Your job contains 1 sequence.
>032929
MAEKLAPEKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG
NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQK
RLMLQRFQEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032929
(130 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178888 - symbol:AT5G58740 "AT5G58740" species... 617 3.1e-60 1
UNIPROTKB|E2RSY6 - symbol:NUDCD2 "Uncharacterized protein... 203 2.3e-16 1
UNIPROTKB|Q8WVJ2 - symbol:NUDCD2 "NudC domain-containing ... 203 2.3e-16 1
UNIPROTKB|F1RR73 - symbol:NUDCD2 "Uncharacterized protein... 203 2.3e-16 1
MGI|MGI:1277103 - symbol:Nudcd2 "NudC domain containing 2... 203 2.3e-16 1
ZFIN|ZDB-GENE-040801-49 - symbol:nudcd2 "NudC domain cont... 203 2.3e-16 1
UNIPROTKB|Q32KU8 - symbol:NUDCD2 "NudC domain containing ... 201 3.7e-16 1
RGD|1307203 - symbol:Nudcd2 "NudC domain containing 2" sp... 200 4.7e-16 1
UNIPROTKB|E1BUG9 - symbol:NUDCD2 "Uncharacterized protein... 192 3.3e-15 1
TAIR|locus:2178431 - symbol:BOB1 "BOBBER1" species:3702 "... 169 2.0e-12 1
TAIR|locus:2137345 - symbol:AT4G27890 "AT4G27890" species... 163 8.5e-12 1
UNIPROTKB|F1STR6 - symbol:NUDC "Uncharacterized protein" ... 136 1.0e-10 2
POMBASE|SPBC19F8.02 - symbol:SPBC19F8.02 "nuclear distrib... 117 1.1e-09 2
FB|FBgn0021768 - symbol:nudC "nudC" species:7227 "Drosoph... 143 2.1e-09 1
ZFIN|ZDB-GENE-050522-483 - symbol:nudcd1 "NudC domain con... 146 2.9e-09 1
UNIPROTKB|G4N7C2 - symbol:MGG_03604 "Nuclear movement pro... 111 4.0e-09 2
UNIPROTKB|F1NE97 - symbol:NUDC "Nuclear migration protein... 123 6.5e-09 2
UNIPROTKB|Q5ZIN1 - symbol:NUDC "Nuclear migration protein... 123 6.5e-09 2
UNIPROTKB|Q9Y266 - symbol:NUDC "Nuclear migration protein... 135 1.6e-08 1
UNIPROTKB|Q17QG2 - symbol:NUDC "Nuclear migration protein... 133 2.7e-08 1
MGI|MGI:106014 - symbol:Nudc "nuclear distribution gene C... 133 2.7e-08 1
RGD|3215 - symbol:Nudc "nuclear distribution C homolog (A... 128 9.5e-08 1
GENEDB_PFALCIPARUM|PF13_0204 - symbol:PF13_0204 "nuclear ... 127 1.6e-07 1
UNIPROTKB|Q8IDW4 - symbol:PF13_0204 "Nuclear movement pro... 127 1.6e-07 1
DICTYBASE|DDB_G0286159 - symbol:nudc "nuclear distributio... 115 4.8e-07 1
UNIPROTKB|Q96RS6 - symbol:NUDCD1 "NudC domain-containing ... 120 1.8e-06 1
WB|WBGene00003829 - symbol:nud-1 species:6239 "Caenorhabd... 98 2.2e-06 2
ZFIN|ZDB-GENE-040426-899 - symbol:nudc "nuclear distribut... 114 3.3e-06 1
DICTYBASE|DDB_G0291984 - symbol:DDB_G0291984 "putative gl... 118 7.4e-06 1
MGI|MGI:1914679 - symbol:Nudcd1 "NudC domain containing 1... 109 2.7e-05 1
>TAIR|locus:2178888 [details] [associations]
symbol:AT5G58740 "AT5G58740" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 eggNOG:NOG319794
HOGENOM:HOG000282991 OMA:NREAGNC EMBL:AY074384 EMBL:AY117251
IPI:IPI00540478 RefSeq:NP_200682.1 UniGene:At.42961
ProteinModelPortal:Q8VXX3 STRING:Q8VXX3 PaxDb:Q8VXX3 PRIDE:Q8VXX3
DNASU:835988 EnsemblPlants:AT5G58740.1 GeneID:835988
KEGG:ath:AT5G58740 TAIR:At5g58740 InParanoid:Q8VXX3
PhylomeDB:Q8VXX3 ProtClustDB:CLSN2686281 ArrayExpress:Q8VXX3
Genevestigator:Q8VXX3 Uniprot:Q8VXX3
Length = 158
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 109/130 (83%), Positives = 120/130 (92%)
Query: 1 MAEKLAPEKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKG 60
MAEKLAPEKRH F+HNGQ VFEWDQTL+E+N+YI LPPNVH K F+CKIQSKHIE+GIKG
Sbjct: 1 MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60
Query: 61 NPPYLNHELTCPVKTDSSFWTLEDDVMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQK 120
NPPYLNH+L+ PVKTD SFWTLEDD+MHITL KR+KGQTWASPI+GQGQLDPY TD EQK
Sbjct: 61 NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120
Query: 121 RLMLQRFQEE 130
RLMLQRFQEE
Sbjct: 121 RLMLQRFQEE 130
>UNIPROTKB|E2RSY6 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 OMA:NREAGNC
GeneTree:ENSGT00390000001644 EMBL:AAEX03003041
ProteinModelPortal:E2RSY6 PRIDE:E2RSY6 Ensembl:ENSCAFT00000027244
NextBio:20854501 Uniprot:E2RSY6
Length = 192
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/129 (36%), Positives = 69/129 (53%)
Query: 6 AP-EKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPY 64
AP E+R + G +W QTL+E+ I + +PP ++ C +QS+H+ L + G
Sbjct: 38 APFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-I 96
Query: 65 LNHELTCPVKTDSSFWTLEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKR 121
L +L D WTLED M +T TKRD W S + + DP+V DQ Q++
Sbjct: 97 LKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRK 156
Query: 122 LMLQRFQEE 130
L L+RFQ+E
Sbjct: 157 LTLERFQKE 165
>UNIPROTKB|Q8WVJ2 [details] [associations]
symbol:NUDCD2 "NudC domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] GO:GO:0005737 EMBL:CH471062 GO:GO:0005815
