BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033000
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O13801|YE04_SCHPO Uncharacterized RNA-binding protein C17H9.04c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC17H9.04c PE=1 SV=1
Length = 604
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRT---EVLAGDWYCTAMNCGAH 62
GDW C C NF++R +C RC +P G VS + T + G+ Y +
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFP--GPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIA 402
Query: 63 NYASRPNCYRCGAAKTDYACAN--------MMAYGTDGSVPPGWKSGDWICNRMGCGVHN 114
NY + ++D N + G+VP +++GDW C GCG HN
Sbjct: 403 NYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVP--FRAGDWKCGSEGCGYHN 460
Query: 115 YASRMVCYKCKTPR 128
+A + C +C R
Sbjct: 461 FAKNVCCLRCGASR 474
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYG 89
AGDW C + CG HN+A C RCGA++ A A G
Sbjct: 446 AGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASG 486
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYL 41
GDW+C C NF++R C RC P Y + L
Sbjct: 562 GDWLCE-CGFTNFRRRSNCLRCNAPHYSNMQIPASL 596
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Query: 50 GDWYCTAMNCGAHNYASRPNCYRCGA 75
GDW C CG N+ R NC RC A
Sbjct: 562 GDWLC---ECGFTNFRRRSNCLRCNA 584
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 23/143 (16%)
Query: 5 GGDWMCAA--CQHQNFKKREACQRCGYPKY---------GGPDVSTYLCNRTEVLAGDWY 53
GDW C + C + NF K C RCG + GP +Y N +
Sbjct: 446 AGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPVMS 505
Query: 54 CTAMNCGAHNYAS------RPNCYRCGAAKTDYACANMMAYGTDGSVP-PGWKS--GDWI 104
+ N + Y+ N + + + +G V P + GDW+
Sbjct: 506 TSPPNHSVYPYSQLSINSVTANHGQNFGGQNGGNVSRFDDHGRFKEVSRPSVTTDQGDWL 565
Query: 105 CNRMGCGVHNYASRMVCYKCKTP 127
C CG N+ R C +C P
Sbjct: 566 CE---CGFTNFRRRSNCLRCNAP 585
>sp|Q5ZLX5|ZRAB2_CHICK Zinc finger Ran-binding domain-containing protein 2 OS=Gallus
gallus GN=ZRANB2 PE=2 SV=1
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C CG N+A R C C TP+
Sbjct: 67 NDWQCK--TCGNVNWARRSECNMCNTPK 92
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 1 MSLPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL-- 48
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L
Sbjct: 6 FRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFS 65
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAK 77
A DW C CG N+A R C C K
Sbjct: 66 ANDWQCKT--CGNVNWARRSECNMCNTPK 92
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERT 100
>sp|Q19QU3|ZRAB2_PIG Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa
GN=ZRANB2 PE=2 SV=1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C C N+A R C C TP+
Sbjct: 67 NDWQCK--TCSNVNWARRSECNMCNTPK 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 3 LPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL--AG 50
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L A
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSAN 67
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAK 77
DW C C N+A R C C K
Sbjct: 68 DWQCKT--CSNVNWARRSECNMCNTPK 92
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERT 100
>sp|O95218|ZRAB2_HUMAN Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens
GN=ZRANB2 PE=1 SV=2
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C C N+A R C C TP+
Sbjct: 67 NDWQCK--TCSNVNWARRSECNMCNTPK 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 3 LPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL--AG 50
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L A
