BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032984
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P63966|DNAJ2_MYCTU Chaperone protein DnaJ 2 OS=Mycobacterium tuberculosis GN=dnaJ2
PE=3 SV=1
Length = 382
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLTSRPCPTCRGVGVVI 198
Query: 99 CSKCK 103
C+
Sbjct: 199 PDPCQ 203
>sp|P63967|DNAJ2_MYCBO Chaperone protein DnaJ 2 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaJ2 PE=3 SV=1
Length = 382
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCQGKGTNGDSVPIPCDTCGGRGEVQTVQRSLLGQMLTSRPCPTCRGVGVVI 198
Query: 99 CSKCK 103
C+
Sbjct: 199 PDPCQ 203
>sp|Q6A997|DNAJ1_PROAC Chaperone protein DnaJ 1 OS=Propionibacterium acnes (strain
KPA171202 / DSM 16379) GN=dnaJ1 PE=3 SV=1
Length = 392
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNN-----RIYRRCPTCRAVGYV 97
EV+ ++C C GKG + CD C G+ + Q + R + CPTC G V
Sbjct: 140 EVDTAVVCPKCQGKGAQSGSEPVTCDTCQGRGEVITVQRSFLGDIRTSQPCPTCHGYGTV 199
Query: 98 LCSKCK 103
+ C+
Sbjct: 200 IPDPCQ 205
>sp|Q73XZ6|DNAJ1_MYCPA Chaperone protein DnaJ 1 OS=Mycobacterium paratuberculosis (strain
ATCC BAA-968 / K-10) GN=dnaJ1 PE=3 SV=1
Length = 381
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C+GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 139 VDTAVLCDRCHGKGTNGDSAPVPCDTCGGRGEVQTVQRSLLGQVMTSRPCPTCRGVGVVI 198
Query: 99 CSKCK 103
C
Sbjct: 199 PDPCH 203
>sp|Q49762|DNAJ2_MYCLE Chaperone protein DnaJ 2 OS=Mycobacterium leprae (strain TN)
GN=dnaJ2 PE=3 SV=1
Length = 378
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C+ C GKG + CD CGG+ Q + + R CPTCR VG V+
Sbjct: 135 VDTAVLCDRCQGKGTNGDSAPIPCDTCGGRGEVQTVQRSLLGQMVTARPCPTCRGVGVVI 194
Query: 99 CSKC 102
C
Sbjct: 195 PDPC 198
>sp|Q7UM96|DNAJ_RHOBA Chaperone protein DnaJ OS=Rhodopirellula baltica (strain SH1)
GN=dnaJ PE=3 SV=1
Length = 391
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C++C+G G + C CGGQ +++ R+ CPTC+ G + C KC+
Sbjct: 148 VSCDTCDGSGAAAGSEPVTCTMCGGQGQVIQSAGILRVQTTCPTCKGAGKQIGEPCGKCR 207
>sp|B6IVA5|DNAJ_RHOCS Chaperone protein DnaJ OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=dnaJ PE=3 SV=1
Length = 379
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
+ CESCNG G + C C G V+AQ I R CP C VG V+ C+
Sbjct: 148 VACESCNGTGAEGGSTPIACPTCNGH-GKVRAQQGFFTIERTCPACHGVGRVIKDPCRT 205
>sp|B2IBR5|DNAJ_BEII9 Chaperone protein DnaJ OS=Beijerinckia indica subsp. indica (strain
ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaJ PE=3 SV=1
Length = 372
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
I CE+C+G G +C CGGQ V+AQ I R CP C G ++ C+
Sbjct: 140 ITCEACDGTGAKAGAKPRICPTCGGQ-GRVRAQQGFFAIERTCPQCHGRGEIIDDPCQA 197
>sp|P39102|XDJ1_YEAST DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=XDJ1 PE=1 SV=2
Length = 459
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 25/97 (25%)
Query: 34 HSLKSKPALCAPVKQEVEVGIMCESCNGKG----------------WLVCDFCGGQ-KTN 76
H KP V +VE CESC GKG W+VC+ C G+ K
Sbjct: 163 HGSGWKPKRKIHVTHDVE----CESCAGKGSKERLKRFGPGLVASQWVVCEKCNGKGKYT 218
Query: 77 VKAQNNRIYRRCPTCRAVGYVLCSKCKVFKCVTFPNY 113
+ +N + + CP C +G L SK ++ P +
Sbjct: 219 KRPKNPKNF--CPDCAGLG--LLSKKEIITVNVAPGH 251