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0000922
GO:GO:0000777 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
PROSITE:PS51203 EMBL:FJ215684 EMBL:AK311957 EMBL:BX538290
EMBL:BC017934 IPI:IPI00103142 RefSeq:NP_660309.1 UniGene:Hs.140443
ProteinModelPortal:Q8WVJ2 SMR:Q8WVJ2 DIP:DIP-59509N
PhosphoSite:Q8WVJ2 DMDM:67461063 PaxDb:Q8WVJ2 PeptideAtlas:Q8WVJ2
PRIDE:Q8WVJ2 DNASU:134492 Ensembl:ENST00000302764 GeneID:134492
KEGG:hsa:134492 UCSC:uc003lze.3 CTD:134492 GeneCards:GC05M162880
HGNC:HGNC:30535 HPA:HPA037385 neXtProt:NX_Q8WVJ2
PharmGKB:PA134991349 eggNOG:NOG319794 HOGENOM:HOG000282991
HOVERGEN:HBG056555 InParanoid:Q8WVJ2 OMA:NREAGNC OrthoDB:EOG4HX529
PhylomeDB:Q8WVJ2 GenomeRNAi:134492 NextBio:83386
ArrayExpress:Q8WVJ2 Bgee:Q8WVJ2 CleanEx:HS_NUDCD2
Genevestigator:Q8WVJ2 GermOnline:ENSG00000170584 Uniprot:Q8WVJ2
Length = 157
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/129 (36%), Positives = 69/129 (53%)
Query: 6 AP-EKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPY 64
AP E+R + G +W QTL+E+ I + +PP ++ C +QS+H+ L + G
Sbjct: 3 APFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGRE-I 61
Query: 65 LNHELTCPVKTDSSFWTLEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKR 121
L +L D WTLED M +T TKRD W S + + DP+V DQ Q++
Sbjct: 62 LKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRK 121
Query: 122 LMLQRFQEE 130
L L+RFQ+E
Sbjct: 122 LTLERFQKE 130
>UNIPROTKB|F1RR73 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] GO:GO:0005622
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 OMA:NREAGNC
GeneTree:ENSGT00390000001644 EMBL:CU694497 RefSeq:XP_003134131.1
Ensembl:ENSSSCT00000022563 GeneID:100515244 KEGG:ssc:100515244
Uniprot:F1RR73
Length = 157
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/129 (36%), Positives = 69/129 (53%)
Query: 6 AP-EKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPY 64
AP E+R + G +W QTL+E+ I + +PP ++ C +QS+H+ L + G
Sbjct: 3 APFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-I 61
Query: 65 LNHELTCPVKTDSSFWTLEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKR 121
L +L D WTLED M +T TKRD W S + + DP+V DQ Q++
Sbjct: 62 LKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRK 121
Query: 122 LMLQRFQEE 130
L L+RFQ+E
Sbjct: 122 LTLERFQKE 130
>MGI|MGI:1277103 [details] [associations]
symbol:Nudcd2 "NudC domain containing 2" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1277103 GO:GO:0005737 GO:GO:0005815
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0000922 GO:GO:0000777
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL646055 CTD:134492 eggNOG:NOG319794 HOGENOM:HOG000282991
HOVERGEN:HBG056555 OMA:NREAGNC OrthoDB:EOG4HX529 EMBL:AK004388
EMBL:AK005909 EMBL:AK010850 EMBL:AK012388 EMBL:AK031779
EMBL:BC005646 IPI:IPI00461281 RefSeq:NP_080299.4 UniGene:Mm.276504
PDB:2RH0 PDBsum:2RH0 ProteinModelPortal:Q9CQ48 SMR:Q9CQ48
STRING:Q9CQ48 PhosphoSite:Q9CQ48 PaxDb:Q9CQ48 PRIDE:Q9CQ48
Ensembl:ENSMUST00000020578 GeneID:52653 KEGG:mmu:52653
UCSC:uc007ily.1 GeneTree:ENSGT00390000001644 InParanoid:Q9CQ48
EvolutionaryTrace:Q9CQ48 NextBio:309279 Bgee:Q9CQ48
CleanEx:MM_NUDCD2 Genevestigator:Q9CQ48
GermOnline:ENSMUSG00000020328 Uniprot:Q9CQ48
Length = 157
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/129 (36%), Positives = 69/129 (53%)
Query: 6 AP-EKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPY 64
AP E+R + G +W QTL+E+ I + +PP ++ C +QS+H+ L + G
Sbjct: 3 APFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-I 61
Query: 65 LNHELTCPVKTDSSFWTLEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKR 121
L +L D WTLED M +T TKRD W S + + DP+V DQ Q++
Sbjct: 62 LKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRK 121
Query: 122 LMLQRFQEE 130
L L+RFQ+E
Sbjct: 122 LTLERFQKE 130
>ZFIN|ZDB-GENE-040801-49 [details] [associations]
symbol:nudcd2 "NudC domain containing 2"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040801-49 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
CTD:134492 eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:CU062437 EMBL:BC078187 IPI:IPI00491108 RefSeq:NP_001003539.1
UniGene:Dr.81887 SMR:Q6DC89 Ensembl:ENSDART00000115422
GeneID:445145 KEGG:dre:445145 InParanoid:Q6DC89 NextBio:20831908
Uniprot:Q6DC89
Length = 157
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 44/111 (39%), Positives = 64/111 (57%)
Query: 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTL 82
W QT++E+ I +N+PP +K+ C I SK IEL +K + +L D + WTL
Sbjct: 21 WYQTMEEVYIEVNVPPGTSAKEIKCNIGSKQIELRVKDQQIFKG-KLFGSTVCDEATWTL 79
Query: 83 EDD-VMHITL--TKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQRFQEE 130
