BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032995
(129 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 1 MENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
M + L EWF VD++ +G+I+ +L A + + FSL+ ++++ MYD + +G ++F
Sbjct: 23 MNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITF 82
Query: 61 EEFVELNKFLLKVQHAFSDLE-RGRGYLVPDNVYEALVKIGFSLDSPAF 108
+EF +L+ F+L ++ F + G G L + V AL+ G+ + F
Sbjct: 83 DEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTF 131
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F + DS G + + +++ A S Q ++R +D R G++ F+++VEL
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
Query: 67 NKFLLKVQHAFSDLERGR 84
+ F+ +V++ F+ +R R
Sbjct: 155 SIFVCRVRNVFAFYDRER 172
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 9 EWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNK 68
+WF VD +++G++ +L G + S +M+R++D D NG +SF EF+ + K
Sbjct: 55 QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK 114
Query: 69 FLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDS 105
F+ + F +R R G L P + AL ++GF ++
Sbjct: 115 FMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQ 152
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 9 EWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNK 68
+WF VD +++G++ +L G + S +M+R++D D NG +SF EF+ + K
Sbjct: 55 QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK 114
Query: 69 FLLKVQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDS 105
F+ + F R R G L P + AL ++GF ++
Sbjct: 115 FMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQ 152
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A L+E F+ +D++K+G I +LK + S + + + D D +GT+ ++
Sbjct: 24 EEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYK 83
Query: 62 EFVELNKFLLKVQH------AFSDLER-GRGYLVPDNVYEALVKIG 100
EF+ L K++ AF+ ++ G GY+ PD + +A + G
Sbjct: 84 EFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 9 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 68
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-SDQFHDI 110
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 10 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-SDQFHDI 111
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 13 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-SDQFHDI 114
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 31 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 90
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-SDQFHDI 132
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 13 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRL-SDQFHDI 114
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D + +G I +LK A + S +IR +D G ++F++F++
Sbjct: 84 DRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 134
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 18 KTGSIAAAQLKH-----AFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLK 72
+ G I A +L+ A G F+L + M+ M D D +GTM F EF EL L
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 73 VQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCE 113
+ F L+ R G + P + +AL +GF L A ++ +
Sbjct: 105 WRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 146
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 32 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 91
Query: 70 LLKVQHAFSDLERGRGYLVPDN-VYEALVKIGFSLDSPAFYTV 111
+ Q+ F +R ++ N + +AL G+ L S F+ +
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-SDQFHDI 133
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
F D + +G I +LK A + S +IR +D G ++F++F++
Sbjct: 99 FRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 153
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 18 KTGSIAAAQLKH-----AFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLK 72
+ G I A +L+ A G F+L + M+ M D D +GTM F EF EL L
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 73 VQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCE 113
+ F + R G + P + +AL +GF L A ++ +
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK 146
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V QMIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 117
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 18 KTGSIAAAQLKH-----AFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLK 72
+ G I A +L+ A G F+L + M+ M D D +GTM F EF EL L
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 73
Query: 73 VQHAFSDLERGR-GYLVPDNVYEALVKIGFSLDSPAFYTVCE 113
+ F + R G + P + +AL +GF L+ ++ +
Sbjct: 74 WRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK 115
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 383
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 274 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 333
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 383
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNL-DFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKF 69
F RVD +++G I+ +L+ A + G F+ V+ +I M+D + ++F EF + K+
Sbjct: 10 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 70 LLKVQHAFSDLERGRGYLVPDN 91
+ Q+ F +R ++ N
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKN 91
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 416
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 349 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 271 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 330
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 331 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 380
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 416
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 309 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 368
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 369 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 418
