Query 033022
Match_columns 129
No_of_seqs 193 out of 1483
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 14:21:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f3y_A Diadenosine 5',5'''-P1, 99.9 2.2E-24 7.5E-29 145.9 5.6 80 1-80 6-85 (165)
2 3i7u_A AP4A hydrolase; nudix p 99.9 5.5E-23 1.9E-27 136.3 9.2 107 9-120 4-121 (134)
3 3u53_A BIS(5'-nucleosyl)-tetra 99.9 1.1E-22 3.9E-27 137.2 7.3 56 10-65 4-68 (155)
4 2kdv_A RNA pyrophosphohydrolas 99.8 4.6E-20 1.6E-24 125.8 13.8 79 1-81 1-81 (164)
5 2o1c_A DATP pyrophosphohydrola 99.8 5.2E-21 1.8E-25 127.2 8.7 64 1-64 1-65 (150)
6 3r03_A Nudix hydrolase; struct 99.8 3E-20 1E-24 123.1 10.5 109 8-119 7-127 (144)
7 3grn_A MUTT related protein; s 99.8 3.7E-20 1.3E-24 124.3 10.8 105 5-111 4-119 (153)
8 3gg6_A Nudix motif 18, nucleos 99.8 2.8E-20 9.5E-25 125.1 10.2 105 8-116 19-135 (156)
9 3gwy_A Putative CTP pyrophosph 99.8 4.6E-20 1.6E-24 122.1 11.0 106 8-118 5-123 (140)
10 2pbt_A AP4A hydrolase; nudix p 99.8 1.9E-20 6.6E-25 122.5 9.0 103 9-116 4-117 (134)
11 3q93_A 7,8-dihydro-8-oxoguanin 99.8 6E-20 2.1E-24 126.5 11.5 108 8-117 23-140 (176)
12 1ktg_A Diadenosine tetraphosph 99.8 1E-20 3.4E-25 124.6 7.1 56 9-64 3-61 (138)
13 4dyw_A MUTT/nudix family prote 99.8 3.1E-19 1.1E-23 120.5 14.5 102 8-112 28-142 (157)
14 3f6a_A Hydrolase, nudix family 99.8 2.1E-19 7.1E-24 121.4 12.3 56 8-65 5-60 (159)
15 1k2e_A Nudix homolog; nudix/MU 99.8 1.2E-19 4.2E-24 122.4 11.1 54 10-65 2-55 (156)
16 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 3.4E-19 1.2E-23 117.7 12.8 58 8-65 8-69 (139)
17 3id9_A MUTT/nudix family prote 99.8 1.7E-19 5.8E-24 123.1 11.5 56 8-64 22-77 (171)
18 3exq_A Nudix family hydrolase; 99.8 7E-20 2.4E-24 124.3 9.3 102 8-111 9-121 (161)
19 3eds_A MUTT/nudix family prote 99.8 1.1E-19 3.9E-24 122.1 10.2 102 8-111 20-135 (153)
20 1sjy_A MUTT/nudix family prote 99.8 3.5E-19 1.2E-23 119.7 12.2 58 8-65 12-75 (159)
21 1vcd_A NDX1; nudix protein, di 99.8 6.9E-20 2.4E-24 118.8 8.3 54 10-65 3-56 (126)
22 3son_A Hypothetical nudix hydr 99.8 4.4E-20 1.5E-24 123.3 7.3 56 9-65 5-63 (149)
23 3oga_A Nucleoside triphosphata 99.8 6E-19 2.1E-23 119.7 12.6 114 9-122 27-160 (165)
24 3hhj_A Mutator MUTT protein; n 99.8 1.6E-19 5.4E-24 121.8 9.4 103 9-112 29-141 (158)
25 3fcm_A Hydrolase, nudix family 99.8 2.3E-19 7.8E-24 125.5 9.9 55 8-63 44-99 (197)
26 1rya_A GDP-mannose mannosyl hy 99.8 2.7E-19 9.2E-24 120.4 9.8 57 8-64 17-75 (160)
27 3q1p_A Phosphohydrolase (MUTT/ 99.8 4.7E-19 1.6E-23 124.9 9.9 55 9-65 68-122 (205)
28 2b0v_A Nudix hydrolase; struct 99.8 1.2E-18 4.1E-23 116.4 11.4 94 15-110 13-119 (153)
29 2w4e_A MUTT/nudix family prote 99.8 8.8E-19 3E-23 116.9 10.6 59 8-66 4-65 (145)
30 2azw_A MUTT/nudix family prote 99.8 3.7E-19 1.3E-23 118.2 8.5 56 8-65 17-73 (148)
31 3fk9_A Mutator MUTT protein; s 99.8 1.2E-18 4E-23 121.3 11.4 54 10-65 5-58 (188)
32 1hzt_A Isopentenyl diphosphate 99.8 9.7E-19 3.3E-23 121.5 10.9 59 8-66 31-94 (190)
33 2jvb_A Protein PSU1, mRNA-deca 99.8 1.3E-19 4.5E-24 120.5 6.2 56 10-66 5-61 (146)
34 3ees_A Probable pyrophosphohyd 99.8 1.5E-18 5.3E-23 115.6 11.3 99 10-111 22-130 (153)
35 2pqv_A MUTT/nudix family prote 99.8 1.8E-18 6.2E-23 116.0 11.4 54 8-65 18-71 (154)
36 2rrk_A ORF135, CTP pyrophospho 99.8 7.6E-19 2.6E-23 115.7 8.9 56 10-65 9-67 (140)
37 2fkb_A Putative nudix hydrolas 99.8 8.2E-19 2.8E-23 120.5 9.0 58 8-65 36-98 (180)
38 2fvv_A Diphosphoinositol polyp 99.8 2.2E-18 7.5E-23 120.7 11.2 59 7-65 38-98 (194)
39 3shd_A Phosphatase NUDJ; nudix 99.8 1.4E-18 4.7E-23 116.3 9.5 51 15-65 10-61 (153)
40 3f13_A Putative nudix hydrolas 99.8 2.3E-18 7.8E-23 117.5 10.1 54 11-66 17-70 (163)
41 3cng_A Nudix hydrolase; struct 99.8 4E-18 1.4E-22 118.5 11.2 100 11-115 42-151 (189)
42 1nqz_A COA pyrophosphatase (MU 99.8 1.2E-18 4E-23 121.3 8.4 59 7-65 32-96 (194)
43 3h95_A Nucleoside diphosphate- 99.8 4.1E-18 1.4E-22 119.3 10.7 58 8-65 25-84 (199)
44 3o8s_A Nudix hydrolase, ADP-ri 99.8 3.7E-18 1.3E-22 120.4 9.8 53 9-64 70-122 (206)
45 2b06_A MUTT/nudix family prote 99.8 8.3E-18 2.8E-22 112.7 10.3 100 8-111 7-119 (155)
46 3i9x_A MUTT/nudix family prote 99.8 1.6E-18 5.5E-23 120.2 6.8 57 8-64 26-98 (187)
47 1v8y_A ADP-ribose pyrophosphat 99.7 4E-18 1.4E-22 116.4 8.6 56 9-66 34-92 (170)
48 2yvp_A NDX2, MUTT/nudix family 99.7 1.8E-18 6.2E-23 119.2 6.8 56 10-65 42-100 (182)
49 1mut_A MUTT, nucleoside tripho 99.7 8.5E-19 2.9E-23 113.8 4.6 97 13-111 8-113 (129)
50 2a6t_A SPAC19A8.12; alpha/beta 99.7 7.7E-18 2.6E-22 123.5 10.2 57 10-66 102-159 (271)
51 1vhz_A ADP compounds hydrolase 99.7 2.7E-17 9.4E-22 115.3 11.6 56 10-66 50-108 (198)
52 2fb1_A Conserved hypothetical 99.7 8E-18 2.8E-22 120.4 8.3 58 8-65 12-74 (226)
53 1q27_A Putative nudix hydrolas 99.7 3.4E-18 1.1E-22 116.6 5.9 57 9-65 34-95 (171)
54 1vk6_A NADH pyrophosphatase; 1 99.7 3.7E-17 1.3E-21 119.8 11.1 95 14-110 144-245 (269)
55 3o6z_A GDP-mannose pyrophospha 99.7 1.9E-17 6.6E-22 115.4 8.9 57 9-66 45-111 (191)
56 3e57_A Uncharacterized protein 99.7 2E-18 6.7E-23 122.5 3.6 58 8-65 66-136 (211)
57 3gz5_A MUTT/nudix family prote 99.7 1.5E-17 5.2E-22 119.9 8.0 57 9-65 22-85 (240)
58 1mk1_A ADPR pyrophosphatase; n 99.7 3.6E-17 1.2E-21 115.3 9.2 57 10-66 44-104 (207)
59 2qjo_A Bifunctional NMN adenyl 99.7 1.6E-17 5.4E-22 124.2 6.9 57 8-65 202-260 (341)
60 2qjt_B Nicotinamide-nucleotide 99.7 1.9E-17 6.7E-22 124.4 7.4 57 8-65 207-265 (352)
61 1g0s_A Hypothetical 23.7 kDa p 99.7 2E-16 6.8E-21 111.8 9.7 57 10-66 58-123 (209)
62 3q91_A Uridine diphosphate glu 99.7 2.1E-16 7E-21 112.7 9.8 56 9-64 36-127 (218)
63 3fjy_A Probable MUTT1 protein; 99.7 1.4E-16 4.9E-21 120.7 7.4 43 21-64 38-80 (364)
64 1x51_A A/G-specific adenine DN 99.6 8.4E-17 2.9E-21 108.1 4.7 54 11-64 21-82 (155)
65 2dsc_A ADP-sugar pyrophosphata 99.6 8.2E-16 2.8E-20 108.7 10.0 57 9-65 61-124 (212)
66 2fml_A MUTT/nudix family prote 99.6 1.1E-15 3.8E-20 112.0 9.8 57 8-64 38-101 (273)
67 3fsp_A A/G-specific adenine gl 99.6 6.4E-16 2.2E-20 117.6 8.1 96 10-110 241-344 (369)
68 1u20_A U8 snoRNA-binding prote 99.6 2E-16 6.7E-21 112.1 4.9 46 18-65 53-99 (212)
69 2dho_A Isopentenyl-diphosphate 99.6 4.1E-15 1.4E-19 107.0 10.6 57 8-64 58-128 (235)
70 2pny_A Isopentenyl-diphosphate 99.6 3.8E-15 1.3E-19 107.8 9.1 57 8-64 69-139 (246)
71 3qsj_A Nudix hydrolase; struct 99.5 1.1E-14 3.9E-19 104.5 4.8 59 6-64 5-91 (232)
72 3dup_A MUTT/nudix family prote 99.5 2E-13 6.8E-18 101.3 10.8 57 8-64 117-181 (300)
73 1q33_A Pyrophosphatase, ADP-ri 99.5 7.7E-14 2.6E-18 103.2 6.7 41 22-63 140-180 (292)
74 2xsq_A U8 snoRNA-decapping enz 99.4 1.9E-13 6.5E-18 97.2 4.6 42 22-65 66-108 (217)
75 3bho_A Cleavage and polyadenyl 99.3 4.7E-12 1.6E-16 88.7 8.5 54 7-62 56-112 (208)
76 3kvh_A Protein syndesmos; NUDT 99.3 7.2E-13 2.5E-17 92.2 4.0 55 6-62 18-84 (214)
77 3rh7_A Hypothetical oxidoreduc 99.2 2.7E-11 9.2E-16 90.7 7.5 89 10-111 184-276 (321)
78 3t3l_A Frataxin, mitochondrial 52.1 21 0.00072 22.7 4.0 22 43-64 96-117 (129)
79 1ew4_A CYAY protein; friedreic 32.6 47 0.0016 20.2 3.3 22 43-64 82-103 (106)
80 3oeq_A Frataxin homolog, mitoc 27.7 54 0.0018 20.7 2.9 19 43-61 102-120 (123)
81 1zl8_A LIN-7; heterodimer, alp 27.4 30 0.001 18.4 1.4 13 47-59 39-51 (53)
82 3ezw_A Glycerol kinase; glycer 26.9 81 0.0028 24.4 4.5 55 11-66 15-73 (526)
83 1kvd_B SMK toxin; halotolerant 24.0 98 0.0034 16.9 3.8 31 10-47 41-72 (77)
84 1vig_A Vigilin; RNA-binding pr 22.6 41 0.0014 18.5 1.6 13 52-64 26-38 (71)
85 1wri_A Ferredoxin II, ferredox 21.7 71 0.0024 18.3 2.6 15 41-55 16-30 (93)
86 1frr_A Ferredoxin I; electron 20.7 65 0.0022 18.4 2.3 18 42-64 17-34 (95)
87 2vld_A NUCS, UPF0286 protein p 20.1 95 0.0032 22.0 3.3 34 11-44 50-84 (251)
88 1awd_A Ferredoxin; electron tr 20.1 82 0.0028 18.1 2.6 17 42-63 16-32 (94)
No 1
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.90 E-value=2.2e-24 Score=145.85 Aligned_cols=80 Identities=73% Similarity=1.321 Sum_probs=65.5
Q ss_pred CCCCCCCCcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecC
Q 033022 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 80 (129)
Q Consensus 1 m~~~~~~~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (129)
|...+..+|.++++++++.++++||++|...+|.|++|||++++|||+++||+||++||||+.+..+......+..+.++
T Consensus 6 ~~~~~~~~~~~v~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 85 (165)
T 1f3y_A 6 MDSPPEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFP 85 (165)
T ss_dssp CSSCCSSCCCEEEEEEECTTSCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCC
T ss_pred ccCCccceeeeEEEEEECCCCcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecC
Confidence 44556668999999999999999999998767999999999999999999999999999999975554443333344443
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.89 E-value=5.5e-23 Score=136.29 Aligned_cols=107 Identities=22% Similarity=0.364 Sum_probs=69.5
Q ss_pred cCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee--EEeecCceEEeecCCCeeEe
Q 033022 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE--IIAEVPNWLTYDFPPAVKTK 86 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~~~~~~~~~~~~~~~~~ 86 (129)
+.+|+++|++ +++|||++|.+ |.|.+|||++|+|||+.+||+||++||||+++.. .+.... ..+.........