ED ++ I L T R+ G W S + G+ DP+V DQ Q++L L+RFQ E
Sbjct: 80 EDKKLIRIVLMKTNREAGNCWQSLLEGEFMADPWVQDQMQRKLTLERFQRE 130
>UNIPROTKB|Q32KU8 [details] [associations]
symbol:NUDCD2 "NudC domain containing 2" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] GO:GO:0005622
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:DAAA02020941 EMBL:BC109920 EMBL:BC134768 IPI:IPI00694535
RefSeq:NP_001035643.1 UniGene:Bt.21032 SMR:Q32KU8
Ensembl:ENSBTAT00000019650 GeneID:532693 KEGG:bta:532693
InParanoid:Q32KU8 NextBio:20875773 Uniprot:Q32KU8
Length = 157
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/129 (36%), Positives = 68/129 (52%)
Query: 6 AP-EKRHRFLHNGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPY 64
AP E+R + G +W QTL+E+ I + +PP ++ C +QS+H+ L + G
Sbjct: 3 APFEERSGVVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-I 61
Query: 65 LNHELTCPVKTDSSFWTLEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKR 121
L +L D WTLED M +T TKRD W S + DP+V DQ Q++
Sbjct: 62 LKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKRDAANCWTSLLESDYAADPWVQDQMQRK 121
Query: 122 LMLQRFQEE 130
L L+RFQ+E
Sbjct: 122 LTLERFQKE 130
>RGD|1307203 [details] [associations]
symbol:Nudcd2 "NudC domain containing 2" species:10116 "Rattus
norvegicus" [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
RGD:1307203 GO:GO:0005737 GO:GO:0005815 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0000922 GO:GO:0000777 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
eggNOG:NOG319794 HOGENOM:HOG000282991 HOVERGEN:HBG056555
OMA:NREAGNC OrthoDB:EOG4HX529 GeneTree:ENSGT00390000001644
EMBL:BC088299 IPI:IPI00199722 RefSeq:NP_001009621.1 UniGene:Rn.3419
ProteinModelPortal:Q5M823 SMR:Q5M823 PRIDE:Q5M823
Ensembl:ENSRNOT00000004339 GeneID:287199 KEGG:rno:287199
UCSC:RGD:1307203 InParanoid:Q5M823 NextBio:625692
Genevestigator:Q5M823 GermOnline:ENSRNOG00000003225 Uniprot:Q5M823
Length = 157
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 42/112 (37%), Positives = 62/112 (55%)
Query: 22 EWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWT 81
+W QTL+E+ I + +PP ++ C +QS+H+ L + G L +L D WT
Sbjct: 20 QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 78
Query: 82 LEDDVMH---ITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQRFQEE 130
LED M +T TKRD W S + + DP+V DQ Q++L L+RFQ+E
Sbjct: 79 LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKE 130
>UNIPROTKB|E1BUG9 [details] [associations]
symbol:NUDCD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
GO:GO:0005622 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:134492
OMA:NREAGNC GeneTree:ENSGT00390000001644 EMBL:AADN02035885
IPI:IPI00592545 RefSeq:XP_414494.2 UniGene:Gga.12128
Ensembl:ENSGALT00000002649 GeneID:416162 KEGG:gga:416162
NextBio:20819666 Uniprot:E1BUG9
Length = 157
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 42/111 (37%), Positives = 60/111 (54%)
Query: 23 WDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFWTL 82
W QTL+E+ I + +PP +K C +QS+ + L + G L +L D WTL
Sbjct: 21 WYQTLEEVFIEVQVPPGTRAKDVCCSLQSRRVALSVCGRE-VLQGKLFDSTIADEGTWTL 79
Query: 83 ED-DVMHITL--TKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQRFQEE 130
ED ++ I L T RD G W S + + DP+V DQ Q++L L+RFQ E
Sbjct: 80 EDRKLIRIVLMKTNRDAGNCWTSLLENEYAADPWVQDQMQRKLTLERFQRE 130
>TAIR|locus:2178431 [details] [associations]
symbol:BOB1 "BOBBER1" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=RCA;IDA] [GO:0009408 "response to heat"
evidence=IEP;RCA;IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010450 "inflorescence meristem growth" evidence=IMP]
[GO:0032502 "developmental process" evidence=IMP] [GO:0048448
"stamen morphogenesis" evidence=IMP] [GO:0048833 "specification of
floral organ number" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] GO:GO:0005829 EMBL:CP002688 GO:GO:0006457
GO:GO:0009555 GO:GO:0009408 EMBL:AB020754 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0009965 GO:GO:0009880 EMBL:BT003074
EMBL:AK227305 EMBL:AY087741 IPI:IPI00519101 RefSeq:NP_200152.1
UniGene:At.27931 ProteinModelPortal:Q9LV09 SMR:Q9LV09 IntAct:Q9LV09
STRING:Q9LV09 PaxDb:Q8LAL5 PRIDE:Q9LV09 EnsemblPlants:AT5G53400.1
GeneID:835421 KEGG:ath:AT5G53400 TAIR:At5g53400 eggNOG:NOG292552
HOGENOM:HOG000182245 InParanoid:Q9LV09 OMA:CYWNIED PhylomeDB:Q9LV09
ProtClustDB:CLSN2915895 Genevestigator:Q9LV09 GO:GO:0010450
GO:GO:0048833 GO:GO:0048448 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 Uniprot:Q9LV09
Length = 304
Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFW 80
+ W Q L E+ + I +P ++ C+I+ +++G+KG P ++ EL VK D +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206
