~yI~~Y~~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 253 (555)
T 3n0f_A 204 HRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRETSR 253 (555)
T ss_dssp TTSCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999985
No 4
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=5.6e-50 Score=344.88 Aligned_cols=130 Identities=41% Similarity=0.674 Sum_probs=123.3
Q ss_pred CChHhhhccccCCc-cccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcC-CC-CccHHHHHHHhcC
Q 032926 1 MSCDVFEKFKDDDG-KFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNS-QV-NSTFAEQIRHSLR 77 (130)
Q Consensus 1 VSsDvf~~F~d~~g-~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~-~~-~~~l~~~V~~aL~ 77 (130)
||||||++|+|++| +|++++.+||+|||+||||||+++|||+|||+|+.||+++|++.+.++ .+ +++|+++|++||+
T Consensus 118 Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~~~~~~~~l~~~V~~aL~ 197 (549)
T 1n1b_A 118 ISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDENLLLWIRHSLD 197 (549)
T ss_dssp CCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHTC------CHHHHHHHHHHHH
T ss_pred cCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhcccccCCCcHHHHHHHHhc
Confidence 89999999999999 999999999999999999999999999999999999999999998742 14 7889999999999
Q ss_pred CcccchhhhHHHhhhhhhcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 78 VPLRRAVSRLESRYFLDIYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 78 ~P~h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
+||||++||+|||+||++|++++++|+.||||||+|||+||++||+||++++|
T Consensus 198 ~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~r 250 (549)
T 1n1b_A 198 LPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQATHQQELKDLSR 250 (549)
T ss_dssp SCGGGCCTTTSHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhcCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985
No 5
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=1.7e-49 Score=342.28 Aligned_cols=128 Identities=50% Similarity=0.880 Sum_probs=124.7
Q ss_pred CChHhhhccccCCccccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHhcCCcc
Q 032926 1 MSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQVNSTFAEQIRHSLRVPL 80 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~ 80 (130)
||||||++|+|++|+|++++.+||+|||+|||||||++|||+|||+|+.||+++|++.+. .++++|+++|++||++||
T Consensus 128 VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs~l~~~gE~iLdeA~~fs~~~L~~~~~--~~~~~l~~~V~~aL~~P~ 205 (554)
T 3g4d_A 128 VSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVA--SLDHPLSEEVSHALKQSI 205 (554)
T ss_dssp CCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHST--TCCTTHHHHHHHHHHCCT
T ss_pred CChhHHhhhcccCCCcccccccchHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh--ccCchHHHHHHHHhCCCc
Confidence 899999999999999999999999999999999999999999999999999999999987 578889999999999999
Q ss_pred cchhhhHHHhhhhhhcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 81 RRAVSRLESRYFLDIYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 81 h~~l~Rlear~yI~~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
||++||+||||||++|++++.+|+.||+|||+|||+||++||+||++++|
T Consensus 206 ~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~r 255 (554)
T 3g4d_A 206 RRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEICR 255 (554)
T ss_dssp TTSCHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHhCcCccccHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999985
No 6
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=4.7e-49 Score=339.24 Aligned_cols=128 Identities=43% Similarity=0.823 Sum_probs=124.4
Q ss_pred CChHhhhccccCCccccccchhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHhcCCcc
Q 032926 1 MSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQVNSTFAEQIRHSLRVPL 80 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~~~~l~~~V~~aL~~P~ 80 (130)
||||||++|+|++|+|++++.+|++|||+||||||+++|||+|||+|+.||+++|++.++ +++++|+++|.+||++||
T Consensus 123 VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~gE~iLdeA~~fs~~~L~~~~~--~~~~~l~~~V~~aL~~P~ 200 (550)
T 3m00_A 123 ISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAP--HLKSPLREQVTHALEQCL 200 (550)