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSAN 67
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAK 77
DW C C N+A R C C K
Sbjct: 68 DWQCKT--CSNVNWARRSECNMCNTPK 92
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERT 100
>sp|Q5R580|ZRAB2_PONAB Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii
GN=ZRANB2 PE=2 SV=1
Length = 320
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C C N+A R C C TP+
Sbjct: 67 NDWQCK--TCSNVNWARRSECNMCNTPK 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 3 LPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL--AG 50
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L A
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSAN 67
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAK 77
DW C C N+A R C C K
Sbjct: 68 DWQCKT--CSNVNWARRSECNMCNTPK 92
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERT 100
>sp|O35986|ZRAB2_RAT Zinc finger Ran-binding domain-containing protein 2 OS=Rattus
norvegicus GN=Zranb2 PE=2 SV=2
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C C N+A R C C TP+
Sbjct: 67 NDWQCK--TCSNVNWARRSECNMCNTPK 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 1 MSLPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL-- 48
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L
Sbjct: 6 FRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFS 65
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAK 77
A DW C C N+A R C C K
Sbjct: 66 ANDWQCKT--CSNVNWARRSECNMCNTPK 92
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERT 100
>sp|Q9R020|ZRAB2_MOUSE Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus
GN=Zranb2 PE=1 SV=2
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 47 VLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKS------ 100
V GDW C CG N+A R +C RCG KT A M A GT+ KS
Sbjct: 8 VSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKM-MKAGGTEIGKTLAEKSRGLFSA 66
Query: 101 GDWICNRMGCGVHNYASRMVCYKCKTPR 128
DW C C N+A R C C TP+
Sbjct: 67 NDWQCK--TCSNVNWARRSECNMCNTPK 92
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 1 MSLPGGDWMC--AACQHQNFKKREACQRCGYPKY--------GGPDVSTYLCNRTEVL-- 48
+ GDW+C C + NF +R +C RCG K GG ++ L ++ L
Sbjct: 6 FRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFS 65
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAK 77
A DW C C N+A R C C K
Sbjct: 66 ANDWQCKT--CSNVNWARRSECNMCNTPK 92
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
DW C C + N+ +R C C PKY + T
Sbjct: 64 FSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERT 100
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPK 31
DW+C C QNFK+RE C +CG PK
Sbjct: 139 DWLCNKCGVQNFKRREKCFKCGVPK 163
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 102 DWICNRMGCGVHNYASRMVCYKCKTPR 128
DW+CN+ CGV N+ R C+KC P+
Sbjct: 139 DWLCNK--CGVQNFKRREKCFKCGVPK 163
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 34 GPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
G VS + + + DW C CG N+ R C++CG K++
Sbjct: 122 GQKVSMHYSDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 165
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPK 31
DW+C C QNFK+RE C +CG PK
Sbjct: 216 DWLCNKCGVQNFKRREKCFKCGVPK 240
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 102 DWICNRMGCGVHNYASRMVCYKCKTPR 128
DW+CN+ CGV N+ R C+KC P+
Sbjct: 216 DWLCNK--CGVQNFKRREKCFKCGVPK 240
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 34 GPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
