Query 032960
Match_columns 130
No_of_seqs 108 out of 625
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 13:00:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032960.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032960hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2imja1 d.17.4.23 (A:5-159) Hy 52.6 2.7 0.0002 27.6 1.5 17 73-89 12-28 (155)
2 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 22.2 83 0.0061 20.0 5.2 46 46-91 84-131 (164)
3 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 19.1 68 0.005 20.2 4.1 40 47-86 67-107 (146)
4 d2o35a1 a.293.1.1 (A:2-80) Hyp 18.0 28 0.0021 20.0 1.7 18 72-89 15-32 (79)
5 d1pq1a_ f.1.4.1 (A:) Apoptosis 16.8 1.2E+02 0.0088 19.8 5.1 46 46-91 120-167 (196)
6 d2jm6b1 f.1.4.1 (B:147-308) EA 14.4 1.3E+02 0.0092 18.8 4.6 45 46-90 78-125 (162)
7 d1vpua_ g.34.1.1 (A:) HIV-1 VP 13.2 56 0.004 16.6 1.9 16 73-88 3-19 (45)
8 d1kqfb2 f.23.22.1 (B:246-290) 12.2 98 0.0072 15.6 2.7 26 102-128 7-33 (45)
9 d1hvwa_ g.3.6.2 (A:) Atracotox 11.9 24 0.0017 15.6 0.1 8 6-13 3-10 (26)
10 d1zy3a1 f.1.4.1 (A:1-170) Apop 11.6 1.4E+02 0.01 18.9 4.2 39 46-84 75-113 (170)
No 1
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=52.62 E-value=2.7 Score=27.64 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=15.3
Q ss_pred HHHHHHHHHhhhhhHHH
Q 032960 73 TRCGIQRYRKQNDWVNA 89 (130)
Q Consensus 73 ~ec~~~~~R~k~D~~Ns 89 (130)
.|.+.+|+|-.+|.||+
T Consensus 12 ~etA~~KVr~AEdaWNs 28 (155)
T d2imja1 12 RESAIEKIRLAEDGWNS 28 (155)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 37889999999999997
No 2
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.19 E-value=83 Score=19.98 Aligned_cols=46 Identities=13% Similarity=0.122 Sum_probs=34.0
Q ss_pred hhhHHHHHHHhccchhhhHHHHHHhhhHHHHHHHHHhh--hhhHHHHH
Q 032960 46 ITRASFVAKSIGKYGFQCGLVAGVFSSTRCGIQRYRKQ--NDWVNALI 91 (130)
Q Consensus 46 ~~~~~~~~~~~~~~~~~fa~~g~~fs~~ec~~~~~R~k--~D~~Ns~~ 91 (130)
.+.+..+.+.+-+.+.||+-+-++|++.-....+...+ +|..+.++
T Consensus 84 ~~~f~~Va~elF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~i~ 131 (164)
T d1g5ma_ 84 RGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIA 131 (164)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 34566777777788899999999999988887777665 44455443
No 3
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=19.06 E-value=68 Score=20.20 Aligned_cols=40 Identities=8% Similarity=0.084 Sum_probs=30.3
Q ss_pred hhHHHHHHHhccchh-hhHHHHHHhhhHHHHHHHHHhhhhh
Q 032960 47 TRASFVAKSIGKYGF-QCGLVAGVFSSTRCGIQRYRKQNDW 86 (130)
Q Consensus 47 ~~~~~~~~~~~~~~~-~fa~~g~~fs~~ec~~~~~R~k~D~ 86 (130)
+.+.++.+++-+.+. |||=+-++|++.-...+++.++.+.
