BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032928
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49360|GCSH_FLAPU Glycine cleavage system H protein, mitochondrial (Fragment)
OS=Flaveria pubescens GN=GDCSH PE=2 SV=1
Length = 152
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 109/121 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVATVGITD
Sbjct: 1 MALRMWASSTANALRLSSATRPHYSPLSRCFSSVLDGLKYANSHEWVKHEGSVATVGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 V 121
+
Sbjct: 121 I 121
>sp|Q39732|GCSH_FLAAN Glycine cleavage system H protein, mitochondrial OS=Flaveria
anomala GN=GDCSH PE=2 SV=1
Length = 162
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 109/121 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALRMWASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITD
Sbjct: 1 MALRMWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 V 121
+
Sbjct: 121 I 121
>sp|P49359|GCSH_FLAPR Glycine cleavage system H protein, mitochondrial OS=Flaveria
pringlei GN=GDCSH PE=2 SV=1
Length = 162
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 109/121 (90%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVGITD 60
MALR+WASSTANALR+S A++ LSRCFSSVLDGLKYA+SHEWVKHEGSVAT+GITD
Sbjct: 1 MALRIWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITD 60
Query: 61 HAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGL 120
HAQDHLGEVVFV+LPE G SV + GFG VESVKATSDVNSPISGE++EVN+KL+ETPGL
Sbjct: 61 HAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGL 120
Query: 121 V 121
+
Sbjct: 121 I 121
>sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. japonica GN=GDCSH PE=1 SV=1
Length = 164
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 110/124 (88%), Gaps = 3/124 (2%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+G
Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ET
Sbjct: 61 ITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSET 120
Query: 118 PGLV 121
PGL+
Sbjct: 121 PGLI 124
>sp|A2Z9B8|GCSH_ORYSI Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. indica GN=GDCSH PE=2 SV=1
Length = 164
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 110/124 (88%), Gaps = 3/124 (2%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALR+WASS ANAL+ISC+ T PA+++SR FS+VLDGLKY+SSHEWVK++GSVAT+G
Sbjct: 1 MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLGEVVFVELPE GA V QGG FG VESVKATSD+NSPISGEV+EVN KL+ET
Sbjct: 61 ITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSET 120
Query: 118 PGLV 121
PGL+
Sbjct: 121 PGLI 124
>sp|P46485|GCSH_FLATR Glycine cleavage system H protein, mitochondrial OS=Flaveria
trinervia GN=GDCSH PE=2 SV=1
Length = 165
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 107/123 (86%), Gaps = 2/123 (1%)
Query: 1 MALRMWASSTANALRISCASKTPAFALSRCFSS--VLDGLKYASSHEWVKHEGSVATVGI 58
MALR+WASSTA ALR+S AS+ L RCFSS VLDGLKYA+SHEWVKHEGSVAT+GI
Sbjct: 1 MALRIWASSTAKALRLSSASRPHFSPLFRCFSSAAVLDGLKYANSHEWVKHEGSVATIGI 60
Query: 59 TDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETP 118
TDHAQDHLGEVVFVELPE G SV + GFG VESVKATSDVNSPISGE++EVN+KLT+TP
Sbjct: 61 TDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLTKTP 120
Query: 119 GLV 121
GL+
Sbjct: 121 GLI 123
>sp|P16048|GCSH_PEA Glycine cleavage system H protein, mitochondrial OS=Pisum sativum
GN=GDCSH PE=1 SV=1
Length = 165
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/124 (79%), Positives = 109/124 (87%), Gaps = 3/124 (2%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASSTANAL++S +S+ P F++SRCFS+VLDGLKYA SHEWVKHEGSVAT+G
Sbjct: 1 MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQDHLGEVVFVELPE G SV +G GFG VESVKATSDVNSPISGEVIEVNT LT
Sbjct: 61 ITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGK 120
Query: 118 PGLV 121
PGL+
Sbjct: 121 PGLI 124
>sp|P93255|GCSH_MESCR Glycine cleavage system H protein, mitochondrial
OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1