G VS + + + DW C CG N+ R C++CG K++
Sbjct: 199 GQKVSMHYSDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 242
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPK 31
DW+C C QNFK+RE C +CG PK
Sbjct: 216 DWLCNKCGVQNFKRREKCFKCGVPK 240
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 102 DWICNRMGCGVHNYASRMVCYKCKTPR 128
DW+CN+ CGV N+ R C+KC P+
Sbjct: 216 DWLCNK--CGVQNFKRREKCFKCGVPK 240
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 34 GPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
G VS + + + DW C CG N+ R C++CG K++
Sbjct: 199 GQKVSMHYSDPKPKINEDWLCN--KCGVQNFKRREKCFKCGVPKSE 242
>sp|P32770|NRP1_YEAST Asparagine-rich protein OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NRP1 PE=1 SV=2
Length = 719
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 19/38 (50%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVS 38
M GDW C+ C + NF K C RCG PK D S
Sbjct: 578 MPFRAGDWKCSTCTYHNFAKNVVCLRCGGPKSISGDAS 615
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVST 39
GDW C +C NF++R AC RC +P + T
Sbjct: 357 GDWNCPSCGFSNFQRRTACFRCSFPAPSNSQIHT 390
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 86 MAYGTDGSVPPGWKSGDWICNRMGCGVHNYASRMVCYKCKTPR 128
+ G GS P +++GDW C+ C HN+A +VC +C P+
Sbjct: 569 IGMGGCGSNMP-FRAGDWKCST--CTYHNFAKNVVCLRCGGPK 608
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAKT 78
AGDW C+ C HN+A C RCG K+
Sbjct: 582 AGDWKCST--CTYHNFAKNVVCLRCGGPKS 609
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 99 KSGDWICNRMGCGVHNYASRMVCYKCKTP 127
+ GDW C CG N+ R C++C P
Sbjct: 355 RPGDWNCP--SCGFSNFQRRTACFRCSFP 381
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 50 GDWYCTAMNCGAHNYASRPNCYRC 73
GDW C + CG N+ R C+RC
Sbjct: 357 GDWNCPS--CGFSNFQRRTACFRC 378
>sp|Q8S9K3|VAR3_ARATH Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana
GN=VAR3 PE=1 SV=2
Length = 758
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 24/90 (26%)
Query: 43 NRTEVLAGDWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGWKSG- 101
N E+ GDW C+ C N+A C++C A+ P +G
Sbjct: 271 NNVEMKRGDWICS--RCSGMNFARNVKCFQCDEAR-----------------PKRQLTGS 311
Query: 102 DWICNRMGCGVHNYASRMVCYK--CKTPRE 129
+W C + C +NY + C + CK PR+
Sbjct: 312 EWECPQ--CDFYNYGRNVACLRCDCKRPRD 339
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 23/86 (26%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYA 65
GDW+C+ C NF + C +C + + ++ +W C C +NY
Sbjct: 278 GDWICSRCSGMNFARNVKCFQCDEAR-----------PKRQLTGSEWECP--QCDFYNYG 324
Query: 66 SRPNCYRC----------GAAKTDYA 81
C RC +A +DY+
Sbjct: 325 RNVACLRCDCKRPRDSSLNSANSDYS 350
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 3 LPGGDWMCAACQHQNFKKREACQRC 27
L G +W C C N+ + AC RC
Sbjct: 308 LTGSEWECPQCDFYNYGRNVACLRC 332
>sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2
Length = 3224
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 55/156 (35%), Gaps = 38/156 (24%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYP----------------KYGGPDVSTYLCNRTEVL- 48
G W C+AC QN C C P K+G + S L + E +
Sbjct: 1481 GQWDCSACLVQNEGSSTKCAACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMF 1540
Query: 49 ---AGDWYCTAMNCGAHNYASRPNCYRCG-----AAKTDYACANMMAYGT-DGSVPP--G 97
G W C++ C N A+ C C + T +GT + S P G
Sbjct: 1541 AKKEGQWDCSS--CLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKSG 1598
Query: 98 W------KSGDWICNRMGCGVHNYASRMVCYKCKTP 127
+ K G W C+ C V N AS C C+ P
Sbjct: 1599 FEGMFTKKEGQWDCSV--CLVRNEASATKCIACQNP 1632
