Query 032957
Match_columns 130
No_of_seqs 46 out of 48
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 12:56:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uq6_A Adenosine kinase, putat 42.7 7.9 0.00027 30.1 1.1 31 75-109 323-353 (372)
2 4gm6_A PFKB family carbohydrat 36.8 21 0.00072 27.0 2.6 35 75-113 294-328 (351)
3 3kd6_A Carbohydrate kinase, PF 36.8 15 0.0005 27.6 1.7 36 75-110 240-276 (313)
4 3dde_A TENA/THI-4 protein, dom 33.7 18 0.00062 26.7 1.7 33 62-100 14-47 (239)
5 3go6_A Ribokinase RBSK; phosph 30.1 24 0.00082 26.7 1.9 36 75-110 249-284 (310)
6 3loo_A Anopheles gambiae adeno 29.1 18 0.00062 27.9 1.1 12 75-86 318-329 (365)
7 3otx_A Adenosine kinase, putat 27.6 20 0.00068 27.2 1.1 29 75-107 302-330 (347)
8 3ktn_A Carbohydrate kinase, PF 24.2 25 0.00086 26.5 1.1 30 75-108 281-310 (346)
9 3ds4_A HIV-1 capsid protein; H 24.1 40 0.0014 22.6 2.0 27 76-103 19-45 (86)
10 3vas_A Putative adenosine kina 22.3 28 0.00097 27.0 1.1 31 75-109 321-351 (370)
11 3kzh_A Probable sugar kinase; 22.3 29 0.00099 26.1 1.1 30 75-108 258-287 (328)
12 1v1a_A 2-keto-3-deoxygluconate 21.7 30 0.001 25.6 1.1 28 75-106 252-279 (309)
13 1vk4_A PFKB carbohydrate kinas 21.6 31 0.001 25.7 1.1 28 75-105 247-274 (298)
14 3ie7_A LIN2199 protein; phosph 21.4 31 0.0011 25.7 1.1 29 75-107 254-282 (320)
15 3bf5_A Ribokinase related prot 21.4 31 0.0011 26.0 1.1 25 75-103 247-271 (306)
16 3pl2_A Sugar kinase, ribokinas 21.2 32 0.0011 25.5 1.1 32 75-110 266-297 (319)
17 3iq0_A Putative ribokinase II; 21.2 32 0.0011 25.9 1.1 32 75-110 261-292 (330)
18 4a1s_C RE60102P, INSC; cell cy 21.1 49 0.0017 20.5 1.7 15 90-104 6-20 (40)
19 2abq_A Fructose 1-phosphate ki 21.0 32 0.0011 25.4 1.1 21 75-99 250-270 (306)
20 2dcn_A Hypothetical fructokina 20.8 32 0.0011 25.4 1.1 32 75-110 257-288 (311)
21 3b1n_A Ribokinase, putative; r 20.7 33 0.0011 26.0 1.1 27 75-105 254-280 (326)
22 3h49_A Ribokinase; transferase 20.5 33 0.0011 25.7 1.1 31 75-109 263-293 (325)
23 2jg1_A Tagatose-6-phosphate ki 20.2 34 0.0012 25.9 1.1 29 75-107 275-303 (330)
No 1
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=42.70 E-value=7.9 Score=30.14 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=20.0
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITE 109 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~ 109 (130)
||+|||++|+++ ..|++.=+.--..++....
T Consensus 323 aF~agfl~~l~~----g~~l~~a~~~a~~aAa~vv 353 (372)
T 3uq6_A 323 AFAAGFIADYIR----GKPMITSLHAAVKAAAYII 353 (372)
T ss_dssp HHHHHHHHHHTT----TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHH
Confidence 899999999975 4566655554443443333
No 2
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=36.82 E-value=21 Score=26.96 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=24.1
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccccccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEEEIK 113 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~~~~~ 113 (130)
||+|||++|+++ ..++++=|+--..++.+.....+
T Consensus 294 aF~ag~l~~l~~----g~~~~~al~~A~aaaal~v~~~G 328 (351)
T 4gm6_A 294 AYTAAVLHGILS----EWRPDETVKFATAAAGLKHSIHG 328 (351)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHhCCCC
Confidence 899999999975 55677767655555555544433
No 3
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=36.75 E-value=15 Score=27.63 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=25.9
Q ss_pred hhhhhhhhhhhc-cCCCCchHHHHHHHhhhhcccccc
Q 032957 75 AFVGGMFAGLLR-LDLNDDPLKDWVTRTVEAAGITEE 110 (130)
Q Consensus 75 AFlGGffSGlLR-LnL~EDPLKsWL~kq~~s~g~t~~ 110 (130)
+|.|||++++++ .++.+++++.=+..-...+.+...