Query: 81 TLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
+ED V+ I LTK D+ + W + G+ ++D + E +L
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKL 249
>TAIR|locus:2137345 [details] [associations]
symbol:AT4G27890 "AT4G27890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078579
EMBL:AL161571 InterPro:IPR008978 SUPFAM:SSF49764 eggNOG:NOG292552
HOGENOM:HOG000182245 ProtClustDB:CLSN2915895 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AY142524
IPI:IPI00547347 PIR:T09028 RefSeq:NP_194518.1 UniGene:At.32064
ProteinModelPortal:Q9STN7 SMR:Q9STN7 EnsemblPlants:AT4G27890.1
GeneID:828902 KEGG:ath:AT4G27890 TAIR:At4g27890 InParanoid:Q9STN7
OMA:AIISEME PhylomeDB:Q9STN7 Genevestigator:Q9STN7 Uniprot:Q9STN7
Length = 293
Score = 163 (62.4 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSFW 80
+ W Q L E+ I I +P S+ C+I+ +++G+KG ++ E VK D FW
Sbjct: 136 YSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFW 195
Query: 81 TLEDDVM-HITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
+ED M + LTK+D+ + W + G+ ++D + E +L
Sbjct: 196 NIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKL 238
>UNIPROTKB|F1STR6 [details] [associations]
symbol:NUDC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
OMA:NHHNQLA EMBL:FP015947 Ensembl:ENSSSCT00000003960 Uniprot:F1STR6
Length = 331
Score = 136 (52.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 33/114 (28%), Positives = 57/114 (50%)
Query: 14 LHNGQTV--FEWDQTLDEINIYINLPPN--VHSKQFYCKIQSKHIELGIKGNPPYLNHEL 69
L NG + + W QTL E+++ + N + K IQ +HI +G+KG P + EL
Sbjct: 164 LGNGADLPNYRWTQTLSELDLAVPFRVNFRLKGKDVVVDIQRRHIRVGLKGQPAVIEGEL 223
Query: 70 TCPVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VK + S W +ED V+ + L K +K + W+ + +++ + E +L
Sbjct: 224 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKL 277
Score = 38 (18.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 115 TDQEQKRLMLQRFQEE 130
T EQK+ +L++F ++
Sbjct: 304 TSDEQKKQILKKFMDQ 319
>POMBASE|SPBC19F8.02 [details] [associations]
symbol:SPBC19F8.02 "nuclear distribution protein NUDC
homolog" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0010972 "negative regulation of
G2/M transition of mitotic cell cycle" evidence=IMP]
PomBase:SPBC19F8.02 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 EMBL:CU329671 GenomeReviews:CU329671_GR
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874 eggNOG:NOG292552
HOGENOM:HOG000182245 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 GO:GO:0010972 HSSP:O35685 OMA:MEWWAHV
PIR:T39825 RefSeq:NP_596344.1 ProteinModelPortal:O60166
EnsemblFungi:SPBC19F8.02.1 GeneID:2540736 KEGG:spo:SPBC19F8.02
OrthoDB:EOG444PVR NextBio:20801858 Uniprot:O60166
Length = 166
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPP----YLNHELTCPVKTD 76
+EWDQT+ +++I I++P +K + S H +L I+ N P L+ L + D
Sbjct: 11 YEWDQTIADVDIVIHVPKGTRAKSLQVDM-SNH-DLKIQINVPERKVLLSGPLEKQINLD 68
Query: 77 SSFWTLED-DVMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
S WT+E+ + + I L K +K + W+ I G +D + E +L
Sbjct: 69 ESTWTVEEQERLVIHLEKSNKMEWWSCVIKGHPSIDIGSIEPENSKL 115
Score = 35 (17.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 5/16 (31%), Positives = 13/16 (81%)
Query: 115 TDQEQKRLMLQRFQEE 130
TD+++++ +LQ F ++
Sbjct: 138 TDEQKRKDVLQNFMKQ 153
>FB|FBgn0021768 [details] [associations]
symbol:nudC "nudC" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007097 "nuclear
migration" evidence=ISS;NAS] [GO:0048477 "oogenesis" evidence=NAS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
GO:GO:0005737 GO:GO:0005875 EMBL:AE014296 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0007097 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 OMA:NHHNQLA EMBL:AY071485 EMBL:AY328470
RefSeq:NP_001246805.1 RefSeq:NP_648923.1 UniGene:Dm.5904 SMR:Q9VVA6
STRING:Q9VVA6 EnsemblMetazoa:FBtr0075328 EnsemblMetazoa:FBtr0305912
GeneID:39879 KEGG:dme:Dmel_CG9710 UCSC:CG9710-RA
FlyBase:FBgn0021768 InParanoid:Q9VVA6 OrthoDB:EOG45QFW8
GenomeRNAi:39879 NextBio:815862 Uniprot:Q9VVA6
Length = 332
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 16 NGQTV--FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTC 71
NG T+ + W QTL+E+ + I NL + ++ I K +++GIKG P ++ EL
Sbjct: 166 NGCTLENYTWTQTLEEVELKIPFNLTFGLRARDLVISIGKKSLKVGIKGQTPIIDGELCG 225
Query: 72 PVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VKT+ S W L+D + ITL K +K W+ + ++ + E +L
Sbjct: 226 EVKTEESVWVLQDSKTVMITLDKINKMNWWSRLVTTDPEISTRKINPESSKL 277
>ZFIN|ZDB-GENE-050522-483 [details] [associations]
symbol:nudcd1 "NudC domain containing 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] ZFIN:ZDB-GENE-050522-483 GO:GO:0005634 GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:BC095378
