Query 032962
Match_columns 130
No_of_seqs 101 out of 162
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 13:02:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vm0_A Unknown protein; struct 100.0 3.4E-43 1.2E-47 262.5 11.7 127 2-130 2-130 (130)
2 1nfj_A ALBA, conserved hypothe 99.9 1.4E-24 4.9E-29 152.2 10.7 85 21-108 2-89 (89)
3 2bky_A DNA/RNA-binding protein 99.9 2.4E-24 8.3E-29 153.3 11.2 88 19-109 6-97 (97)
4 1nh9_A MJA10B, DNA-binding pro 99.9 2.8E-24 9.5E-29 150.2 10.1 84 22-108 2-87 (87)
5 3toe_A MTH10B, DNA/RNA-binding 99.9 1E-23 3.4E-28 149.1 10.3 85 21-108 3-90 (91)
6 2h9u_A DNA/RNA-binding protein 99.9 1.4E-23 4.9E-28 150.6 10.9 88 22-111 6-100 (102)
7 2bky_X DNA/RNA-binding protein 99.9 4.6E-22 1.6E-26 139.8 8.9 83 19-109 3-88 (89)
8 3iab_B Ribonucleases P/MRP pro 98.4 1E-06 3.5E-11 66.3 8.2 68 21-90 29-101 (140)
9 2ek0_A Stage V sporulation pro 79.2 3.9 0.00013 28.3 5.1 48 23-72 2-51 (90)
10 3iab_A Ribonucleases P/MRP pro 75.1 14 0.00048 28.0 7.6 67 47-113 75-149 (158)
11 3ju3_A Probable 2-oxoacid ferr 37.9 60 0.002 22.0 4.9 38 48-85 13-51 (118)
12 2vo1_A CTP synthase 1; pyrimid 34.9 26 0.00089 28.9 3.0 32 52-84 32-64 (295)
13 1umd_B E1-beta, 2-OXO acid deh 32.3 58 0.002 25.6 4.6 39 46-84 200-239 (324)
14 1w85_B Pyruvate dehydrogenase 26.7 72 0.0025 25.1 4.3 40 45-84 198-238 (324)
15 3nva_A CTP synthase; rossman f 26.6 33 0.0011 30.3 2.4 33 52-85 12-45 (535)
16 2c5m_A CTP synthase; cytidine 25.8 30 0.001 28.5 1.9 33 52-85 32-65 (294)
17 2e6k_A Transketolase; structur 25.3 73 0.0025 27.9 4.4 35 49-83 542-577 (651)
18 3l84_A Transketolase; TKT, str 24.8 75 0.0026 28.0 4.4 36 48-83 525-561 (632)
19 2r8o_A Transketolase 1, TK 1; 23.0 73 0.0025 28.0 4.0 35 49-83 550-585 (669)
20 3rim_A Transketolase, TK; TPP, 22.3 93 0.0032 27.9 4.5 34 50-83 586-620 (700)
21 3m49_A Transketolase; alpha-be 22.2 90 0.0031 27.9 4.4 34 50-83 578-612 (690)
22 1itz_A Transketolase; calvin c 22.2 91 0.0031 27.5 4.4 35 49-83 563-598 (675)
23 1gpu_A Transketolase; transfer 21.8 86 0.003 27.6 4.2 35 49-83 555-590 (680)
24 3mos_A Transketolase, TK; thia 21.6 93 0.0032 27.1 4.3 36 50-85 500-536 (616)
25 1z7m_E ATP phosphoribosyltrans 20.7 28 0.00096 26.9 0.7 53 35-87 115-180 (208)
26 2bfd_B 2-oxoisovalerate dehydr 20.5 99 0.0034 24.6 4.0 40 45-84 216-257 (342)
27 2ozl_B PDHE1-B, pyruvate dehyd 20.0 1.2E+02 0.004 24.3 4.3 40 45-84 213-253 (341)
No 1
>1vm0_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2 unknown function, nitrate; 1.80A {Arabidopsis thaliana} SCOP: d.68.6.2 PDB: 2q3v_A
Probab=100.00 E-value=3.4e-43 Score=262.51 Aligned_cols=127 Identities=76% Similarity=1.004 Sum_probs=91.6
Q ss_pred hhhhhhccccccccccccCCccEEEEecCCCCcchhHHHHHHHhccCCEEEEeeccchHHHHHHHHHHHHhCCceeEEEE