T Consensus 240 af~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~ 276 (313)
T 3kd6_A 240 TFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVE 276 (313)
T ss_dssp HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHe
Confidence 899999999987 456666888777655555544444
No 4
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=33.72 E-value=18 Score=26.70 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=24.3
Q ss_pred ChHHHHHHHhC-cchhhhhhhhhhhccCCCCchHHHHHHH
Q 032957 62 DEPILKEALKE-PVAFVGGMFAGLLRLDLNDDPLKDWVTR 100 (130)
Q Consensus 62 ~tPI~KEl~qq-PVAFlGGffSGlLRLnL~EDPLKsWL~k 100 (130)
..|+|++.+++ | |+-++..| .|..+-++.||.+
T Consensus 14 ~~~~w~~~~~h~p--Fv~~l~~G----tL~~~~f~~yl~Q 47 (239)
T 3dde_A 14 VATMWDSILTNSP--FIHEVLDG----KATKALYAIYMTE 47 (239)
T ss_dssp HHHHHHHHHHHCH--HHHHHHTT----CCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCH--HHHHHHcC----CCCHHHHHHHHHH
Confidence 36899999998 7 67777777 5666777777754
No 5
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=30.10 E-value=24 Score=26.66 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=25.0
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEE 110 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~~ 110 (130)
+|.|||++++++-.++..+++.=+..-...+.+...
T Consensus 249 aF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~ 284 (310)
T 3go6_A 249 VFAGVLAANWPRNPGSPAERLRALRRACAAGALATL 284 (310)
T ss_dssp HHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhC
Confidence 899999999998555566777777655554444333
No 6
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=29.09 E-value=18 Score=27.94 Aligned_cols=12 Identities=67% Similarity=1.124 Sum_probs=11.3
Q ss_pred hhhhhhhhhhhc
Q 032957 75 AFVGGMFAGLLR 86 (130)
Q Consensus 75 AFlGGffSGlLR 86 (130)
||+|||++|+++
T Consensus 318 aF~agfl~~l~~ 329 (365)
T 3loo_A 318 AFVGGFLAQLLQ 329 (365)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC
Confidence 899999999987
No 7
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=27.57 E-value=20 Score=27.16 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=19.0
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGI 107 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~ 107 (130)
||.|||++|+++ ..+++.=+..-..++..
T Consensus 302 aF~ag~l~~l~~----g~~l~~a~~~a~~~aa~ 330 (347)
T 3otx_A 302 AFMGGFLSAYAV----GKDLRRCCETGHYTAQE 330 (347)
T ss_dssp HHHHHHHHHHTT----TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHH
Confidence 899999999986 34555555444333333
No 8
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=24.23 E-value=25 Score=26.48 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=19.9
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGIT 108 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t 108 (130)
+|+|||++|+++ ..+++.=+..-...+.+.
T Consensus 281 aF~ag~~~~l~~----g~~l~~a~~~A~a~aa~~ 310 (346)
T 3ktn_A 281 AYAAGILYGYSQ----NWSLEKAVTFATVNGVLA 310 (346)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Confidence 799999999985 345666665444444333
No 9
>3ds4_A HIV-1 capsid protein; HIV, mutant, polyprotein, complex(viral protein/peptide), mainly alpha; 1.12A {Human immunodeficiency virus 1} PDB: 3dph_A 1a43_A 2xt1_A 2buo_A 3lry_A 2kod_A 3ds1_A 3dtj_A 3ds0_A 3ds5_A 3ds2_A 3ds3_A 2jo0_A 2jyg_A 2xxm_A 2xv6_A 2ont_A 1aum_A 1a8o_A 4arg_B ...
