BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032957
MAQSLNNSPSCTLYQIRNPRQNSSPPPSSLLLKRSSSSSLRLRSNNYRNKNGVRACFSSP
IDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKAEDSKSD
EEVPEQIEIE

High Scoring Gene Products

Symbol, full name Information P value
AT1G28150 protein from Arabidopsis thaliana 5.9e-25

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032957
        (130 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010514 - symbol:AT1G28150 "AT1G28150" species...   284  5.9e-25   1


>TAIR|locus:2010514 [details] [associations]
            symbol:AT1G28150 "AT1G28150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0010287 "plastoglobule" evidence=IDA]
            EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC069471 GO:GO:0010287
            EMBL:AC021044 EMBL:AY143794 EMBL:AY126998 EMBL:AY085247
            IPI:IPI00525636 PIR:D86407 RefSeq:NP_564301.1 UniGene:At.27970
            STRING:Q9FZ89 PRIDE:Q9FZ89 EnsemblPlants:AT1G28150.1 GeneID:839709
            KEGG:ath:AT1G28150 TAIR:At1g28150 eggNOG:NOG14680
            HOGENOM:HOG000240923 InParanoid:Q9FZ89 OMA:FSAGVKS PhylomeDB:Q9FZ89
            ProtClustDB:CLSN2917085 Genevestigator:Q9FZ89 Uniprot:Q9FZ89
        Length = 123

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query:    55 ACFSSPIDEPILKEALKEPVAFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIKA 114
             +CF+ P  EPIL EALKEP+AF+GGMFAGLLRLDLN++PLKDWVTRTVEA+GITEEE+ A
Sbjct:    48 SCFNLP-QEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDA 106

Query:   115 EDSKS-DEEVPEQIEIE 130
             +   S DE+ P+QIEIE
Sbjct:   107 DGVVSNDEDSPQQIEIE 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.132   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130        95   0.00091  102 3  11 23  0.44    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  526 (56 KB)
  Total size of DFA:  103 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.02u 0.18s 12.20t   Elapsed:  00:00:01
  Total cpu time:  12.02u 0.18s 12.20t   Elapsed:  00:00:01
  Start:  Fri May 10 08:45:18 2013   End:  Fri May 10 08:45:19 2013

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