T ss_dssp CCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCGGGTTHHHHHHHHHHHHGG--GCCTTHHHHHHHHHHSCS
T ss_pred CChHHhhhccccCCCccccchhchHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh--ccCccHHHHHHHHhCCCc
Confidence 899999999999999999999999999999999999999999999999999999999986 567889999999999999
Q ss_pred cchhhhHHHhhhhh-hcCCCCcccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 81 RRAVSRLESRYFLD-IYPRDDLHDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 81 h~~l~Rlear~yI~-~Y~~~~~~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
||++||+||||||+ +|++++.+|+.||+|||+|||+||++||+||++++|
T Consensus 201 ~~~l~rlear~yI~~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~r 251 (550)
T 3m00_A 201 HKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSR 251 (550)
T ss_dssp TTSCHHHHHHHHHHHTGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999 999999999999999999999999999999999985
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=7.1e-47 Score=335.38 Aligned_cols=130 Identities=31% Similarity=0.580 Sum_probs=122.1
Q ss_pred CChHhhhccccCCcccccc---chhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhc-CCCCccHHHHHHHhc
Q 032926 1 MSCDVFEKFKDDDGKFKAS---LTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSN-SQVNSTFAEQIRHSL 76 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~---~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~-~~~~~~l~~~V~~aL 76 (130)
||||||++|+|++|+|+++ +.+|++|||+|||||||++|||+|||+|+.||+++|++.+.+ +.++++|+++|++||
T Consensus 313 VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~L~~eV~~aL 392 (764)
T 3p5p_A 313 VSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVV 392 (764)
T ss_dssp CCGGGGGGGBCTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCSSSHHHHHHHHHH
T ss_pred ccHhHHHhhhcCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHh
Confidence 8999999999999999974 689999999999999999999999999999999999998864 235788999999999
Q ss_pred CCcccchhhhHHHhhhhhhcCCCCcc------------cHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 77 RVPLRRAVSRLESRYFLDIYPRDDLH------------DQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 77 ~~P~h~~l~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
++|||+++||+|||+||++|++++.| |+.||||||+|||+||++||+||++++|
T Consensus 393 ~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~r 458 (764)
T 3p5p_A 393 EYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTR 458 (764)
T ss_dssp HSCGGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhccchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHhHHHhhhhce
Confidence 99999999999999999999988764 9999999999999999999999999985
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=1.1e-46 Score=334.89 Aligned_cols=130 Identities=32% Similarity=0.621 Sum_probs=121.7
Q ss_pred CChHhhhccccCCccccccc---hhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcC------CCCccHHHH
Q 032926 1 MSCDVFEKFKDDDGKFKASL---TNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNS------QVNSTFAEQ 71 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~---~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~------~~~~~l~~~ 71 (130)
||||||++|+|++|+|++++ .+|++|||+||||||+++|||+|||+|+.||+++|++.+.++ .++++|+++
T Consensus 337 VS~dvf~~F~d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~~~~L~~e 416 (785)
T 3s9v_A 337 VSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAFKKNIRGE 416 (785)
T ss_dssp CCGGGGGGGBCTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCSSSCHHHH
T ss_pred CCHHHHHHHHhcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHH
Confidence 89999999999999999865 699999999999999999999999999999999999987642 256789999
Q ss_pred HHHhcCCcccchhhhHHHhhhhhhcCCCCcc------------cHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 72 IRHSLRVPLRRAVSRLESRYFLDIYPRDDLH------------DQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 72 V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
|++||++|||+++||+|||+||++|++++.| |+.||||||+|||+||++||+||++++|
T Consensus 417 V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 487 (785)
T 3s9v_A 417 VEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRR 487 (785)