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
Query: 46 VKQEVEVGIMCESCNGKGW-----------LVCDFCGGQKTNVKAQNNRIYRRCPTCRAV 94
+K +++ ++C C+G GW + C+ C G K R+ R P A
Sbjct: 149 LKFDLKRQVICIKCHGSGWKPKRKIHVTHDVECESCAG-----KGSKERLKRFGPGLVAS 203
Query: 95 GYVLCSKC 102
+V+C KC
Sbjct: 204 QWVVCEKC 211
>sp|Q2J319|DNAJ_RHOP2 Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain HaA2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CESC+G G C CGG +AQ + R CP+C+ G ++
Sbjct: 141 EIPVSVTCESCSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQIIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 54 IMCESCNGKGWLVCDFCGGQKTNVKAQNNRIYRRCPTCRAVGYVLCSKCKVFKC 107
I C CNG+G+LV ++ + + CP+C+ G + +KCK KC
Sbjct: 172 ITCSDCNGEGFLV------EQRRTLLGMFQTKKTCPSCKGEGQTIKNKCK--KC 217
>sp|Q5YZX0|DNAJ1_NOCFA Chaperone protein DnaJ 1 OS=Nocardia farcinica (strain IFM 10152)
GN=dnaJ1 PE=3 SV=1
Length = 384
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 50 VEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQNNRI-----YRRCPTCRAVGYVL 98
V+ ++C++C+G G + C+ CGG Q + + R CPTCR G +
Sbjct: 140 VDTAVLCDACHGSGTHGNSKPVRCETCGGAGEVQSVQRSFLGQVLTSRPCPTCRGAGETI 199
Query: 99 ---CSKC 102
C KC
Sbjct: 200 PDPCHKC 206
>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559
OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2
Length = 454
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 56 CESCNGKGWLVCDFCGGQKTNVKAQN---NRIYRRCPTCRAVGYVLCSKC 102
C++C G L C C G K +V + + +C C VG V C C
Sbjct: 405 CQTCGGYRLLPCPSCNGSKKSVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454
>sp|B3WEQ6|DNAJ_LACCB Chaperone protein DnaJ OS=Lactobacillus casei (strain BL23) GN=dnaJ
PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 22/58 (37%)
Query: 54 IMCESCNGKGWL---------------VCDFCGGQKTNVKAQNNRIYRRCPTCRAVGY 96
+ C C+G G++ VCD CGG +K +CPTC G+
Sbjct: 171 VTCHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK-------EKCPTCHGTGH 221
>sp|Q038N5|DNAJ_LACC3 Chaperone protein DnaJ OS=Lactobacillus casei (strain ATCC 334)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 22/58 (37%)
Query: 54 IMCESCNGKGWL---------------VCDFCGGQKTNVKAQNNRIYRRCPTCRAVGY 96
+ C C+G G++ VCD CGG +K +CPTC G+
Sbjct: 171 VTCHKCHGSGYIQVQRNTAFGAMMTRQVCDVCGGTGKEIK-------EKCPTCHGTGH 221
>sp|Q21CI1|DNAJ_RHOPB Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain
BisB18) GN=dnaJ PE=3 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CESC+G G C CGG +AQ + R CP C+ G +
Sbjct: 141 EIPVSVTCESCSGTGAKAGTKPKTCSMCGGAGRVRQAQGFFTLERTCPGCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|P47265|DNAJ_MYCGE Chaperone protein DnaJ OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=dnaJ PE=3 SV=1
Length = 389
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 22/64 (34%)
Query: 55 MCESCNGKGWLV---------------CDFCGGQKTNVKAQNNRIYRRCPTCRAVGYVLC 99
+C+ CNG G+++ C C GQ +K +C TCR+ Y +
Sbjct: 181 LCKDCNGNGFVIKNQRSIFGTIQSQVLCSTCNGQGKQIKV-------KCKTCRSNKYTVT 233
Query: 100 SKCK 103
++ K
Sbjct: 234 NQIK 237
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1
Length = 340
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 56 CESCNGKGWLVCDFCGGQKTNVKAQNNRIY-------RRCPTCRAVGYVLCSKCK 103