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 2 SLPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTY 40
++P GDW CA C Q ++ E QR G+PK G S++
Sbjct: 1698 AVPEGDWFCAVCLSQQVEE-EYTQRPGFPKRGQKRKSSF 1735
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPKY 32
DW+C C NF+KR C RCG K+
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKF 209
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGW----KSGDWICN 106
DW C C +N+ R C+RCGA K D ++ VPPG +S D+ C+
Sbjct: 184 DWLCN--KCCLNNFRKRLKCFRCGADKFD----------SEQEVPPGTTESVQSVDYYCD 231
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPKY 32
DW+C C NF+KR C RCG K+
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKF 209
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGW----KSGDWICN 106
DW C C +N+ R C+RCGA K D ++ VPPG +S D+ C+
Sbjct: 184 DWLCN--KCCLNNFRKRLKCFRCGADKFD----------SEQEVPPGTTESVQSVDYYCD 231
Query: 107 RM 108
+
Sbjct: 232 TI 233
>sp|Q8GZ43|YZR3_ARATH RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana
GN=At1g67325 PE=1 SV=1
Length = 288
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 7 DWMCAACQHQNFKKREAC--QRCGYPKYGGPD-VSTYLCNRTEVLAGDWYCTAMNCGAHN 63
DW C C + NF R C ++C PK G S+ ++ G W C NCG N
Sbjct: 197 DWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQNAPEGSWKCD--NCGNIN 254
Query: 64 YASRPNCYR--CGAAK 77
Y R C R CGA K
Sbjct: 255 YPFRSKCNRQNCGADK 270
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPKY 32
DW+C C NF+KR C RCG K+
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKF 209
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGW----KSGDWICN 106
DW C C +N+ R C+RCGA K D ++ VPPG +S D+ C+
Sbjct: 184 DWLCN--KCCLNNFRKRLKCFRCGADKFD----------SEQEVPPGTTESVQSVDYYCD 231
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 7 DWMCAACQHQNFKKREACQRCGYPKY 32
DW+C C NF+KR C RCG K+
Sbjct: 184 DWLCNKCCLNNFRKRLKCFRCGADKF 209
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 16/60 (26%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTDYACANMMAYGTDGSVPPGW----KSGDWICN 106
DW C C +N+ R C+RCGA K D ++ VPPG +S D+ C+
Sbjct: 184 DWLCN--KCCLNNFRKRLKCFRCGADKFD----------SEQEVPPGTTESAQSVDYYCD 231
>sp|Q92804|RBP56_HUMAN TATA-binding protein-associated factor 2N OS=Homo sapiens GN=TAF15
PE=1 SV=1
Length = 592
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 99 KSGDWICNRMGCGVHNYASRMVCYKCKTPR 128
KSGDW+C CG N+A R C +C PR
Sbjct: 354 KSGDWVCPNPSCGNMNFARRNSCNQCNEPR 383
>sp|Q01844|EWS_HUMAN RNA-binding protein EWS OS=Homo sapiens GN=EWSR1 PE=1 SV=1
Length = 656
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 99 KSGDWICNRMGCGVHNYASRMVCYKCKTPR 128
++GDW C GCG N+A R C +CK P+
Sbjct: 518 RAGDWQCPNPGCGNQNFAWRTECNQCKAPK 547
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAK 77
AGDW C CG N+A R C +C A K
Sbjct: 519 AGDWQCPNPGCGNQNFAWRTECNQCKAPK 547
>sp|Q61545|EWS_MOUSE RNA-binding protein EWS OS=Mus musculus GN=Ewsr1 PE=1 SV=2
Length = 655
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 99 KSGDWICNRMGCGVHNYASRMVCYKCKTPR 128
++GDW C GCG N+A R C +CK P+
Sbjct: 517 RAGDWQCPNPGCGNQNFAWRTECNQCKAPK 546
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 49 AGDWYCTAMNCGAHNYASRPNCYRCGAAK 77
AGDW C CG N+A R C +C A K
Sbjct: 518 AGDWQCPNPGCGNQNFAWRTECNQCKAPK 546
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 2 SLPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRTE 46
++P GDW C C Q + E Q+ G+PK G S Y N +E
Sbjct: 1712 AVPEGDWFCTVCLAQQVEG-EFTQKPGFPKRGQKRKSGYSLNFSE 1755
