BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032942
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160 OS=Arabidopsis thaliana
GN=At2g34160 PE=1 SV=1
Length = 130
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 116/129 (89%), Gaps = 2/129 (1%)
Query: 1 MEEITEGVNNMNLAVDANKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60
MEEIT+GVNNMNLA D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIAT
Sbjct: 1 MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60
Query: 61 VVTVAEILKNNGLAVEKKIMTSTVDMRDESRGRPVQKAKIEIWLEKTANFDELMAAAAEE 120
VVTV EILKNNG AVEKKIMTSTVD++D++RGRPVQKAKIEI L K+ FDELMAAA EE
Sbjct: 61 VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120
Query: 121 RDVGDGEEQ 129
++ D E Q
Sbjct: 121 KE--DAEAQ 127
>sp|Q30S64|HIS1_SULDN ATP phosphoribosyltransferase OS=Sulfurimonas denitrificans (strain
ATCC 33889 / DSM 1251) GN=hisG PE=3 SV=1
Length = 209
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 36 VNLAKRYMQQ----------HNEVELSAL-GMA--IATVVTVAEILKNNGLAVEKKIMTS 82
VN+ KRY ++ + +EL+ L G+A I VV +K NGL V + IMTS
Sbjct: 114 VNITKRYFEERAVSVDIIKLYGSIELAPLIGLADMIVDVVETGSTMKQNGLEVVEDIMTS 173
Query: 83 T 83
+
Sbjct: 174 S 174
>sp|Q8NJS1|ATG26_LEPMC Sterol 3-beta-glucosyltransferase OS=Leptosphaeria maculans
GN=ATG26 PE=3 SV=1
Length = 1456
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 62 VTVAEILKNNGLAVEKKIMTSTVDMRDESRGRP---VQKAKIEIWLEKTANFDELMAAAA 118
+TV IL+N + + +S VD DE+ +Q+A+ + ++KT N E++ AAA
Sbjct: 874 ITVLRILENTKYLEDDQSSSSGVDSNDEAAKAEHDLLQQAREDNNVDKTKNLSEIVRAAA 933
Query: 119 EER 121
++R
Sbjct: 934 DDR 936
>sp|P60851|ALBA_NANEQ DNA/RNA-binding protein Alba OS=Nanoarchaeum equitans (strain
Kin4-M) GN=albA PE=3 SV=1
Length = 90
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 29 KKPLFFYV-NLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVD-- 85
KKPL YV + ++MQ NEV + A G I+ V VAE ++ LA + + +D
Sbjct: 8 KKPLTNYVMAVVMQFMQGANEVVIKARGRNISRAVDVAERVRKRFLAGQVDVGDIKIDSE 67
Query: 86 -MRDESRGRPVQKAKIEIWLEK 106
+ D + G+ + IEI L K
Sbjct: 68 EVVDPATGQKRTVSTIEIKLVK 89
>sp|Q971T6|ALBA2_SULTO DNA/RNA-binding protein Alba 2 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=albA2 PE=3 SV=1
Length = 90
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 17 ANKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKN---NGL 73
K N I +S TK+ + +++ + Q ++EVEL +G +I V V LK+ +G+
Sbjct: 3 VKKPNEILISRTKRVEDYVLDVIVMFNQGYDEVELKGVGNSIYKAVEVYNQLKDRLGDGI 62
Query: 74 AVEKKIMTSTVDMR 87
+EK + S V R
Sbjct: 63 ILEKADIGSEVKDR 76
>sp|A5CWJ0|HIS1_VESOH ATP phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA) GN=hisG PE=3 SV=1
Length = 205
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 1 MEEITEGVNNMNLAVDANKKNRIQVSNTKKPLFFYVNLAKRYMQQ----------HNEVE 50
E + G+ L V A KNR++ NT K YVN KRY Q + +E
Sbjct: 83 FEVLDLGIAKCKLMVAAESKNRLK-QNTLKVATKYVNSTKRYFQNKGQSCEIIKLYGAME 141
Query: 51 LS---ALGMAIATVVTVAEILKNNGL 73
L+ L I +V LK NGL
Sbjct: 142 LAPKVGLAHCIVDLVDTGNTLKANGL 167
>sp|Q2VPU4|MLXIP_MOUSE MLX-interacting protein OS=Mus musculus GN=Mlxip PE=1 SV=1
Length = 917
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 4 ITEGVNNMNLAVDANKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEV-----ELSALGMAI 58
I G N +N + N K +K + + L + MQ E E+ L
Sbjct: 733 IRMGFNTLNSLISNNSKQTSHAITLQKTMEYITKLQQERMQMQEEARRLREEIEELN--- 789
Query: 59 ATVVTVAEILKNNGLAVEKKIMTSTVDMRDE-SRGRPVQKAKIEIW 103
T+++ ++L G+ V + + DM DE + R +Q K I+
Sbjct: 790 TTIISCQQLLPATGVPVNCRQLDHMRDMFDEYVKSRTLQNWKFWIF 835
>sp|A9A323|ALBA_NITMS DNA/RNA-binding protein Alba OS=Nitrosopumilus maritimus (strain
SCM1) GN=albA PE=3 SV=1
Length = 95