Q 032962 2 EVITEGVNNINISDASAASKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGLAVEKKI 81 (130)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~n~I~Vs~~kkP~~~Yv~lAk~~L~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~a~ikkI 81 (130)
|+|++||+|+++.+ ..+++|+|+||++|||.||||++|++||+++++|+|||||+||++||++||+|||||++++++|
T Consensus 2 ~~~~~~~~~~~~~~--~~~~~N~I~Vs~~kkP~~nYV~~a~~~l~g~~eV~LkA~G~AIskAV~VAEiLkrr~l~~ikkI 79 (130)
T 1vm0_A 2 EEITDGVNNMNLAT--DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKI 79 (130)
T ss_dssp -------------------CTTEEECCCTTSCHHHHHHHHHHHHHHHSEEEEEEEGGGHHHHHHHHHHHHHTTSEEEEEE
T ss_pred hhHhhhhhcccccC--CCCCCCEEEEecCCCCceeHHHHHHHHHcCCCEEEEEechHHHHHHHHHHHHHHhcCcceEEEE
Confidence 78999999998863 4688999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeEeccCCCCccceeeeEEEEEeeCcchHHHHHHHHHhhh--cccccC
Q 032962 82 TTSTVDIREETGGRPVQKAKIEILLGKSEKFDELMAAAEEEAI--NNEEQS 130 (130)
Q Consensus 82 ~T~t~~i~~e~~g~~~~v~kIeI~L~K~~~Fd~~~~~~~~~~~--~~~~~~ 130 (130)
.|+|++++++.+||++++|||||+|+|+|+||++|++++++++ +++||+
T Consensus 80 ~t~t~~i~~~~~~r~v~~skIEI~L~k~~~fd~~~~~~~~~~~~~~~~~~~ 130 (130)
T 1vm0_A 80 MTSIVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAETQVQN 130 (130)
T ss_dssp EEEEEEEC------CEEEEEEEEEEEECTTHHHHHHHC-------------
T ss_pred EeeeEEeccCCCCcccccceEEEEEEecCcHHHHHHHhhhhhcccccccCC
Confidence 9999999987678989999999999999999999999999994 677764
No 2
>1nfj_A ALBA, conserved hypothetical protein AF1956; SIR2, HDAC, gene regulation, transcription; 2.00A {Archaeoglobus fulgidus} SCOP: d.68.6.1 PDB: 1nfh_A 2z7c_A*
Probab=99.92 E-value=1.4e-24 Score=152.21 Aligned_cols=85 Identities=32% Similarity=0.447 Sum_probs=76.4
Q ss_pred CccEEEEecCCCCcchhHHHHHHHh-ccCCEEEEeeccchHHHHHHHHHHHHhCCc--eeEEEEEeeeeEeccCCCCccc
Q 032962 21 KKNRIQVSNTKKPLFFYVNLAKRYM-QQHNEVELSALGMAIATVVTIAEILKNNGL--AVEKKITTSTVDIREETGGRPV 97 (130)
Q Consensus 21 ~~n~I~Vs~~kkP~~~Yv~lAk~~L-~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~--a~ikkI~T~t~~i~~e~~g~~~ 97 (130)
.+|.|+|+ +||.|+||.+|..+| +|+++|.|||+|+||++||++||+||+|++ ..+++|+++|+++.++ .|+.+
T Consensus 2 ~~n~I~V~--~k~v~~yV~~~~~~l~~g~~eV~ika~G~AIskAV~vaeilk~r~~~gl~i~~i~i~s~~i~~e-~g~~r 78 (89)
T 1nfj_A 2 AEHVVYVG--NKPVMNYVLATLTQLNEGADEVVIKARGRAISRAVDVAEIVRNRFMPGVKVKEIKIDTEELESE-QGRRS 78 (89)
T ss_dssp -CEEEECC--SSCHHHHHHHHHHHHHTTCSEEEEEEETTHHHHHHHHHHHHHHHTCTTCEEEEEEEEEEECCCB-TTBCC
T ss_pred CCCEEEEc--CCCHHHHHHHHHHHHhCCCCEEEEEEecHHHHHHHHHHHHHHHhccCCcEEEEEEEeEEEEEcC-CCcEE
Confidence 47999999 789999998888666 579999999999999999999999999986 5779999999999885 48888
Q ss_pred eeeeEEEEEee
Q 032962 98 QKAKIEILLGK 108 (130)
Q Consensus 98 ~v~kIeI~L~K 108 (130)
++|.|+|+|.|
T Consensus 79 ~vs~IeI~L~k 89 (89)
T 1nfj_A 79 NVSTIEIVLAK 89 (89)
T ss_dssp EEEEEEEEEEC
T ss_pred EeeEEEEEEEC
Confidence 99999999986
No 3
>2bky_A DNA/RNA-binding protein ALBA 1; archaeal DNA binding protein, DNA condensation, DNA-binding, DNA binding protein; 1.70A {Sulfolobus solfataricus} SCOP: d.68.6.1 PDB: 1h0x_A* 1h0y_A* 1y9x_A
