STRING 9.05 
  rps15ae protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
rps15ae
rps15ae (ribosomal protein S15A E); structural constituent of ribosome; ribosomal protein S15A E (rps15ae); FUNCTIONS IN- structural constituent of ribosome; INVOLVED IN- translation; LOCATED IN- cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Ribosomal protein S8 (InterPro-IPR000630); BEST Arabidopsis thaliana protein match is- rps15ab (ribosomal protein S15A B); structural constituent of ribosome (TAIR-AT2G19720.1); Has 2257 Blast hits to 2257 proteins in [...] (129 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G60670
60S ribosomal protein L12 (RPL12C); 60S ribosomal protein L12 (RPL12C); FUNCTIONS IN- structura [...] (166 aa)
      0.874
AT1G48830
40S ribosomal protein S7 (RPS7A); 40S ribosomal protein S7 (RPS7A); FUNCTIONS IN- structural co [...] (191 aa)
     0.869
AT5G52650
40S ribosomal protein S10 (RPS10C); 40S ribosomal protein S10 (RPS10C); FUNCTIONS IN- structura [...] (179 aa)
      0.850
AT3G53430
60S ribosomal protein L12 (RPL12B); 60S ribosomal protein L12 (RPL12B); FUNCTIONS IN- structura [...] (166 aa)
      0.841
RACK1B_AT
RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding; Encodes a protein with sim [...] (326 aa)
      0.823
AT3G44590
60S acidic ribosomal protein P2 (RPP2D); 60S acidic ribosomal protein P2 (RPP2D); FUNCTIONS IN- [...] (111 aa)
      0.797
AT4G25890
60S acidic ribosomal protein P3 (RPP3A); 60S acidic ribosomal protein P3 (RPP3A); FUNCTIONS IN- [...] (119 aa)
      0.795
RPS21B
40S ribosomal protein S21 (RPS21B); 40S ribosomal protein S21 (RPS21B); FUNCTIONS IN- structura [...] (82 aa)
      0.792
emb1624
emb1624 (embryo defective 1624); ribosome binding / translation initiation factor; embryo defec [...] (245 aa)
       0.790
RPS24
40S ribosomal protein S24 (RPS24A); 40S ribosomal protein S24 (RPS24A); FUNCTIONS IN- structura [...] (133 aa)
     0.784
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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