T ss_dssp HHHHHHSCGGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCccccCchHHHHHHHHHHhcccchhhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999988764 9999999999999999999999999985
No 9
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=2e-46 Score=334.43 Aligned_cols=130 Identities=36% Similarity=0.671 Sum_probs=118.9
Q ss_pred CChHhhhccccCCccccccc---hhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCC-C-----CccHHHH
Q 032926 1 MSCDVFEKFKDDDGKFKASL---TNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQ-V-----NSTFAEQ 71 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~~---~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~-~-----~~~l~~~ 71 (130)
||||||++|+|++|+|++++ .+|++|||+|||||||++|||+|||+|+.||+++|++.+.++. + +++|+++
T Consensus 365 VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~~~L~~e 444 (817)
T 3sdr_A 365 VSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQE 444 (817)
T ss_dssp CCGGGGGGGBCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHHTTHHHH
T ss_pred ccHhHHHHHhhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHH
Confidence 89999999999999999854 6999999999999999999999999999999999999886422 2 3679999
Q ss_pred HHHhcCCcccchhhhHHHhhhhhhcCCCCcc------------cHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 72 IRHSLRVPLRRAVSRLESRYFLDIYPRDDLH------------DQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 72 V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~~------------n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
|++||++|||+++||+|||+||++|++++.| |+.||||||+|||+||++||+||++++|
T Consensus 445 V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 515 (817)
T 3sdr_A 445 IKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTS 515 (817)
T ss_dssp HHHHHHCCSTTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCchhccChHHHHHHHHHHhCccchhhhhhcccccccccHHHHHHHHHHHHHHHHHhhhhhhhhce
Confidence 9999999999999999999999999988764 9999999999999999999999999985
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=1.5e-44 Score=318.89 Aligned_cols=129 Identities=30% Similarity=0.525 Sum_probs=118.8
Q ss_pred CChHhhhccccCCcccccc---chhchHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHHhhcCCC------CccHHHH
Q 032926 1 MSCDVFEKFKDDDGKFKAS---LTNDVEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSMVSNSQV------NSTFAEQ 71 (130)
Q Consensus 1 VSsDvf~~F~d~~g~F~~~---~~~dv~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~~~~~~~------~~~l~~~ 71 (130)
||||||++|+ ++|+|++. ..+|++|||+||||||+++|||+|||+|+.||+++|++.+.++.. +++|+++
T Consensus 312 VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~dkw~~~~~L~~~ 390 (727)
T 3pya_A 312 VSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGE 390 (727)
T ss_dssp CCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCCCCSSEECSCHHHH
T ss_pred CCHHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCcccccccCCcHHHH
Confidence 8999999999 88999853 368999999999999999999999999999999999998865333 4789999
Q ss_pred HHHhcCCcccchhhhHHHhhhhhhcCCCCc-------------ccHHHHHHHHHhhHHHHHHHHHHHHHHhC
Q 032926 72 IRHSLRVPLRRAVSRLESRYFLDIYPRDDL-------------HDQTLLNFAKLDFNILQAMHQKKASEINR 130 (130)
Q Consensus 72 V~~aL~~P~h~~l~Rlear~yI~~Y~~~~~-------------~n~~lLelAklDFn~~Qs~hq~EL~~lsr 130 (130)
|++||++||||++||+|||+||+.|+++++ +|+.||||||+|||+||++||+||++++|
T Consensus 391 V~~aL~~P~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsr 462 (727)
T 3pya_A 391 IGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEWDIFQK 462 (727)
T ss_dssp HHHHHHSCGGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcHhcCChHHHHHHHHHHhccCcchhhhhhhccccccccHHHHHHHHHhHHHHHHHhHHHHhhhhe
Confidence 999999999999999999999999997654 59999999999999999999999999985
No 11
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=28.40 E-value=79 Score=25.67 Aligned_cols=31 Identities=13% Similarity=0.063 Sum_probs=26.0
Q ss_pred hHHHHHHHHHhhhcCCCchHHHHHHHHHHHHHHHH
Q 032926 24 VEGMLSLYEAAHLAIPGEDILDEAIVFTTTHLKSM 58 (130)
Q Consensus 24 v~~lL~LYeAS~l~~~gE~iLdea~~fs~~~L~~~ 58 (130)
+.|++.+|+|+. ++.-|+.|...+...++..