C C+G G + C C G K K Q R + RRC TC G C+ CK
Sbjct: 189 CSGCHGAGMVRCSSCSGTKRKAK-QPRRCHLCSGSGRRRCSTCSGRGNKTCATCK 242
>sp|O84345|DNAJ_CHLTR Chaperone protein DnaJ OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 21 MPSSSSSSR---SRPSHSLKSKPALCAPVKQEVEVG--IMCESCNG------KGWLVCDF 69
M S SSR S+ H S V++E+ V C++C+G KG VCD
Sbjct: 122 MRGGSESSRQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANTAKGVKVCDR 181
Query: 70 CGGQKTNVKAQNN-RIYRRCPTCRAVGYVLCSKCKV 104
C G V+++ + CP C G V+ C V
Sbjct: 182 CKGSGQVVQSRGFFSMASTCPDCSGEGRVITDPCSV 217
>sp|B0BBX5|DNAJ_CHLTB Chaperone protein DnaJ OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=dnaJ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 21 MPSSSSSSR---SRPSHSLKSKPALCAPVKQEVEVG--IMCESCNG------KGWLVCDF 69
M S SSR S+ H S V++E+ V C++C+G KG VCD
Sbjct: 122 MRGGSESSRQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANTAKGVKVCDR 181
Query: 70 CGGQKTNVKAQNN-RIYRRCPTCRAVGYVLCSKCKV 104
C G V+++ + CP C G V+ C V
Sbjct: 182 CKGSGQVVQSRGFFSMASTCPDCSGEGRVITDPCSV 217
>sp|Q3KM17|DNAJ_CHLTA Chaperone protein DnaJ OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=dnaJ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 21 MPSSSSSSR---SRPSHSLKSKPALCAPVKQEVEVG--IMCESCNG------KGWLVCDF 69
M S SSR S+ H S V++E+ V C++C+G KG VCD
Sbjct: 122 MRGGSESSRQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANTAKGVKVCDR 181
Query: 70 CGGQKTNVKAQNN-RIYRRCPTCRAVGYVLCSKCKV 104
C G V+++ + CP C G V+ C V
Sbjct: 182 CKGSGQVVQSRGFFSMASTCPDCSGEGRVITDPCSV 217
>sp|B0B7R0|DNAJ_CHLT2 Chaperone protein DnaJ OS=Chlamydia trachomatis serovar L2 (strain
434/Bu / ATCC VR-902B) GN=dnaJ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 0.96, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 21 MPSSSSSSR---SRPSHSLKSKPALCAPVKQEVEVG--IMCESCNG------KGWLVCDF 69
M S SSR S+ H S V++E+ V C++C+G KG VCD
Sbjct: 122 MRGGSESSRQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANTAKGVKVCDR 181
Query: 70 CGGQKTNVKAQNN-RIYRRCPTCRAVGYVLCSKCKV 104
C G V+++ + CP C G V+ C V
Sbjct: 182 CKGSGQVVQSRGFFSMASTCPDCSGEGRVITDPCSV 217
>sp|Q70WY6|DNAJ_FUSNP Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp.
polymorphum GN=dnaJ PE=3 SV=1
Length = 394
Score = 32.3 bits (72), Expect = 0.98, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 12/59 (20%)
Query: 56 CESCNGKG-----WLVCDFCGGQKTNVKAQNNRIY------RRCPTCRAVGYVLCSKCK 103
CE C+G G C C GQ T +K Q I CP C G V KCK
Sbjct: 163 CEHCHGTGAEDDKMKTCPTCNGQGT-IKTQQRTILGVMQSQSVCPDCHGTGKVPEKKCK 220
>sp|A0LJ41|DNAJ_SYNFM Chaperone protein DnaJ OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=dnaJ PE=3 SV=1
Length = 384
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 56 CESCNGKG------WLVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSKCKV 104
CE CNG G VC C G V++Q RI C C+ +G VL S CK
Sbjct: 147 CEECNGSGAEPGTRETVCPVCQGSGQVVQSQGFFRISATCTRCQGMGKVLVSPCKT 202
>sp|Q5FSL4|DNAJ_GLUOX Chaperone protein DnaJ OS=Gluconobacter oxydans (strain 621H)
GN=dnaJ PE=3 SV=1
Length = 380
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 49 EVEVGIMCESCNGKGWL-------VCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLC 99
