BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033006
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FG36|TRL31_ARATH Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC1 PE=2 SV=3
Length = 210
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 89/133 (66%), Gaps = 12/133 (9%)
Query: 1 MTALAAKSSILYQELHRREGKQQFQQPWSSGSSSCLLLQKNSAFFWVDTASRSKSAR--- 57
M ALA+ +L ++ H G ++ +Q W S L L+K F V S K R
Sbjct: 26 MAALASNPQMLTRQAH---GNKK-EQLWRKES---LNLEKKCGFC-VSVYSNEKLGRSHM 77
Query: 58 -RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLK 116
++ R++A W ++++PT++E+EPIN+ + LD +L A++LSQPI+I+WMASWCRKCIYLK
Sbjct: 78 EKEWRLKAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLK 137
Query: 117 PKLEKLAAEFDTK 129
PKLEKLAAE++ +
Sbjct: 138 PKLEKLAAEYNNR 150
>sp|Q8VZT6|TRL32_ARATH Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC2 PE=2 SV=1
Length = 192
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 72 PTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
P SVEL PI H DQ++ AQ+L + ++I WMA+WCRKCIYLKPKLEKLAAEF
Sbjct: 73 PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEF 127
>sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0774100 PE=2 SV=2
Length = 193
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL 119
+R EA + D+S+P VE+E I+ + LD L + E QPI+IDWMASWCRKCIYLKP+L
Sbjct: 67 LRAEAYFWDVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRL 124
Query: 120 EKLAAEF 126
EK+A EF
Sbjct: 125 EKIAGEF 131
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
P+ + D LDQ L+ A++ + ++ID+ A WC C + PKL++LA E+
Sbjct: 4 PVRNKDDLDQQLILAED--KLVVIDFYADWCGPCKIIAPKLDELAHEY 49
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
++ D D + +A+E + ++ID+ ASWC C ++ P + A +F
Sbjct: 12 HNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF 57
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
++ D D + +A+E + ++ID+ ASWC C ++ P + A +F
Sbjct: 12 HNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF 57
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
++ I +S+ +L E +QP+L++++A+WC C + P +E L+ E+ K
Sbjct: 71 IKEIGESEFSSTVL----ESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDK 119
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
D +Q +L+ +P+L+D+ A+WC C + P LE +AAE+ K
Sbjct: 11 DSFEQDVLKND---KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK 53
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
++DSD +++L + P+++D+ A WC C + P L+KLA E+
Sbjct: 7 VHDSDFAEKVL----KSKTPVVVDFWAPWCGPCRVIAPILDKLAGEY 49
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAE 125
S+P+L+D+ A+WC C + P LE++AAE
Sbjct: 23 SKPVLVDFWATWCGPCKMVAPVLEEIAAE 51
>sp|Q9M7X9|CITRX_ARATH Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis
thaliana GN=At3g06730 PE=1 SV=1
Length = 183
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Query: 91 LRAQELSQ--------PILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L AQEL + P+++D+ A+WC CI + +LE LA E+++
Sbjct: 80 LSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESN 126
>sp|P43785|THIO_HAEIN Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=trxA PE=3 SV=1
Length = 107
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
E+ IND+D + +++ + PIL+D+ A WC C + P L++LA EF K
Sbjct: 3 EVLHINDAD-FESVVVNS---DIPILLDFWAPWCGPCKMIAPVLDELAPEFAGK 52
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
E +ND D ++L E S P+L+D+ A WC C + P ++++A E+ K
Sbjct: 35 EAGAVND-DTFKNVVL---ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK 84
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 51 SRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCR 110
SR RR V EA + T+ + +NDS D ++L+A E P+ +D+ A WC
Sbjct: 56 SRVSRLRRGVICEA------QDTATGIPVVNDS-TWDSLVLKADE---PVFVDFWAPWCG 105
Query: 111 KCIYLKPKLEKLAAEF 126
C + P + +LA ++
Sbjct: 106 PCKMIDPIVNELAQKY 121
>sp|Q9CM49|THIO_PASMU Thioredoxin OS=Pasteurella multocida (strain Pm70) GN=trxA PE=3
SV=1
Length = 106
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
P+L+D+ A WC C + P L+++AAEF K
Sbjct: 21 PVLLDFWAPWCGPCRMISPILDEIAAEFSGK 51
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 87 DQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
D L + +E +PI++D+ A+WC C + P E L+ ++ K
Sbjct: 15 DAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK 57
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 92 RAQELSQPILIDWMASWCRKCIYLKPKLEKLAAE 125
R P+++D+ A WC C L P+LEK+ A+
Sbjct: 73 RVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAK 106
>sp|Q8KEA4|THIO1_CHLTE Thioredoxin-1 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx1 PE=3 SV=1
Length = 101
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 90 LLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+R EL P+ ID+ A WC C + P +++LA+EF +
Sbjct: 8 LIRTSEL--PVFIDFWADWCGPCKMVAPSVKQLASEFKGR 45
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAE 125
P+++D+ A WC C L P+LEK+ A+
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKMVAK 106
>sp|Q942L2|PDI22_ORYSJ Protein disulfide isomerase-like 2-2 OS=Oryza sativa subsp.