Probab=99.91 E-value=2.4e-24 Score=153.29 Aligned_cols=88 Identities=30% Similarity=0.396 Sum_probs=77.2
Q ss_pred cCCccEEEEecCCCCcchhHHHHHHHh-ccCCEEEEeeccchHHHHHHHHHHHHhCCce---eEEEEEeeeeEeccCCCC
Q 032962 19 ASKKNRIQVSNTKKPLFFYVNLAKRYM-QQHNEVELSALGMAIATVVTIAEILKNNGLA---VEKKITTSTVDIREETGG 94 (130)
Q Consensus 19 ~~~~n~I~Vs~~kkP~~~Yv~lAk~~L-~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~a---~ikkI~T~t~~i~~e~~g 94 (130)
-+++|.|+|+ +||.|+||.+|..+| +|+++|+|||+|+||++||++||+||+|++. .+++|+++|+++.++ +|
T Consensus 6 ~~~~n~I~V~--~k~v~~YV~~a~~ll~~g~~eV~ikA~G~AIskAV~vaeilk~r~~~~~l~~~~i~i~s~~i~~e-~G 82 (97)
T 2bky_A 6 PTPSNVVLIG--KKPVMNYVLAALTLLNQGVSEIVIKARGRAISKAVDTVEIVRNRFLPDKIEIKEIRVGSQVVTSQ-DG 82 (97)
T ss_dssp ---CCEEECC--SSCHHHHHHHHHHHHHTTCCEEEEEEETTHHHHHHHHHHHHHHHTSTTTEEEEEEEEEEEEEEET-TS
T ss_pred CCCCCEEEEc--CcCHHHHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHhccCCceEEEEEEeeeEEEecC-CC
Confidence 3578999999 889999998888666 5799999999999999999999999999874 489999999999885 48
Q ss_pred ccceeeeEEEEEeeC
Q 032962 95 RPVQKAKIEILLGKS 109 (130)
Q Consensus 95 ~~~~v~kIeI~L~K~ 109 (130)
+.+++|.|+|+|.|.
T Consensus 83 ~~r~vS~IeI~L~k~ 97 (97)
T 2bky_A 83 RQSRVSTIEIAIRKK 97 (97)
T ss_dssp CEEEEEEEEEEEEEC
T ss_pred cEEEeeEEEEEEEcC
Confidence 888999999999874
No 4
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=99.91 E-value=2.8e-24 Score=150.20 Aligned_cols=84 Identities=33% Similarity=0.476 Sum_probs=69.6
Q ss_pred ccEEEEecCCCCcchhHHHHHHHhccCCEEEEeeccchHHHHHHHHHHHHhCCc--eeEEEEEeeeeEeccCCCCcccee
Q 032962 22 KNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTIAEILKNNGL--AVEKKITTSTVDIREETGGRPVQK 99 (130)
Q Consensus 22 ~n~I~Vs~~kkP~~~Yv~lAk~~L~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~--a~ikkI~T~t~~i~~e~~g~~~~v 99 (130)
+|.|+|+ +||.|+||..|..+|+..++|.|||+|+||++||++||+||+|++ ..+++|+++|+.+.++ +|+.+++
T Consensus 2 ~n~I~V~--~k~v~~YV~~~~~~l~~g~eV~ikA~G~AIskAV~vaeilk~r~~~~l~v~~i~i~s~~i~~e-~g~~r~v 78 (87)
T 1nh9_A 2 DNVVLIG--KKPVMNYVVAVLTQLTSNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDKVKNP-DGREVNV 78 (87)
T ss_dssp CSEEEEC--SSCHHHHHHHHHHHHHHCSEEEEEEEGGGHHHHHHHHHHHHHHTCTTCEEEEEEEEEEC--------CCCE
T ss_pred CCEEEEe--CcchHHHHHHHHHHhcCCCEEEEEEechHHHHHHHHHHHHHHhccCCeEEEEEEEeEEEEEcC-CCcEEEe
Confidence 6899999 669999998888666533999999999999999999999999986 5779999999998885 4888899
Q ss_pred eeEEEEEee
Q 032962 100 AKIEILLGK 108 (130)
Q Consensus 100 ~kIeI~L~K 108 (130)
|.|+|+|.|
T Consensus 79 S~IeI~L~k 87 (87)
T 1nh9_A 79 STIEIVLAK 87 (87)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999986
No 5
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.90 E-value=1e-23 Score=149.11 Aligned_cols=85 Identities=32% Similarity=0.403 Sum_probs=75.9
