BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032927
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1
Length = 177
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 5 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGAD-TRATYTLNEDGTVHVRNETWSDGK 63
K + VV D KRY+G WYEIA F R + G D ATY+L +DG ++V N+ ++ +
Sbjct: 26 KGVTVVNNFDAKRYLGTWYEIARFDHRFE--RGLDKVTATYSLRDDGGINVINKGYNPDR 83
Query: 64 R--GSIEGTAY-KADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPT 120
EG AY DP + A LKV F+ P + G Y V+ +D Y++AL+ P
Sbjct: 84 EMWQKTEGKAYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPD 134
Query: 121 RKYLW 125
R YLW
Sbjct: 135 RDYLW 139
>sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12)
GN=blc PE=1 SV=1
Length = 177
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 5 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS--DG 62
+ + VV D KRY+G WYEIA F R + + ATY+L +DG ++V N+ ++ G
Sbjct: 26 RGVTVVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRG 84
Query: 63 KRGSIEGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRK 122
EG AY + A LKV F+ P + G Y V+ +D Y++AL+ P R
Sbjct: 85 MWQQSEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRD 136
Query: 123 YLW 125
YLW
Sbjct: 137 YLW 139
>sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc
PE=3 SV=1
Length = 177
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 5 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS--DG 62
+ + VV D KRY+G WYEIA F R + + ATY+L +DG ++V N+ ++ G
Sbjct: 26 RGVTVVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRG 84
Query: 63 KRGSIEGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRK 122
EG AY + A LKV F+ P + G Y V+ +D Y++AL+ P R
Sbjct: 85 MWQQSEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRD 136
Query: 123 YLW 125
YLW
Sbjct: 137 YLW 139
>sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R877 PE=1 SV=1
Length = 169
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 3 SKKEMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDG 62
SK+++ LDI+RYMG WYEIA P+ Q K ++ A Y L E + V N +G
Sbjct: 18 SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEING 76
Query: 63 KRGSIEGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGN--YWVLYIDDNYQYALI 116
+ S+ GTA A ++ F P + G Y V++ID+NYQYA++
Sbjct: 77 RINSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV 128
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1
Length = 189
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWS-DGKRGSI 67
V D+K+Y+GRWYEI P+ + G +A Y+L E+G + V N+ S DG +
Sbjct: 33 VQENFDVKKYLGRWYEIEKIPASFE--KGNCIQANYSLMENGNIEVLNKELSPDGTMNQV 90
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRKYLW 125
+G A +++ S+ AKL+V+F+ P P P YW+L D YAL+ T + W
Sbjct: 91 KGEAKQSN-VSEPAKLEVQFF--PLMPPAP----YWILATDYE-NYALVYSCTT-FFW 139
>sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE=1 SV=1
Length = 189
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D+ +Y+GRWYEI P+ + NG +A Y+L E+G + V N E +DG I
Sbjct: 33 VQENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKVLNQELRADGTVNQI 90
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNY 111
EG A + ++ AKL+VKF F P P YW+L D +NY
Sbjct: 91 EGEATPVN-LTEPAKLEVKFSW--FMPSAP----YWILATDYENY 128
>sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod PE=1 SV=1
Length = 189
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D+K+Y+GRWYEI P + G +A Y+L E+G + V N E DG +
Sbjct: 33 VQENFDVKKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENGNIKVLNKELRPDGTLNQV 90
Query: 68 EGTAYKADPKSDEAKLKVKFY--VPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRKYLW 125
EG A +++ S+ AKL+V+F+ +PP YW+L D YAL+ T + W
Sbjct: 91 EGEAKQSN-MSEPAKLEVQFFSLMPP--------APYWILATDYE-SYALVYSCTT-FFW 139
>sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2 SV=1
Length = 189
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D+ +Y+G+WYEI P + G+ +A Y+L E+G V V N E +DG I
Sbjct: 33 VQENFDVNKYLGKWYEIEKIPVSFE--KGSCIQANYSLKENGNVEVINKELRADGTVNQI 90
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALI 116
EG A + ++ AKL VKF+ F P P YWVL D YAL+
Sbjct: 91 EGEATPEN-ITEPAKLAVKFFW--FMPSAP----YWVLATDYE-NYALV 131
>sp|P37153|APOD_RABIT Apolipoprotein D OS=Oryctolagus cuniculus GN=APOD PE=2 SV=1