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 367
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 417
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 367 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 416
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 417
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 417
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 417
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 308 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 367
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 368 EFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 417
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 377 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 299 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 358
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 359 EFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 408
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+A++L+H + V+QMI+ D D +G +++EEFV++
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+A++L+H + V+QMI+ D D +G +++EEFV++
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELN 67
+E F D + G I +L + + + +Q MI D D NGT+ F+EF+ L
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 68 KFLLKVQHAFSDLERG--------RGYLVPDNVYEALVKIGFSL 103
+K A +L+ GY+ + ++ +G L
Sbjct: 73 AKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKL 116
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 114
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 63
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 64 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 113
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 114
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 112
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 114
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 91 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 13 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 72
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 73 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 122
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 84 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 6 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 65
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 66 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 115
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 116
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 117
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 117
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 116
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL 117
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXL 116
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 89 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 11 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 70
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 71 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 120
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 116
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 117
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 117
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 87 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 9 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 68
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 69 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 118
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
+N +RE F D + G ++AA+L+H S V +MIR D D +G +++E
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 62 EFV 64
EFV
Sbjct: 140 EFV 142
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +E F D + G I +L + + + ++ M+ D D NGT+ F
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + ++G L
Sbjct: 67 EFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKL 116
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E L+E F +D++ +G+I +LK + S ++ ++ D D++GT+ +
Sbjct: 7 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG 66
Query: 62 EFVELNKFLLKVQH------AFSDLER-GRGYLVPDNVYEALVKIGFS 102
EF+ L K++ AFS ++ G GY+ D + +A G
Sbjct: 67 EFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLD 114
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +RE FD D++ +G+I A +LK A + +++MI D D +GT+ FE
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 62 EFVEL 66
EF+ +
Sbjct: 87 EFLTM 91
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +RE FD D++ +G+I A +LK A + +++MI D D +GT+ FE
Sbjct: 5 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
Query: 62 EFVEL 66
EF+++
Sbjct: 65 EFLQM 69
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
D ++TG I+ LK + + +Q+MI D D +G ++ EEF
Sbjct: 91 DDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEF 139
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+A++L+H + V+QMI+ D D +G +++EEFV++
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+E F D + G I +L + + + +Q MI D D NGT+ F EF+ L
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +RE FD D++ +G+I A +LK A + +++MI D D +GT+ FE
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
Query: 62 EFV 64
EF+
Sbjct: 85 EFL 87
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 83 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-----VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 67 EFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 114
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 4 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 63
Query: 62 EFVELNKFLLKVQHAFSDLER--------GRGYLVPDNVYEALVKIGFSL 103
EF+ L +K + +L+ G G++ + + +G L
Sbjct: 64 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL 113
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 116