EV + CE+C+G G C C G V+AQ + R CPTC G +
Sbjct: 142 EVRTRVTCEACHGSGSADPKAGSSTCPTCHG-AGKVRAQQGFFLVERPCPTCHGSGRTVA 200
Query: 100 SKCKV 104
+ CKV
Sbjct: 201 NPCKV 205
>sp|Q75WD2|DNAJ_ACEP3 Chaperone protein DnaJ OS=Acetobacter pasteurianus (strain NBRC
3283 / LMG 1513 / CCTM 1153) GN=dnaJ PE=3 SV=2
Length = 380
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 46 VKQEVEV--GIMCESCNG-------KGWLVCDFCGGQKTNVKAQNNR--IYRRCPTCRAV 94
VK++V V + CE+C+G G VC C G V+AQ + R CPTC
Sbjct: 137 VKKDVRVITRVACEACHGTGSDDGASGVEVCPSCHG-AGKVRAQQGFFVVERPCPTCHGA 195
Query: 95 GYVLCSKCKV 104
G V+ + CKV
Sbjct: 196 GKVVKNPCKV 205
>sp|A6QBG7|DNAJ_SULNB Chaperone protein DnaJ OS=Sulfurovum sp. (strain NBC37-1) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 20/61 (32%)
Query: 56 CESCNGKG-----WLVCDFCGGQKTNV---------------KAQNNRIYRRCPTCRAVG 95
CE C G G CD+CGGQ + + +I ++CP+C+ G
Sbjct: 151 CEECGGTGAKDGKMETCDYCGGQGQVLMRQGPMQFAQTCPKCHGEGRKIAQKCPSCQGKG 210
Query: 96 Y 96
Y
Sbjct: 211 Y 211
>sp|Q7Z6J4|FGD2_HUMAN FYVE, RhoGEF and PH domain-containing protein 2 OS=Homo sapiens
GN=FGD2 PE=2 SV=1
Length = 655
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 82 NRIYRRCPTCRAVGYVLCSKCKVFKCVTFPNYDD 115
N + RR CRA GYV+C++C ++ YDD
Sbjct: 472 NALTRRRHHCRACGYVVCARCSDYRAEL--KYDD 503
>sp|O01738|DEFI8_CAEEL Differentially expressed in FDCP 8 homolog OS=Caenorhabditis
elegans GN=F20H11.1 PE=3 SV=2
Length = 486
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Query: 56 CESCNGKGWLVCDFCGGQKTNVKAQNNRIY------RRCPTCRAVGYVLCSKCKVFKC 107
CE+C G G+ C+ C NV +N +Y R C TC AV + C + K C
Sbjct: 405 CETCAGNGFF-CELC--DDINVDQKNKILYPFTENTRSCATCLAVYHKKCFERKSLNC 459
>sp|Q8RH03|DNAJ_FUSNN Chaperone protein DnaJ OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 12/59 (20%)
Query: 56 CESCNGKG-----WLVCDFCGGQKTNVKAQNNRIY------RRCPTCRAVGYVLCSKCK 103
CE+C+G G C C GQ T ++ Q I CP C G V KCK
Sbjct: 161 CENCHGTGGEDDKMKTCPTCNGQGT-IRTQQRTILGVMQSQSVCPDCHGTGKVPEKKCK 218
>sp|A7E316|K226L_BOVIN Uncharacterized protein KIAA0226-like OS=Bos taurus GN=KIAA0226L
PE=2 SV=1
Length = 663
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 36 LKSKPALCAPV-----KQEVEVGIMCESCNGKGWLVCDFCGGQKTNVKAQNNRIYRRCPT 90
+K K L AP+ K +E CE C GKG+ +C+FC Q RRC
Sbjct: 570 VKVKKGLLAPLLKDILKASLEHVASCELCQGKGF-ICEFCRSTAVIFPFQTATC-RRCSA 627
Query: 91 CRAVGYVLC---SKC 102
CRA + C SKC
Sbjct: 628 CRACFHKQCFQSSKC 642
>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206
OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2
Length = 582
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 48 QEVEVGIMCESCNGKGWLVCDFCGGQKTNVKAQN---NRIYRRCPTCRAVGYVLCSKC 102
+ + C++C G L C C G K ++ + + +C C VG + C C
Sbjct: 525 KSIATAYTCQTCGGYRMLPCPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC 582
>sp|B8DQW8|DNAJ_DESVM Chaperone protein DnaJ OS=Desulfovibrio vulgaris (strain Miyazaki F
/ DSM 19637) GN=dnaJ PE=3 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 54 IMCESCNGKGWL------VCDFCGGQKTNVKAQNN-RIYRRCPTCRAVGYVL---CSKCK 103
+ C+ CNG G C CGG ++Q +I CP CR G V+ C KCK
Sbjct: 146 VTCDECNGSGAAAGTKPETCRHCGGNGQIRQSQGFFQIAVPCPVCRGEGQVIPTPCPKCK 205
>sp|Q5WT86|SYFA_LEGPL Phenylalanine--tRNA ligase alpha subunit OS=Legionella pneumophila