Q ss_pred CccEEEEecCCCCcchhHHHHHHHh-ccCCEEEEeeccchHHHHHHHHHHHHhCCc--eeEEEEEeeeeEeccCCCCccc
Q 032962 21 KKNRIQVSNTKKPLFFYVNLAKRYM-QQHNEVELSALGMAIATVVTIAEILKNNGL--AVEKKITTSTVDIREETGGRPV 97 (130)
Q Consensus 21 ~~n~I~Vs~~kkP~~~Yv~lAk~~L-~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~--a~ikkI~T~t~~i~~e~~g~~~ 97 (130)
++|.|+|+ +||.|+||..+..+| +|.++|.|+|+|+||++||++||+||+|++ ..+++|+++|+++.++ +|+.+
T Consensus 3 ~~~vv~vg--~Kpv~~YV~~~i~~~n~g~~eV~ikA~G~aIskAVdvaei~k~R~~~~v~v~~I~I~se~~~~e-~G~~r 79 (91)
T 3toe_A 3 EENVVYIG--NKPVMNYVLAVVTQMNGGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENIDICTEEIIGN-EGTAT 79 (91)
T ss_dssp --CCEECC--SSCHHHHHHHHHHHHHTTCCEEEEEEETTHHHHHHHHHHHHHHHTCTTCEEEEEEEEEEEEECT-TSSEE
T ss_pred ccCEEEEC--CCcHHHHHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHhccCCcEEEEEEeeeEEeecC-CCcee
Confidence 47899999 999999996666555 689999999999999999999999999988 8999999999998874 58888
Q ss_pred eeeeEEEEEee
Q 032962 98 QKAKIEILLGK 108 (130)
Q Consensus 98 ~v~kIeI~L~K 108 (130)
++|.|||+|.|
T Consensus 80 ~VS~IeI~L~k 90 (91)
T 3toe_A 80 NVSAIEIQLRK 90 (91)
T ss_dssp EEEEEEEEEEC
T ss_pred EeeEEEEEEEC
Confidence 99999999987
No 6
>2h9u_A DNA/RNA-binding protein ALBA 2; archaea, DNA binding protein, structural G NPPSFA, national project on protein structural and function analyses; 2.00A {Aeropyrum pernix} PDB: 3u6y_A*
Probab=99.90 E-value=1.4e-23 Score=150.57 Aligned_cols=88 Identities=26% Similarity=0.352 Sum_probs=78.9
Q ss_pred ccEEEEecCCCCcchhHHHHH-HHhc-cCCEEEEeeccchHHHHHHHHHHHHhCCc--eeEEEEEeeeeEeccCC-CCc-
Q 032962 22 KNRIQVSNTKKPLFFYVNLAK-RYMQ-QHNEVELSALGMAIATVVTIAEILKNNGL--AVEKKITTSTVDIREET-GGR- 95 (130)
Q Consensus 22 ~n~I~Vs~~kkP~~~Yv~lAk-~~L~-g~~eV~LsAlG~AIs~AV~vAEiLkrr~~--a~ikkI~T~t~~i~~e~-~g~- 95 (130)
+|.|+|+ +||.|+|+.+|. .+|+ |+++|.|||+|+||++||++||+||||++ ..+++|+++|..+.++. +|+
T Consensus 6 ~n~I~V~--~k~~~nyV~~a~~~ll~~g~~eV~ikA~G~AIskAV~vaEilk~r~~~gl~~q~i~i~s~~i~d~~e~g~~ 83 (102)
T 2h9u_A 6 APEVRIG--RKPVMNYVLAILTTLMEQGTNQVVVKARGRNINRAVDAVEIVRKRFAKNIEIKDIKIDSQEIEVQTPEGQT 83 (102)
T ss_dssp CCEEECC--SSCHHHHHHHHHHHHTSTTCCEEEEEEETTHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEEEEECTTSCE
T ss_pred CCEEEEc--CCCHHHHHHHHHHHHHhCCCCEEEEEEechhhhHHHHHHHHHHHhccCCceEEEEEEeeEEEeccccCCcc
Confidence 6999999 889999999998 7775 79999999999999999999999999997 56699999999988751 466
Q ss_pred -cceeeeEEEEEeeCcc
Q 032962 96 -PVQKAKIEILLGKSEK 111 (130)
Q Consensus 96 -~~~v~kIeI~L~K~~~ 111 (130)
.+++|.|+|+|.|.|+
T Consensus 84 ~~r~vS~IeI~Lsk~~~ 100 (102)
T 2h9u_A 84 RTRRVSSIEICLEKAGE 100 (102)
T ss_dssp EEEEEEEEEEEEEECSS
T ss_pred ceeEeeeEEEEEEccCC
Confidence 7899999999999885
No 7
>2bky_X DNA/RNA-binding protein ALBA 2; archaeal DNA binding protein, DNA condensation, DNA-binding, DNA binding protein; 1.70A {Sulfolobus solfataricus} SCOP: d.68.6.1 PDB: 2a2y_A 1udv_A