>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=2
Length = 3053
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 43/135 (31%), Gaps = 30/135 (22%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYA 65
G W C+ C +N + + C C P G +W+C+ C N A
Sbjct: 1471 GQWECSVCLVRNERSAKKCVACENP---GKQFK------------EWHCSL--CSVKNEA 1513
Query: 66 SRPNCYRCGAAKTD--YACANMMAYGTDGSVPP---------GWKSGDWICNRMGCGVHN 114
C C T +GT P K G W C+ C V N
Sbjct: 1514 HAIKCVACNNPVTPSLSTAPPSFKFGTSEMSKPFRIGFEGMFAKKEGQWDCSL--CFVRN 1571
Query: 115 YASRMVCYKCKTPRE 129
AS C C+ P +
Sbjct: 1572 EASATHCIACQYPNK 1586
>sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1
Length = 1095
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYA 65
G+W CA C N + C C P++ PD+ L R V W C C N+
Sbjct: 5 GEWSCARCTFLNPAGQRQCSICEAPRH-KPDLDQIL--RLSVEEQKWPCA--RCTFRNFL 59
Query: 66 SRPNCYRCG 74
+ C CG
Sbjct: 60 GKEACEVCG 68
Score = 32.3 bits (72), Expect = 0.83, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGY---PKYGGP 35
+S+ W CA C +NF +EAC+ CG+ P G P
Sbjct: 41 LSVEEQKWPCARCTFRNFLGKEACEVCGFTPEPVPGAP 78
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
DW C CG +N+ R C+RCGAAK +
Sbjct: 189 DWLCN--KCGLYNFRRRLKCFRCGAAKAE 215
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 96 PGWKSGDWICNRMGCGVHNYASRMVCYKC 124
P K DW+CN+ CG++N+ R+ C++C
Sbjct: 183 PRPKFEDWLCNK--CGLYNFRRRLKCFRC 209
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
DW C CG +N+ R C+RCGAAK +
Sbjct: 188 DWLCN--KCGLYNFRRRLKCFRCGAAKAE 214
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 96 PGWKSGDWICNRMGCGVHNYASRMVCYKC 124
P K DW+CN+ CG++N+ R+ C++C
Sbjct: 182 PRPKFEDWLCNK--CGLYNFRRRLKCFRC 208
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 51 DWYCTAMNCGAHNYASRPNCYRCGAAKTD 79
DW C CG +N+ R C+RCGAAK +
Sbjct: 188 DWLCN--KCGLYNFRRRLKCFRCGAAKAE 214
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Query: 96 PGWKSGDWICNRMGCGVHNYASRMVCYKC 124
P K DW+CN+ CG++N+ R+ C++C
Sbjct: 182 PRPKFEDWLCNK--CGLYNFRRRLKCFRC 208
>sp|O75808|CAN15_HUMAN Calpain-15 OS=Homo sapiens GN=SOLH PE=2 SV=1
Length = 1086
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYPKYGGP 35
+S+ W CA C +NF +EAC+ CG+ P
Sbjct: 41 LSVEEQKWPCARCTFRNFLGKEACEVCGFTPEPAP 75
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPKYGGPDVSTYLCNRTEVLAGDWYCTAMNCGAHNYA 65
G+W C C N + C C P++ PD++ L R V W C C N+
Sbjct: 5 GEWSCVRCTFLNPAGQRQCSICEAPRH-KPDLNHIL--RLSVEEQKWPCA--RCTFRNFL 59
Query: 66 SRPNCYRCG 74
+ C CG
Sbjct: 60 GKEACEVCG 68
>sp|Q27294|CAZ_DROME RNA-binding protein cabeza OS=Drosophila melanogaster GN=caz PE=2
SV=2
Length = 399
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 6 GDWMCAACQHQNFKKREACQRCGYPK 31
GDW C +C + NF R C RC PK
Sbjct: 277 GDWKCNSCNNTNFAWRNECNRCKTPK 302
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 99 KSGDWICNRMGCGVHNYASRMVCYKCKTPR 128
+ GDW CN C N+A R C +CKTP+
Sbjct: 275 RDGDWKCN--SCNNTNFAWRNECNRCKTPK 302
>sp|P87143|YDMD_SCHPO Uncharacterized RNA-binding protein C57A7.13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.13 PE=4 SV=1
Length = 565
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 103 WICNRMGCGVHNYASRMVCYKCKTPR 128
W C C + NY+ R C+KC+ PR
Sbjct: 159 WCCQN--CDILNYSYRESCFKCRVPR 182
>sp|Q9BXU3|TX13A_HUMAN Testis-expressed sequence 13A protein OS=Homo sapiens GN=TEX13A
PE=2 SV=1
Length = 409
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 6 GDWMCAACQHQNFKKREACQRCG 28
GDW C C NF +R+ C CG
Sbjct: 378 GDWDCPWCNAVNFSRRDTCFDCG 400