(strain Lens) GN=pheS PE=3 SV=1
Length = 338
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 10 ASLAKVK-----LFSIMPSSSSSSRSRPSHSLKSKPALCAPVKQEVEVGIMCESCNGKGW 64
A+LA +K FS + R RPS+ ++P+ EV I C CNGKG
Sbjct: 219 ATLAGLKGLLQDFFSYFFGRELALRFRPSYFPFTEPS--------AEVDIECTQCNGKGC 270
Query: 65 LVCDFCG 71
C F G
Sbjct: 271 RSCKFTG 277
>sp|Q8BY35|FGD2_MOUSE FYVE, RhoGEF and PH domain-containing protein 2 OS=Mus musculus
GN=Fgd2 PE=1 SV=1
Length = 655
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 82 NRIYRRCPTCRAVGYVLCSKCKVFK 106
N + RR CRA GYV+C+KC ++
Sbjct: 472 NALTRRRHHCRACGYVVCAKCSDYR 496
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 59 CNGKGWLVCDFCGGQKTNVKAQNNRIYRRCPTC 91
C G++VC C + +K +NR R C TC
Sbjct: 481 CRACGYVVCAKCSDYRAELKYDSNRPNRVCLTC 513
>sp|Q5NFG8|DNAJ_FRATT Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=dnaJ PE=3 SV=1
Length = 374
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 23 SSSSSSRSRPSHSLKSKPALCAPVKQ-----EVEVGI----MCESCNGKG-----WLVCD 68
+S S+RSR S + L +++ E E+ I C+SC+G G C
Sbjct: 101 TSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCH 160
Query: 69 FCGGQKTNVKAQNNRIYRR-CPTCRAVGYVLCSKC 102
C GQ T + Q + + CP C GY + C
Sbjct: 161 ACHGQGTIRRQQGFFAFEQTCPVCNGTGYSITDPC 195
>sp|Q14GX0|DNAJ_FRAT1 Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=dnaJ PE=3 SV=1
Length = 374
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 23 SSSSSSRSRPSHSLKSKPALCAPVKQ-----EVEVGI----MCESCNGKG-----WLVCD 68
+S S+RSR S + L +++ E E+ I C+SC+G G C
Sbjct: 101 TSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCH 160
Query: 69 FCGGQKTNVKAQNNRIYRR-CPTCRAVGYVLCSKC 102
C GQ T + Q + + CP C GY + C
Sbjct: 161 ACHGQGTIRRQQGFFAFEQTCPVCNGTGYSITDPC 195
>sp|A4IX29|DNAJ_FRATW Chaperone protein DnaJ OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=dnaJ PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 23 SSSSSSRSRPSHSLKSKPALCAPVKQ-----EVEVGI----MCESCNGKG-----WLVCD 68
+S S+RSR S + L +++ E E+ I C+SC+G G C
Sbjct: 98 TSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCH 157
Query: 69 FCGGQKTNVKAQNNRIYRR-CPTCRAVGYVLCSKC 102
C GQ T + Q + + CP C GY + C
Sbjct: 158 ACHGQGTIRRQQGFFAFEQTCPVCNGTGYSITDPC 192
>sp|O08356|DNAJ_RHOS7 Chaperone protein DnaJ OS=Rhodopseudomonas sp. (strain No.7)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|B3Q973|DNAJ_RHOPT Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain TIE-1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|Q6NCY3|DNAJ_RHOPA Chaperone protein DnaJ OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 49 EVEVGIMCESCNGKGW------LVCDFCGGQKTNVKAQN-NRIYRRCPTCRAVGYVLCSK 101
E+ V + CE+C+G G C CGG +AQ + R CP+C+ G +
Sbjct: 141 EIPVSVTCEACSGTGAKAGTKPKTCSTCGGAGRVRQAQGFFTLERTCPSCQGRGQTIEDP 200
Query: 102 C 102
C
Sbjct: 201 C 201
>sp|P48207|DNAJ_FRATU Chaperone protein DnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 23 SSSSSSRSRPSHSLKSKPALCAPVKQ-----EVEVGI----MCESCNGKG-----WLVCD 68
+S S+RSR S + L +++ E E+ I C+SC+G G C
Sbjct: 98 TSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCH 157
Query: 69 FCGGQKTNVKAQNNRIYRR-CPTCRAVGYVLCSKC 102
C GQ T + Q + + CP C GY + C