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR + D +G +++EEFV++
Sbjct: 80 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 62 EFVELNKFLLK------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 111
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 117
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 116
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 117
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G G++ + + +G L
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKL 117
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Score = 32.0 bits (71), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ L
Sbjct: 67 EFLNL 71
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D + G I+AA+L+H + V +MIR D D +G +++EEFV++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLKVQHAFSDLER--------GRGYLVPDNVYEALVKIGFSL 103
EF+ L +K + +L+ G G++ + + +G L
Sbjct: 67 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKL 116
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA+L+H + V +MIR + D +G +++EEFV++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIGFSL 103
EF+ + +K ++ AF ++ G GY+ + + +G L
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL 116
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L+E F D ++ G I+AA+L+H + V +MIR D D +G ++++EFV++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+E F D + G I +L + + + +Q MI D D NGT+ F EF+ L
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F D + G I+AA L+H + V +MIR D D +G +++E+FV++
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
+RE F D + G I+AA+L+H + V Q IR D D +G +++EEFV+
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q I D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFP 67
Query: 62 EFV 64
EF+
Sbjct: 68 EFL 70
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E ++E FD D+ KTGSI +LK A D + +++ YD + NG + F+
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 62 EFVEL 66
+F+++
Sbjct: 64 DFLDI 68
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
+RE F D + G I+AA+L+H + V + IR D D +G +++EEFV+
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q I D D NGT++F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFP 66
Query: 62 EFV 64
EF+
Sbjct: 67 EFL 69
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L E F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + R D++++G+I + +L AF + + +IR Y D G M F+ F
Sbjct: 76 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 134
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 135 ISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 167
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L E F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLKVQHAFSDL 80
EF+ L +K Q + +L
Sbjct: 67 EFLSLMARKMKEQDSEEEL 85
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L E F D + G I+AA+L+H + V +MIR D D +G +++EEFV +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLKVQHAFSDL 80
EF+ L +K Q + +L
Sbjct: 67 EFLSLMARKMKEQDSEEEL 85
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + R D++++G+I + +L AF + + +IR Y D G M F+ F
Sbjct: 87 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 145
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 146 ISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 178
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
+RE F D + G I+AA+L+H + V + IR D D +G +++EEFV+
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q I D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFP 66
Query: 62 EFV 64
EF+
Sbjct: 67 EFL 69
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + R D++++G+I + +L AF + + +IR Y D G M F+ F
Sbjct: 87 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 145
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 146 ISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 178
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+RE F + G I+AAQL+H + V +MIR D +G +++E+FV++
Sbjct: 386 IREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQM 445
>pdb|2I7A|A Chain A, Domain Iv Of Human Calpain 13
Length = 174
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 38 FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGRGYLVPDNVYEALV 97
FSL + ++ + + NG + EEF L K L+ QH F ++ G L+ ++++A+
Sbjct: 43 FSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQTSPGVLLSSDLWKAIE 102
Query: 98 KIGF 101
F
Sbjct: 103 NTDF 106
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L L+ + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVELNKFLLK 72
EF+ + ++K
Sbjct: 67 EFLTMMARIMK 77
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + R +++++G+I + +L AF + + +IR Y D G M F+ F
Sbjct: 803 IKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 861
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 862 ISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWL 894
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + R D++++G+I + +L AF + + +IR Y D G M F+ F
Sbjct: 83 IKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFDNF 141
Query: 64 V 64
+
Sbjct: 142 I 142
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
++ W + + D++++G+I +++L AF + + +IR Y D +G M F+ F
Sbjct: 87 IKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYS-DESGNMDFDNF 145
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 146 ISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWL 178
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E L+E F +D++ +G+I +LK + S ++ ++ D D++GT+ +
Sbjct: 20 EEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYG 79
Query: 62 EFV 64
EF+
Sbjct: 80 EFI 82
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLS--VVQQMIRMYDFDRNGTMSFEEFV 64
+RE F D + G I+ A+L+ F + NL ++ + +MIR DFD +G +++EEFV
Sbjct: 85 MREAFKIFDRDGDGFISPAELR--FVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A ++ F + D E TG IA +L + + + +Q +I + + NG ++F