Probab=99.87 E-value=4.6e-22 Score=139.77 Aligned_cols=83 Identities=17% Similarity=0.033 Sum_probs=72.2
Q ss_pred cCCccEEEEecCCCCcchhHHHHH-HHhccCCEEEEeeccchHHHHHHHHHHHHhCCc--eeEEEEEeeeeEeccCCCCc
Q 032962 19 ASKKNRIQVSNTKKPLFFYVNLAK-RYMQQHNEVELSALGMAIATVVTIAEILKNNGL--AVEKKITTSTVDIREETGGR 95 (130)
Q Consensus 19 ~~~~n~I~Vs~~kkP~~~Yv~lAk-~~L~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~--a~ikkI~T~t~~i~~e~~g~ 95 (130)
+.++|.++|+ +||.|+||..+. +|.+|.++|.|||+|+||++||++||+||+|++ +.+++|+++|+. |+
T Consensus 3 ~~~~~iv~vg--~kpv~nYV~~~~~~ln~g~~eV~ikA~G~aIskAVdvaeilk~R~~~~~~i~~i~i~se~------~~ 74 (89)
T 2bky_X 3 EKLNEIVVRK--TKNVEDHVLDVIVLFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVNVQTGSEV------RD 74 (89)
T ss_dssp -CCEEEECCT--TSCHHHHHHHHHHHHHTTCCEEEEEEETTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEEE------ET
T ss_pred CCCCCEEEEC--CCCHHHHHHHHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHhccCceEEEEEEecccc------Cc
Confidence 3788999999 789999996666 455689999999999999999999999999977 799999999885 34
Q ss_pred cceeeeEEEEEeeC
Q 032962 96 PVQKAKIEILLGKS 109 (130)
Q Consensus 96 ~~~v~kIeI~L~K~ 109 (130)
.+++|.|+|+|.|.
T Consensus 75 ~r~VS~IeI~L~k~ 88 (89)
T 2bky_X 75 RRRISYILLRLKRV 88 (89)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred ceEeeeEEEEEEec
Confidence 45899999999874
No 8
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=98.41 E-value=1e-06 Score=66.27 Aligned_cols=68 Identities=12% Similarity=0.253 Sum_probs=52.4
Q ss_pred CccEEEEecCCCCcchhHHHHHHHhc-----cCCEEEEeeccchHHHHHHHHHHHHhCCceeEEEEEeeeeEecc
Q 032962 21 KKNRIQVSNTKKPLFFYVNLAKRYMQ-----QHNEVELSALGMAIATVVTIAEILKNNGLAVEKKITTSTVDIRE 90 (130)
Q Consensus 21 ~~n~I~Vs~~kkP~~~Yv~lAk~~L~-----g~~eV~LsAlG~AIs~AV~vAEiLkrr~~a~ikkI~T~t~~i~~ 90 (130)
-+|.|+|+ ++-|.+.=+.=..+||. +..+|.|+|||+||.+|+.+|-.+++++- ..-.|.|+|+.+-|
T Consensus 29 ~~~~iYV~-skTpf~S~vkRi~KlL~~~~k~~~~eV~v~GmGkAIeKal~lAl~fq~~~~-~~V~V~T~TV~vvD 101 (140)
T 3iab_B 29 IHTTIFVK-STTPYVSALKRINKFLDSVHKQGSSYVAVLGMGKAVEKTLALGCHFQDQKN-KKIEVYTKTIEVLD 101 (140)
T ss_dssp HTTEEECC-SSCCHHHHHHHHHHHHHHHHHHTCSEEEEEEEGGGHHHHHHHHHHHHHTTC-CCEEEEEEEEEEEE
T ss_pred cCceEEEe-cCCchHHHHHHHHHHHHHhhcCCCcEEEEEechHHHHHHHHHHHHHhhcCC-EEEEEEeceEEEEE
Confidence 47899999 44475544433337886 58999999999999999999999999863 44568888876554
No 9
>2ek0_A Stage V sporulation protein S (spovs) related Pro; structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus} PDB: 2eh1_A
Probab=79.15 E-value=3.9 Score=28.34 Aligned_cols=48 Identities=25% Similarity=0.353 Sum_probs=35.8
Q ss_pred cEEEEecCCCCcchhHHHHH-HHhccCCEEEEeeccc-hHHHHHHHHHHHHh
Q 032962 23 NRIQVSNTKKPLFFYVNLAK-RYMQQHNEVELSALGM-AIATVVTIAEILKN 72 (130)
Q Consensus 23 n~I~Vs~~kkP~~~Yv~lAk-~~L~g~~eV~LsAlG~-AIs~AV~vAEiLkr 72 (130)
..+.||+..+|. ... =|. ..++..+.|+|.|.|. |++.||...-|-|.