Length = 163
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/124 (75%), Positives = 106/124 (85%), Gaps = 4/124 (3%)
Query: 1 MALRMWASSTANALRISCASKT---PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASS ANAL +SCA K+ PA +LSRCFS+VLDGLKYASSHEWVKH GSVAT+G
Sbjct: 1 MALRMWASSAANALGVSCAPKSHLLPALSLSRCFSTVLDGLKYASSHEWVKHGGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
ITDHAQ HLG+VVF ELPE GA V G F VESVKATSDVNSPISGE++EVNTKL+++
Sbjct: 61 ITDHAQGHLGDVVFAELPEGGA-VSAGKPFASVESVKATSDVNSPISGEIVEVNTKLSDS 119
Query: 118 PGLV 121
PGL+
Sbjct: 120 PGLL 123
>sp|Q9LQL0|GCSH2_ARATH Probable glycine cleavage system H protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1
Length = 166
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 110/125 (88%), Gaps = 4/125 (3%)
Query: 1 MALRMWASSTANALRISCASKT----PAFALSRCFSSVLDGLKYASSHEWVKHEGSVATV 56
MALRMWASSTANAL++S ++ PAF++SRCFSSVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1 MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60
Query: 57 GITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTE 116
GITDHAQDHLGEVVFVELPE +SV + FG VESVKATS++ SPISGEVIEVNTKLTE
Sbjct: 61 GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120
Query: 117 TPGLV 121
+PGL+
Sbjct: 121 SPGLI 125
>sp|P25855|GCSH1_ARATH Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis
thaliana GN=GDCSH PE=1 SV=1
Length = 165
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 103/124 (83%), Gaps = 3/124 (2%)
Query: 1 MALRMWASSTANALRISCASKTP---AFALSRCFSSVLDGLKYASSHEWVKHEGSVATVG 57
MALRMWASSTANAL++S + F+ SRCFS+VL+GLKYA+SHEWVKHEGSVAT+G
Sbjct: 1 MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIG 60
Query: 58 ITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTET 117
IT HAQDHLGEVVFVELPE SV + FG VESVKATS++ SPISGE+IEVN KLTE+
Sbjct: 61 ITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTES 120
Query: 118 PGLV 121
PGL+
Sbjct: 121 PGLI 124
>sp|Q1AR90|GCSH_RUBXD Glycine cleavage system H protein OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=gcvH PE=3 SV=1
Length = 126
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%)
Query: 31 FSSVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVV 90
+ + L Y +HEW + EG ATVGITDHAQ+ LG+VVFVELPE G+SV+ G FG +
Sbjct: 1 MAEIPQDLVYTRTHEWARIEGDAATVGITDHAQEELGDVVFVELPEVGSSVQAGEPFGTI 60
Query: 91 ESVKATSDVNSPISGEVIEVNTKLTETP 118
ESVKA SD+ SP+SGEV EVNT L E+P
Sbjct: 61 ESVKAVSDLYSPVSGEVTEVNTSLEESP 88
>sp|Q0VLA7|GCSH_ALCBS Glycine cleavage system H protein OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1
Length = 128
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
L+YASSHEW K E VATVGI+DHAQD +G++V+VELPE G V G GVVESVKA S
Sbjct: 8 LRYASSHEWAKVEDGVATVGISDHAQDAMGDLVYVELPEVGQVVAAGDETGVVESVKAAS 67
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+ SP+SGE++E+N L + P LV
Sbjct: 68 DIYSPVSGEIVEINEALEDEPELV 91
>sp|Q2YWP4|GCSH_STAAB Glycine cleavage system H protein OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=gcvH PE=3 SV=1
Length = 126
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 69/89 (77%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY++ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSNEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q8NXH7|GCSH_STAAW Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MW2) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q6GB23|GCSH_STAAS Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MSSA476) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q6GII3|GCSH_STAAR Glycine cleavage system H protein OS=Staphylococcus aureus (strain
MRSA252) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|P64214|GCSH_STAAN Glycine cleavage system H protein OS=Staphylococcus aureus (strain