Sbjct: 7 EQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
Query: 62 EFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYEALVKIG 100
EF + ++ ++ AF +R G G++ P + ++ +G
Sbjct: 67 EFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG 113
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 7 LREW---FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
+++W + + D +++G+I +++L AF + + +IR Y D G M F+ F
Sbjct: 76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNF 134
Query: 64 VELNKFLLKVQHAFSDLERGRGYLVPDNVYEAL 96
+ L + AF L++ + N+ E L
Sbjct: 135 ISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWL 167
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFL 70
F + DS+ +G I +L F V +D Q+++ D + +G + FEEFVE+ + +
Sbjct: 403 FQQFDSDGSGKITNEELGRLFGVTEVDDE--TWHQVLQECDKNNDGEVDFEEFVEMMQKI 460
Query: 71 --LKVQH 75
+KV+H
Sbjct: 461 CDVKVKH 467
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MENTAVLREWFDRVDSEKTGSIAAAQLKHAF---------AVGNLDFSL--SVVQQMIRM 49
+E T L + F ++D+ G + +L + V +LD S + V +++
Sbjct: 310 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 369
Query: 50 YDFDRNGTMSFEEFV 64
DFDRNG + + EFV
Sbjct: 370 VDFDRNGYIEYSEFV 384
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF------AVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
LR+ F D+ G I+ ++L+ A VG+ D ++++IR D + +G + F
Sbjct: 104 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRD-----IEEIIRDVDLNGDGRVDF 158
Query: 61 EEFVEL 66
EEFV +
Sbjct: 159 EEFVRM 164
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAF-AVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
++ A F R D+ G I+AA+L A +G++ + V+ M+ D D +G +SF
Sbjct: 6 QDKAERERIFKRFDANGDGKISAAELGEALKTLGSI--TPDEVKHMMAEIDTDGDGFISF 63
Query: 61 EEFVEL---NKFLLK 72
+EF + N+ LLK
Sbjct: 64 QEFTDFGRANRGLLK 78
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF------AVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
LR+ F D+ G I+ ++L+ A VG+ D ++++IR D + +G + F
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRD-----IEEIIRDVDLNGDGRVDF 144
Query: 61 EEFVEL 66
EEFV +
Sbjct: 145 EEFVRM 150
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF------AVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
LR+ F D+ G I+ ++L+ A VG+ D ++++IR D + +G + F
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRD-----IEEIIRDVDLNGDGRVDF 144
Query: 61 EEFVEL 66
EEFV +
Sbjct: 145 EEFVRM 150
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +RE FD D++ TG+I +LK A + +++MI D + G M+F
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 62 EFV 64
+F+
Sbjct: 88 DFL 90
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 18 KTGSIAAAQLKHAFAVGNLD-----FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLK 72
+ G + A +L+ ++ FSL + MI M D D G M F F EL L
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 73 VQHAFSDLER-GRGYLVPDNVYEALVKIGFSLDSPAFYTV 111
+ F +++ G G + + +A+ +G+ L T+
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTI 111
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 18 KTGSIAAAQLKHAFAVGNLD-----FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLK 72
+ G + A +L+ ++ FSL + MI M D D G M F F EL L
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 73 VQHAFSDLER-GRGYLVPDNVYEALVKIGFSLDSPAFYTV 111
+ F +++ G G + + +A+ +G+ L T+
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTI 111
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + +GSI+A++L L S + V ++ D D N + F
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFS 67
Query: 62 EFVELNKFLLKVQHAFSDL--------ERGRGYLVPDNVYEALVKIGFSL 103
EF+ L LK + +L + G G + + L IG L
Sbjct: 68 EFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L E F D G I+AA+LKH + + V +M+R D +G ++ ++F L
Sbjct: 86 LLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAAL 144
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E +RE FD D++ TG+I +LK A + +++MI D + G M+F
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 62 EFV 64
+F+
Sbjct: 63 DFL 65
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNK 68
D ++TG I+ LK + + +Q+MI D D +G +S +EF+ + K
Sbjct: 89 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF------AVGNLDFSLSVVQQMIRMYDFDRNGTMSF 60
LR+ F D+ G I+ ++L+ A VG+ D ++++IR D + +G + F
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRD-----IEEIIRDVDLNGDGRVDF 63
Query: 61 EEFVEL 66
EEFV +
Sbjct: 64 EEFVRM 69
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1
With Calcium Bound
Length = 198
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 REWFDRVDSE-KTGSIAAAQLKHAFAVGNLDFSLS-VVQQMIRMYDFDRNGTMSFEEFVE 65
+W+ + +E +G + + K F + NL S + V+QM +DF+++G + F E+V
Sbjct: 17 HQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVA 76
Query: 66 LNKFLLK 72
+LK
Sbjct: 77 ALSLVLK 83
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSV-----VQQMIRMYDFDRNGTMSFEEFVELNKF 69
D + G I A+L H GN +++ V++MIR D + +G + F EF E+ K
Sbjct: 132 DVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKL 191
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 32.0 bits (71), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELN 67
+E F+ DSE+TG I L+ + + +M D NG + F EF+ +
Sbjct: 9 KEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMM 68
Query: 68 KFLLK-------VQHAFSDLE-RGRGYLVPDNVYEALVKIGFSLDSPAF 108
+K ++ AF + G GY+ + +AL+ +G L F
Sbjct: 69 GRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEF 117
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFL 70
F + DS+ +G I +L F V +D Q+++ D + +G + FEEFVE+ + +
Sbjct: 129 FQQFDSDGSGKITNEELGRLFGVTEVDDE--TWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Query: 71 LKVQ 74
V+
Sbjct: 187 CDVK 190
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1 MENTAVLREWFDRVDSEKTGSIAAAQLKHAF---------AVGNLDFSL--SVVQQMIRM 49