japonica GN=PDIL2-2 PE=2 SV=1
Length = 371
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 56 ARRDVRVEALWPDLSRPTSVELEPINDS------DHLDQILLRAQELSQPILIDWMASWC 109
+R A + + T+V+L I S D+ D I+L + ++ IL+++ A WC
Sbjct: 127 GQRSAEALAEFVNTEGGTNVKLATIPSSVVVLGPDNFDSIVL---DENKDILVEFYAPWC 183
Query: 110 RKCIYLKPKLEKLAAEF 126
C +L P EKLA+ +
Sbjct: 184 GHCKHLAPIYEKLASVY 200
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEF 126
L+++ A WC C L P+ EKL A F
Sbjct: 56 LVEFYAPWCGHCKKLAPEYEKLGASF 81
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAE 125
++P+L+D+ A+WC C + P LE++A+E
Sbjct: 367 NKPVLVDFWATWCGPCKMVAPVLEEIASE 395
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
E++ +NDS + +L E P+++D+ A WC C + P +++LA E+ K
Sbjct: 75 EVQDVNDSSWKEFVL----ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK 124
>sp|Q9HUW5|DSBD1_PSEAE Thiol:disulfide interchange protein DsbD 1 OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=dsbD1 PE=3 SV=1
Length = 591
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 73 TSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKC 112
T E + + LD L A++ +P+L+DW A WC C
Sbjct: 468 TPGEWQNLTTPAQLDAALAEARQAGKPVLLDWYADWCISC 507
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAE 125
P+++D+ A WC C L P+LEK+ A+
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKMVAK 106
>sp|O22022|THIO_CYAME Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1
Length = 102
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 85 HLDQILLRAQEL--SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
H+D++ + L + +L+D+ A WC C + P LE++A EF+ K
Sbjct: 3 HIDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEFNLK 49
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
+L+D+ ASWC C+ L P +E+LA +++ K
Sbjct: 23 VLVDFWASWCGPCMMLGPVIEQLADDYEGK 52
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
E++ +NDS D++++ ++ P+L+D+ A WC C + P +++LA E+ K
Sbjct: 68 EVQVVNDSS-WDELVIGSE---TPVLVDFWAPWCGPCRMIAPIIDELAKEYAGK 117
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 100 ILIDWMASWCRKCIYLKPKLEKLAAEF 126
+LID+ A WC C L P LE LAAE
Sbjct: 19 VLIDFFAEWCGPCKMLTPVLEALAAEL 45
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAE 125
P+++D+ A WC C L P+LEK+ A+
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKVVAK 106
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 92 RAQELSQPILIDWMASWCRKCIYLKPKLEKLA 123
+ + + P+++D+ A+WC C + P LEKL+
Sbjct: 15 KVTDATGPVVVDFHATWCGPCKAIAPALEKLS 46
>sp|Q9SEU8|TRXM2_ARATH Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520
PE=1 SV=2
Length = 186
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 73 TSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
T+ +++ +NDS D ++L+A + P+++D+ A WC C + P + LA + K
Sbjct: 78 TTTDIQVVNDST-WDSLVLKA---TGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGK 130
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+D+ A+WC C+ L P +E+LA +++ K
Sbjct: 25 LVDFWAAWCGPCMMLGPVIEELAGDYEGK 53
>sp|P96132|THIO_THIRO Thioredoxin (Fragment) OS=Thiocapsa roseopersicina GN=trxA PE=3
SV=1
Length = 91
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEF 126
+P+L+D+ A WC C + P L+++A E+
Sbjct: 22 EPVLVDYWADWCGPCKMIAPVLDEIAGEY 50
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
S +L+D+ A WC C L P LE LAAE
Sbjct: 16 SGLVLVDFFAEWCGPCRMLTPILENLAAEL 45
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
S+P+L+D+ A WC C + P LE++A E+
Sbjct: 21 SKPVLVDFWAEWCGPCKMIAPILEEIADEY 50
>sp|O22263|PDI21_ARATH Protein disulfide-isomerase like 2-1 OS=Arabidopsis thaliana