Length = 189
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D+ +Y+GRWYEI P + G +A Y+L E+G + V N E DG I
Sbjct: 34 VQENFDVHKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENGNIKVLNQELRPDGTVNQI 91
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNY 111
EG A +++ ++ AKL VKF+ P P YWVL D +NY
Sbjct: 92 EGQATQSN-LTEPAKLGVKFF--QLMPTAP----YWVLATDYENY 129
>sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD PE=2 SV=1
Length = 189
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D+ +Y+GRWYEI P + G +A Y+L E+G V V N E DG I
Sbjct: 33 VQENFDLNKYLGRWYEIEKIPVSFE--KGNCIQANYSLKENGRVKVLNQELRPDGTVNQI 90
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNY 111
EG A ++ ++ AKL VKF+ P P YWVL D DNY
Sbjct: 91 EGEATHSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYDNY 128
>sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1
Length = 189
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 9 VVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRN-ETWSDGKRGSI 67
V D +Y GRWYEI P+ + G +A Y+L E+G + V N E +DG I
Sbjct: 33 VQENFDPNKYFGRWYEIEKIPTTFE--KGRCIQANYSLKENGKIKVLNQELRADGTVNQI 90
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNY 111
EG A + ++ AKL+VKF+ F P P YWVL D +NY
Sbjct: 91 EGEASPVN-ITEPAKLEVKFFW--FMPSAP----YWVLATDYENY 128
>sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=blc PE=3
SV=2
Length = 171
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 10 VRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSD--GKRGSI 67
V ++ Y+G+WYE+A + + + A Y + DG + V N +S+ G+
Sbjct: 26 VSDFELNNYLGKWYEVARL-DHSFERGLSQVTAEYRVRNDGGISVLNRGYSEEKGEWKEA 84
Query: 68 EGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNYQYALIGEPTRKYLWG 126
EG AY + +D LKV F+ P + G+Y V +D +NY YA + P +YLW
Sbjct: 85 EGKAYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTEYLWL 136
Query: 127 AS 128
S
Sbjct: 137 LS 138
>sp|P49291|LAZA_SCHAM Lazarillo protein OS=Schistocerca americana PE=1 SV=1
Length = 214
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 26/114 (22%)
Query: 10 VRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLN----------EDGTVHVRNETW 59
+ + YMG+WYE A S + G A Y+++ +D T H N T
Sbjct: 34 INDFNATLYMGKWYEYAKMGSMPYEEGGVCVTAEYSMSSNNITVVNSMKDNTTHEVNTT- 92
Query: 60 SDGKRGSIEGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNYQ 112
G A A + KL V FP P VGNYW+L D DNY
Sbjct: 93 --------TGWAEFASELHTDGKLSVH------FPNSPSVGNYWILSTDYDNYS 132
>sp|Q5ECE3|LOPAP_LONON Lopap OS=Lonomia obliqua PE=1 SV=2
Length = 201
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 6 EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRG 65
+M+ V D+ Y G WYEI FP N+ NG YT ++G + VR D
Sbjct: 26 DMKAVSKFDMNAYQGTWYEIKKFPVANEA-NGDCGSVEYT-PDNGLLKVRAGHVEDDIEK 83
Query: 66 SIEGTAYKADPKSDEAKLKVKFYVPPFFPIIPVVGNYWVLYID-DNYQYALIGEPTRKY 123
+ G K SD A+L + V + + P+ W++ D DNY IG + Y
Sbjct: 84 FVVGVLTKNAGTSD-AELTLSVVVGDYVRVAPL----WIVSTDYDNYA---IGYSCKDY 134
>sp|P09464|BBP_PIEBR Bilin-binding protein OS=Pieris brassicae PE=1 SV=2
Length = 189
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 6 EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRG 65
E++ V D Y G+W+E+A +P+ + K G A YT E +V V N GK
Sbjct: 25 EVKPVDNFDWSNYHGKWWEVAKYPNSVE-KYGKCGWAEYTP-EGKSVKVSNYHVIHGKEY 82
Query: 66 SIEGTAY 72
IEGTAY
Sbjct: 83 FIEGTAY 89
>sp|Q891E7|GCP_CLOTE Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Clostridium tetani (strain Massachusetts / E88)
GN=gcp PE=3 SV=1
Length = 340
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 90 PPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRKYLWGASY 129
PPF ++ GN +++Y+++ +Y +IGE TR G +Y
Sbjct: 132 PPFLCLVVSGGNTFIVYVENYGEYEIIGE-TRDDAAGEAY 170
>sp|Q8T9W1|TAGD_DICDI Serine protease/ABC transporter B family protein tagD
OS=Dictyostelium discoideum GN=tagD PE=3 SV=1
Length = 1825
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 22 WYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEA 81
++++AS PS N+P D Y + V ++W GS+ Y D
Sbjct: 417 FFDLASDPSNNEPVPPEDYSQLYQPLYNAGARVHGDSW-----GSLSIQGYLGSYSDDAG 471
Query: 82 KLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQY-ALIGEPTRK 122
+ Y P F I+ GN N QY +L+ + T K
Sbjct: 472 SIDDFLYTHPDFIILRAAGN--------NEQYSSLLSQATAK 505