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 29 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEIL----KNNGLAV-EKKIMTST 83
KKPL YV + V + A G++I V VA+I+ +N G ++ E KI + +
Sbjct: 13 KKPLMAYVTSTLIQLANIPSVNIKARGLSIGRAVDVAQIIARKTENAGYSIGEIKIGSES 72
Query: 84 VDMRDESRGRPVQKAKIEI 102
++ +D R R V +IE+
Sbjct: 73 LESQD-GRTRNVSTIEIEV 90
>sp|O66820|APGM_AQUAE Probable 2,3-bisphosphoglycerate-independent phosphoglycerate
mutase OS=Aquifex aeolicus (strain VF5) GN=apgM PE=3
SV=1
Length = 407
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 64 VAEILKNNGLAVEKKIMTSTVDMRDESRGRPVQKAKIEIWLEKTANFDELMAAAA 118
++E++K NG KI+ +D G PV++ K E+ L KT N D+L+ +A
Sbjct: 4 ISELVKKNG----SKILLIVLDGLG---GLPVKEGKTELELAKTPNLDKLVKNSA 51
>sp|Q8TXF9|ALBA1_METKA DNA/RNA-binding protein Alba 1 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=albA1 PE=3
SV=1
Length = 93
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 30 KPLFFYV-NLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLA-VEKKIMTSTVDMR 87
KP+ YV ++ + NEV + A G AI+ V VAEI++N + VE K + +
Sbjct: 13 KPVMNYVLACITQFNEGANEVRIKARGRAISRAVDVAEIVRNRFMPEVEVKDIKIGTEEL 72
Query: 88 DESRGRPVQKAKIEIWLEK 106
+ G V + IEI LEK
Sbjct: 73 ETEEGDTVNVSTIEIVLEK 91
>sp|Q8TWE6|ALBA2_METKA DNA/RNA-binding protein Alba 2 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=albA2 PE=3
SV=1
Length = 93
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 19 KKNRIQVSNTKKPLFFYV-NLAKRYMQQHNEVELSALGMAIATVVTVAEILKNN 71
++N I V N KP+ YV + ++ + +EV+L A G AI+ V VAE ++NN
Sbjct: 3 EENVIYVGN--KPVTNYVLAVMTQFSEGADEVKLVARGRAISRAVDVAEFIRNN 54
>sp|B7JZB1|HIS1_CYAP8 ATP phosphoribosyltransferase OS=Cyanothece sp. (strain PCC 8801)
GN=hisG PE=3 SV=1
Length = 211
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 7 GVNNMNLAVDANK--KNRIQVSNTKKPLFFYVNLAKRYMQQ----------HNEVELSAL 54
G M++AV A+ K+ +++ K +VN AK+Y + VEL +
Sbjct: 91 GYCRMSVAVPASSPYKSPVELPPNGKVASKFVNCAKKYFHTLDLPVEIIPLYGSVELGPI 150
Query: 55 -GM--AIATVVTVAEILKNNGLAVEKKIMTSTVDMRDESRGRPVQKAKIEIWLEK 106
GM AI +V+ LK NGL + ST + + +I W+ K
Sbjct: 151 TGMSEAIVDLVSTGRTLKENGLIEIDTLFESTAHLIAHPLSYRLNLDQINPWVTK 205
>sp|Q57665|ALBA_METJA DNA/RNA-binding protein Alba OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=albA PE=1 SV=1
Length = 87
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 29 KKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNN-GLAVEKKIMTSTVDMR 87
KKP+ YV + ++EV + A G AI V VAE+++N ++ K + D
Sbjct: 9 KKPVMNYVVAVLTQLTSNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDKV 68
Query: 88 DESRGRPVQKAKIEIWLEK 106
GR V + IEI L K
Sbjct: 69 KNPDGREVNVSTIEIVLAK 87
>sp|Q3UU35|OVOS_MOUSE Ovostatin homolog OS=Mus musculus GN=Ovos PE=2 SV=2
Length = 1456
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 17 ANKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEV 49
+N +N I +S+ + FYVN KR + QH++V
Sbjct: 1259 SNPQNTITLSSEESEEVFYVNRNKRLLVQHSKV 1291
>sp|O93256|K1C19_CHICK Keratin, type I cytoskeletal 19 OS=Gallus gallus GN=KRT19 PE=2 SV=1
Length = 423
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 13/67 (19%)
Query: 23 IQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTS 82
+Q+ N K+ L Y+++++E E+SALG +A+ V+V E+ G+ + K +
Sbjct: 216 LQIENLKEELA--------YLKKNHEEEMSALGGQVASQVSV-EVDSAPGIDLSKIL--- 263
Query: 83 TVDMRDE 89
DMRD+
Sbjct: 264 -ADMRDQ 269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,910,108
Number of Sequences: 539616
Number of extensions: 1406429
Number of successful extensions: 3466
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3454
Number of HSP's gapped (non-prelim): 33
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)