Probab=24.05 E-value=40 Score=22.63 Aligned_cols=27 Identities=26% Similarity=0.610 Sum_probs=20.4
Q ss_pred hhhhhhhhhhccCCCCchHHHHHHHhhh
Q 032957 76 FVGGMFAGLLRLDLNDDPLKDWVTRTVE 103 (130)
Q Consensus 76 FlGGffSGlLRLnL~EDPLKsWL~kq~~ 103 (130)
|.++|+.. +|......-+|.|+++|-.
T Consensus 19 fv~rl~k~-l~~e~~~~~vK~~m~~tL~ 45 (86)
T 3ds4_A 19 YVDRFYKT-LRAEQASQEVKNWMTETLL 45 (86)
T ss_dssp HHHHHHHH-HHHC-CCHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHhccchhHHHHHHHhHH
Confidence 66777764 4778888899999998764
No 10
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=22.34 E-value=28 Score=27.05 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=20.8
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITE 109 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~ 109 (130)
+|.|||++|+++ ..+++.=+..-..++.+..
T Consensus 321 aF~ag~l~~l~~----g~~l~~a~~~A~aaAa~~v 351 (370)
T 3vas_A 321 AFAAGFIADYIR----GKPMITSLHAAVKAAAYII 351 (370)
T ss_dssp HHHHHHHHHHTT----TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHH
Confidence 899999999986 4566666654444444433
No 11
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=22.29 E-value=29 Score=26.10 Aligned_cols=30 Identities=30% Similarity=0.505 Sum_probs=19.8
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGIT 108 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t 108 (130)
+|+|||++|+++ ..+++.=+..-..++.+.
T Consensus 258 af~ag~~~~l~~----g~~~~~a~~~A~a~aa~~ 287 (328)
T 3kzh_A 258 SFVAGLGYGYMN----KMPIEDIVKFAMTMSNIT 287 (328)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Confidence 899999999985 345555555444444443
No 12
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=21.72 E-value=30 Score=25.58 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=18.4
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAG 106 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g 106 (130)
+|.|||++|+++ ..+++.=+..-...+.
T Consensus 252 af~a~~~~~l~~----g~~~~~a~~~a~~~aa 279 (309)
T 1v1a_A 252 AFAAGYLAGAVW----GLPVEERLRLANLLGA 279 (309)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHH
Confidence 799999999985 3455555554443333
No 13
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=21.60 E-value=31 Score=25.67 Aligned_cols=28 Identities=4% Similarity=0.082 Sum_probs=17.7
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAA 105 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~ 105 (130)
+|+|||++++++- ..+++.=+..-...+
T Consensus 247 aF~a~~~~~l~~~---g~~~~~a~~~A~a~a 274 (298)
T 1vk4_A 247 TCTAAFLVGFVFK---KMSIEKATKFAAAVT 274 (298)
T ss_dssp HHHHHHHHHHHTS---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCCHHHHHHHHHHHH
Confidence 8999999999862 234555454433333
No 14
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=21.45 E-value=31 Score=25.67 Aligned_cols=29 Identities=24% Similarity=0.452 Sum_probs=19.9
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGI 107 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~ 107 (130)
+|+|||++|+++ ..+++.=+..-...+.+
T Consensus 254 aF~ag~~~~l~~----g~~~~~a~~~A~a~aa~ 282 (320)
T 3ie7_A 254 VFVGAFIAGLAM----NMPITETLKVATGCSAS 282 (320)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHH
Confidence 899999999986 44566666544444433
No 15
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=21.41 E-value=31 Score=26.00 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=16.8
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhh
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVE 103 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~ 103 (130)
+|+|||++++++ ..+++.=+..-..
T Consensus 247 aF~ag~~~~l~~----g~~~~~a~~~A~~ 271 (306)
T 3bf5_A 247 SFRAGLYLALYN----RRSIEKGMIYGTI 271 (306)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHH
Confidence 699999999985 3455555544333
No 16
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=21.25 E-value=32 Score=25.53 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=21.8
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEE 110 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~~ 110 (130)
+|+|||++|+++ ..+++.=+..-...+.+...