T Consensus 2 e~LKVSs~S~P~-~VA-GAIA~~lRe~~~veiqAIGa~AvNqAVKAIAIARg 51 (90)
T 2ek0_A 2 ETLRVSSKSRPN-SVA-GAIAAMLRTKGEVEVQAIGPQAVNQAVKAIAIARG 51 (90)
T ss_dssp CEEEECTTCCHH-HHH-HHHHHHHHHHSEEEEEECSHHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCChH-HHH-HHHHHHHhcCCceEEEEECHHHHHHHHHHHHHHHH
Confidence 468899888886 333 222 5777788999999998 99999887666543
No 10
>3iab_A Ribonucleases P/MRP protein subunit POP6; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=75.15 E-value=14 Score=27.95 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=43.5
Q ss_pred cCCEEEEeeccchHHHHHHHHHHHHhC------CceeEEEEEeeeeEec--cCCCCccceeeeEEEEEeeCcchH
Q 032962 47 QHNEVELSALGMAIATVVTIAEILKNN------GLAVEKKITTSTVDIR--EETGGRPVQKAKIEILLGKSEKFD 113 (130)
Q Consensus 47 g~~eV~LsAlG~AIs~AV~vAEiLkrr------~~a~ikkI~T~t~~i~--~e~~g~~~~v~kIeI~L~K~~~Fd 113 (130)
+.+-|-|-|.|..|.+++.+.||+|++ ++.+.-+..-....-. .|---+..++|=+.+++.++.++|
T Consensus 75 ~~~~V~l~syg~hIQKmLSIvEI~Kk~~~~~~~~l~Q~NkL~~f~~v~~grNELle~r~~vPILi~~i~~~~~~~ 149 (158)
T 3iab_A 75 LQQVVCIFSYGPHIQKMLSILEIFKKGYIKNNKKIYQWNKLTSFDIKREGRNELQEERLKVPILVTMVSDSEIID 149 (158)
T ss_dssp CEEEEEEEEEGGGHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEEEEC-------CCCCEEEEEEEEEEESSSSCC
T ss_pred cCceEEEEecChHHHHHHHHHHHHHHHhhcCCccHHHHhhhhhhccCCccccHHHHhhcCCCEEEEEEecccccc
Confidence 445599999999999999999999984 2555444443322111 111123457888888888876554
No 11
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=37.87 E-value=60 Score=22.04 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEeee
Q 032962 48 HNEVELSALGMAIATVVTIAEILKNNGL-AVEKKITTST 85 (130)
Q Consensus 48 ~~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~t 85 (130)
..++.|=+.|.....|..+++.|+.+|+ +.+-++++-.
T Consensus 13 g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~ 51 (118)
T 3ju3_A 13 EADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFS 51 (118)
T ss_dssp SCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSC
T ss_pred CCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEe
Confidence 4568899999999999999999999987 6666666643
No 12
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=34.87 E-value=26 Score=28.90 Aligned_cols=32 Identities=31% Similarity=0.463 Sum_probs=26.2
Q ss_pred EEeeccchHHHHHHHHHHHHhCCc-eeEEEEEee
Q 032962 52 ELSALGMAIATVVTIAEILKNNGL-AVEKKITTS 84 (130)
Q Consensus 52 ~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~ 84 (130)
++|+||+-|..| .++-+||.||+ +++.|++-.
T Consensus 32 VvS~lGKGi~aa-Slg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 32 VISGIGKGIIAS-SVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp SSSSSSHHHHHH-HHHHHHHHTTCCEEEEEEECS
T ss_pred cccccccHHHHH-HHHHHHHHCCCcceeeecccc
Confidence 357799999765 68999999999 888888753
No 13
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=32.26 E-value=58 Score=25.64 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=32.0
Q ss_pred ccCCEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEee
Q 032962 46 QQHNEVELSALGMAIATVVTIAEILKNNGL-AVEKKITTS 84 (130)
Q Consensus 46 ~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~ 84 (130)
....+|.|=|.|.....|..+|+.|+.+|+ +.+-++.+-
T Consensus 200 ~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l 239 (324)
T 1umd_B 200 REGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTL 239 (324)
T ss_dssp ECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCEE
T ss_pred ecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEecee
Confidence 445679999999999999999999999986 566665554
No 14
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=26.75 E-value=72 Score=25.11 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=32.1
Q ss_pred hccCCEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEee
Q 032962 45 MQQHNEVELSALGMAIATVVTIAEILKNNGL-AVEKKITTS 84 (130)
Q Consensus 45 L~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~ 84 (130)
++...+|.|=|.|.....|..+|+.|+.+|+ +.+-++.+-
T Consensus 198 ~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l 238 (324)
T 1w85_B 198 KREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTV 238 (324)
T ss_dssp EECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEE
T ss_pred EecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeee
Confidence 3445679999999999999999999999986 566555553
No 15
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=26.56 E-value=33 Score=30.30 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=27.1
Q ss_pred EEeeccchHHHHHHHHHHHHhCCc-eeEEEEEeee
Q 032962 52 ELSALGMAIATVVTIAEILKNNGL-AVEKKITTST 85 (130)
Q Consensus 52 ~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~t 85 (130)
++|+||+-|..| .+.-+||.+|+ ++..||+-..