N315) GN=gcvH PE=1 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|P64213|GCSH_STAAM Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|A5IR11|GCSH_STAA9 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH9) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|A6TZT7|GCSH_STAA2 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
JH1) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|A7X019|GCSH_STAA1 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 68/89 (76%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VAT+GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q67N37|GCSH_SYMTH Glycine cleavage system H protein OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=gcvH PE=3 SV=1
Length = 128
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKY+ HEW++ EG++ VGIT AQD LG+VVFVELPE G +KQ FGVVESVK S
Sbjct: 8 LKYSKEHEWIRVEGNIGIVGITWFAQDQLGDVVFVELPEVGRELKQNEQFGVVESVKTVS 67
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+ P SG+V+EVNTKL +P L+
Sbjct: 68 DLYCPASGKVVEVNTKLESSPELI 91
>sp|A6VXM7|GCSH_MARMS Glycine cleavage system H protein OS=Marinomonas sp. (strain MWYL1)
GN=gcvH PE=3 SV=1
Length = 127
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S++ + LKYA SHEWV G TVGITDHAQD LG+VV+VELPE G V F +
Sbjct: 1 MSTIPENLKYADSHEWVLDNGDGTVTVGITDHAQDLLGDVVYVELPEVGTEVTATEQFSL 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLV 121
VESVKA SD+ +P++GEVIEVN L + P L+
Sbjct: 61 VESVKAASDIYAPVNGEVIEVNDALNDAPELI 92
>sp|B0K241|GCSH_THEPX Glycine cleavage system H protein OS=Thermoanaerobacter sp. (strain
X514) GN=gcvH PE=3 SV=1
Length = 126
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
VL+GL Y+ HEWVK EG A +GITD+AQ LG +V++ELPE GA + G GVVES
Sbjct: 2 EVLEGLYYSKDHEWVKVEGDKAYIGITDYAQHSLGNIVYIELPEVGAELSAGDVLGVVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VKA SDV +P+ G+V+EVN + + P LV
Sbjct: 62 VKAASDVYTPVDGKVLEVNNAIVDDPSLV 90
>sp|B0KD96|GCSH_THEP3 Glycine cleavage system H protein OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvH PE=3
SV=1
Length = 126
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
V++GL Y+ HEWVK EG A +GITD+AQ LG +V++ELPE GA + G GVVES
Sbjct: 2 EVIEGLYYSKDHEWVKVEGDKAYIGITDYAQHSLGNIVYIELPEVGAELSAGDVLGVVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VKA SDV +P+ G+V+EVN + + P LV
Sbjct: 62 VKAASDVYTPVDGKVLEVNNAIVDDPSLV 90
>sp|A8Z1D8|GCSH_STAAT Glycine cleavage system H protein OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=gcvH PE=3 SV=1
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|A6QFB6|GCSH_STAAE Glycine cleavage system H protein OS=Staphylococcus aureus (strain
Newman) GN=gcvH PE=3 SV=1
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q5HHK8|GCSH_STAAC Glycine cleavage system H protein OS=Staphylococcus aureus (strain
COL) GN=gcvH PE=3 SV=1
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q2FZZ8|GCSH_STAA8 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
NCTC 8325) GN=gcvH PE=3 SV=1
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|Q2FII7|GCSH_STAA3 Glycine cleavage system H protein OS=Staphylococcus aureus (strain
USA300) GN=gcvH PE=3 SV=1
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
+V + LKY+ HEWVK EG+VA +GIT++AQ LG++VFVELPET + +G FG VES
Sbjct: 2 AVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VK S++ +PISG+V+EVN +L ++P V
Sbjct: 62 VKTVSELYAPISGKVVEVNEELEDSPEFV 90
>sp|A5FUJ7|GCSH_ACICJ Glycine cleavage system H protein OS=Acidiphilium cryptum (strain
JF-5) GN=gcvH PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 60/83 (72%)
Query: 39 KYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSD 98
+++ HEWV+ +G VATVGITDHAQ LG+VVFVELPETG V G VVESVKA SD
Sbjct: 5 RFSKDHEWVRLDGDVATVGITDHAQSALGDVVFVELPETGRHVDAGEACAVVESVKAASD 64
Query: 99 VNSPISGEVIEVNTKLTETPGLV 121
V +P++G V E N L + PG+V
Sbjct: 65 VYAPLAGTVTEANGALADDPGMV 87
>sp|B0VCZ2|GCSH_ACIBY Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain AYE) GN=gcvH PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G GVVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|A3M4W5|GCSH_ACIBT Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=gcvH PE=3 SV=2