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 2 SLPGGDWMCAACQHQNFKKREA 23
++P G W+C CQ Q KK EA
Sbjct: 501 TIPKGMWICPRCQDQMLKKEEA 522
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 2 SLPGGDWMCAACQHQNFKKREA 23
++P G W+C CQ Q KK EA
Sbjct: 521 TIPKGMWICPRCQDQMLKKEEA 542
>sp|Q6NUB7|ZRN1B_XENLA Ubiquitin thioesterase zranb1-B OS=Xenopus laevis GN=zranb1-b PE=2
SV=1
Length = 701
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYP 30
+++ G W C+AC ++N K + C C +P
Sbjct: 141 LNIKGQHWTCSACTYENCAKAKKCVVCDHP 170
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYPKYGGPDV------STYLCNRTEVLAGDWYC 54
+S PGG+W+C C ++ + E C +YG P V S Y + E L C
Sbjct: 1028 LSFPGGEWVCTLC--RSLTQPEMEYDCENARYGHPGVRVLPGLSMYDQKKCEKLVLSLCC 1085
Query: 55 TAMNCGAHNYAS 66
+++ H S
Sbjct: 1086 NSLSLPFHEPVS 1097
>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2
SV=1
Length = 701
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYP 30
+++ G W C+AC ++N K + C C +P
Sbjct: 141 LNIKGQHWTCSACTYENCAKAKKCVVCDHP 170
>sp|B1H2Q2|ZRAN1_XENTR Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis GN=zranb1 PE=2
SV=1
Length = 701
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 1 MSLPGGDWMCAACQHQNFKKREACQRCGYP 30
+++ G W C+AC ++N K + C C +P
Sbjct: 141 LNIKGQHWTCSACTYENCAKAKKCVVCDHP 170
>sp|Q95KG7|MANS1_MACFA MANSC domain-containing protein 1 OS=Macaca fascicularis
GN=MANSC1 PE=2 SV=1
Length = 431
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 42 CNRTEVLAGDWYCTAMNCGAHNYASRPNCY 71
C T++++GD C M A RPNCY
Sbjct: 67 CCSTKIISGDKACNFMIFDTRKIARRPNCY 96
>sp|A0JMQ9|ZRN1B_DANRE Ubiquitin thioesterase zranb1-B OS=Danio rerio GN=zranb1b PE=2 SV=1
Length = 716
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 8 WMCAACQHQNFKKREACQRCGYPKYGG 34
W C+AC ++N+ K C C +PK G
Sbjct: 156 WPCSACTYENWPKSLRCVVCDHPKPSG 182
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 1 MSLPGGDWMCAACQHQNFKKRE-ACQRCGYPKYG---GPDVSTYLCNRTEVLAGDWYCTA 56
+S PGG+W+C C+ + E C+ Y + G P +S Y + E L C
Sbjct: 1002 LSFPGGEWVCTLCRSLTQPEMEYDCENACYNQPGMRASPGLSMYDQKKCEKLVLSLCCNN 1061
Query: 57 MNCGAHNYAS 66
++ H S
Sbjct: 1062 LSLPFHEPVS 1071
>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1
Length = 708
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 8 WMCAACQHQNFKKREACQRCGYPK 31
W C+ C ++N+ K + C C +P+
Sbjct: 153 WTCSVCTYENWAKAKKCVVCDHPR 176
>sp|B9G2A8|BIG_ORYSJ Auxin transport protein BIG OS=Oryza sativa subsp. japonica
GN=Os09g0247700 PE=2 SV=1
Length = 4965
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 8 WMCAACQHQNFKKREA--CQRCGYPKYG 33
+ C C++ N++ ++ C CGY KYG
Sbjct: 3341 YQCRQCRNINYENLDSFLCNECGYSKYG 3368
>sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2
Length = 5098
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 8 WMCAACQHQNFKKREA--CQRCGYPKYG 33
+ C C++ N++ ++ C CGY KYG
Sbjct: 3486 YQCRQCRNINYENLDSFLCNECGYSKYG 3513
>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2
Length = 708
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 8 WMCAACQHQNFKKREACQRCGYPK 31
W C+ C ++N+ K + C C +P+
Sbjct: 153 WTCSVCTYENWAKAKRCVVCDHPR 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.504
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,084,652
Number of Sequences: 539616
Number of extensions: 2175495
Number of successful extensions: 3621
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3450
Number of HSP's gapped (non-prelim): 175
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)