T Consensus 4 ~~aag~vv~~-~~~vLL~~r~~--g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~--~~~~~~~~~~~~ 78 (134)
T 3i7u_A 4 EFSAGGVLFK-DGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIH--YWYTLKGERIFK 78 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEE--EEEEETTEEEEE
T ss_pred EEEEEEEEEE-CCEEEEEEeCC--CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeee--EEecCCCceEEE
Confidence 4466667765 47999999864 8999999999999999999999999999999632 222211 122222222222
Q ss_pred EEEEeccee---------eeeeeeEEecccccCCCCccccccc
Q 033022 87 VNRLWGGEW---------HGQAQKWYASLLLLVPLTLSTHTHF 120 (129)
Q Consensus 87 ~~~~~~~~~---------~~~~~~W~~~~~~~~~~~~~~~~~~ 120 (129)
..++|.... +..+.+||+++.+...+.++.+...
T Consensus 79 ~~~~f~~~~~~~~~~~~~E~~~~~W~~~~e~~~~l~~~~~r~i 121 (134)
T 3i7u_A 79 TVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLLKYKGDKEI 121 (134)
T ss_dssp EEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHBCSHHHHHH
T ss_pred EEEEEEEEEcCCcCcCChhheEEEEEEHHHHhhhcCChHHHHH
Confidence 223332221 2357789998877666655544443
No 3
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.87 E-value=1.1e-22 Score=137.22 Aligned_cols=56 Identities=29% Similarity=0.496 Sum_probs=49.3
Q ss_pred CEEEEEEE---------eCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLI---------NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~---------~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
++++++++ |++.++||++|++.+|.|.+|||++|+|||+.+||+||++||||+.+.
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~ 68 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAG 68 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGG
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccc
Confidence 46788877 344689999999877899999999999999999999999999999963
No 4
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.84 E-value=4.6e-20 Score=125.82 Aligned_cols=79 Identities=44% Similarity=0.807 Sum_probs=64.8
Q ss_pred CCCCCCCCcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee--eEEeecCceEEee
Q 033022 1 MDGLPSGYRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA--EIIAEVPNWLTYD 78 (129)
Q Consensus 1 m~~~~~~~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~--~~~~~~~~~~~~~ 78 (129)
|++- .++|.+|++++++.++++||++|.. +|.|.+|||++++|||+.+||+||++||||+.+. .++.....++.|.
T Consensus 1 m~~~-~~~~~~v~~~i~~~~~~vLl~~r~~-~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~ 78 (164)
T 2kdv_A 1 MIDD-DGYRPNVGIVICNRQGQVMWARRFG-QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYK 78 (164)
T ss_dssp CCCS-SSEEEEEEEEEECTTSEEEEEEETT-CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEE
T ss_pred CCCC-CCCCcEEEEEEEccCCEEEEEEEcC-CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEe
Confidence 5543 3588899999999889999999986 7899999999999999999999999999999863 4455555555666
Q ss_pred cCC
Q 033022 79 FPP 81 (129)
Q Consensus 79 ~~~ 81 (129)
++.
T Consensus 79 ~~~ 81 (164)
T 2kdv_A 79 LPK 81 (164)
T ss_dssp CCT
T ss_pred cCc
Confidence 654
No 5
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.84 E-value=5.2e-21 Score=127.20 Aligned_cols=64 Identities=30% Similarity=0.440 Sum_probs=54.4
Q ss_pred CCCCCCCCcCEEEEEEEeCC-CcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 1 MDGLPSGYRPNVGVCLINSD-SQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 1 m~~~~~~~~~~~~~~i~~~~-~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
|..|+-..+.++++++++.+ +++||++|...+|.|.+|||++++|||+.+||+||++||||+.+
T Consensus 1 m~~m~~~~~~~v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~ 65 (150)
T 2o1c_A 1 MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDV 65 (150)
T ss_dssp -CCCCCBCSEEEEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCH
T ss_pred CCcccccCceEEEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCc
Confidence 66775234457777888875 89999999876799999999999999999999999999999996
No 6
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.83 E-value=3e-20 Score=123.09 Aligned_cols=109 Identities=22% Similarity=0.315 Sum_probs=72.3
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeE--EeecCceEEeecCCC
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEI--IAEVPNWLTYDFPPA 82 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~--~~~~~~~~~~~~~~~ 82 (129)
.+..+++++++.++++||++|.. ++|.|++|||++++||++.+||+||++||||+.+... ... ....+.++..
T Consensus 7 ~~~~~~~vi~~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~--~~~~~~~~~~ 84 (144)
T 3r03_A 7 ILLVTAAALIDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPL--AFASHSYDTF 84 (144)
T ss_dssp EEEEEEEEEBCTTSCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE--EEEEEECSSS
T ss_pred eeEEEEEEEEcCCCEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEE--EeeeccCCCe
Confidence 45566677778889999999985 3589999999999999999999999999999986322 111 1234454443
Q ss_pred eeEeEEEEecc----e---eeeeeeeEEecccccCCCCcccccc
Q 033022 83 VKTKVNRLWGG----E---WHGQAQKWYASLLLLVPLTLSTHTH 119 (129)
Q Consensus 83 ~~~~~~~~~~~----~---~~~~~~~W~~~~~~~~~~~~~~~~~ 119 (129)
... +..|... . .+..+.+|++++.+......+.+..
T Consensus 85 ~~~-~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~ 127 (144)
T 3r03_A 85 HLL-MPLYACRSWRGRATAREGQTLAWVRAERLREYPMPPADLP 127 (144)
T ss_dssp EEE-EEEEEECCCBSCCCCCSSCEEEEECGGGGGGSCCCTTTTT
T ss_pred EEE-EEEEEEEecCCccCCCCcceEEEEeHHHhccCCCCcchHH
Confidence 322 1122111 1 1235678999887765433333333
No 7
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.83 E-value=3.7e-20 Score=124.29 Aligned_cols=105 Identities=18% Similarity=0.245 Sum_probs=71.9
Q ss_pred CCCCcCEEEEEEEeCCCcEEEEEEcC----CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecC
Q 033022 5 PSGYRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 80 (129)
Q Consensus 5 ~~~~~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 80 (129)
+..++.+|+++|++.++++||++|.. .+|.|++|||++++|||+.+||+||++||||+.+... ..+ ....+.++
T Consensus 4 ~~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~~~-~~~~~~~~ 81 (153)
T 3grn_A 4 EKPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPG-DIA-GQVNFELT 81 (153)
T ss_dssp SSCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC-SEE-EEEEEECS
T ss_pred CCceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecc-eEE-EEEEEecC
Confidence 33477788888999889999999985 3589999999999999999999999999999986321 111 12234454
Q ss_pred CCeeEeEEEE---ecce----eeeeeeeEEecccccCC
Q 033022 81 PAVKTKVNRL---WGGE----WHGQAQKWYASLLLLVP 111 (129)
Q Consensus 81 ~~~~~~~~~~---~~~~----~~~~~~~W~~~~~~~~~ 111 (129)
........+. ..+. .+..+.+|++++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 82 EKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp SCEEEEEEEEEEECCCCCCCCTTEEEEEEECHHHHTTC
T ss_pred CceEEEEEEEEEecCCcEecCCCcceEEEEEHHHhhhc
Confidence 4332211111 1111 12457789998766543
No 8
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=125.15 Aligned_cols=105 Identities=22% Similarity=0.335 Sum_probs=70.9
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
....+++++++.++++||++|.+. +|.|++|||++++|||+.+||+||++||||+++... ..+ ..+........
T Consensus 19 ~~~~v~~~i~~~~~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~---~~~~~~~~~~~ 94 (156)
T 3gg6_A 19 VCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE-TLL---SVEERGPSWVR 94 (156)
T ss_dssp CEEEEEEECBCTTSEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE-EEE---EEEESSTTEEE
T ss_pred eEEEEEEEEEeCCCEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee-eEE---EEEcCCCCEEE
Confidence 444566777888899999999863 589999999999999999999999999999996322 111 11222222211
Q ss_pred --eEEEEeccee--------eeeeeeEEecccccCCCCccc
Q 033022 86 --KVNRLWGGEW--------HGQAQKWYASLLLLVPLTLST 116 (129)
Q Consensus 86 --~~~~~~~~~~--------~~~~~~W~~~~~~~~~~~~~~ 116 (129)
+.+....+.. +..+.+|++++.+...+....
T Consensus 95 ~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 135 (156)
T 3gg6_A 95 FVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHD 135 (156)
T ss_dssp EEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTH
T ss_pred EEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchh
Confidence 1222211111 234779999998887665444
No 9
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.83 E-value=4.6e-20 Score=122.13 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=66.4
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC-----CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCC
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN-----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPA 82 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~-----~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 82 (129)
....+++++.+ ++++||++|.. .+|.|++|||++++|||+.+||+||++||||+.+... ..+ ....+.++..