T Consensus 12 v~s~lgkgi~~a-s~g~ll~~~g~~v~~~k~dpyl 45 (535)
T 3nva_A 12 VLSSVGKGTLVA-SIGMLLKRRGYNVTAVKIDPYI 45 (535)
T ss_dssp CSTTTTHHHHHH-HHHHHHHHTTCCEEEEEEECSS
T ss_pred cccCcchHHHHH-HHHHHHHHCCceEEEEecCcce
Confidence 468999988644 78999999999 8899987643
No 16
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=25.77 E-value=30 Score=28.52 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=26.7
Q ss_pred EEeeccchHHHHHHHHHHHHhCCc-eeEEEEEeee
Q 032962 52 ELSALGMAIATVVTIAEILKNNGL-AVEKKITTST 85 (130)
Q Consensus 52 ~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~t 85 (130)
++|+||+-|..| .++-+||.+|+ ++..||+-..
T Consensus 32 VvSglGKGi~aa-SlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 32 VISGIGKGIIAS-SVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp SSTTSCHHHHHH-HHHHHHHTTTCCEECCEEECBC
T ss_pred cccccchHHHHH-HHHHHHHHCCCeeEEEecCCce
Confidence 468999998654 78999999999 7888887643
No 17
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=25.26 E-value=73 Score=27.90 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=30.2
Q ss_pred CEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 49 NEVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 49 ~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
.+|.|=|.|.-...|+.+|+.|+.+|+ +.+-++.+
T Consensus 542 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~ 577 (651)
T 2e6k_A 542 PQGVLVATGSEVHLALRAQALLREKGVRVRVVSLPS 577 (651)
T ss_dssp CSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCcEEEEecCc
Confidence 679999999999999999999999987 56666554
No 18
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=24.82 E-value=75 Score=28.02 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.0
Q ss_pred CCEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 48 HNEVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 48 ~~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
..+|.|=|.|.-...|+.+|+.|+.+|+ +.+-+..+
T Consensus 525 g~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~~ 561 (632)
T 3l84_A 525 EAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPC 561 (632)
T ss_dssp TCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSB
T ss_pred CCCEEEEEechHHHHHHHHHHHHHhcCCCeEEEecCc
Confidence 5779999999999999999999999997 66666555
No 19
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=22.98 E-value=73 Score=28.00 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=30.4
Q ss_pred CEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 49 NEVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 49 ~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
.+|.|=|.|.-...|+.+|+.|+.+|+ +.+-++.+
T Consensus 550 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~~~Vv~~~~ 585 (669)
T 2r8o_A 550 PELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPS 585 (669)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHHHHTCCEEEEECSC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCCeEEEEecc
Confidence 679999999999999999999999987 56666555
No 20
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=22.26 E-value=93 Score=27.90 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=30.0
Q ss_pred EEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 50 EVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 50 eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
.|.|=|.|.-...|+.+|+.|+.+|+ +.+.+..+
T Consensus 586 dvtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~ 620 (700)
T 3rim_A 586 DVILIATGSEVQLAVAAQTLLADNDILARVVSMPC 620 (700)
T ss_dssp SEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSC
T ss_pred CEEEEEechHHHHHHHHHHHHHhcCCCeEEEEecc
Confidence 79999999999999999999999987 66666654
No 21
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=22.19 E-value=90 Score=27.88 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=29.8
Q ss_pred EEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 50 EVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 50 eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
+|.|=|.|.-...|+.+|+.|+.+|+ +.+-+..+
T Consensus 578 dvtiia~G~~v~~Al~Aa~~L~~~GI~~~Vid~~~ 612 (690)
T 3m49_A 578 DVILLATGSEVSLAVEAQKALAVDGVDASVVSMPS 612 (690)
T ss_dssp SEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEEEechHHHHHHHHHHHHHhcCCCeEEEeccc
Confidence 79999999999999999999999997 66666554
No 22
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=22.16 E-value=91 Score=27.46 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=30.2
Q ss_pred CEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 49 NEVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 49 ~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
.+|.|=|.|.-...|+.+|+.|+.+|+ +.+-++.+
T Consensus 563 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vv~~~~ 598 (675)
T 1itz_A 563 PDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVS 598 (675)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCcEEEEEecc
Confidence 679999999999999999999999987 56666555
No 23
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=21.80 E-value=86 Score=27.65 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=29.9
Q ss_pred CEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEe
Q 032962 49 NEVELSALGMAIATVVTIAEILKNNGL-AVEKKITT 83 (130)
Q Consensus 49 ~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T 83 (130)
.+|.|=|.|.-...|+.+|+.|+.+|+ +.+-+..+
T Consensus 555 ~dvtiva~G~~v~~al~Aa~~L~~~Gi~~~Vvd~~~ 590 (680)
T 1gpu_A 555 PDIILVATGSEVSLSVEAAKTLAAKNIKARVVSLPD 590 (680)
T ss_dssp CSEEEEECTHHHHHHHHHHHHHHTTTCCEEEEECSC
T ss_pred CCEEEEEEcHHHHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 679999999999999999999999987 56655544
No 24
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=21.65 E-value=93 Score=27.14 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=30.8
Q ss_pred EEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEeee
Q 032962 50 EVELSALGMAIATVVTIAEILKNNGL-AVEKKITTST 85 (130)
Q Consensus 50 eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~t 85 (130)
+|.|=|.|.....|+.+|+.|+.+|+ +.+-+++|-.