IPI:IPI00734918 RefSeq:NP_001018463.1 UniGene:Dr.77923
ProteinModelPortal:Q503C8 GeneID:553654 KEGG:dre:553654 CTD:84955
eggNOG:NOG276664 HOGENOM:HOG000007751 HOVERGEN:HBG104995
InParanoid:Q503C8 OrthoDB:EOG4T7834 NextBio:20880388
ArrayExpress:Q503C8 Uniprot:Q503C8
Length = 585
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/112 (25%), Positives = 57/112 (50%)
Query: 16 NGQTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKT 75
N ++ W QT +++ + + LP K+ + + + P L+ +L PV
Sbjct: 276 NSDPIYFWQQTEEDVTLCVRLPEGTTKDDIRFKLTVDCLRVRVGDYAPLLDGQLFAPVDP 335
Query: 76 DSSFWTLEDDV-MHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQR 126
++S WT+ DD + ++L KR +G W+ ++G + + Y+ + EQK + QR
Sbjct: 336 EASTWTMNDDKSLEVSLQKRSEGPLWSEVVLGDRRGE-YLMNDEQKSQLQQR 386
>UNIPROTKB|G4N7C2 [details] [associations]
symbol:MGG_03604 "Nuclear movement protein nudC"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008978
SUPFAM:SSF49764 EMBL:CM001234 InterPro:IPR007052 InterPro:IPR017447
Pfam:PF04969 PROSITE:PS51203 RefSeq:XP_003716300.1
ProteinModelPortal:G4N7C2 EnsemblFungi:MGG_03604T0 GeneID:2676687
KEGG:mgr:MGG_03604 Uniprot:G4N7C2
Length = 191
Score = 111 (44.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 21 FEWDQTLDEINIYINL---PPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDS 77
++W QT+ +I++ I L K +I+ +H+ G+KG+ P ++ +L V+ D
Sbjct: 27 YKWAQTIGDIDVTIKLGEGSEKYKGKDLKVEIKKQHLTAGVKGSDPIIDGDLPHAVRVDE 86
Query: 78 SFWTLEDDV-----MHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
S WTL + + + L K +K + W + ++D + E +L
Sbjct: 87 STWTLTTNPDGTKNLEVHLDKVNKMEWWPHVVTDAPKIDVTKINPENSKL 136
Score = 37 (18.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 115 TDQEQKRL-MLQRFQEE 130
+ EQK+L +L +FQ+E
Sbjct: 163 SSDEQKKLDLLAKFQKE 179
>UNIPROTKB|F1NE97 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
OMA:NHHNQLA IPI:IPI00603049 EMBL:AADN02051291 PRIDE:F1NE97
Ensembl:ENSGALT00000001317 Uniprot:F1NE97
Length = 341
Score = 123 (48.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 21 FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSS 78
+ W QTL E+++ I + + K IQ + + +G+KG+PP ++ EL VK + S
Sbjct: 182 YRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEES 241
Query: 79 FWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
W +ED + + L K +K + W + +++ + E +L
Sbjct: 242 SWLIEDGKTVTVHLEKVNKMEWWNKLVSTDPEINTKKINPENSKL 286
Score = 35 (17.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 5/16 (31%), Positives = 14/16 (87%)
Query: 115 TDQEQKRLMLQRFQEE 130
+D+++K+ +L++F E+
Sbjct: 314 SDEQKKQDILKKFMEQ 329
>UNIPROTKB|Q5ZIN1 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0005874 eggNOG:NOG292552 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
OrthoDB:EOG4640CG EMBL:AJ720753 IPI:IPI00603049
RefSeq:NP_001006311.1 UniGene:Gga.2521 ProteinModelPortal:Q5ZIN1
SMR:Q5ZIN1 STRING:Q5ZIN1 PRIDE:Q5ZIN1 GeneID:419578 KEGG:gga:419578
InParanoid:Q5ZIN1 NextBio:20822610 Uniprot:Q5ZIN1
Length = 341
Score = 123 (48.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 21 FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSS 78
+ W QTL E+++ I + + K IQ + + +G+KG+PP ++ EL VK + S
Sbjct: 182 YRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVIDGELFNEVKVEES 241
Query: 79 FWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
W +ED + + L K +K + W + +++ + E +L
Sbjct: 242 SWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKL 286
Score = 35 (17.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 5/16 (31%), Positives = 14/16 (87%)
Query: 115 TDQEQKRLMLQRFQEE 130
+D+++K+ +L++F E+
Sbjct: 314 SDEQKKQDILKKFMEQ 329
>UNIPROTKB|Q9Y266 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9606
"Homo sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=TAS] [GO:0008283
"cell proliferation" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] GO:GO:0007275 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0008283 GO:GO:0043434 GO:GO:0000910 InterPro:IPR008978
SUPFAM:SSF49764 GO:GO:0005874 GO:GO:0007097 GO:GO:0000236
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AL356390
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
OMA:NHHNQLA EMBL:AF130736 EMBL:AF125465 EMBL:AF100760 EMBL:AB019408
EMBL:AF086922 EMBL:AL136725 EMBL:BC002399 EMBL:BC003132
EMBL:BC006147 EMBL:BC007280 EMBL:BC015153 EMBL:BC021139
IPI:IPI00550746 RefSeq:NP_006591.1 UniGene:Hs.263812 PDB:3QOR
PDBsum:3QOR ProteinModelPortal:Q9Y266 SMR:Q9Y266 IntAct:Q9Y266
MINT:MINT-1132616 STRING:Q9Y266 PhosphoSite:Q9Y266 DMDM:62287138
PaxDb:Q9Y266 PeptideAtlas:Q9Y266 PRIDE:Q9Y266 DNASU:10726
Ensembl:ENST00000321265 Ensembl:ENST00000435827