Sbjct: 158 ACHGQGTIRRQQGFFAFEQTCPVCNGTGYSITDPC 192
>sp|Q2A327|DNAJ_FRATH Chaperone protein DnaJ OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=dnaJ PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 15/95 (15%)
Query: 23 SSSSSSRSRPSHSLKSKPALCAPVKQ-----EVEVGI----MCESCNGKG-----WLVCD 68
+S S+RSR S + L +++ E E+ I C+SC+G G C
Sbjct: 98 TSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCH 157
Query: 69 FCGGQKTNVKAQNNRIYRR-CPTCRAVGYVLCSKC 102
C GQ T + Q + + CP C GY + C
Sbjct: 158 ACHGQGTIRRQQGFFAFEQTCPVCNGTGYSITDPC 192
>sp|Q96M96|FGD4_HUMAN FYVE, RhoGEF and PH domain-containing protein 4 OS=Homo sapiens
GN=FGD4 PE=1 SV=2
Length = 766
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 82 NRIYRRCPTCRAVGYVLCSKCKVFK 106
N + RR CRA GYV+C KC +K
Sbjct: 573 NALTRRRHHCRACGYVVCWKCSDYK 597
>sp|A1STE5|DNAJ_PSYIN Chaperone protein DnaJ OS=Psychromonas ingrahamii (strain 37)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 46 VKQEVEV--GIMCESCNGKGWL------VCDFCGGQ-KTNVKAQNNRIYRRCPTCRAVGY 96
+ +E+++ + CE CNG G C C GQ + ++ + + CPTCR G
Sbjct: 134 ISKEIQIPTQVHCEQCNGSGAKKGTEAKTCGTCYGQGQVQMRQGFFAVNQACPTCRGQGK 193
Query: 97 VLCSKCKVFKCVTFPNYD 114
++ C KC Y+
Sbjct: 194 IISDPC--HKCHGHGRYE 209
>sp|A3PNM0|DNAJ_RHOS1 Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=dnaJ PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
+ C++C G G + C C G V+AQ + R CPTC +G ++ + CKV
Sbjct: 152 VACDACKGTGAEGGAEAVTCPTCSGM-GKVRAQQGFFTVERTCPTCNGMGQIVKNPCKV 209
>sp|B9KPP3|DNAJ_RHOSK Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=dnaJ PE=3 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
+ C++C G G + C C G V+AQ + R CPTC +G ++ + CKV
Sbjct: 151 VACDACKGTGAEGGAEAVTCPTCSGM-GKVRAQQGFFTVERTCPTCNGMGQIVKNPCKV 208
>sp|Q3IYM8|DNAJ_RHOS4 Chaperone protein DnaJ OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dnaJ PE=3 SV=1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 54 IMCESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
+ C++C G G + C C G V+AQ + R CPTC +G ++ + CKV
Sbjct: 152 VACDACKGTGAEGGAEAVTCPTCSGM-GKVRAQQGFFTVERTCPTCNGMGQIVKNPCKV 209
>sp|Q64VI7|DNAJ_BACFR Chaperone protein DnaJ OS=Bacteroides fragilis (strain YCH46)
GN=dnaJ PE=3 SV=1
Length = 394
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 11/62 (17%)
Query: 54 IMCESCNG------KGWLVCDFCGGQKTNVKAQNN-----RIYRRCPTCRAVGYVLCSKC 102
I C C+G G C C G + ++ Q + CPTC G ++ KC
Sbjct: 163 IPCSHCHGTGAEGNSGSETCPTCKGSGSVIRNQQTILGTMQTRTTCPTCNGEGKIIKDKC 222
Query: 103 KV 104
KV
Sbjct: 223 KV 224
>sp|Q52702|DNAJ_RHOCA Chaperone protein DnaJ OS=Rhodobacter capsulatus GN=dnaJ PE=3 SV=1
Length = 384
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 56 CESCNGKGW------LVCDFCGGQKTNVKAQNN--RIYRRCPTCRAVGYVLCSKCKV 104
C SCNG G C C G V+AQN + R CPTC G V+ + C+V
Sbjct: 156 CGSCNGTGAEGGAEPQTCPTCSGL-GKVRAQNGFFTVERTCPTCGGQGQVVKNPCRV 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,863,103
Number of Sequences: 539616
Number of extensions: 1815746
Number of successful extensions: 6443
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 6270
Number of HSP's gapped (non-prelim): 340
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)