+E T L + F ++D+ G + +L + V +LD S + V +++
Sbjct: 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 95
Query: 50 YDFDRNGTMSFEEFV 64
DFDRNG + + EFV
Sbjct: 96 VDFDRNGYIEYSEFV 110
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 62 EFVEL 66
EF+ +
Sbjct: 68 EFLTM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSV--VQQMIRMYDFDRNGTMSFEEFV 64
LRE F D E G I+ ++ A LD +LS + MI D D +GT+ FEEF+
Sbjct: 93 LREAFRLYDKEGNGYISTDVMREILA--ELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 17 EKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF-----------VE 65
E +G ++ Q+ V + + S ++Q+I +D NG + F+ F V
Sbjct: 26 EGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVN 85
Query: 66 LNKFLLKVQHAFSDLER-GRGYLVPDNVYEALVKIGFSLDS 105
+ +++ AF ++ G GY+ D + E L ++ +L S
Sbjct: 86 PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 8 REWFDRV----DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
RE +R D + +G I+ +L F+ + + ++ +I D +++G + F EF
Sbjct: 416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
Query: 64 VEL 66
VE+
Sbjct: 476 VEM 478
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + GSI++++L L S + V ++ D D N + F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 62 EFVELNKFLLKVQHAFSDL--------ERGRGYLVPDNVYEALVKIGFSL 103
EF+ L LK + +L + G G + + L IG L
Sbjct: 67 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 116
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E + +E F D + G I +L + + + +Q MI D D NGT+ F
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 62 EFVEL 66
EF+ L
Sbjct: 67 EFLNL 71
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSV--VQQMIRMYDFDRNGTMSFEEFV 64
LRE F D E G I+ ++ A LD +LS + MI D D +GT+ FEEF+
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILA--ELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+E F D + G I +L + + + +Q MI D D NGT+ F+EF+ L
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
D E G++ A+++H + V+Q++ ++ D NG +++EE V +
Sbjct: 96 DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELVRM 146
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
D E G++ A+++H + V+Q++ ++ D NG +++EE V +
Sbjct: 94 DKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELVRM 144
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 8 REWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
+E F D + G I +L + + + +Q MI D D NGT+ F+EF+ L
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + GSI++++L L S + V ++ D D N + F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 62 EFVELNKFLLKVQHAFSDL--------ERGRGYLVPDNVYEALVKIGFSL 103
EF+ L LK + +L + G G + + L IG L
Sbjct: 67 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 116
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + GSI++++L L S + V ++ D D N + F
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67
Query: 62 EFVELNKFLLKVQHAFSDL--------ERGRGYLVPDNVYEALVKIGFSL 103
EF+ L LK + +L + G G + + L IG L
Sbjct: 68 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
D + G I +L+ A A + MIR D D++G +++EEF +
Sbjct: 16 DQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF 63
L+E F +D EK G I L+ + + ++ MI D D +GT+ +EEF
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
>pdb|3MQZ|A Chain A, Crystal Structure Of Conserved Protein Duf1054 From Pink
Subaerial Biofilm Microbial Leptospirillum Sp. Group Ii
Uba
Length = 215
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 9 EWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDF 52
EW RV E+ GS+ +A L F V D SL+ + + IR +D
Sbjct: 164 EWDPRVFGERLGSLKSASLDIGFRV-TFDTSLAGIVKTIRTFDL 206
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + G+I +L + + + +Q MI D D +GT+ F
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 66
Query: 62 EFVEL 66
EF+ +
Sbjct: 67 EFLTM 71
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A +E F D + GSI++++L L S + V ++ D D N + F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 62 EFVELNKFLLK 72
EF+ L LK
Sbjct: 67 EFLALMSRQLK 77
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
L + F ++D + +GS++ + ++ L + +VQ++I ++D D NG + F+EF+E
Sbjct: 22 LGKRFKKLDLDNSGSLSVEEF---MSLPELQQN-PLVQRVIDIFDTDGNGEVDFKEFIE 76
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
L + F ++D + +GS++ + ++ L + +VQ++I ++D D NG + F+EF+E
Sbjct: 23 LGKRFKKLDLDNSGSLSVEEF---MSLPELQQN-PLVQRVIDIFDTDGNGEVDFKEFIE 77
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAF--------AVGNLDFSLSVVQQMIRMYDFD 53
E T L + F +D G + +L + AV +L S V ++ DFD
Sbjct: 343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFD 402
Query: 54 RNGTMSFEEFVEL---NKFLL---KVQHAFSDLER-GRGYLVPDNVYEALVKIGFSLDSP 106
RNG + + EFV + K LL K++ AF ++ G G + D + F LD
Sbjct: 403 RNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV-----FGLDHL 457
Query: 107 AFYTVCEVCTSI 118
T E+ + I
Sbjct: 458 ESKTWKEMISGI 469
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L F + D + G I+ +L F + +L+ ++MI D + +G + FEEF ++
Sbjct: 428 LESAFQKFDQDGNGKISVDELASVFGLDHLESK--TWKEMISGIDSNNDGDVDFEEFCKM 485
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
L + F ++D + +GS++ + ++ L + +VQ++I ++D D NG + F+EF+E
Sbjct: 9 LGKRFKKLDLDNSGSLSVEEF---MSLPELQQN-PLVQRVIDIFDTDGNGEVDFKEFIE 63
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF-VELNKF 69
+D +D++K G ++ + K D + DF++NG +S +EF V +N F
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDF 167
Query: 70 LLKVQH 75
L ++
Sbjct: 168 LFGLEE 173
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
L + F ++D + +GS++ + ++ L + +VQ++I ++D D NG + F+EF+E
Sbjct: 8 LGKRFKKLDLDNSGSLSVEEF---MSLPELQQN-PLVQRVIDIFDTDGNGEVDFKEFIE 62
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 11 FDRVDSEKTGSIAAAQLKHAF-AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL--- 66
F R D+ G I++++L A +G++ + V++M+ D D +G +SF+EF +