>sp|P06911|LCN5_RAT Epididymal-specific lipocalin-5 OS=Rattus norvegicus GN=Lcn5 PE=1
SV=2
Length = 188
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 1 MASKKEMEVVRGLDIKRYMGRWYEIASFPSR 31
+A+ E VV+ DI +++G WYEIA F S+
Sbjct: 16 LAAGTEGAVVKDFDISKFLGFWYEIA-FASK 45
>sp|P44544|NANM_HAEIN N-acetylneuraminate epimerase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=nanM PE=1 SV=2
Length = 375
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 13 LDIKRYMGRWYEIASFPS--RNQPKNGADTRATYTL-----NEDGTVHVRNETW 59
LD+K +W EIA+FP RNQP A Y NE G + + N+ +
Sbjct: 58 LDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAY 111
>sp|Q4QP39|NANM_HAEI8 N-acetylneuraminate epimerase OS=Haemophilus influenzae (strain
86-028NP) GN=nanM PE=3 SV=2
Length = 375
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 13 LDIKRYMGRWYEIASFPS--RNQPKNGADTRATYTL-----NEDGTVHVRNETW 59
LD+K +W EIA+FP RNQP A Y NE G + + N+ +
Sbjct: 58 LDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAY 111
>sp|A2AJB7|LCN5_MOUSE Epididymal-specific lipocalin-5 OS=Mus musculus GN=Lcn5 PE=1 SV=1
Length = 192
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 1 MASKKEMEVVRGLDIKRYMGRWYEIA 26
+A+ E VV+ D+ +++G WYEIA
Sbjct: 23 LAAGTEAAVVKDFDVNKFLGFWYEIA 48
>sp|A5UFV3|NANM_HAEIG N-acetylneuraminate epimerase OS=Haemophilus influenzae (strain
PittGG) GN=nanM PE=3 SV=1
Length = 375
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 13 LDIKRYMGRWYEIASFPS--RNQPKNGADTRATYTL-----NEDGTVHVRNETW 59
LD+K +W EIA+FP RNQP A Y NE G + + N+ +
Sbjct: 58 LDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAY 111
>sp|A5UB03|NANM_HAEIE N-acetylneuraminate epimerase OS=Haemophilus influenzae (strain
PittEE) GN=nanM PE=3 SV=1
Length = 375
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 13 LDIKRYMGRWYEIASFPS--RNQPKNGADTRATYTL-----NEDGTVHVRNETW 59
LD+K +W EIA+FP RNQP A Y NE G + + N+ +
Sbjct: 58 LDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAY 111
>sp|A6VJR4|ATGT_METM7 tRNA-guanine(15) transglycosylase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=tgtA PE=3 SV=1
Length = 649
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 19 MGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAY-KADPK 77
+G +I + P ++ K +D T+ ED + + G+I+G+ Y K
Sbjct: 118 VGTILDIPTGPDVSREKAESDLIETFKRAEDSIKRRKEMGYKLALNGTIQGSKYLDLRQK 177
Query: 78 SDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRK--YLWGASY 129
S E K+ F + P ++P++ +Y + + + + PT K +L+G +
Sbjct: 178 SAEVMGKMDFDIYPIGAVVPLMEDYRYREVAEVILNSKMHLPTNKPVHLFGCGH 231
>sp|Q6LZL5|ATGT_METMP tRNA-guanine(15) transglycosylase OS=Methanococcus maripaludis
(strain S2 / LL) GN=tgtA PE=3 SV=1
Length = 649
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 19 MGRWYEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAY-KADPK 77
+G +I + P ++ K +D T+ ED + + G+I+G+ Y K
Sbjct: 118 VGTILDIPTGPDVSREKAESDLIETFKRAEDSIKRRKEMGYKLALNGTIQGSKYLDLRQK 177
Query: 78 SDEAKLKVKFYVPPFFPIIPVVGNYWVLYIDDNYQYALIGEPTRK--YLWGASY 129
S E K+ F + P ++P++ +Y + + + + PT K +L+G +
Sbjct: 178 SAEVMGKMDFDIYPIGAVVPLMEDYRYREVAEVILNSKMHLPTNKPVHLFGCGH 231
>sp|C6E643|DNAK_GEOSM Chaperone protein DnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=3
SV=1
Length = 640
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 23 YEIASFPSRNQPKNGADTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAK 82
+E++ PS P+ T+ ++ +G VHV + GK SI TA K + K
Sbjct: 452 FELSGIPS--APRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEVEK 509
Query: 83 L 83
+
Sbjct: 510 M 510
>sp|P00305|ICYA_MANSE Insecticyanin-A OS=Manduca sexta GN=INSA PE=1 SV=1
Length = 189
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 6 EMEVVRGLDIKRYMGRWYEIASFPSRNQPKNGADTRATYTLNEDG-TVHVRNETWSDGKR 64
+++ V D+ + G W+EIA P N+ + G T A Y DG V N S+G +
Sbjct: 11 DVKPVNDFDLSAFAGAWHEIAKLPLENENQ-GKCTIAEYKY--DGKKASVYNSFVSNGVK 67
Query: 65 GSIEG 69
+EG
Sbjct: 68 EYMEG 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,501,434
Number of Sequences: 539616
Number of extensions: 2264666
Number of successful extensions: 4180
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4150
Number of HSP's gapped (non-prelim): 28
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)