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~-~~~-~~~~~~~~~~ 81 (140)
T 3gwy_A 5 SIEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG-EKL-LTVHHTYPDF 81 (140)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE-EEE-EEEECCCSSC
T ss_pred EEEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec-eEE-EEEEEEeCCc
Confidence 44456666666 78999999985 4689999999999999999999999999999996332 111 1223444433
Q ss_pred eeEeEEEEecce-----e---eeeeeeEEecccccCCCCccccc
Q 033022 83 VKTKVNRLWGGE-----W---HGQAQKWYASLLLLVPLTLSTHT 118 (129)
Q Consensus 83 ~~~~~~~~~~~~-----~---~~~~~~W~~~~~~~~~~~~~~~~ 118 (129)
... ..+|... . +..+.+|++++.+......+.+.
T Consensus 82 ~~~--~~~f~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 123 (140)
T 3gwy_A 82 EIT--MHAFLCHPVGQRYVLKEHIAAQWLSTREMAILDWAEADK 123 (140)
T ss_dssp CEE--EEEEEEEECCSCCCCCSSCEEEEECHHHHTTSCBCGGGH
T ss_pred eEE--EEEEEEEecCCcccccccceeEeccHHHHhhCCCCcccH
Confidence 221 1222211 1 23567899987765543333333
No 10
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.83 E-value=1.9e-20 Score=122.53 Aligned_cols=103 Identities=21% Similarity=0.336 Sum_probs=67.4
Q ss_pred cCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecC--CCeeEe
Q 033022 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP--PAVKTK 86 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~--~~~~~~ 86 (129)
..++++++++ ++++||++|.+ |.|.+|||++++|||+.+||+||++||||+.+.... .+. ...+.++ ......
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~--~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~-~~~~~~~~~~~~~~~ 78 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS--NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILD-YIG-EIHYWYTLKGERIFK 78 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT--SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEE-EEE-EEEEEEEETTEEEEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC--CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEee-eee-EEEEEeeCCCcEEEE
Confidence 3466777777 57999999976 899999999999999999999999999999964321 111 1122222 212222
Q ss_pred EEEEeccee---------eeeeeeEEecccccCCCCccc
Q 033022 87 VNRLWGGEW---------HGQAQKWYASLLLLVPLTLST 116 (129)
Q Consensus 87 ~~~~~~~~~---------~~~~~~W~~~~~~~~~~~~~~ 116 (129)
...+|.... +..+.+|++++.+...+..+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~ 117 (134)
T 2pbt_A 79 TVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKKLLKYKG 117 (134)
T ss_dssp EEEEEEEEEEEECCCCCTTSSEEEEEEHHHHHHHCCSHH
T ss_pred EEEEEEEEecCCCcCCCcceeEEEEEcHHHHHhhhcchh
Confidence 223332222 134678999887665444333
No 11
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.83 E-value=6e-20 Score=126.54 Aligned_cols=108 Identities=16% Similarity=0.253 Sum_probs=71.5
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC--CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~--~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
.+..+++++++.++++||++|.+ .+|.|.+|||++++|||+.+||+||++||||+.+..+. .+ ....+.++.....
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~l-~~~~~~~~~~~~~ 100 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALH-KV-GQIVFEFVGEPEL 100 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCE-EE-EEEEEEETTCSCE
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeE-EE-EEEEEEcCCCCcE
Confidence 55667777778889999999875 35899999999999999999999999999999963221 11 1223444432222
Q ss_pred e-EEEEeccee-------eeeeeeEEecccccCCCCcccc
Q 033022 86 K-VNRLWGGEW-------HGQAQKWYASLLLLVPLTLSTH 117 (129)
Q Consensus 86 ~-~~~~~~~~~-------~~~~~~W~~~~~~~~~~~~~~~ 117 (129)
. ...|..... +..+.+|++++.+......+.+
T Consensus 101 ~~~~~f~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~ 140 (176)
T 3q93_A 101 MDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDD 140 (176)
T ss_dssp EEEEEEEESCEESCCCCCSSEEEEEEETTCCCGGGBCTTH
T ss_pred EEEEEEEEECCCCCcCCCcceeeEEeeHHHccccccCcch
Confidence 2 222222111 1356689999877644333333
No 12
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.83 E-value=1e-20 Score=124.59 Aligned_cols=56 Identities=27% Similarity=0.487 Sum_probs=48.4
Q ss_pred cCEEEEEEEeC---CCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 9 RPNVGVCLINS---DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 9 ~~~~~~~i~~~---~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
+.++++++++. ++++||++|+..+|.|.+|||++++|||+.+||+||++||||+.+
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~ 61 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITK 61 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCG
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCc
Confidence 45677777765 368999999865679999999999999999999999999999963
No 13
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.83 E-value=3.1e-19 Score=120.55 Aligned_cols=102 Identities=24% Similarity=0.302 Sum_probs=68.6
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC--CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~--~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
.+.+|+++|++ +++|||++|.+ .+|.|.+|||++++|||+.+||+||++||||+.+... ..+ ....+.+......
T Consensus 28 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-~~~-~~~~~~~~~~~~~ 104 (157)
T 4dyw_A 28 PRVGCGAAIVR-DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA-TLL-CVVDHIDAANGEH 104 (157)
T ss_dssp CEEEEEEEEEE-TTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC-EEE-EEEEEEETTTTEE
T ss_pred ceeEEEEEEEE-CCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC-cEE-EEEEeeccCCCcE
Confidence 55667777777 68999999986 3589999999999999999999999999999996322 111 1123333322222
Q ss_pred eEEEEecce-----e------eeeeeeEEecccccCCC
Q 033022 86 KVNRLWGGE-----W------HGQAQKWYASLLLLVPL 112 (129)
Q Consensus 86 ~~~~~~~~~-----~------~~~~~~W~~~~~~~~~~ 112 (129)
....+|... . +..+.+|++++.+...+
T Consensus 105 ~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~l 142 (157)
T 4dyw_A 105 WVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQPL 142 (157)
T ss_dssp EEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSSB
T ss_pred EEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHccccc
Confidence 222222211 1 13577999998887643
No 14
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.82 E-value=2.1e-19 Score=121.39 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=49.8
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+++++|++ +++|||++|.+ +|.|.+|||++++|||+.+||+||++||||+++.
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 60 (159)
T 3f6a_A 5 RHFTVSVFIVC-KDKVLLHLHKK-AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVT 60 (159)
T ss_dssp SCEEEEEEEEE-TTEEEEEECSS-SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred ceEEEEEEEEE-CCEEEEEEcCC-CCeEECCccCccCCCCHHHHHHHHHHHHhCCCce
Confidence 56677777777 67999999986 7899999999999999999999999999999863
No 15
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.82 E-value=1.2e-19 Score=122.39 Aligned_cols=54 Identities=30% Similarity=0.475 Sum_probs=47.9
Q ss_pred CEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
..++++|++ ++++||++|.+ +|.|.+|||++|+|||+.+||+||++||||+++.
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred eEEEEEEEE-CCEEEEEEEcC-CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 356677777 78999999876 6899999999999999999999999999999863
No 16
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.82 E-value=3.4e-19 Score=117.69 Aligned_cols=58 Identities=31% Similarity=0.338 Sum_probs=50.3
Q ss_pred CcCEEEEEEEe--CCCc--EEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLIN--SDSQ--IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~--~~~~--vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+++++|++ .+++ +||++|.+.++.|++|||++++|||+.+||+||++||||+.+.
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 69 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVR 69 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 45677777776 6677 9999998766679999999999999999999999999999963
No 17
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.82 E-value=1.7e-19 Score=123.06 Aligned_cols=56 Identities=32% Similarity=0.572 Sum_probs=49.3
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
++..|++++++ ++++||++|...+|.|.+|||++++|||+.+||+||++||||+++
T Consensus 22 ~~~~v~~ii~~-~~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~ 77 (171)
T 3id9_A 22 MQVRVTGILIE-DEKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEV 77 (171)
T ss_dssp CEEEEEEEEEE-TTEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCE
T ss_pred eEEEEEEEEEE-CCEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCcc
Confidence 45566666666 579999999876799999999999999999999999999999996
No 18
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.81 E-value=7e-20 Score=124.26 Aligned_cols=102 Identities=20% Similarity=0.245 Sum_probs=67.1
Q ss_pred CcCEEEEEEEeCC-CcEEEEEEcC--CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCee
Q 033022 8 YRPNVGVCLINSD-SQIFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVK 84 (129)
Q Consensus 8 ~~~~~~~~i~~~~-~~vLl~~r~~--~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (129)
.+.++.++|++.+ ++|||++|.+ +.|.|++|||++++|||+.+||+||++||||+.+.... .. ....+.++....
T Consensus 9 ~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~-~~-~~~~~~~~~~~~ 86 (161)
T 3exq_A 9 VELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVT-FC-GTCEWFDDDRQH 86 (161)
T ss_dssp EEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCE-EE-EEEEEECSSCSS
T ss_pred ceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCc-EE-EEEecccCCCCe
Confidence 4556666666766 6999999885 34789999999999999999999999999999963221 11 122334422222
Q ss_pred EeEEEEecce-e-------eeeeeeEEecccccCC
Q 033022 85 TKVNRLWGGE-W-------HGQAQKWYASLLLLVP 111 (129)
Q Consensus 85 ~~~~~~~~~~-~-------~~~~~~W~~~~~~~~~ 111 (129)
.....++... . +..+.+|++++.+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 87 RKLGLLYRASNFTGTLKASAEGQLSWLPITALTRE 121 (161)
T ss_dssp EEEEEEEEECCEESCCCGGGTTTEEEECGGGCCTT
T ss_pred EEEEEEEEEeccCCccCCCccceEEEeeHHHhhhC
Confidence 2222222221 1 1356789998877653
No 19
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.81 E-value=1.1e-19 Score=122.15 Aligned_cols=102 Identities=21% Similarity=0.301 Sum_probs=66.8
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee--EEeecCc-eEEeecCCCee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE--IIAEVPN-WLTYDFPPAVK 84 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~~~~-~~~~~~~~~~~ 84 (129)
.+.++++++++.++++||++|. +|.|.+|||++++|||+.+||+||++||||+.+.. ++..+.. ...+.++....
T Consensus 20 ~~~~v~~ii~~~~~~vLL~~r~--~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (153)
T 3eds_A 20 FXPSVAAVIKNEQGEILFQYPG--GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGDE 97 (153)
T ss_dssp EEEEEEEEEBCTTCCEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSCE
T ss_pred EeeeEEEEEEcCCCeEEEEEcC--CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCCe
Confidence 4567777888888999999887 78999999999999999999999999999999632 2222110 11345555432
Q ss_pred -EeEEEEeccee----------eeeeeeEEecccccCC
Q 033022 85 -TKVNRLWGGEW----------HGQAQKWYASLLLLVP 111 (129)
Q Consensus 85 -~~~~~~~~~~~----------~~~~~~W~~~~~~~~~ 111 (129)
.....+|.... +..+.+|++++.+...
T Consensus 98 ~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l 135 (153)
T 3eds_A 98 VEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPL 135 (153)
T ss_dssp EEEEEEEEEEEEEEECCC-------CEEEECGGGCCCB
T ss_pred EEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchh
Confidence 11222222221 1357799999877643
No 20
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.81 E-value=3.5e-19 Score=119.72 Aligned_cols=58 Identities=38% Similarity=0.662 Sum_probs=52.0
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC------CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~------~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.++++++++.++++||++|.+ .+|.|++|||++++|||+.+||+||++||||+.+.