Ensembl:ENST00000452707 GeneID:10726 KEGG:hsa:10726 UCSC:uc001bng.1
GeneCards:GC01P027226 HGNC:HGNC:8045 HPA:HPA027183 HPA:HPA028105
MIM:610325 neXtProt:NX_Q9Y266 PharmGKB:PA31827 InParanoid:Q9Y266
PhylomeDB:Q9Y266 GenomeRNAi:10726 NextBio:40723 Bgee:Q9Y266
CleanEx:HS_NUDC Genevestigator:Q9Y266 GermOnline:ENSG00000090273
Uniprot:Q9Y266
Length = 331
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 14 LHNGQTV--FEWDQTLDEINIYINLPPN--VHSKQFYCKIQSKHIELGIKGNPPYLNHEL 69
L NG + + W QTL E+++ + N + K IQ +H+ +G+KG P ++ EL
Sbjct: 163 LGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGEL 222
Query: 70 TCPVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VK + S W +ED V+ + L K +K + W+ + +++ + E +L
Sbjct: 223 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKL 276
>UNIPROTKB|Q17QG2 [details] [associations]
symbol:NUDC "Nuclear migration protein nudC" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
EMBL:BC118381 IPI:IPI00712148 RefSeq:NP_001069075.1 UniGene:Bt.5486
ProteinModelPortal:Q17QG2 SMR:Q17QG2 STRING:Q17QG2 PRIDE:Q17QG2
Ensembl:ENSBTAT00000005789 GeneID:513277 KEGG:bta:513277 CTD:10726
HOVERGEN:HBG052690 InParanoid:Q17QG2 OMA:NHHNQLA OrthoDB:EOG4640CG
NextBio:20870793 Uniprot:Q17QG2
Length = 332
Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 14 LHNGQTV--FEWDQTLDEINIYINLPPN--VHSKQFYCKIQSKHIELGIKGNPPYLNHEL 69
L NG + + W QTL E+++ + N + K IQ +H+ +G+KG P ++ EL
Sbjct: 164 LGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGEL 223
Query: 70 TCPVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VK + S W +ED V+ + L K +K + W+ + +++ + E +L
Sbjct: 224 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKL 277
>MGI|MGI:106014 [details] [associations]
symbol:Nudc "nuclear distribution gene C homolog
(Aspergillus)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:106014 GO:GO:0005634 GO:GO:0005794 GO:GO:0051301
GO:GO:0007067 GO:GO:0043434 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0005874 GO:GO:0007097 eggNOG:NOG292552 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 HOVERGEN:HBG052690 OMA:NHHNQLA OrthoDB:EOG4640CG
EMBL:X81443 EMBL:Y15522 EMBL:AK032673 EMBL:AK146323 EMBL:BC011253
IPI:IPI00132942 RefSeq:NP_035078.1 UniGene:Mm.69 PDB:1WFI PDB:2CR0
PDBsum:1WFI PDBsum:2CR0 ProteinModelPortal:O35685 SMR:O35685
IntAct:O35685 MINT:MINT-4104807 STRING:O35685 PhosphoSite:O35685
REPRODUCTION-2DPAGE:O35685 PaxDb:O35685 PRIDE:O35685
Ensembl:ENSMUST00000030665 GeneID:18221 KEGG:mmu:18221
InParanoid:O35685 EvolutionaryTrace:O35685 NextBio:293640
Bgee:O35685 CleanEx:MM_NUDC Genevestigator:O35685
GermOnline:ENSMUSG00000028851 Uniprot:O35685
Length = 332
Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 14 LHNGQTV--FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHEL 69
L NG + + W QTL E+++ + + + K IQ +H+ +G+KG PP ++ EL
Sbjct: 164 LGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGEL 223
Query: 70 TCPVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VK + S W +ED V+ + L K +K + W + +++ + E +L
Sbjct: 224 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKL 277
>RGD|3215 [details] [associations]
symbol:Nudc "nuclear distribution C homolog (A. nidulans)"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0043434 "response to peptide hormone stimulus" evidence=IEP]
[GO:0051301 "cell division" evidence=IEA] RGD:3215 GO:GO:0005634
GO:GO:0005794 GO:GO:0051301 GO:GO:0007067 GO:GO:0043434
InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0005874 GO:GO:0007097
eggNOG:NOG292552 HOGENOM:HOG000182245 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
GeneTree:ENSGT00530000063486 InterPro:IPR025934 Pfam:PF14050
CTD:10726 HOVERGEN:HBG052690 OMA:NHHNQLA OrthoDB:EOG4640CG
EMBL:X82445 EMBL:BC065581 IPI:IPI00210009 PIR:A55897
RefSeq:NP_058967.1 UniGene:Rn.10413 ProteinModelPortal:Q63525
SMR:Q63525 STRING:Q63525 PhosphoSite:Q63525 PRIDE:Q63525
Ensembl:ENSRNOT00000009933 GeneID:29648 KEGG:rno:29648 UCSC:RGD:3215
InParanoid:Q63525 NextBio:609926 Genevestigator:Q63525
GermOnline:ENSRNOG00000007399 Uniprot:Q63525
Length = 332
Score = 128 (50.1 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 31/114 (27%), Positives = 57/114 (50%)
Query: 14 LHNGQTV--FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHEL 69
L NG + + W QTL E+++ + + + K IQ +H+ +G+KG P ++ EL
Sbjct: 164 LGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQAPVIDGEL 223
Query: 70 TCPVKTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
VK + S W +ED V+ + L K +K + W + +++ + E +L
Sbjct: 224 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKINPENSKL 277
>GENEDB_PFALCIPARUM|PF13_0204 [details] [associations]