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSV--TPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74
Query: 67 NKFLLK 72
N+ L+K
Sbjct: 75 NRGLVK 80
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 10 WFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEF-VELNK 68
+D +D++K G ++ + K D + DF++NG +S +EF V +N
Sbjct: 107 MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVND 166
Query: 69 FLLKVQH 75
FL ++
Sbjct: 167 FLFGLEE 173
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 5 AVLREWFDRVDSEKTGSIAAAQLK------HAFAVGNLDFSLSVVQQMIRMYDFDRNGTM 58
A L F ++D+ G + A +L+ A+ + D ++I+M D + +G +
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 59 SFEEFVELNKFLL 71
S EEF+ N LL
Sbjct: 67 SKEEFLNANAELL 79
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L F + D + G I+ +L F + +L+ ++MI D + +G + FEEF ++
Sbjct: 145 LESAFQKFDQDGNGKISVDELASVFGLDHLESK--TWKEMISGIDSNNDGDVDFEEFCKM 202
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 1 MENTAVLREWFDRVDSEKTGSIAAAQLKHAF--------AVGNLDFSLSVVQQMIRMYDF 52
E T L + F +D G + +L + AV +L S V ++ DF
Sbjct: 59 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADF 118
Query: 53 DRNGTMSFEEFVEL---NKFLL---KVQHAFSDLER-GRGYLVPDNVYEALVKIGFSLDS 105
DRNG + + EFV + K LL K++ AF ++ G G + D + F LD
Sbjct: 119 DRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV-----FGLDH 173
Query: 106 PAFYTVCEVCTSI 118
T E+ + I
Sbjct: 174 LESKTWKEMISGI 186
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 38 FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEAL 96
FS+ + M+ M D D +G + +EF L + K Q + +++ R G + + +AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 97 VKIGFSL 103
+ GF L
Sbjct: 632 EEAGFKL 638
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 38 FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEAL 96
FS+ + M+ M D D +G + +EF L + K Q + +++ R G + + +AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 97 VKIGFSL 103
+ GF L
Sbjct: 632 EEAGFKL 638
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 28.9 bits (63), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 38 FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEAL 96
FS+ + M+ M D D +G + +EF L + K Q + +++ R G + + +AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 97 VKIGFSL 103
+ GF L
Sbjct: 632 EEAGFKL 638
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D E TG ++ L++ + + V ++++ + D NG + +++F+E
Sbjct: 15 DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 1 MENTAVLREWFDRVDSEKTGSIAAAQLKHAFAV--------GNLDFSLSVVQQMIRMYDF 52
+E L + F ++D G + +L + V G L V +++ DF
Sbjct: 351 LEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDF 410
Query: 53 DRNGTMSFEEFVEL 66
D+NG + + EF+ +
Sbjct: 411 DKNGYIEYSEFISV 424
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 38 FSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGR-GYLVPDNVYEAL 96
FS+ + M+ M D D +G + +EF L + K Q + +++ R G + + +AL
Sbjct: 571 FSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 630
Query: 97 VKIGFSL 103
+ GF +
Sbjct: 631 EEAGFKM 637
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF-AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
+RE F D + G I+ +L A ++G + + + + +I+ D D +G + FEEFV
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL-EVIIQRLDMDGDGQVDFEEFVT 96
Query: 66 L 66
L
Sbjct: 97 L 97
>pdb|1R3N|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|E Chain E, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|F Chain F, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|G Chain G, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
pdb|1R3N|H Chain H, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri
Length = 462
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 89 PDNVYEALVKIGFSLDSPAFYTVCEV 114
P++VY++L IG+ D+PA Y E+
Sbjct: 193 PESVYDSLKNIGYIGDTPASYKENEI 218
>pdb|2V8G|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The Product Beta-
Alanine
pdb|2V8G|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The Product Beta-
Alanine
pdb|2V8G|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The Product Beta-
Alanine
pdb|2V8G|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The Product Beta-
Alanine
pdb|2VL1|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The A Gly-Gly
Peptide
pdb|2VL1|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The A Gly-Gly
Peptide
pdb|2VL1|C Chain C, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The A Gly-Gly
Peptide
pdb|2VL1|D Chain D, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri In Complex With The A Gly-Gly
Peptide
Length = 474
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 89 PDNVYEALVKIGFSLDSPAFYTVCEV 114
P++VY++L IG+ D+PA Y E+
Sbjct: 193 PESVYDSLKNIGYIGDTPASYKENEI 218
>pdb|2V8D|A Chain A, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
pdb|2V8D|B Chain B, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
pdb|2V8H|A Chain A, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri In Complex With Its
Substrate N-Carbamyl-Beta-Alanine
pdb|2V8H|B Chain B, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri In Complex With Its
Substrate N-Carbamyl-Beta-Alanine
pdb|2V8H|C Chain C, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri In Complex With Its
Substrate N-Carbamyl-Beta-Alanine
pdb|2V8H|D Chain D, Crystal Structure Of Mutant E159a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri In Complex With Its
Substrate N-Carbamyl-Beta-Alanine
Length = 474
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 89 PDNVYEALVKIGFSLDSPAFYTVCEV 114
P++VY++L IG+ D+PA Y E+
Sbjct: 193 PESVYDSLKNIGYIGDTPASYKENEI 218
>pdb|2V8V|A Chain A, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
pdb|2V8V|B Chain B, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
pdb|2V8V|C Chain C, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