T Consensus 12 ~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 75 (159)
T 1sjy_A 12 ELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVR 75 (159)
T ss_dssp CEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEE
T ss_pred EEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccce
Confidence 56677778888889999999985 56899999999999999999999999999999964
No 21
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.81 E-value=6.9e-20 Score=118.83 Aligned_cols=54 Identities=31% Similarity=0.528 Sum_probs=49.6
Q ss_pred CEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.++++++++.++++||++|.+ |.|++|||++++|||+.+||+||++||||+.+.
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~--g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~ 56 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM--GFWVFPKGHPEPGESLEEAAVREVWEETGVRAE 56 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT--SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC--CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEee
Confidence 467888888888999999986 899999999999999999999999999999964
No 22
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.81 E-value=4.4e-20 Score=123.27 Aligned_cols=56 Identities=30% Similarity=0.275 Sum_probs=48.2
Q ss_pred cCEEEEEEE---eCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 9 RPNVGVCLI---NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 9 ~~~~~~~i~---~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
..+|.++++ +.++++||++|.+ +|.|.+|||++|+|||+.+||+||++||||+++.
T Consensus 5 ~~~v~vvi~~~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~ 63 (149)
T 3son_A 5 PFQVLVIPFIKTEANYQFGVLHRTD-ADVWQFVAGGGEDEEAISETAKRESIEELNLDVD 63 (149)
T ss_dssp CCEEEEEEEEECSSSEEEEEEEESS-SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSC
T ss_pred ceEEEEEEEEecCCCeEEEEEEEcC-CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 346666665 5567999999987 5899999999999999999999999999999963
No 23
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.81 E-value=6e-19 Score=119.65 Aligned_cols=114 Identities=20% Similarity=0.260 Sum_probs=70.5
Q ss_pred cCEEEEEEEeCCCcEEEEEEcC----CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee--EEee--cCceEEeecC
Q 033022 9 RPNVGVCLINSDSQIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE--IIAE--VPNWLTYDFP 80 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~--~~~~--~~~~~~~~~~ 80 (129)
+..+++++++.++++||++|.. ++|.|.+|||++++|||+.+||+||++||||+.+.. +... ......+.|+
T Consensus 27 ~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 106 (165)
T 3oga_A 27 QRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYA 106 (165)
T ss_dssp EEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC-
T ss_pred eEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecC
Confidence 4455566677788999999884 348999999999999999999999999999999632 2111 0111234555
Q ss_pred CCeeEe---EEEEec-----ce----eeeeeeeEEecccccCCCCccccccccc
Q 033022 81 PAVKTK---VNRLWG-----GE----WHGQAQKWYASLLLLVPLTLSTHTHFMK 122 (129)
Q Consensus 81 ~~~~~~---~~~~~~-----~~----~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 122 (129)
...... ...++. +. .+..+.+|++++.+......+.+..++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~ 160 (165)
T 3oga_A 107 DGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLA 160 (165)
T ss_dssp -CCEEEEEEEEEEEEEEESCCCCCCCTTEEEEEEECGGGGGGSCBCHHHHHHHH
T ss_pred CCCceeEEEEEEEEEeeccCCCccCCchheeeEEccHHHHhhCCCCHHHHHHHH
Confidence 543321 111111 11 1246788999887765433344444433
No 24
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.81 E-value=1.6e-19 Score=121.77 Aligned_cols=103 Identities=22% Similarity=0.330 Sum_probs=68.6
Q ss_pred cCEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE
Q 033022 9 RPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT 85 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
+..+++++++.++++||++|.. ++|.|++|||++++||++.+||+||++||||+.+............+.++.....
T Consensus 29 ~~~~~~~i~~~~~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 108 (158)
T 3hhj_A 29 LIVVACALLDQDNRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETFHLL 108 (158)
T ss_dssp EEEEEEEEBCTTSEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSCEEE
T ss_pred EEEEEEEEEeCCCEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCcEEE
Confidence 3456667778889999999985 3589999999999999999999999999999996321000011223455443322
Q ss_pred eEEEEecc----e---eeeeeeeEEecccccCCC
Q 033022 86 KVNRLWGG----E---WHGQAQKWYASLLLLVPL 112 (129)
Q Consensus 86 ~~~~~~~~----~---~~~~~~~W~~~~~~~~~~ 112 (129)
+..|... . .+..+.+|++++.+....
T Consensus 109 -~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 141 (158)
T 3hhj_A 109 -MPLYFCSHYKGVAQGREGQNLKWIFINDLDKYP 141 (158)
T ss_dssp -EEEEEESCCBSCCCCTTSCEEEEEEGGGGGGSC
T ss_pred -EEEEEEEECCCccCCccccceEEEcHHHHhhCC
Confidence 1122111 1 123577899988776533
No 25
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=2.3e-19 Score=125.50 Aligned_cols=55 Identities=20% Similarity=0.357 Sum_probs=49.8
Q ss_pred CcCEEEEEEEeCCC-cEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCc
Q 033022 8 YRPNVGVCLINSDS-QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIV 63 (129)
Q Consensus 8 ~~~~~~~~i~~~~~-~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 63 (129)
.+..+++++++.++ +|||++|.. +|.|.+|||++|+|||+.+||+||++||||+.
T Consensus 44 ~h~~~~~vv~~~~~~~vLL~~r~~-~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 44 AHLTSSAFAVNKERNKFLMIHHNI-YNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEEEEECTTSCEEEEEEETT-TTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred ccEEEEEEEEECCCCEEEEEEecC-CCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 56688888888775 999999874 68999999999999999999999999999998
No 26
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.80 E-value=2.7e-19 Score=120.38 Aligned_cols=57 Identities=23% Similarity=0.312 Sum_probs=50.8
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
.+.++++++++.++++||++|.+. +|.|++|||++++|||+.+||+||++||||+.+
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~ 75 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRL 75 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCC
T ss_pred cEEEEEEEEEcCCCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCC
Confidence 445778888888899999999863 589999999999999999999999999999984
No 27
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.79 E-value=4.7e-19 Score=124.88 Aligned_cols=55 Identities=22% Similarity=0.458 Sum_probs=46.2
Q ss_pred cCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+.+++++|++ +++|||++|.. +|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 68 ~~~v~~vv~~-~~~vLLv~r~~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~ 122 (205)
T 3q1p_A 68 KVDIRAVVFQ-NEKLLFVKEKS-DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVD 122 (205)
T ss_dssp EEEEEEEEEE-TTEEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred cceEEEEEEE-CCEEEEEEEcC-CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccc
Confidence 3466667777 67999999874 6899999999999999999999999999999963
No 28
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.79 E-value=1.2e-18 Score=116.42 Aligned_cols=94 Identities=18% Similarity=0.207 Sum_probs=62.6
Q ss_pred EEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeEeEEEEec
Q 033022 15 CLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTKVNRLWG 92 (129)
Q Consensus 15 ~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (129)
++++.++++||++|.+. +|.|.+|||++++|||+.+||+||++||||+++... ... ....+.++......+..+|.
T Consensus 13 ~ii~~~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~-~~~~~~~~~~~~~~~~~~f~ 90 (153)
T 2b0v_A 13 AVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPE-VLT-GIYHWTCASNGTTYLRFTFS 90 (153)
T ss_dssp EECEETTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEE-EEE-EEEEEEETTTTEEEEEEEEE
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccc-eEE-EEEEEeCCCCCcEEEEEEEE
Confidence 44456789999999853 468999999999999999999999999999996422 111 12234444422222222222
Q ss_pred cee-----------eeeeeeEEecccccC
Q 033022 93 GEW-----------HGQAQKWYASLLLLV 110 (129)
Q Consensus 93 ~~~-----------~~~~~~W~~~~~~~~ 110 (129)
... +..+.+|++++.+..
T Consensus 91 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~ 119 (153)
T 2b0v_A 91 GQVVSFDPDRKLDTGIVRAAWFSIDEIRA 119 (153)
T ss_dssp EEEEEECTTSCCCTTEEEEEEEEHHHHHH
T ss_pred EEeCCCCCCCCCCCCeeeEEEecHHHHhh
Confidence 221 135778999876654
No 29
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.79 E-value=8.8e-19 Score=116.93 Aligned_cols=59 Identities=27% Similarity=0.335 Sum_probs=49.8
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCC---CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.+.+|++++++.++++||+++.+. ++.|++|||++|+|||+++||+||++||||+++..
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~ 65 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASE 65 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSE
T ss_pred eCCEEEEEEEcCCCEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCe
Confidence 345788888898899988776532 24899999999999999999999999999998643
No 30
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.79 E-value=3.7e-19 Score=118.19 Aligned_cols=56 Identities=27% Similarity=0.353 Sum_probs=49.1
Q ss_pred CcCEEEEEEEeC-CCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINS-DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~-~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+++++|++. ++++||++|. +|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~--~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~ 73 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP--NGAYFLPGGEIEGTETKEEAIHREVLEELGISVE 73 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT--TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC--CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeE
Confidence 455777777776 6899999985 4899999999999999999999999999999963
No 31
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.79 E-value=1.2e-18 Score=121.33 Aligned_cols=54 Identities=28% Similarity=0.455 Sum_probs=46.1
Q ss_pred CEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
..++++|.+ +++|||++|.. +|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 5 ~v~~~vi~~-~~~vLL~~r~~-~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~ 58 (188)
T 3fk9_A 5 RVTNCIVVD-HDQVLLLQKPR-RGWWVAPGGKMEAGESILETVKREYWEETGITVK 58 (188)
T ss_dssp EEEEEEEEE-TTEEEEEECTT-TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEES
T ss_pred EEEEEEEEE-CCEEEEEEeCC-CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCC
Confidence 344445554 67999999865 7899999999999999999999999999999863
No 32
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.79 E-value=9.7e-19 Score=121.49 Aligned_cols=59 Identities=27% Similarity=0.368 Sum_probs=52.2
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC----CCCcEEc-CeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~-PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
+++++++++++.++++||++|.. ++|.|++ |||++++|||+++||+||++||||+.+..
T Consensus 31 ~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~ 94 (190)
T 1hzt_A 31 LHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITP 94 (190)
T ss_dssp CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSC
T ss_pred eEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchh
Confidence 45678888888889999999974 3699999 99999999999999999999999999644
No 33
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.3e-19 Score=120.46 Aligned_cols=56 Identities=27% Similarity=0.571 Sum_probs=48.7
Q ss_pred CEEEEEEEeCC-CcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 10 PNVGVCLINSD-SQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 10 ~~~~~~i~~~~-~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
+.++++|++.+ +++||++|.. +|.|.+|||++++|||+.+||+||++||||+.+..
T Consensus 5 ~~~~~~i~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 61 (146)
T 2jvb_A 5 PVRGAAIFNENLSKILLVQGTE-SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTD 61 (146)
T ss_dssp CCEEEEEBCTTSSEEEEECCSS-SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSS
T ss_pred EEEEEEEEeCCCCEEEEEEEcC-CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchH
Confidence 45667777775 8999999875 68999999999999999999999999999998643
No 34
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.79 E-value=1.5e-18 Score=115.63 Aligned_cols=99 Identities=27% Similarity=0.299 Sum_probs=67.4
Q ss_pred CEEEEEEEeCCCcEEEEEEcCC---CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeEe
Q 033022 10 PNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 86 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
..+++++++.++++||++|... +|.|++|||++++|||+.+||.||++||||+.+.... .. ....+.++.....