T Consensus 252 i~gl~~lY~~T~----d~~yL~~A~~la~~~l~~~ 282 (397)
T 2zzr_A 252 IYGIPLSYRKMK----DYQQIILFKGMTNYFLNRL 282 (397)
T ss_dssp HHHHHHHHHHHC----CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHC----CHHHHHHHHHHHHHHHHhh
Confidence 899999999994 6778999998887777654
No 12
>3td7_A FAD-linked sulfhydryl oxidase R596; four helix-bundle, orfan domain, oxidoreductase; HET: FAD; 2.21A {Acanthamoeba polyphaga mimivirus}
Probab=26.79 E-value=29 Score=27.57 Aligned_cols=21 Identities=24% Similarity=0.556 Sum_probs=18.0
Q ss_pred HHHHHHhcCCcccchhhhHHHhhhhh
Q 032926 69 AEQIRHSLRVPLRRAVSRLESRYFLD 94 (130)
Q Consensus 69 ~~~V~~aL~~P~h~~l~Rlear~yI~ 94 (130)
..+|..|+. ++.|||.-+||+
T Consensus 274 ~~~~~~~~~-----~~~~~~~~~~~~ 294 (295)
T 3td7_A 274 RTEVNDAIN-----NVERLESTHYIE 294 (295)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHT
T ss_pred hhhHHHHhh-----hHHHhhhccccc
Confidence 677888876 899999999996
No 13
>4emt_A Transmembrane protein 173; alpha/beta fold, innate immune sensor, C-DI-GMP, C-DI-AMP, M protein; HET: C2E; 1.50A {Homo sapiens} PDB: 4emu_A
Probab=24.31 E-value=59 Score=24.16 Aligned_cols=42 Identities=19% Similarity=0.397 Sum_probs=33.3
Q ss_pred cchhchHHHHHHHHHhhh---cCCCchHHHHHHHHHHHHHHHHhhc
Q 032926 19 SLTNDVEGMLSLYEAAHL---AIPGEDILDEAIVFTTTHLKSMVSN 61 (130)
Q Consensus 19 ~~~~dv~~lL~LYeAS~l---~~~gE~iLdea~~fs~~~L~~~~~~ 61 (130)
++..-...|+.||+.|+- ++.-|+=++.+..|.++ |++++.+
T Consensus 104 cv~E~ATPL~Tl~~M~~~~~a~~sre~r~eq~~~F~r~-L~~iL~~ 148 (188)
T 4emt_A 104 CVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRT-LEDILAD 148 (188)
T ss_dssp EEEEECTHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHH-HHHHHHH
T ss_pred EEEecCcHHHHHHHHhhccchhhhHHHHHHHHHHHHHH-HHHHHhc
Confidence 445788999999999963 34667889999999975 8888763
No 14
>1xkm_B Distinctin chain B; pore-forming peptide, heterodimer, structure, homodimer, disulfide, four-helix bundle, antibiotic; NMR {Synthetic} SCOP: j.4.1.6
Probab=22.31 E-value=34 Score=17.08 Aligned_cols=10 Identities=30% Similarity=0.667 Sum_probs=7.7
Q ss_pred HHHhhhhhhc
Q 032926 87 LESRYFLDIY 96 (130)
Q Consensus 87 lear~yI~~Y 96 (130)
+|||.|+++.
T Consensus 7 iearkyleql 16 (26)
T 1xkm_B 7 IEARKYLEQL 16 (26)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6888888764
No 15
>4ef4_A Transmembrane protein 173; sting/MITA/ERIS/MPYS/TMEM173, innate immune system, type I interferon, dimerization, C-DI-GMP; HET: C2E; 2.15A {Homo sapiens} PDB: 4ef5_A 4f9e_A 4f9g_A* 4f5e_A* 4f5d_A* 4f5w_A 4f5y_A*
Probab=20.89 E-value=72 Score=24.90 Aligned_cols=42 Identities=19% Similarity=0.402 Sum_probs=33.6
Q ss_pred cchhchHHHHHHHHHhhhc---CCCchHHHHHHHHHHHHHHHHhhc
Q 032926 19 SLTNDVEGMLSLYEAAHLA---IPGEDILDEAIVFTTTHLKSMVSN 61 (130)
Q Consensus 19 ~~~~dv~~lL~LYeAS~l~---~~gE~iLdea~~fs~~~L~~~~~~ 61 (130)
++..-...|+.||+++|-+ +.-|+=++.|..|+++ |++++.+
T Consensus 143 cv~E~ATPL~TL~~msq~~~a~~sr~~R~Eq~~lF~rt-L~~ILe~ 187 (265)
T 4ef4_A 143 CVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRT-LEDILAD 187 (265)
T ss_dssp EEEEECTHHHHHHHHHTCGGGCCCHHHHHHHHHHHHHH-HHHHHHH
T ss_pred EEEecCcHHHHHHHHhhccchhhhHHHHHHHHHHHHHH-HHHHHhc
Confidence 4457889999999999743 4556789999999986 8888864
No 16
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=20.68 E-value=48 Score=20.32 Aligned_cols=17 Identities=35% Similarity=0.767 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhhcCCCc
Q 032926 25 EGMLSLYEAAHLAIPGE 41 (130)
Q Consensus 25 ~~lL~LYeAS~l~~~gE 41 (130)
.+.|.||+-|-+++|-+
T Consensus 10 ~~vLDlYe~SnIrIP~D 26 (67)
T 2bnk_A 10 VAVLDLYEQSNIRIPSD 26 (67)
T ss_dssp HHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHcCCcCcHH
Confidence 56899999999999943
No 17
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=20.43 E-value=55 Score=22.50 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=15.8
Q ss_pred hcC-CCchHHHHHHHHHHHH
Q 032926 36 LAI-PGEDILDEAIVFTTTH 54 (130)
Q Consensus 36 l~~-~gE~iLdea~~fs~~~ 54 (130)
+++ +||++++....|++++
T Consensus 14 lrl~~Gedl~~~i~~~~~~~ 33 (146)
T 2h6l_A 14 LRLDYGKDLVRQIEEFLEEK 33 (146)
T ss_dssp EECCTTSBHHHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHc
Confidence 345 9999999999999864
Done!