T Consensus 500 dv~iva~G~~v~~al~Aa~~L~~~Gi~v~Vidlr~l~ 536 (616)
T 3mos_A 500 QVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIK 536 (616)
T ss_dssp EEEEECCTHHHHHHHHHHHHHHTTTCEEEEEECSEEE
T ss_pred CEEEEEeCHHHHHHHHHHHHHHhcCCCEEEEEeCccC
Confidence 49999999999999999999999997 6666666544
No 25
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=20.70 E-value=28 Score=26.88 Aligned_cols=53 Identities=30% Similarity=0.461 Sum_probs=33.8
Q ss_pred chhHHHHHHHhccCC-EEEEeecc------------chHHHHHHHHHHHHhCCceeEEEEEeeeeE
Q 032962 35 FFYVNLAKRYMQQHN-EVELSALG------------MAIATVVTIAEILKNNGLAVEKKITTSTVD 87 (130)
Q Consensus 35 ~~Yv~lAk~~L~g~~-eV~LsAlG------------~AIs~AV~vAEiLkrr~~a~ikkI~T~t~~ 87 (130)
..|.+++++||..++ .+.|.=+. +||-.-|..-.-||.+||..+..|-.++..
T Consensus 115 Tkyp~l~~~yf~~~gi~~~ii~l~GsvE~ap~~GlAD~IvDivsTG~TLr~NgL~~ie~I~~ssA~ 180 (208)
T 1z7m_E 115 SKYPRVTKKYFAQKQEDIEIIKLEGSVELGPVVGLADAIVDIVETGNTLSANGLEVIEKISDISTR 180 (208)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEECSSCTTHHHHTTSCSEEEEEESSSHHHHTTTCEEEEEEEECCEE
T ss_pred ECchHHHHHHHHHcCCceEEEECCCceeeccCCCcccEEEEEeCChHHHHHCCCEEeEEEEeeEEE
Confidence 459999999997422 25555333 344444556677888888777666555543
No 26
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=20.50 E-value=99 Score=24.64 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=32.0
Q ss_pred hccCCEEEEeeccchHHHHHHHHHHHHhC-Cc-eeEEEEEee
Q 032962 45 MQQHNEVELSALGMAIATVVTIAEILKNN-GL-AVEKKITTS 84 (130)
Q Consensus 45 L~g~~eV~LsAlG~AIs~AV~vAEiLkrr-~~-a~ikkI~T~ 84 (130)
+....+|.|=|.|.....|..+|+.|+.+ |+ +.+-++.+-
T Consensus 216 ~~~g~dv~iia~G~~~~~a~~Aa~~L~~~~Gi~v~vi~~~~l 257 (342)
T 2bfd_B 216 IQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTI 257 (342)
T ss_dssp EECCSSEEEEECTTHHHHHHHHHHHHHHHHCCCEEEEECCEE
T ss_pred eccCCCEEEEEECHHHHHHHHHHHHHHhhcCCCEEEEeeeec
Confidence 34446789999999999999999999988 86 566565554
No 27
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=20.03 E-value=1.2e+02 Score=24.31 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=31.7
Q ss_pred hccCCEEEEeeccchHHHHHHHHHHHHhCCc-eeEEEEEee
Q 032962 45 MQQHNEVELSALGMAIATVVTIAEILKNNGL-AVEKKITTS 84 (130)
Q Consensus 45 L~g~~eV~LsAlG~AIs~AV~vAEiLkrr~~-a~ikkI~T~ 84 (130)
+....+|.|=|.|.....|..+++.|+.+|+ +.+-++.+-
T Consensus 213 ~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~l 253 (341)
T 2ozl_B 213 ERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTI 253 (341)
T ss_dssp EECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCEE
T ss_pred eccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeeee
Confidence 3344678899999999999999999999986 566555553
Done!