T Consensus 22 ~~~~~~i~~~~~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~-~~~~~~~~~~~~~- 98 (153)
T 3ees_A 22 IPVVAGFLRKDGKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGE-LK-LACTHSYGDVGIL- 98 (153)
T ss_dssp EEEEEEEEEETTEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCC-EE-EEEEEEETTEEEE-
T ss_pred EEEEEEEEEECCEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCc-eE-EEEEEecCCCeEE-
Confidence 3566667777899999999853 4899999999999999999999999999999863221 11 1134455544332
Q ss_pred EEEEeccee-------eeeeeeEEecccccCC
Q 033022 87 VNRLWGGEW-------HGQAQKWYASLLLLVP 111 (129)
Q Consensus 87 ~~~~~~~~~-------~~~~~~W~~~~~~~~~ 111 (129)
+..|..... +..+..|++++.+...
T Consensus 99 ~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 99 ILFYEILYWKGEPRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEEEEECEEESCCCCSSSSEEEEECGGGGGGS
T ss_pred EEEEEEEECCCCcCCCccceEEEecHHHhhhC
Confidence 222222111 1356789998877653
No 35
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.78 E-value=1.8e-18 Score=115.96 Aligned_cols=54 Identities=20% Similarity=0.409 Sum_probs=47.2
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
++..++++|++ ++++||++| +|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 18 ~~~~~~~ii~~-~~~vLl~~r---~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~ 71 (154)
T 2pqv_A 18 FGVRATALIVQ-NHKLLVTKD---KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQ 71 (154)
T ss_dssp EEEEEEECCEE-TTEEEEEEE---TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEE
T ss_pred EeEEEEEEEEE-CCEEEEEec---CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeee
Confidence 45566666665 579999999 6899999999999999999999999999999964
No 36
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.78 E-value=7.6e-19 Score=115.68 Aligned_cols=56 Identities=36% Similarity=0.592 Sum_probs=47.1
Q ss_pred CEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
..++++|++.++++||++|.. ++|.|++|||++++|||+.+||+||++||||+.+.
T Consensus 9 ~~~~~~ii~~~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~ 67 (140)
T 2rrk_A 9 IEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEAT 67 (140)
T ss_dssp EEEEEEEEEETTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEE
T ss_pred ceEEEEEEEcCCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeee
Confidence 344444557778999999974 35899999999999999999999999999999863
No 37
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.78 E-value=8.2e-19 Score=120.53 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=51.1
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC----CCCcEEc-CeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQM-PQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~-PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.++++++++.++++||++|.. ++|.|++ |||++++|||+.+||+||++||||+.+.
T Consensus 36 ~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~ 98 (180)
T 2fkb_A 36 RHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGV 98 (180)
T ss_dssp CEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSC
T ss_pred eeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 45677888888889999999974 2688999 9999999999999999999999999853
No 38
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.78 E-value=2.2e-18 Score=120.68 Aligned_cols=59 Identities=32% Similarity=0.682 Sum_probs=50.3
Q ss_pred CCcCEEEEEEE--eCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 7 GYRPNVGVCLI--NSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 7 ~~~~~~~~~i~--~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+++..++++++ +.+++|||++|.+.+|.|++|||++|+|||+++||+||++||||+++.
T Consensus 38 ~~~~~~~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~ 98 (194)
T 2fvv_A 38 GYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGT 98 (194)
T ss_dssp SCEEEEEEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEE
T ss_pred CccccEEEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccc
Confidence 35555666666 346899999998778999999999999999999999999999999863
No 39
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.77 E-value=1.4e-18 Score=116.35 Aligned_cols=51 Identities=33% Similarity=0.564 Sum_probs=44.3
Q ss_pred EEEeCCCcEEEEEEcC-CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 15 CLINSDSQIFVASRLN-VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 15 ~i~~~~~~vLl~~r~~-~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
++++.++++||++|.. .+|.|.+|||++++|||+.+||+||++||||+++.
T Consensus 10 ~ii~~~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 61 (153)
T 3shd_A 10 CVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61 (153)
T ss_dssp EEEEETTEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCC
T ss_pred EEEEeCCEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccc
Confidence 4555678999999863 34789999999999999999999999999999963
No 40
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.77 E-value=2.3e-18 Score=117.54 Aligned_cols=54 Identities=28% Similarity=0.462 Sum_probs=43.5
Q ss_pred EEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 11 NVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 11 ~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.+++++++.++++||++|. +|.|.+|||++++|||+.+||+||++||||+.+..
T Consensus 17 ~~~~~ii~~~~~vLL~~r~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~ 70 (163)
T 3f13_A 17 RRATAIIEMPDGVLVTASR--GGRYNLPGGKANRGELRSQALIREIREETGLRINS 70 (163)
T ss_dssp EEEEEECEETTEEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCE
T ss_pred EEEEEEEEeCCEEEEEEEC--CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccce
Confidence 4444555666799999986 58999999999999999999999999999999643
No 41
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.77 E-value=4e-18 Score=118.52 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=65.5
Q ss_pred EEEEEEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeEe--
Q 033022 11 NVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK-- 86 (129)
Q Consensus 11 ~~~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~-- 86 (129)
++++++++ +++|||++|... +|.|.+|||++++|||+++||+||++||||+++.. .... . .+.++......
T Consensus 42 ~v~~ii~~-~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~-~~~~-~--~~~~~~~~~~~~~ 116 (189)
T 3cng_A 42 IVGCIPEW-ENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEI-RELY-A--VYSLPHISQVYML 116 (189)
T ss_dssp EEEEEEEE-TTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEE-EEEE-E--EEEEGGGTEEEEE
T ss_pred EEEEEEEe-CCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCcccc-ceeE-E--EEecCCCcEEEEE
Confidence 56666666 779999999863 58999999999999999999999999999999632 2211 1 23333322111
Q ss_pred -EEEEecc----eeeeeeeeEEeccccc-CCCCcc
Q 033022 87 -VNRLWGG----EWHGQAQKWYASLLLL-VPLTLS 115 (129)
Q Consensus 87 -~~~~~~~----~~~~~~~~W~~~~~~~-~~~~~~ 115 (129)
.+....+ ..+..+.+|++++.+. ..+.++
T Consensus 117 f~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~ 151 (189)
T 3cng_A 117 FRAKLLDLDFFPGIESLEVRLFGEQEIPWNDIAFR 151 (189)
T ss_dssp EEEEECCSCCCCCTTEEEEEEECTTTCCGGGBSCH
T ss_pred EEEEeCCCccCCCccceeEEEECHHHcCcccccCh
Confidence 1111111 1123578999988776 344444
No 42
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.77 E-value=1.2e-18 Score=121.34 Aligned_cols=59 Identities=27% Similarity=0.514 Sum_probs=49.8
Q ss_pred CCcCEEEEEEEeCCC--cEEEEEEcC----CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 7 GYRPNVGVCLINSDS--QIFVASRLN----VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 7 ~~~~~~~~~i~~~~~--~vLl~~r~~----~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+.+.++++++++.++ ++||++|.. .+|.|++|||++++|||+.+||+||++||||+++.
T Consensus 32 ~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 96 (194)
T 1nqz_A 32 HYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPA 96 (194)
T ss_dssp -CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGG
T ss_pred CCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 355677777778777 999999874 46899999999999999999999999999999863
No 43
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.76 E-value=4.1e-18 Score=119.34 Aligned_cols=58 Identities=33% Similarity=0.442 Sum_probs=49.4
Q ss_pred CcCEEEEEEEeC-CCcEEEEEEcC-CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINS-DSQIFVASRLN-VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~-~~~vLl~~r~~-~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+|++++++. +++|||++|.. .+|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 25 ~~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~ 84 (199)
T 3h95_A 25 HQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSE 84 (199)
T ss_dssp -CCEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEE
T ss_pred ccceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccc
Confidence 556777777765 48999999875 35899999999999999999999999999999963
No 44
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.76 E-value=3.7e-18 Score=120.37 Aligned_cols=53 Identities=19% Similarity=0.438 Sum_probs=47.0
Q ss_pred cCEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 9 RPNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
+..++++|+++ ++|||++|. +|.|.+|||++++|||+.+||+||++||||+.+
T Consensus 70 ~~~v~~vv~~~-~~vLLvrr~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~ 122 (206)
T 3o8s_A 70 KLDTRAAIFQE-DKILLVQEN--DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDV 122 (206)
T ss_dssp EEEEEEEEEET-TEEEEEECT--TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEE
T ss_pred CccEEEEEEEC-CEEEEEEec--CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcc
Confidence 34566677764 799999988 689999999999999999999999999999986
No 45
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.75 E-value=8.3e-18 Score=112.74 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=61.7
Q ss_pred CcCEEEEEEEeCCCc----EEEEEEcC--CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCC
Q 033022 8 YRPNVGVCLINSDSQ----IFVASRLN--VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPP 81 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~----vLl~~r~~--~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 81 (129)
.+.+++++|.+ +++ +||++|.. ++| |.+|||++++|||+.+||+||++||||+.+... ... ....+.+..
T Consensus 7 ~~~~~~~ii~~-~~~~~~~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~-~~~~~~~~~ 82 (155)
T 2b06_A 7 TILTNICLIED-LETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNP-QLV-GIKNWPLDT 82 (155)
T ss_dssp EEEEEEEEEEE-TTTTEEEEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC-EEE-EEEEEECTT
T ss_pred cEEEEEEEEEE-CCCCeEEEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCC-cEE-EEEeeccCC
Confidence 45566666666 456 99988875 345 999999999999999999999999999986321 111 112233322
Q ss_pred CeeEeEEEEeccee-------eeeeeeEEecccccCC
Q 033022 82 AVKTKVNRLWGGEW-------HGQAQKWYASLLLLVP 111 (129)
Q Consensus 82 ~~~~~~~~~~~~~~-------~~~~~~W~~~~~~~~~ 111 (129)
........|..... +..+.+|++++.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 83 GGRYIVICYKATEFSGTLQSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp SCEEEEEEEEECEEEECCCCBTTBEEEEEEGGGGGGS
T ss_pred CceEEEEEEEEEecCCCCCCCcceeeEEeeHHHhhhC
Confidence 22222222222111 2356899999877654
No 46
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.75 E-value=1.6e-18 Score=120.18 Aligned_cols=57 Identities=28% Similarity=0.409 Sum_probs=46.8
Q ss_pred CcCEEEEEEEe---C----CCcEEEEEEc---------CCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLIN---S----DSQIFVASRL---------NVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~---~----~~~vLl~~r~---------~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
.+.+|+++|+. . +++|||++|. ..+|.|.+|||++++|||+.+||+||++||||+++
T Consensus 26 ~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~ 98 (187)
T 3i9x_A 26 DGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTD 98 (187)
T ss_dssp SEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCS
T ss_pred ccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCC
Confidence 33566665553 2 3589999993 35689999999999999999999999999999986
No 47
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.75 E-value=4e-18 Score=116.37 Aligned_cols=56 Identities=36% Similarity=0.608 Sum_probs=48.9
Q ss_pred cCEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 9 RPNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
+.+|++++++ ++++||++|.+ .+|.|++|||++|+|||+++||+||++||||+ +..