pdb|2V8V|D Chain D, Crystal Structure Of Mutant R322a Of Beta-Alanine Synthase
From Saccharomyces Kluyveri
Length = 474
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 89 PDNVYEALVKIGFSLDSPAFYTVCEV 114
P++VY++L IG+ D+PA Y E+
Sbjct: 193 PESVYDSLKNIGYIGDTPASYKENEI 218
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D E TG ++ L++ + + V ++++ + D NG + +++F+E
Sbjct: 93 DKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 143
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF-AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ F R D+ G I+ ++L A +G+ S VQ+M+ D D +G + F EF+
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGST--SADEVQRMMAEIDTDGDGFIDFNEFI 60
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAF-AVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ F R D+ G I+ ++L A +G+ S VQ+M+ D D +G + F EF+
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGST--SADEVQRMMAEIDTDGDGFIDFNEFI 61
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFVELNKFLLK-------VQHAFSDLER-GRGYLVPDNVYE 94
+Q MI D D NGT+ F EF+ + +K ++ AF ++ G GY+ +
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 62
Query: 95 ALVKIG 100
+ +G
Sbjct: 63 VMTNLG 68
>pdb|1R43|A Chain A, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri (Selenomethionine Substituted
Protein)
pdb|1R43|B Chain B, Crystal Structure Of Beta-Alanine Synthase From
Saccharomyces Kluyveri (Selenomethionine Substituted
Protein)
Length = 463
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 89 PDNVYEALVKIGFSLDSPAFYTVCEV 114
P++VY++L IG+ D+PA Y E+
Sbjct: 194 PESVYDSLKNIGYIGDTPASYKENEI 219
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKH---AFAVGNLDFSLSVVQQMIRMYDFDRNGTM 58
++++ L+E F +D++++G I +LK+ F G + S + + D D +G +
Sbjct: 38 KSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKI 97
Query: 59 SFEEFVEL 66
EEF E+
Sbjct: 98 GAEEFQEM 105
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 7 LREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVEL 66
L +F ++D + + S+ A + + A L + + + R +D + +GT+ EEF+
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 67 NKFLLK------VQHAFSDLER-GRGYLVPDNV 92
+ + + AF+ L+R G G + D++
Sbjct: 99 LRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A + FD D++ G I+ +L + + + + +I D D +GT+ FE
Sbjct: 6 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
Query: 62 EFV 64
EF+
Sbjct: 66 EFL 68
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3BHW|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Magnetospirillum Magneticum
pdb|3BHW|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Magnetospirillum Magneticum
Length = 209
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 24 AAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERG 83
AA +KH+ +G DF VV+ RM+ D M +++++E + + + D
Sbjct: 92 AAAIKHSTLLG--DFLDLVVRDQFRMFRPDLPRKM-WDQYLEQCRNRDPLMPVWQDSTAN 148
Query: 84 RGYLVPDNVYEALVKIGFSLDSPAF 108
+ + D VY LV++G+ DS +
Sbjct: 149 K---LADCVYRILVEVGYITDSKTY 170
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D E G++ A+L+H A + V+++++ + D NG +++E FV+
Sbjct: 91 DKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 140
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 6 VLREWFDRV----DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
++REW D V D + +G+I + K + + S + R D D +G + +
Sbjct: 110 LIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVD 169
Query: 62 EFV 64
E
Sbjct: 170 EMT 172
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 6 VLREWFDRV----DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
++REW D V D + +G+I + K + + S + R D D +G + +
Sbjct: 110 LIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVD 169
Query: 62 EFV 64
E
Sbjct: 170 EMT 172
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 20 GSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 18 KTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
+ GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 6 VLREWFDRV----DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
++REW D V D + +G+I + K + + S + R D D +G + +
Sbjct: 110 LIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVD 169
Query: 62 EFV 64
E
Sbjct: 170 EMT 172
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 20 GSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFL 70
F + + G I + K F L + + + + DFD++G ++ +EF F
Sbjct: 15 FKTIQPDLNGFIPGSAAKEFFTKSKL--PILELSHIWELSDFDKDGALTLDEFCA--AFH 70
Query: 71 LKVQHAFSDLERGRGYLVPDNVYEALV 97
L V R GY +P+ + E+L+
Sbjct: 71 LVVA-------RKNGYDLPEKLPESLM 90
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 20 GSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
GSI+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFV 64
V Q++ DFD+NG + + EFV
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFV 405
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D E G++ A+L+H A + V+++++ + D NG +++E FV+
Sbjct: 93 DKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 142
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNK 68
D ++TG I+ LK + + +Q+MI D D +G +S +EF+ + K
Sbjct: 31 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 84
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
D E G++ A+L+H A + V+++++ + D NG +++E FV+
Sbjct: 95 DKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFVK 144
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 15 DSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNK 68
D ++TG I+ LK + + +Q+MI D D +G +S +EF+ + K
Sbjct: 21 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 74
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 48 RMYDFDRNGTMSFEEFVELNKFLLKVQHAFS---DLERGRGYLVPDNVYEAL 96
++YD DRNG + +E +++ + + K++ A S + E+ L P+ V + +
Sbjct: 102 KIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRI 153