T Consensus 266 af~a~~~~~l~~----g~~~~~a~~~A~~~aa~~v~ 297 (319)
T 3pl2_A 266 AFGGALCHGLLS----EWPLEKVLRFANTAGALVAS 297 (319)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHh
Confidence 899999999985 44666666655554444433
No 17
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=21.17 E-value=32 Score=25.92 Aligned_cols=32 Identities=9% Similarity=-0.024 Sum_probs=21.5
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEE 110 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~~ 110 (130)
+|+|||++|+++ ..+++.=+..-...+.+...
T Consensus 261 af~a~~~~~l~~----g~~~~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 261 CFGGAWIACRQL----GFDAHRALQYANACGALAVT 292 (330)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHc
Confidence 899999999985 44666666655444444433
No 18
>4a1s_C RE60102P, INSC; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=21.07 E-value=49 Score=20.49 Aligned_cols=15 Identities=20% Similarity=0.590 Sum_probs=12.1
Q ss_pred CCchHHHHHHHhhhh
Q 032957 90 NDDPLKDWVTRTVEA 104 (130)
Q Consensus 90 ~EDPLKsWL~kq~~s 104 (130)
...|+.||+.+|.=.
T Consensus 6 q~q~~~sW~seQRW~ 20 (40)
T 4a1s_C 6 HPEPVASWMSEQRWA 20 (40)
T ss_dssp CCCHHHHHHHHHTTC
T ss_pred ccchHHHHHHhcccc
Confidence 467999999988753
No 19
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=21.05 E-value=32 Score=25.42 Aligned_cols=21 Identities=33% Similarity=0.506 Sum_probs=14.6
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHH
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVT 99 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~ 99 (130)
+|+|||++++++ ..+++.=+.
T Consensus 250 aF~a~~~~~l~~----g~~~~~a~~ 270 (306)
T 2abq_A 250 SVVAGFLAALQE----GKSLEDAVP 270 (306)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHH
Confidence 699999999985 334444444
No 20
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=20.81 E-value=32 Score=25.38 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=20.7
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhcccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITEE 110 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~~ 110 (130)
+|.|||++++++ ..+++.=+..-...+.....
T Consensus 257 af~a~~~~~l~~----g~~~~~a~~~a~~~aa~~v~ 288 (311)
T 2dcn_A 257 ALGGTFLSLYYK----GFEMEKALDYAIVASTLNVM 288 (311)
T ss_dssp HHHHHHHHHHTT----TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhc
Confidence 799999999975 44566656544444444333
No 21
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=20.74 E-value=33 Score=26.04 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=17.4
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAA 105 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~ 105 (130)
+|+|||++|+++ ..+++.=+..-...+
T Consensus 254 aF~ag~l~~l~~----g~~~~~a~~~A~~~a 280 (326)
T 3b1n_A 254 AFRGGLLYGIEH----GFDWATAGRLASLMG 280 (326)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHH
Confidence 899999999985 334555454333333
No 22
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=20.52 E-value=33 Score=25.74 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=20.6
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGITE 109 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~t~ 109 (130)
+|+|||++++++ ..+++.=+..-...+.+..
T Consensus 263 af~ag~~~~l~~----g~~~~~a~~~A~~~aa~~v 293 (325)
T 3h49_A 263 NFASGFIAALLE----GKNLRECARFANATAAISV 293 (325)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHH
Confidence 899999999985 4456666655444444433
No 23
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=20.23 E-value=34 Score=25.91 Aligned_cols=29 Identities=14% Similarity=0.263 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhccCCCCchHHHHHHHhhhhccc
Q 032957 75 AFVGGMFAGLLRLDLNDDPLKDWVTRTVEAAGI 107 (130)
Q Consensus 75 AFlGGffSGlLRLnL~EDPLKsWL~kq~~s~g~ 107 (130)
||+|||++|+++ ..+++.=+..-...+.+
T Consensus 275 aF~ag~~~~l~~----g~~l~~al~~A~a~aa~ 303 (330)
T 2jg1_A 275 STVAGITSAILN----HENDHDLLKKANTLGML 303 (330)
T ss_dssp HHHHHHHHHHHT----TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCHHHHHHHHHHHHHH
Confidence 699999999985 34555555544443433
Done!