T Consensus 34 ~~~v~vii~~-~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~ 92 (170)
T 1v8y_A 34 KPAVAVIALR-EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGD 92 (170)
T ss_dssp CCEEEEEEEE-TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcC
Confidence 4578888888 88999998764 35799999999999999999999999999999 643
No 48
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=1.8e-18 Score=119.17 Aligned_cols=56 Identities=27% Similarity=0.393 Sum_probs=49.7
Q ss_pred CEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 10 PNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.++++++++.++++||++|.+ .+|.|++|||++++|||+.+||+||++||||+.+.
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 100 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAE 100 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECS
T ss_pred CEEEEEEEcCCCEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcc
Confidence 477778888889999999874 35799999999999999999999999999999864
No 49
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.75 E-value=8.5e-19 Score=113.82 Aligned_cols=97 Identities=32% Similarity=0.499 Sum_probs=63.5
Q ss_pred EEEEEeCCCcEEEEEEcCC---CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE---e
Q 033022 13 GVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT---K 86 (129)
Q Consensus 13 ~~~i~~~~~~vLl~~r~~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~---~ 86 (129)
++++++.++++||++|... +|.|++|||++++|||+.+||.||++||||+.+... .... ...+.++..... +
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 85 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF-SLFE-KLEYEFPDRHITLWFW 85 (129)
T ss_dssp CEECEETTTEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE-CCCC-CCBCCCSSCEEECCCE
T ss_pred EEEEEecCCEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc-eEEE-EEEEecCCceEEEEEE
Confidence 3445677889999999853 589999999999999999999999999999996432 2221 123344433221 1
Q ss_pred EEEEeccee---eeeeeeEEecccccCC
Q 033022 87 VNRLWGGEW---HGQAQKWYASLLLLVP 111 (129)
Q Consensus 87 ~~~~~~~~~---~~~~~~W~~~~~~~~~ 111 (129)
.+....+.. +..+..|++++.+...
T Consensus 86 ~~~~~~~~~~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 86 LVERWEGEPWGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EEEECSSCCCCCSSCCCEEEESSSCCTT
T ss_pred EEEccCCccCCcccceeEEeCHHHcccc
Confidence 111111111 2345689998877543
No 50
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.75 E-value=7.7e-18 Score=123.52 Aligned_cols=57 Identities=26% Similarity=0.473 Sum_probs=50.2
Q ss_pred CEEEEEEEeC-CCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 10 PNVGVCLINS-DSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 10 ~~~~~~i~~~-~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.++++++++. ++++||++|.+.+|.|.+|||++|+|||+++||+||++||||+++..
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~ 159 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSS 159 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTT
T ss_pred CeEEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCcee
Confidence 4567777776 48999999987779999999999999999999999999999999644
No 51
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.74 E-value=2.7e-17 Score=115.33 Aligned_cols=56 Identities=29% Similarity=0.354 Sum_probs=47.2
Q ss_pred CEEEEEEEeCCCcEEEEEEcCC---CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 10 PNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.+|++++++.+ ++||++|.+. ++.|++|||++|+|||+++||+||++||||+.+..
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~ 108 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGAND 108 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred CEEEEEEEECC-EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCc
Confidence 36666667777 9999987642 36899999999999999999999999999998643
No 52
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.73 E-value=8e-18 Score=120.38 Aligned_cols=58 Identities=21% Similarity=0.328 Sum_probs=49.0
Q ss_pred CcCEEEEEEE---eCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLI---NSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~---~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+|+++|+ +.+++|||++|... +|.|.+|||++++|||+.+||+||++||||+.+.
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~ 74 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENV 74 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSC
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCC
Confidence 3456666776 44679999999863 4899999999999999999999999999999964
No 53
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.73 E-value=3.4e-18 Score=116.57 Aligned_cols=57 Identities=30% Similarity=0.358 Sum_probs=50.8
Q ss_pred cCEEEEEEEeCCCcEEEEEEcC----CCCcEE-cCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 9 RPNVGVCLINSDSQIFVASRLN----VPGAWQ-MPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 9 ~~~~~~~i~~~~~~vLl~~r~~----~~g~w~-~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+.++++++++.++++||++|.. ++|.|+ +|||++++|||+.+||+||++||||+.+.
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 95 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEID 95 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCccc
Confidence 5678888888889999999864 368998 99999999999999999999999999963
No 54
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.72 E-value=3.7e-17 Score=119.79 Aligned_cols=95 Identities=25% Similarity=0.323 Sum_probs=63.9
Q ss_pred EEEEeCCCcEEEEEEcCC-CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeE-eEEEEe
Q 033022 14 VCLINSDSQIFVASRLNV-PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKT-KVNRLW 91 (129)
Q Consensus 14 ~~i~~~~~~vLl~~r~~~-~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 91 (129)
+++++.++++||++|... +|.|++|||++|+|||+++||+||++||||+++..+. .+ ....+.++..... +.....
T Consensus 144 iv~v~~~~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~-~~-~~~~~~~~~~~~~~f~a~~~ 221 (269)
T 1vk6_A 144 IVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLR-YV-TSQPWPFPQSLMTAFMAEYD 221 (269)
T ss_dssp EEEEEETTEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEE-EE-EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEE-EE-EEEecCCCCEEEEEEEEEEC
Confidence 345566789999999864 4899999999999999999999999999999964332 11 1123444433211 122222
Q ss_pred cce-----eeeeeeeEEecccccC
Q 033022 92 GGE-----WHGQAQKWYASLLLLV 110 (129)
Q Consensus 92 ~~~-----~~~~~~~W~~~~~~~~ 110 (129)
.+. -+..+.+||+.+.+..
T Consensus 222 ~~~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 222 SGDIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp ECCCCCCTTTEEEEEEEETTSCCS
T ss_pred CCCcCCCCcceEEEEEEEHHHhhh
Confidence 221 1246789999887754
No 55
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.72 E-value=1.9e-17 Score=115.41 Aligned_cols=57 Identities=18% Similarity=0.283 Sum_probs=47.7
Q ss_pred cCEEEEEEEeC-CCcEEEEEEcC---------CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 9 RPNVGVCLINS-DSQIFVASRLN---------VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 9 ~~~~~~~i~~~-~~~vLl~~r~~---------~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
+.+|++++++. ++++||+++.+ .++.|++|||++| |||+.+||+||++||||+.+..
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~ 111 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGE 111 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSC
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCc
Confidence 35677777775 58999998875 4678999999999 9999999999999999999643
No 56
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.72 E-value=2e-18 Score=122.47 Aligned_cols=58 Identities=16% Similarity=0.330 Sum_probs=46.6
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCCC------CcEEc-CeeecCCCCC--H----HHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNVP------GAWQM-PQGGIEDGED--P----KLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~~------g~w~~-PgG~ve~gEs--~----~~aa~RE~~EEtGl~~~ 65 (129)
++..+..+|+..++++||++|...+ |.|.+ |||+||+||| + ++||+||++||||+++.
T Consensus 66 ~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 66 TKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp EEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeee
Confidence 6777777888788999999997533 68998 9999999999 4 99999999999999853
No 57
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.72 E-value=1.5e-17 Score=119.93 Aligned_cols=57 Identities=26% Similarity=0.496 Sum_probs=47.7
Q ss_pred cCEEEEEEE---eCCCcEEEEEEcCC--CCcEEcCeeecCC--CCCHHHHHHHHHHHHhCCcee
Q 033022 9 RPNVGVCLI---NSDSQIFVASRLNV--PGAWQMPQGGIED--GEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 9 ~~~~~~~i~---~~~~~vLl~~r~~~--~g~w~~PgG~ve~--gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+.+|+++|+ +.+++|||++|... +|.|.+|||++++ |||+.+||+||++||||+++.
T Consensus 22 ~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~ 85 (240)
T 3gz5_A 22 LLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPP 85 (240)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCS
T ss_pred ccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCC
Confidence 346666666 34469999999863 4899999999999 999999999999999999963
No 58
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.71 E-value=3.6e-17 Score=115.28 Aligned_cols=57 Identities=30% Similarity=0.590 Sum_probs=49.8
Q ss_pred CEEEEEEEeCCCcEEEEEEcCC---CCcEEcCeeecC-CCCCHHHHHHHHHHHHhCCceee
Q 033022 10 PNVGVCLINSDSQIFVASRLNV---PGAWQMPQGGIE-DGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~---~g~w~~PgG~ve-~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.+|++++++.++++||++|.+. +|.|++|||+++ +|||+.+||+||++||||+.+..
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~ 104 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQAST 104 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEE
T ss_pred CEEEEEEEcCCCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccc
Confidence 4677788888899999988743 468999999999 99999999999999999999643
No 59
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.70 E-value=1.6e-17 Score=124.23 Aligned_cols=57 Identities=21% Similarity=0.288 Sum_probs=48.6
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+|+++++ .++++||++|.+. +|.|++|||++|+|||+++||+||++||||+++.
T Consensus 202 ~~~~v~~vi~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~ 260 (341)
T 2qjo_A 202 TFITTDAVVV-QAGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVP 260 (341)
T ss_dssp CEEEEEEEEE-ETTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSC
T ss_pred CceEEEEEEE-eCCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccc
Confidence 4456666666 4679999999863 4899999999999999999999999999999963
No 60
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.70 E-value=1.9e-17 Score=124.40 Aligned_cols=57 Identities=30% Similarity=0.364 Sum_probs=48.3
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 8 YRPNVGVCLINSDSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
.+.+++++|+ .++++||++|.+. +|.|++|||++|+|||+++||+||++||||+++.
T Consensus 207 ~~~~v~~vv~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~ 265 (352)
T 2qjt_B 207 NFVTVDALVI-VNDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLT 265 (352)
T ss_dssp EEEEEEEEEE-ETTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCC
T ss_pred CceEEEEEEE-ECCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcc
Confidence 3445666666 5679999999864 4899999999999999999999999999999853
No 61
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.68 E-value=2e-16 Score=111.77 Aligned_cols=57 Identities=23% Similarity=0.350 Sum_probs=48.2
Q ss_pred CEEEEEEEe-CCCcEEEEEEcCC--------CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceee
Q 033022 10 PNVGVCLIN-SDSQIFVASRLNV--------PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAE 66 (129)
Q Consensus 10 ~~~~~~i~~-~~~~vLl~~r~~~--------~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~ 66 (129)
.+|++++++ .++++||+++.+. ++.|++|||++|+|||+++||+||++||||+.+..