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G GVVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|B2HZ03|GCSH_ACIBC Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain ACICU) GN=gcvH PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G GVVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|B7I4Z0|GCSH_ACIB5 Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain AB0057) GN=gcvH PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G GVVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|B7H3Q0|GCSH_ACIB3 Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain AB307-0294) GN=gcvH PE=3 SV=1
Length = 124
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G GVVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|A7IHF1|GCSH_XANP2 Glycine cleavage system H protein OS=Xanthobacter autotrophicus
(strain ATCC BAA-1158 / Py2) GN=gcvH PE=3 SV=1
Length = 125
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 64/84 (76%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
++Y HE+V+ EG VA VGI+D+AQ LG+VVFVELPE G V +GG VVESVKA S
Sbjct: 4 VRYTKDHEYVRVEGDVAVVGISDYAQQQLGDVVFVELPEIGKVVTKGGEAAVVESVKAAS 63
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
+V +P+SGEV+EVN++L PGLV
Sbjct: 64 EVYAPLSGEVVEVNSELEGAPGLV 87
>sp|Q8CPW8|GCSH_STAES Glycine cleavage system H protein OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=gcvH PE=3 SV=1
Length = 126
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 64/84 (76%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
KY+ HEWVK E +VATVGIT++AQ+ LG++VFVELPET + +G FG VESVK S
Sbjct: 7 FKYSKEHEWVKIENNVATVGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
++ +PISG+++EVN +L ++P V
Sbjct: 67 ELYAPISGKIVEVNEELEDSPEFV 90
>sp|A9ACU4|GCSH_BURM1 Glycine cleavage system H protein OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=gcvH PE=3 SV=1
Length = 126
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKY HEW++ E TVGITDHAQ LG++VF+ELPE G V G GV
Sbjct: 1 MSNVPADLKYTEEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKQVTAGDAVGV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLVIFSVNS 127
VESVKA SD+ SP+SGE++E+N+ + +TP SVNS
Sbjct: 61 VESVKAASDIYSPVSGEIVEINSAIVDTPD----SVNS 94
>sp|Q5HQR3|GCSH_STAEQ Glycine cleavage system H protein OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1
Length = 126
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
KY+ HEWVK E +VAT+GIT++AQ+ LG++VFVELPET + +G FG VESVK S
Sbjct: 7 FKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
++ +PISG+++EVN +L ++P V
Sbjct: 67 ELYAPISGKIVEVNEELEDSPEFV 90
>sp|A7HQX9|GCSH_PARL1 Glycine cleavage system H protein OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=gcvH PE=3
SV=1
Length = 125
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
+++ HEWV+ +G +AT+GITD+AQ+ LG+VVFVELPE G + G VVESVKA S
Sbjct: 4 IRFTDQHEWVRVDGDIATIGITDYAQEQLGDVVFVELPEVGKDIAAGDEAAVVESVKAAS 63
Query: 98 DVNSPISGEVIEVNTKLTETP 118
+V SP+SGEVI+VN+ + +TP
Sbjct: 64 EVYSPVSGEVIDVNSDIEKTP 84
>sp|A1JPN4|GCSH_YERE8 Glycine cleavage system H protein OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=gcvH PE=3
SV=1
Length = 128
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYASSHEWV+ +G V +VGIT+HAQ+ LG++VFV+LPE G+ V G V
Sbjct: 1 MSNVPADLKYASSHEWVRADGDGVYSVGITEHAQELLGDMVFVDLPEVGSEVSAGSDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLV 121
ESVKA SD+ +PISGE+I VN +L +P LV
Sbjct: 61 AESVKAASDIYAPISGEIIAVNAELESSPELV 92
>sp|Q8UFD5|GCSH_AGRT5 Glycine cleavage system H protein OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=gcvH PE=3 SV=1
Length = 120
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LK+ + HEW+K EG +ATVGIT HA + LG++VFVELPE GA+ + G VESVKA S
Sbjct: 2 LKFTAEHEWLKFEGDIATVGITSHAAEQLGDLVFVELPEVGATFAKDGDAATVESVKAAS 61