T Consensus 67 ~~f~~V~~elF~DG~~NWGRIVaLfaFg~~la~~~~~~~~~ 107 (146)
T d1k3ka_ 67 DQLGLSMLQVSGDGNMNWGRALAILTFGSFVAQKLSNEPHL 107 (146)
T ss_dssp HHHHTHHHHHCSSCSCCHHHHHHHHHHHHHHHHHTTTCTHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 345666777777886 9999999999988888887765443
No 4
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=17.96 E-value=28 Score=20.01 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.0
Q ss_pred hHHHHHHHHHhhhhhHHH
Q 032960 72 STRCGIQRYRKQNDWVNA 89 (130)
Q Consensus 72 ~~ec~~~~~R~k~D~~Ns 89 (130)
.++-.++++|.+.|..|=
T Consensus 15 aFrrL~~HL~~r~dVQNI 32 (79)
T d2o35a1 15 VFRRLLEHLRERSDVQNI 32 (79)
T ss_dssp HHHHHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHhCccchhh
Confidence 457789999999999884
No 5
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.83 E-value=1.2e+02 Score=19.82 Aligned_cols=46 Identities=13% Similarity=0.077 Sum_probs=33.0
Q ss_pred hhhHHHHHHHhccchhhhHHHHHHhhhHHHHHHHHHhhh--hhHHHHH
Q 032960 46 ITRASFVAKSIGKYGFQCGLVAGVFSSTRCGIQRYRKQN--DWVNALI 91 (130)
Q Consensus 46 ~~~~~~~~~~~~~~~~~fa~~g~~fs~~ec~~~~~R~k~--D~~Ns~~ 91 (130)
...+..+.+++-+.+.+|+-+-++|++.-....+...++ |..+.++
T Consensus 120 ~~~F~~V~~elF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~I~ 167 (196)
T d1pq1a_ 120 YQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIA 167 (196)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 345677777777788899999999988887777776653 4555443
No 6
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.43 E-value=1.3e+02 Score=18.80 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=32.0
Q ss_pred hhhHHHHHHHhccchh-hhHHHHHHhhhHHHHHHHHHhh--hhhHHHH
Q 032960 46 ITRASFVAKSIGKYGF-QCGLVAGVFSSTRCGIQRYRKQ--NDWVNAL 90 (130)
Q Consensus 46 ~~~~~~~~~~~~~~~~-~fa~~g~~fs~~ec~~~~~R~k--~D~~Ns~ 90 (130)
.+.+..+.+++-+.+. ||+-+-++|++.-....+...+ +|..+.+
T Consensus 78 ~~~f~~Va~elf~dG~~NWGRIval~~F~~~la~~~~~~~~~~~v~~i 125 (162)
T d2jm6b1 78 VKSFSRVMVHVFKDGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPL 125 (162)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHcCChhHHHHH
Confidence 3456777777777775 8999999999888877777554 3444443
No 7
>d1vpua_ g.34.1.1 (A:) HIV-1 VPU cytoplasmic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=13.24 E-value=56 Score=16.64 Aligned_cols=16 Identities=25% Similarity=0.142 Sum_probs=11.5
Q ss_pred HHHHHHHHHhh-hhhHH
Q 032960 73 TRCGIQRYRKQ-NDWVN 88 (130)
Q Consensus 73 ~ec~~~~~R~k-~D~~N 88 (130)
++..++++|.+ +|.-|
T Consensus 3 IdrLi~RIrERAEDSGN 19 (45)
T d1vpua_ 3 IDRLIDRITERAEDSGN 19 (45)
T ss_dssp HHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHcccCCC
Confidence 46778888885 66655
No 8
>d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
Probab=12.19 E-value=98 Score=15.63 Aligned_cols=26 Identities=4% Similarity=-0.330 Sum_probs=13.0
Q ss_pred cCcc-hhHHHHHHHHHHHHHHHHHHHhh
Q 032960 102 AGTR-RWTQVIGVAGIVSAFSAAADYSR 128 (130)
Q Consensus 102 ~~~g-~~~~~~g~a~~~aa~s~a~d~~~ 128 (130)
+++| .+|...-..++ ++.+..++|..
T Consensus 7 lWKgv~Kpl~~~~~~~-~~~~~~fHYv~ 33 (45)
T d1kqfb2 7 LWKGALKPLAAAGFIA-TFAGLIFHYIG 33 (45)
T ss_dssp HHHTTHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHH-HHHHHHHhhhe
Confidence 3444 45544333333 55666666654
No 9
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=11.87 E-value=24 Score=15.59 Aligned_cols=8 Identities=25% Similarity=0.605 Sum_probs=4.4
Q ss_pred ccCCCchH
Q 032960 6 IDAVPCSS 13 (130)
Q Consensus 6 ~~~~~C~~ 13 (130)
+.+.|||+
T Consensus 3 psgqpcpy 10 (26)
T d1hvwa_ 3 PSGQPCPY 10 (26)
T ss_dssp CTTSBCSS
T ss_pred CCCCcCCC
Confidence 45566654
No 10
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.59 E-value=1.4e+02 Score=18.85 Aligned_cols=39 Identities=13% Similarity=0.046 Sum_probs=31.0
Q ss_pred hhhHHHHHHHhccchhhhHHHHHHhhhHHHHHHHHHhhh
Q 032960 46 ITRASFVAKSIGKYGFQCGLVAGVFSSTRCGIQRYRKQN 84 (130)
Q Consensus 46 ~~~~~~~~~~~~~~~~~fa~~g~~fs~~ec~~~~~R~k~ 84 (130)
.+.+..+.+++-+.+.||+-+-++|++.-....+...++
T Consensus 75 ~~~f~~Va~elF~dginWGRIVal~~F~g~la~~~~~~~ 113 (170)
T d1zy3a1 75 QQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKE 113 (170)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 455677777777778899999999999888888877653
Done!