T Consensus 58 ~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~ 123 (209)
T 1g0s_A 58 HAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKR 123 (209)
T ss_dssp CEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCC
T ss_pred CEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCc
Confidence 577777888 5689999876542 35799999999999999999999999999999643
No 62
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.68 E-value=2.1e-16 Score=112.66 Aligned_cols=56 Identities=21% Similarity=0.243 Sum_probs=48.5
Q ss_pred cCEEEEEEEeC-CCcEEEEEEcC---C-------------------------------CCcEEcCeeecCC-CCCHHHHH
Q 033022 9 RPNVGVCLINS-DSQIFVASRLN---V-------------------------------PGAWQMPQGGIED-GEDPKLAA 52 (129)
Q Consensus 9 ~~~~~~~i~~~-~~~vLl~~r~~---~-------------------------------~g~w~~PgG~ve~-gEs~~~aa 52 (129)
+.+|++++++. ++++||+++.+ . ++.|++|||++|+ |||+++||
T Consensus 36 ~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA 115 (218)
T 3q91_A 36 HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVA 115 (218)
T ss_dssp CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHHHHH
T ss_pred CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHHHHH
Confidence 56888888884 57899988764 1 4689999999999 99999999
Q ss_pred HHHHHHHhCCce
Q 033022 53 MRELREETGIVS 64 (129)
Q Consensus 53 ~RE~~EEtGl~~ 64 (129)
+||++||||+.+
T Consensus 116 ~REl~EEtGl~~ 127 (218)
T 3q91_A 116 CKEAWEECGYHL 127 (218)
T ss_dssp HHHHHHHHCBCC
T ss_pred HHHHHHHhCCcc
Confidence 999999999986
No 63
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.66 E-value=1.4e-16 Score=120.72 Aligned_cols=43 Identities=33% Similarity=0.561 Sum_probs=40.0
Q ss_pred CcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 21 SQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 21 ~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
.+|||++|.. .|.|++|||++|+|||+++||+||++||||+++
T Consensus 38 ~~vLLv~r~~-~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~ 80 (364)
T 3fjy_A 38 IEVCIVHRPK-YDDWSWPKGKLEQNETHRHAAVREIGEETGSPV 80 (364)
T ss_dssp EEEEEEEETT-TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCE
T ss_pred eEEEEEEcCC-CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCee
Confidence 4899999965 589999999999999999999999999999996
No 64
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.65 E-value=8.4e-17 Score=108.08 Aligned_cols=54 Identities=26% Similarity=0.446 Sum_probs=44.8
Q ss_pred EEEEEEEeC---CCcEEEEEEcC---CCCcEEcCeeecCCCCCHH-HHHHHHHHHHhC-Cce
Q 033022 11 NVGVCLINS---DSQIFVASRLN---VPGAWQMPQGGIEDGEDPK-LAAMRELREETG-IVS 64 (129)
Q Consensus 11 ~~~~~i~~~---~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~-~aa~RE~~EEtG-l~~ 64 (129)
.++++|.+. ++++||++|.. ++|.|+||||++++||++. +||+||++|||| +.+
T Consensus 21 ~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~ 82 (155)
T 1x51_A 21 SATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPA 82 (155)
T ss_dssp EEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCS
T ss_pred EEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcce
Confidence 444455554 47999999875 3589999999999999996 999999999999 764
No 65
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.65 E-value=8.2e-16 Score=108.66 Aligned_cols=57 Identities=33% Similarity=0.459 Sum_probs=45.0
Q ss_pred cCEEEEEEEe-CC---CcEEEEEEcCC---CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCcee
Q 033022 9 RPNVGVCLIN-SD---SQIFVASRLNV---PGAWQMPQGGIEDGEDPKLAAMRELREETGIVSA 65 (129)
Q Consensus 9 ~~~~~~~i~~-~~---~~vLl~~r~~~---~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 65 (129)
+.+|+++.+. .+ +++||+++.+. ++.|++|||++++||++++||+||++||||+.+.
T Consensus 61 ~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~ 124 (212)
T 2dsc_A 61 ADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 124 (212)
T ss_dssp CSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred CCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 3466665443 22 47999886542 3589999999999999999999999999999954
No 66
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.64 E-value=1.1e-15 Score=112.03 Aligned_cols=57 Identities=25% Similarity=0.459 Sum_probs=46.6
Q ss_pred CcCEEEEEEEe--C---CCcEEEEEEcCC--CCcEEcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLIN--S---DSQIFVASRLNV--PGAWQMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~--~---~~~vLl~~r~~~--~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
.+.+|+++|+. . +++|||++|... +|.|.+|||++++|||+.+||+||++||||+++
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v 101 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVI 101 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCC
Confidence 34466666653 2 348999999864 489999999999999999999999999999763
No 67
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.63 E-value=6.4e-16 Score=117.61 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=67.9
Q ss_pred CEEEEEEEeCCCcEEEEEEcC---CCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCceeeEEeecCceEEeecCCCeeEe
Q 033022 10 PNVGVCLINSDSQIFVASRLN---VPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPPAVKTK 86 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~---~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
..++++|.+.+++|||++|.. ++|.|+||||++|+| |+++|+.||++||||+.+... . ....+.|.|++....
T Consensus 241 ~~~~~vi~~~~g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~-~-~l~~~~h~~~h~~~~- 316 (369)
T 3fsp_A 241 PLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELT-E-PIVSFEHAFSHLVWQ- 316 (369)
T ss_dssp EEEEEEEECSSSEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEEC-C-CCCEEEEECSSEEEE-
T ss_pred EEEEEEEEeCCCEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeee-c-ccccEEEEcceEEEE-
Confidence 345566777889999999985 458999999999999 999999999999999996322 1 222345666554322
Q ss_pred EEEEecc-----eeeeeeeeEEecccccC
Q 033022 87 VNRLWGG-----EWHGQAQKWYASLLLLV 110 (129)
Q Consensus 87 ~~~~~~~-----~~~~~~~~W~~~~~~~~ 110 (129)
+ .++.. ..+.++.+|++++.+..
T Consensus 317 ~-~~~~~~~~~~~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 317 L-TVFPGRLVHGGPVEEPYRLAPEDELKA 344 (369)
T ss_dssp E-EEEEEEECCSSCCCTTEEEEEGGGGGG
T ss_pred E-EEEEEEEcCCCCCccccEEeeHHHhhh
Confidence 2 22222 22356789999887654
No 68
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.63 E-value=2e-16 Score=112.09 Aligned_cols=46 Identities=24% Similarity=0.310 Sum_probs=41.4
Q ss_pred eCCCcEEEEEEcCCCCcEEcCeeecCCCC-CHHHHHHHHHHHHhCCcee
Q 033022 18 NSDSQIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSA 65 (129)
Q Consensus 18 ~~~~~vLl~~r~~~~g~w~~PgG~ve~gE-s~~~aa~RE~~EEtGl~~~ 65 (129)
+.++++||++| ++|.|++|||++|+|| |+++||+||++||||+.+.
T Consensus 53 ~~~~~vLl~~r--~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~ 99 (212)
T 1u20_A 53 PIRRVLLMMMR--FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALA 99 (212)
T ss_dssp ECCEEEEEEEE--TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGG
T ss_pred ecCCEEEEEEe--CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 45678999988 3699999999999999 9999999999999999964
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.61 E-value=4.1e-15 Score=106.96 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=50.8
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC----CCCcEEcCe-eecCCC------CC---HHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQ-GGIEDG------ED---PKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~Pg-G~ve~g------Es---~~~aa~RE~~EEtGl~~ 64 (129)
+++++++++++.++++||++|+. +||.|++|+ |++++| |+ +.+||+||++||||+.+
T Consensus 58 ~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~ 128 (235)
T 2dho_A 58 LHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPL 128 (235)
T ss_dssp CEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCG
T ss_pred eEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCc
Confidence 67788889999889999999974 579999995 999999 88 59999999999999985
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.60 E-value=3.8e-15 Score=107.82 Aligned_cols=57 Identities=26% Similarity=0.381 Sum_probs=51.0
Q ss_pred CcCEEEEEEEeCCCcEEEEEEcC----CCCcEEcCe-eecCCC------CCH---HHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLINSDSQIFVASRLN----VPGAWQMPQ-GGIEDG------EDP---KLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~~~~~vLl~~r~~----~~g~w~~Pg-G~ve~g------Es~---~~aa~RE~~EEtGl~~ 64 (129)
+++++++++++.++++||+||+. +||.|++|+ |++++| |++ .+||+||++||||+.+
T Consensus 69 ~h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~ 139 (246)
T 2pny_A 69 LHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPG 139 (246)
T ss_dssp CEEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCT
T ss_pred EEEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCc
Confidence 67788888999889999999973 579999996 999999 887 9999999999999984
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=1.1e-14 Score=104.51 Aligned_cols=59 Identities=24% Similarity=0.449 Sum_probs=49.9
Q ss_pred CCCcCEEEEEEEeCC--C--cEEEEEEcC----CCCcEEcCeeecCCCCC--------------------HHHHHHHHHH
Q 033022 6 SGYRPNVGVCLINSD--S--QIFVASRLN----VPGAWQMPQGGIEDGED--------------------PKLAAMRELR 57 (129)
Q Consensus 6 ~~~~~~~~~~i~~~~--~--~vLl~~r~~----~~g~w~~PgG~ve~gEs--------------------~~~aa~RE~~ 57 (129)
...|.++++++++.+ + +|||++|.. .+|.|.||||+|+++|+ +..||+||++
T Consensus 5 ~~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~ 84 (232)
T 3qsj_A 5 TDIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETA 84 (232)
T ss_dssp CCEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHH
Confidence 347788888777643 3 899999985 36899999999999997 5899999999
Q ss_pred HHhCCce
Q 033022 58 EETGIVS 64 (129)
Q Consensus 58 EEtGl~~ 64 (129)
||||+.+
T Consensus 85 EE~Gl~l 91 (232)
T 3qsj_A 85 EEIGWLL 91 (232)
T ss_dssp HHHSCCC
T ss_pred HHhCcee
Confidence 9999985
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.49 E-value=2e-13 Score=101.31 Aligned_cols=57 Identities=18% Similarity=0.238 Sum_probs=50.9
Q ss_pred CcCEEEEEEEeCCC---cEEEEEEcC----CCCcE-EcCeeecCCCCCHHHHHHHHHHHHhCCce
Q 033022 8 YRPNVGVCLINSDS---QIFVASRLN----VPGAW-QMPQGGIEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 8 ~~~~~~~~i~~~~~---~vLl~~r~~----~~g~w-~~PgG~ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
.+.+|-+.+++.++ ++||.||+. +||.| .+|+|++++|||+.+||+||+.||+|+..
T Consensus 117 ~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~ 181 (300)
T 3dup_A 117 RAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPE 181 (300)
T ss_dssp CEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCH
T ss_pred EEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCCh
Confidence 56678888888776 899999984 78999 58999999999999999999999999985
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.46 E-value=7.7e-14 Score=103.20 Aligned_cols=41 Identities=29% Similarity=0.462 Sum_probs=38.6
Q ss_pred cEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCCc
Q 033022 22 QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIV 63 (129)
Q Consensus 22 ~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 63 (129)
++||++|.. .|.|.+|||+|++|||+.+||+||++||||+.
T Consensus 140 ~vLl~~r~~-~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~ 180 (292)
T 1q33_A 140 QFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEALNS 180 (292)
T ss_dssp EEEEEECTT-TCSEECCCEECCTTCCHHHHHHHHHHHHHSCG
T ss_pred EEEEEEecC-CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCc
Confidence 699999976 58999999999999999999999999999997
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.40 E-value=1.9e-13 Score=97.20 Aligned_cols=42 Identities=31% Similarity=0.446 Sum_probs=37.2
Q ss_pred cEEEEEEcCCCCcEEcCeeecCCCC-CHHHHHHHHHHHHhCCcee
Q 033022 22 QIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGIVSA 65 (129)
Q Consensus 22 ~vLl~~r~~~~g~w~~PgG~ve~gE-s~~~aa~RE~~EEtGl~~~ 65 (129)
++||+.|. +|.|++|||++|+|| |+++||+||++||||+.+.
T Consensus 66 ~~ll~~r~--~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~ 108 (217)
T 2xsq_A 66 AILMQMRF--DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAA 108 (217)
T ss_dssp EEEEEEET--TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGG
T ss_pred cEEEEEcc--CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCc
Confidence 46666665 589999999999999 9999999999999999864
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.34 E-value=4.7e-12 Score=88.71 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=44.8
Q ss_pred CCcCEEEEEEE-eCCC--cEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHhCC
Q 033022 7 GYRPNVGVCLI-NSDS--QIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGI 62 (129)
Q Consensus 7 ~~~~~~~~~i~-~~~~--~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl 62 (129)
|.|+.|.++++ +..+ +|||+|+. .+.|.+|||++|+||+.++|++||+.||+|.