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
DV P+ GEV+E+N + + P LV
Sbjct: 62 DVYCPLDGEVVEINQAIVDDPSLV 85
>sp|A8MEG5|GCSH_ALKOO Glycine cleavage system H protein OS=Alkaliphilus oremlandii
(strain OhILAs) GN=gcvH PE=3 SV=1
Length = 127
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%)
Query: 37 GLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
GL Y+ HEWVK EG+ A +GITD AQ LGE+VFVELPE + QG F VVESVKA
Sbjct: 6 GLLYSKDHEWVKVEGNEAYIGITDFAQHALGEIVFVELPEVDDEIAQGDAFSVVESVKAA 65
Query: 97 SDVNSPISGEVIEVNTKLTETPGLV 121
SD SP+SG+V+EVN +L P L+
Sbjct: 66 SDAYSPVSGKVLEVNEELDGAPELL 90
>sp|Q6D975|GCSH_ERWCT Glycine cleavage system H protein OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=gcvH
PE=3 SV=1
Length = 130
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYA+SHEWV HEG + +VGIT+HAQ+ LG++VF++LPE G V G V
Sbjct: 1 MSNVPTELKYATSHEWVLHEGDGIYSVGITEHAQELLGDMVFIDLPEVGTVVAAGDDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLV 121
ESVKA SD+ +PISGEV+EVN L +P LV
Sbjct: 61 AESVKAASDIYAPISGEVVEVNEDLENSPELV 92
>sp|A8GIS0|GCSH_SERP5 Glycine cleavage system H protein OS=Serratia proteamaculans
(strain 568) GN=gcvH PE=3 SV=1
Length = 128
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 31 FSSVLDGLKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGV 89
S+V LKYASSHEWV+ EG+ V TVGIT+HAQ+ LG++VFV+LPE G +V G V
Sbjct: 1 MSNVPTELKYASSHEWVRSEGNGVYTVGITEHAQELLGDMVFVDLPEVGRTVAAGEDCAV 60
Query: 90 VESVKATSDVNSPISGEVIEVNTKLTETPGLV 121
ESVKA SD+ +PISGE++ VN +L +P LV
Sbjct: 61 AESVKAASDIYAPISGEIVAVNGELESSPELV 92
>sp|Q8RCW0|GCSH2_THETN Glycine cleavage system H protein 2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=gcvH2 PE=3 SV=1
Length = 126
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 61/89 (68%)
Query: 33 SVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVES 92
VL+GL Y+ HEWVK EG +GITD+AQ LG +V+VELPE G+ + G GVVES
Sbjct: 2 EVLEGLYYSKDHEWVKVEGDKVYIGITDYAQHSLGNIVYVELPEVGSELSAGDVLGVVES 61
Query: 93 VKATSDVNSPISGEVIEVNTKLTETPGLV 121
VKA SDV +P+ +V+EVN L E P L+
Sbjct: 62 VKAASDVYTPVDIKVLEVNNSLVEDPSLI 90
>sp|B0VR13|GCSH_ACIBS Glycine cleavage system H protein OS=Acinetobacter baumannii
(strain SDF) GN=gcvH PE=3 SV=1
Length = 124
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 60/84 (71%)
Query: 38 LKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATS 97
LKYA +HEWVK EG + GITDHAQD LG++V+VE PE G+ V G VVESVK S
Sbjct: 7 LKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQARVVESVKTAS 66
Query: 98 DVNSPISGEVIEVNTKLTETPGLV 121
D+++P+SG V+EVNT L + P V
Sbjct: 67 DIHAPVSGTVVEVNTDLEDDPDFV 90
>sp|Q8XU99|GCSH_RALSO Glycine cleavage system H protein OS=Ralstonia solanacearum (strain
GMI1000) GN=gcvH PE=3 SV=1
Length = 127
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 38 LKYASSHEWVKHEGS-VATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKAT 96
LKY SHEWV+ E T+GITD AQ+ LG++VF+ELP+TG VKQG VVESVKA
Sbjct: 8 LKYTESHEWVRTEADGTLTIGITDLAQEQLGDIVFLELPDTGRQVKQGEAIAVVESVKAA 67
Query: 97 SDVNSPISGEVIEVNTKLTETP 118
SD+ +P+SGEVI N TE+P
Sbjct: 68 SDIYAPVSGEVIASNADATESP 89
>sp|Q89I87|GCSH_BRAJA Glycine cleavage system H protein OS=Bradyrhizobium japonicum
(strain USDA 110) GN=gcvH PE=3 SV=1
Length = 122
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%)
Query: 40 YASSHEWVKHEGSVATVGITDHAQDHLGEVVFVELPETGASVKQGGGFGVVESVKATSDV 99
Y S HEW+ EG VATVGITD+AQ LG+VVF+ELP+ G ++K+ VVESVKA SDV
Sbjct: 6 YTSDHEWLAIEGDVATVGITDYAQSQLGDVVFIELPKLGRALKKAEAAAVVESVKAASDV 65
Query: 100 NSPISGEVIEVNTKLTETPGLV 121
+P++GEV+E N L P LV
Sbjct: 66 YAPVTGEVLETNDALAAEPALV 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,356,598
Number of Sequences: 539616
Number of extensions: 1690185
Number of successful extensions: 5468
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4763
Number of HSP's gapped (non-prelim): 504
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)