symbol:PF13_0204 "nuclear movement protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 29/110 (26%), Positives = 58/110 (52%)
Query: 15 HNGQT-VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPV 73
+ G+T + W Q+++ +++YI+ N+ +K I K + + +K N ++ E +
Sbjct: 209 NGGKTDKYVWTQSINTLDMYIDTKDNIKTKDIKIDITYKKLYVKVK-NQVLIDGEFFKQI 267
Query: 74 KTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
K + S WTLED+ ++HI + K + + W + I G ++D E R+
Sbjct: 268 KPEESIWTLEDNKIIHIFIEKLNGMEWWNTVIKGDAEIDVKKIVPENSRM 317
>UNIPROTKB|Q8IDW4 [details] [associations]
symbol:PF13_0204 "Nuclear movement protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008978 SUPFAM:SSF49764 HOGENOM:HOG000182245
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
EMBL:AL844509 InterPro:IPR025934 Pfam:PF14050 RefSeq:XP_001350096.1
ProteinModelPortal:Q8IDW4 PRIDE:Q8IDW4
EnsemblProtists:PF13_0204:mRNA GeneID:814173 KEGG:pfa:PF13_0204
EuPathDB:PlasmoDB:PF3D7_1336800 ProtClustDB:CLSZ2514982
Uniprot:Q8IDW4
Length = 386
Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 29/110 (26%), Positives = 58/110 (52%)
Query: 15 HNGQT-VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPV 73
+ G+T + W Q+++ +++YI+ N+ +K I K + + +K N ++ E +
Sbjct: 209 NGGKTDKYVWTQSINTLDMYIDTKDNIKTKDIKIDITYKKLYVKVK-NQVLIDGEFFKQI 267
Query: 74 KTDSSFWTLEDD-VMHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRL 122
K + S WTLED+ ++HI + K + + W + I G ++D E R+
Sbjct: 268 KPEESIWTLEDNKIIHIFIEKLNGMEWWNTVIKGDAEIDVKKIVPENSRM 317
>DICTYBASE|DDB_G0286159 [details] [associations]
symbol:nudc "nuclear distribution protein C homolog"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000741 "karyogamy" evidence=IEA] dictyBase:DDB_G0286159
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR InterPro:IPR008978 SUPFAM:SSF49764
EMBL:AAFI02000085 GO:GO:0005874 eggNOG:NOG292552 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0000741
RefSeq:XP_637884.1 HSSP:O35685 ProteinModelPortal:Q54M64
STRING:Q54M64 EnsemblProtists:DDB0266415 GeneID:8625481
KEGG:ddi:DDB_G0286159 OMA:MEWWAHV ProtClustDB:CLSZ2728900
Uniprot:Q54M64
Length = 171
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 21 FEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIEL-GIKGNPPYLNHELTCPVKTDSSF 79
+ W QTL++ + I L V SK + KI + H+ + + N ++ +L VK
Sbjct: 13 YTWSQTLNDCTLSIKLENPVKSKDLFIKIDNDHLTVKNLITNDTIIDGKLYKNVKKSDCN 72
Query: 80 WTLEDDV-MHITLTKRDKGQTWASPIMGQGQLDPYVTDQEQKRLMLQRFQEE 130
WTLE + I L K KGQ W S I+ QG+ + VT + + L F E
Sbjct: 73 WTLESGKNLEIELFKL-KGQEWWSCII-QGESEIDVTQIKPQNSSLSDFDGE 122
>UNIPROTKB|Q96RS6 [details] [associations]
symbol:NUDCD1 "NudC domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005634 GO:GO:0005737
InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 CTD:84955
eggNOG:NOG276664 HOVERGEN:HBG104995 OrthoDB:EOG4T7834 EMBL:AF283301
EMBL:AF521133 EMBL:AF283302 EMBL:AK027897 EMBL:AK301278
EMBL:AC021237 EMBL:BC000967 EMBL:BC031258 EMBL:BC043406
EMBL:AL832317 IPI:IPI00306398 IPI:IPI00789225 IPI:IPI00797537
RefSeq:NP_001121683.1 RefSeq:NP_116258.2 UniGene:Hs.380291
ProteinModelPortal:Q96RS6 SMR:Q96RS6 IntAct:Q96RS6 STRING:Q96RS6
PhosphoSite:Q96RS6 DMDM:296439243 PaxDb:Q96RS6 PRIDE:Q96RS6
Ensembl:ENST00000239690 Ensembl:ENST00000427660 GeneID:84955
KEGG:hsa:84955 UCSC:uc003yna.3 UCSC:uc003ynb.4 UCSC:uc010mcl.3
GeneCards:GC08M110323 H-InvDB:HIX0007725 HGNC:HGNC:24306
HPA:HPA023183 MIM:606109 neXtProt:NX_Q96RS6 PharmGKB:PA134985670
InParanoid:Q96RS6 OMA:NRKEGRQ PhylomeDB:Q96RS6 ChiTaRS:NUDCD1
GenomeRNAi:84955 NextBio:75454 ArrayExpress:Q96RS6 Bgee:Q96RS6
CleanEx:HS_NUDCD1 Genevestigator:Q96RS6 Uniprot:Q96RS6
Length = 583
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDS 77
+ ++ W QT D++ + I LP + + + HI + +K + +L +L + +S
Sbjct: 275 EPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDHINIVLKDHQ-FLEGKLYSSIDHES 333
Query: 78 SFWTL-EDDVMHITLTKRDKGQTWASPIMG--QGQLDPYVTDQEQKRLMLQR 126
S W + E + + I+L K+++G TW ++G QG+L + D Q + +R
Sbjct: 334 STWIIKESNSLEISLIKKNEGLTWPELVIGDKQGEL---IRDSAQCAAIAER 382
>WB|WBGene00003829 [details] [associations]
symbol:nud-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0035047 "centrosomal and
pronuclear rotation" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IGI;IMP]
[GO:0048489 "synaptic vesicle transport" evidence=IMP] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0042026 "protein
refolding" evidence=IDA] [GO:0051082 "unfolded protein binding"
evidence=IDA] GO:GO:0009792 GO:GO:0002009 GO:GO:0035046
GO:GO:0040010 GO:GO:0006915 GO:GO:0051082 GO:GO:0040011
GO:GO:0000910 GO:GO:0040035 InterPro:IPR008978 SUPFAM:SSF49764
GO:GO:0048489 GO:GO:0040025 GO:GO:0042026 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0051932