GN=PDIL2-1 PE=1 SV=1
Length = 361
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
D+ D+I+L + ++ +L+++ A WC C L P EK+A F
Sbjct: 149 DNFDEIVL---DQNKDVLVEFYAPWCGHCKSLAPTYEKVATVF 188
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEF 126
L+++ A WC C L P+ EKL A F
Sbjct: 44 LVEFYAPWCGHCKKLAPEYEKLGASF 69
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 100 ILIDWMASWCRKCIYLKPKLEKLAAEF 126
+L+D+ A WC C L P LE LAAE
Sbjct: 19 VLVDFFAEWCGPCKMLTPVLEALAAEL 45
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+D+ A+WC C + P LE+LA ++D K
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGK 49
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAE 125
++P+L+D+ A+WC C + P LE++A E
Sbjct: 25 NKPVLVDFWATWCGPCKMVAPVLEEIATE 53
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAE 125
++P+L+D+ A+WC C + P LE++A E
Sbjct: 25 NKPVLVDFWATWCGPCKMVAPVLEEIATE 53
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+D+ A+WC C + P LE+LA ++D K
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGK 49
>sp|P09856|TRXF_SPIOL Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 190
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEF 126
+P+++D WC C + PK EKLA E+
Sbjct: 103 KPVVLDMFTQWCGPCKAMAPKYEKLAEEY 131
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+D+ A+WC C + P LE+LA ++D K
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGK 49
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
L+D+ A+WC C + P LE+LA ++D K
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGK 49
>sp|O94504|TRX2_SCHPO Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=trx2 PE=1 SV=2
Length = 133
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAE 125
++D+ A WC C YLKP LEKL+ +
Sbjct: 51 VVDFYADWCGPCKYLKPFLEKLSEQ 75
>sp|Q17424|THIO2_CAEEL Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=3 SV=2
Length = 145
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEK 121
+ D D ++ + + S P+++D+ A WC C L P+LE+
Sbjct: 39 VFDIDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEE 80
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 86 LDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
D++L +++ +P+L+D+ A+WC C Y+ P L++++ + K
Sbjct: 69 FDELLEKSE---KPVLVDFYATWCGPCQYMVPILQEVSEKLGDK 109
>sp|Q9TW67|NGLY1_CAEEL Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis elegans GN=png-1 PE=1 SV=1
Length = 606
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 85 HLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT 128
L+ IL R+ + ++ I+ID+ A+WC C + P E+ +AE+
Sbjct: 11 ELNNILERS-DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGN 53
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 73 TSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK 129
T+ + +NDS + ++L+A E P+++D+ A WC C + P + +LA ++ K
Sbjct: 69 TATGIPMVNDS-TWESLVLKADE---PVVVDFWAPWCGPCKMIDPIVNELAQQYTGK 121
>sp|Q5WNE3|NGLY1_CAEBR Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1
Length = 602
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 79 PINDSDHLDQI--LLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF 126
P+ + L ++ +L + ++ I++D+ A+WC C + P E+L+ EF
Sbjct: 2 PVREVSRLPELNEILEKSDSNRLIIVDFFANWCGPCRMISPAFERLSMEF 51
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,577,574
Number of Sequences: 539616
Number of extensions: 1445394
Number of successful extensions: 4039
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3858
Number of HSP's gapped (non-prelim): 218
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)