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 9 EWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
E F D E G + A+L+H + V+ ++ ++ D NG +++E F++
Sbjct: 91 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLK 146
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFV------ELNKFLLKVQHAFS--DLERGRGYLVPDNVYE 94
Q + R +D + +GT+ F+E+V K K++ AFS D++ G G + + V E
Sbjct: 65 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVD-GNGTISKNEVLE 123
Query: 95 ALVKIGFSLDSP 106
+ I F + SP
Sbjct: 124 IVTAI-FKMISP 134
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFV------ELNKFLLKVQHAFS--DLERGRGYLVPDNVYE 94
Q + R +D + +GT+ F+E+V K K++ AFS D++ G G + + V E
Sbjct: 65 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVD-GNGTISKNEVLE 123
Query: 95 ALVKIGFSLDSP 106
+ I F + SP
Sbjct: 124 IVTAI-FKMISP 134
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFV------ELNKFLLKVQHAFS--DLERGRGYLVPDNVYE 94
Q + R +D + +GT+ F+E+V K K++ AFS D++ G G + + V E
Sbjct: 65 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVD-GNGTISKNEVLE 123
Query: 95 ALVKIGFSLDSP 106
+ I F + SP
Sbjct: 124 IVTAI-FKMISP 134
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 43 VQQMIRMYDFDRNGTMSFEEFV------ELNKFLLKVQHAFS--DLERGRGYLVPDNVYE 94
Q + R +D + +GT+ F+E+V K K++ AFS D++ G G + + V E
Sbjct: 66 AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVD-GNGTISKNEVLE 124
Query: 95 ALVKIGFSLDSP 106
+ I F + SP
Sbjct: 125 IVTAI-FKMISP 135
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 48 RMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLE 81
++YD DR+G +S E +++ + ++ VQ LE
Sbjct: 121 QLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLE 154
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Query: 33 VGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVELNKFLLKVQHAFSDLERGRGYL----V 88
VGN L + M YD D E+F LN+ +L+++ AF E+G L +
Sbjct: 123 VGNF---LRRISYMTGSYDRD-------EDFARLNERILRMEEAFQGPEKGGNRLFYLAL 172
Query: 89 PDNVYEALVK 98
P +V+ + +
Sbjct: 173 PPSVFVGVCR 182
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 5 AVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
A + FD D++ G I+ +L + + + + +I D D +GT+ FEEF+
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 76
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQL----KHAFAVGNLDFSL-------SVVQQMIRMY 50
+ T L F ++D G + A+L K + D S+ V Q++
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 51 DFDRNGTMSFEEFV 64
DFD+NG + + EFV
Sbjct: 392 DFDKNGYIEYSEFV 405
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 5 AVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
A + FD D++ G I+ +L + + + + +I D D +GT+ FEEF+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A + FD D++ G I+ +L + + + + +I D D +GT+ FE
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 62 EFV 64
EF+
Sbjct: 77 EFL 79
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 5 AVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
A + FD D++ G I+ +L + + + + +I D D +GT+ FEEF+
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A + FD D++ G I+ +L + + + + +I D D +GT+ FE
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 62 EFV 64
EF+
Sbjct: 77 EFL 79
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A + FD D++ G I+ +L + + + + +I D D +GT+ FE
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 62 EFV 64
EF+
Sbjct: 77 EFL 79
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 41 SVVQQMIRMYDFDRNGTMSFEEFVEL 66
V+ +M++ D D +G + F+EF+ L
Sbjct: 56 GVLDRMMKKLDLDSDGQLDFQEFLNL 81
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQL----KHAFAVGNLDFSL-------SVVQQMIRMY 50
+ T L F ++D G + A+L K + D S+ V Q++
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 51 DFDRNGTMSFEEFV 64
DFD+NG + + EFV
Sbjct: 416 DFDKNGYIEYSEFV 429
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQL----KHAFAVGNLDFSL-------SVVQQMIRMY 50
+ T L F ++D G + A+L K + D S+ V Q++
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 51 DFDRNGTMSFEEFV 64
DFD+NG + + EFV
Sbjct: 415 DFDKNGYIEYSEFV 428
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 14 VDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFV 64
V + G I+ +L + + + +Q+MI D D +GT+ F+EF+
Sbjct: 28 VQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 6 VLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEEFVE 65
V+R F D E +G I L+ F+ V +M R D+ G ++ EF
Sbjct: 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTR 136
Query: 66 LNKFLLK 72
+ K K
Sbjct: 137 ILKHGAK 143
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 2 ENTAVLREWFDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
E A + FD D++ G I+ +L + + + + +I D D +GT+ FE
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
Query: 62 EFV 64
EF+
Sbjct: 77 EFL 79
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 6 VLREW----FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFE 61
++R W FD VD ++ G+I + K + S ++ R+ D D +G + +
Sbjct: 106 LIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVD 165
Query: 62 EFV 64
E
Sbjct: 166 EMT 168
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 25.4 bits (54), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 11 FDRVDSEKTGSIAAAQLKHAFAVGNLDFSLSVVQQMIRMYDFDRNGTMSFEE 62
FD VD ++ G+I + K + S ++ R+ D D +G + +E
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,649,021
Number of Sequences: 62578
Number of extensions: 132670
Number of successful extensions: 809
Number of sequences better than 100.0: 224
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 494
Number of HSP's gapped (non-prelim): 322
length of query: 129
length of database: 14,973,337
effective HSP length: 88
effective length of query: 41
effective length of database: 9,466,473
effective search space: 388125393
effective search space used: 388125393
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)