GO:GO:0035047 EMBL:Z81546 GeneTree:ENSGT00530000063486
InterPro:IPR025934 Pfam:PF14050 OMA:NHHNQLA EMBL:AF164431
PIR:T22528 RefSeq:NP_499749.1 UniGene:Cel.19491
ProteinModelPortal:G5EE74 SMR:G5EE74 EnsemblMetazoa:F53A2.4.1
EnsemblMetazoa:F53A2.4.2 GeneID:176754 KEGG:cel:CELE_F53A2.4
CTD:176754 WormBase:F53A2.4 NextBio:893864 Uniprot:G5EE74
Length = 320
Score = 98 (39.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 21 FEWDQTLDEINIYINLPPN--VHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSS 78
++W QTL E+ + I + + S+ KI+ + +G+K P ++ +L +K ++
Sbjct: 161 YQWTQTLQELEVKIPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVENC 220
Query: 79 FWTLEDD-VMHITLTKRDKGQTW 100
W +E+ + +TL K + + W
Sbjct: 221 NWVIENGKAIVLTLEKINDMEWW 243
Score = 36 (17.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 115 TDQEQKRLMLQRFQEE 130
+D+++K MLQ+F ++
Sbjct: 293 SDEKKKHDMLQQFMKQ 308
>ZFIN|ZDB-GENE-040426-899 [details] [associations]
symbol:nudc "nuclear distribution gene C homolog"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-040426-899 InterPro:IPR008978 SUPFAM:SSF49764
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
InterPro:IPR025934 Pfam:PF14050 CTD:10726 HOVERGEN:HBG052690
EMBL:BC045909 IPI:IPI00513554 RefSeq:NP_957213.1 UniGene:Dr.19967
ProteinModelPortal:Q7ZVD2 SMR:Q7ZVD2 STRING:Q7ZVD2 GeneID:393893
KEGG:dre:393893 NextBio:20814873 ArrayExpress:Q7ZVD2 Bgee:Q7ZVD2
Uniprot:Q7ZVD2
Length = 333
Score = 114 (45.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 21 FEWDQTLDEINIYI--NLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSS 78
+ W Q+L E+++ + ++ + K +Q + +++G+KG+PP ++ +L VK + S
Sbjct: 174 YRWTQSLSEVDLVVPFDVSFRLKGKDVVVDVQRRTLKVGLKGHPPLIDGQLFNEVKVEES 233
Query: 79 FWTLEDD-VMHITLTKRDKGQTW 100
W +ED V+ I K +K + W
Sbjct: 234 SWLIEDGKVVTIHFEKINKMEWW 256
>DICTYBASE|DDB_G0291984 [details] [associations]
symbol:DDB_G0291984 "putative glutaminase"
species:44689 "Dictyostelium discoideum" [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0004359 "glutaminase activity"
evidence=IEA] Pfam:PF00018 InterPro:IPR001452 InterPro:IPR015868
Pfam:PF04960 PRINTS:PR00452 PROSITE:PS50002 SMART:SM00326
dictyBase:DDB_G0291984 EMBL:AAFI02000187 SUPFAM:SSF50044
InterPro:IPR008978 SUPFAM:SSF49764 Gene3D:3.40.710.10
InterPro:IPR012338 SUPFAM:SSF56601 InterPro:IPR011511 Pfam:PF07653
GO:GO:0006541 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
PROSITE:PS51203 eggNOG:COG2066 GO:GO:0004359 RefSeq:XP_629837.1
ProteinModelPortal:Q54DN5 EnsemblProtists:DDB0201634 GeneID:8628518
KEGG:ddi:DDB_G0291984 InParanoid:Q54DN5 OMA:LYSILCE Uniprot:Q54DN5
Length = 1222
Score = 118 (46.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 20 VFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDSSF 79
+F+W Q+ + + + N+P NV + + +I S I LG+KG LN E T S
Sbjct: 1 MFKWHQSNNLVYVTFNIPANVTKQDIHAEITSSSIGLGVKGFG--LNCEGTLFSSIKGSK 58
Query: 80 WTLEDDVMHITLTKRDKGQTWA 101
W ++DD + + + K+ G W+
Sbjct: 59 WAIKDDTVQVQMDKQQTGVKWS 80
>MGI|MGI:1914679 [details] [associations]
symbol:Nudcd1 "NudC domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1914679 GO:GO:0005634
GO:GO:0005737 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 UniGene:Mm.490404
CTD:84955 eggNOG:NOG276664 HOGENOM:HOG000007751 HOVERGEN:HBG104995
OrthoDB:EOG4T7834 OMA:NRKEGRQ ChiTaRS:NUDCD1 EMBL:AF521132
EMBL:AK077673 EMBL:AK167855 EMBL:AK168122 EMBL:BC031583
IPI:IPI00342259 RefSeq:NP_001107026.1 RefSeq:NP_080425.3
ProteinModelPortal:Q6PIP5 SMR:Q6PIP5 STRING:Q6PIP5
PhosphoSite:Q6PIP5 PaxDb:Q6PIP5 PRIDE:Q6PIP5
Ensembl:ENSMUST00000038719 GeneID:67429 KEGG:mmu:67429
UCSC:uc007vpq.2 GeneTree:ENSGT00390000007776 InParanoid:Q6PIP5
NextBio:324540 Bgee:Q6PIP5 CleanEx:MM_NUDCD1 Genevestigator:Q6PIP5
Uniprot:Q6PIP5
Length = 582
Score = 109 (43.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 28/111 (25%), Positives = 57/111 (51%)
Query: 18 QTVFEWDQTLDEINIYINLPPNVHSKQFYCKIQSKHIELGIKGNPPYLNHELTCPVKTDS 77
+ ++ W Q+ D++ + + LP + + + +I + +K + L +L + +
Sbjct: 274 EPLYYWQQSEDDLTVTVRLPESSTKEDIQIQFLPDNINIKLK-DIQVLEGKLYSSIDHEG 332
Query: 78 SFWTL-EDDVMHITLTKRDKGQTWASPIMG--QGQL--DPYVTDQEQKRLM 123
S WT+ E+D + I+L K+++G W ++G QG+L DP +RLM
Sbjct: 333 STWTIKENDSLEISLIKKNEGLMWPELVVGDKQGELLRDPAQCAAIAERLM 383
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 130 130 0.00091 102 3 11 22 0.41 31
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 606 (64 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.86u 0.12s 13.98t Elapsed: 00:00:01
Total cpu time: 13.87u 0.12s 13.99t Elapsed: 00:00:01
Start: Fri May 10 07:58:24 2013 End: Fri May 10 07:58:25 2013