T Consensus 56 g~R~sV~avil~~~~~~phVLLlq~~--~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 56 GMRRTVEGVLIVHEHRLPHVLLLQLG--TTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEEE--TTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEcCCCCcEEEEEEcC--CCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 45666666554 4444 79999985 4699999999999999999999999999995
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.33 E-value=7.2e-13 Score=92.16 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=44.3
Q ss_pred CCCcCEEEEEEEeCC-----C------cEEEEEEcCCCCcEEcCeeecCCCC-CHHHHHHHHHHHHhCC
Q 033022 6 SGYRPNVGVCLINSD-----S------QIFVASRLNVPGAWQMPQGGIEDGE-DPKLAAMRELREETGI 62 (129)
Q Consensus 6 ~~~~~~~~~~i~~~~-----~------~vLl~~r~~~~g~w~~PgG~ve~gE-s~~~aa~RE~~EEtGl 62 (129)
+++|.++-+++.-.+ + .+|++.|. +|.|+||||+||+|| |+++|+.||+.||+|+
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~--~G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRF--DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEET--TSCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeee--CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 468899999887554 2 25556654 599999999999999 9999999999999997
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.21 E-value=2.7e-11 Score=90.66 Aligned_cols=89 Identities=15% Similarity=0.215 Sum_probs=53.9
Q ss_pred CEEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCCHHHHHHHHHHHHh-CCceeeEEeecCceEEeecCCCeeEe--
Q 033022 10 PNVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREET-GIVSAEIIAEVPNWLTYDFPPAVKTK-- 86 (129)
Q Consensus 10 ~~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEt-Gl~~~~~~~~~~~~~~~~~~~~~~~~-- 86 (129)
..|+++ +..+++|||+ .+ .| |.+|||.++.++ .++|+||++||| |+++. +...+. .|+.+.....+
T Consensus 184 ~~vgai-i~~~g~vLL~--~~-~G-W~LPG~~~~~~~--~~~a~RE~~EEttGl~v~-~~~L~~---v~~~~~~~~~~i~ 252 (321)
T 3rh7_A 184 IRLGAV-LEQQGAVFLA--GN-ET-LSLPNCTVEGGD--PARTLAAYLEQLTGLNVT-IGFLYS---VYEDKSDGRQNIV 252 (321)
T ss_dssp EEEEEE-EESSSCEEEB--CS-SE-EBCCEEEESSSC--HHHHHHHHHHHHHSSCEE-EEEEEE---EEECTTTCCEEEE
T ss_pred ceEEEE-EEECCEEEEe--eC-CC-ccCCcccCCCCh--hHHHHHHHHHHhcCCEEe-eceEEE---EEEcCCCceEEEE
Confidence 344444 4556899999 32 57 999988665444 469999999997 99963 222221 23333332222
Q ss_pred -EEEEecceeeeeeeeEEecccccCC
Q 033022 87 -VNRLWGGEWHGQAQKWYASLLLLVP 111 (129)
Q Consensus 87 -~~~~~~~~~~~~~~~W~~~~~~~~~ 111 (129)
.+....+. ..+.+||.++.++..
T Consensus 253 f~~~~~~g~--~~e~~~f~~~elp~~ 276 (321)
T 3rh7_A 253 YHALASDGA--PRQGRFLRPAELAAA 276 (321)
T ss_dssp EEEEECSSC--CSSSEEECHHHHTTC
T ss_pred EEEEeCCCC--eeeeEEECHHHCCCc
Confidence 22222222 367899999887654
No 78
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=52.14 E-value=21 Score=22.75 Aligned_cols=22 Identities=18% Similarity=0.061 Sum_probs=19.5
Q ss_pred CCCCCHHHHHHHHHHHHhCCce
Q 033022 43 EDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 43 e~gEs~~~aa~RE~~EEtGl~~ 64 (129)
..|+++.+.+.||+.+-+|..+
T Consensus 96 rdg~~L~~~L~~el~~~~g~~v 117 (129)
T 3t3l_A 96 HDGVSLHELLAAELTKALKTKL 117 (129)
T ss_dssp TTCCBHHHHHHHHHHHHHTSCC
T ss_pred CCCchHHHHHHHHHHHHhCCce
Confidence 4589999999999999999874
No 79
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=32.61 E-value=47 Score=20.23 Aligned_cols=22 Identities=14% Similarity=0.039 Sum_probs=19.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCce
Q 033022 43 EDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 43 e~gEs~~~aa~RE~~EEtGl~~ 64 (129)
..|+++.+.+.+|+.+-+|..+
T Consensus 82 r~g~~L~~~L~~e~~~~~g~~v 103 (106)
T 1ew4_A 82 RSGETFWDLLEQAATQQAGETV 103 (106)
T ss_dssp TTCCBHHHHHHHHHHHHHTSCC
T ss_pred CCCchHHHHHHHHHHHHhCCCc
Confidence 4588999999999999999763
No 80
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=27.74 E-value=54 Score=20.68 Aligned_cols=19 Identities=11% Similarity=0.143 Sum_probs=15.5
Q ss_pred CCCCCHHHHHHHHHHHHhC
Q 033022 43 EDGEDPKLAAMRELREETG 61 (129)
Q Consensus 43 e~gEs~~~aa~RE~~EEtG 61 (129)
..|+++.+.+.||+.+-++
T Consensus 102 r~g~~l~~~L~~el~~~~~ 120 (123)
T 3oeq_A 102 RNGTKLTDILTEEVEKAIS 120 (123)
T ss_dssp TTCCBHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhc
Confidence 4578999999999987654
No 81
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=27.36 E-value=30 Score=18.36 Aligned_cols=13 Identities=31% Similarity=0.386 Sum_probs=9.5
Q ss_pred CHHHHHHHHHHHH
Q 033022 47 DPKLAAMRELREE 59 (129)
Q Consensus 47 s~~~aa~RE~~EE 59 (129)
|-.-.|+||++|-
T Consensus 39 SdF~~aVREVYEh 51 (53)
T 1zl8_A 39 SEFFGAVREVYET 51 (53)
T ss_dssp CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4455689999984
No 82
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=26.92 E-value=81 Score=24.38 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=34.0
Q ss_pred EEEEEEEeCCCcEEEEEEcCCCCcEEcCeeecCCC-CCHH---HHHHHHHHHHhCCceee
Q 033022 11 NVGVCLINSDSQIFVASRLNVPGAWQMPQGGIEDG-EDPK---LAAMRELREETGIVSAE 66 (129)
Q Consensus 11 ~~~~~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~g-Es~~---~aa~RE~~EEtGl~~~~ 66 (129)
.+-++++|.+++++-..+...+ .+....|.+|-+ +... ..++|++.++.|+...+
T Consensus 15 s~Ka~l~d~~G~~va~~~~~~~-~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 15 SSRAVVMDHDANIISVSQREFE-QIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 73 (526)
T ss_dssp EEEEEEECTTCCEEEEEEEECC-CBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred ceeeeEEcCCCCEEEEEEEecC-cccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 5667889999998875554323 222233666533 2222 34688999999987533
No 83
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=23.96 E-value=98 Score=16.94 Aligned_cols=31 Identities=10% Similarity=0.395 Sum_probs=18.3
Q ss_pred CEEEE-EEEeCCCcEEEEEEcCCCCcEEcCeeecCCCCC
Q 033022 10 PNVGV-CLINSDSQIFVASRLNVPGAWQMPQGGIEDGED 47 (129)
Q Consensus 10 ~~~~~-~i~~~~~~vLl~~r~~~~g~w~~PgG~ve~gEs 47 (129)
..++. -+-+.+..+++++ +.+.||.-+||-|
T Consensus 41 qgvacstvkdgnkdvymik-------fslaggsndpggs 72 (77)
T 1kvd_B 41 QGVACSTVKDGNKDVYMIK-------FSLAGGSNDPGGS 72 (77)
T ss_dssp CEEEEEEEEETTEEEEEEE-------EEECSCCSCCCSC
T ss_pred cceeeeeeecCCccEEEEE-------EEeccCCCCCCCC
Confidence 34444 4556666788876 4555666666544
No 84
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=22.64 E-value=41 Score=18.54 Aligned_cols=13 Identities=0% Similarity=0.281 Sum_probs=11.2
Q ss_pred HHHHHHHHhCCce
Q 033022 52 AMRELREETGIVS 64 (129)
Q Consensus 52 a~RE~~EEtGl~~ 64 (129)
-+|++.||||..+
T Consensus 26 ~I~~I~e~tg~~I 38 (71)
T 1vig_A 26 NINRIKDQYKVSV 38 (71)
T ss_dssp HHHHHHHHTCCEE
T ss_pred cHHHHHHHHCCEE
Confidence 4789999999984
No 85
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=21.70 E-value=71 Score=18.35 Aligned_cols=15 Identities=20% Similarity=0.169 Sum_probs=12.1
Q ss_pred ecCCCCCHHHHHHHH
Q 033022 41 GIEDGEDPKLAAMRE 55 (129)
Q Consensus 41 ~ve~gEs~~~aa~RE 55 (129)
.+++|+|+.++|.+.
T Consensus 16 ~~~~g~tlL~a~~~~ 30 (93)
T 1wri_A 16 DVEPGERLIDIGSEK 30 (93)
T ss_dssp EECTTSCHHHHHHHH
T ss_pred EECCCCcHHHHHHHC
Confidence 367899999998764
No 86
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=20.68 E-value=65 Score=18.44 Aligned_cols=18 Identities=22% Similarity=0.147 Sum_probs=14.0
Q ss_pred cCCCCCHHHHHHHHHHHHhCCce
Q 033022 42 IEDGEDPKLAAMRELREETGIVS 64 (129)
Q Consensus 42 ve~gEs~~~aa~RE~~EEtGl~~ 64 (129)
+++|+|+.++|.+ .|+.+
T Consensus 17 ~~~g~tlL~a~~~-----~gi~i 34 (95)
T 1frr_A 17 VPEGTTILDAAEE-----AGYDL 34 (95)
T ss_dssp ECTTCCHHHHHHH-----TTCCC
T ss_pred eCCCCcHHHHHHH-----cCCCC
Confidence 6789999999866 47763
No 87
>2vld_A NUCS, UPF0286 protein pyrab01260; endonuclease, hydrolase; 2.60A {Pyrococcus abyssi}
Probab=20.10 E-value=95 Score=22.03 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=24.6
Q ss_pred EEEEEEEeCCCcEEEEEEcC-CCCcEEcCeeecCC
Q 033022 11 NVGVCLINSDSQIFVASRLN-VPGAWQMPQGGIED 44 (129)
Q Consensus 11 ~~~~~i~~~~~~vLl~~r~~-~~g~w~~PgG~ve~ 44 (129)
+-.++++..||.+|+..-.. .|-.|..|+..++.
T Consensus 50 ~~rli~iK~DGsvlvH~~~~~~P~nW~pp~~~~~~ 84 (251)
T 2vld_A 50 GDRIIIIKPDGSFLIHQNKKREPVNWQPPGSKVTF 84 (251)
T ss_dssp EEEEEEECTTSCEEEECSSCSSCSEEECTTCEEEE
T ss_pred CcEEEEEcCCCeEEEeCCCCCCCcccCCCCCccee
Confidence 45567778888888865443 45679999988874
No 88
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=20.08 E-value=82 Score=18.08 Aligned_cols=17 Identities=18% Similarity=0.001 Sum_probs=13.7
Q ss_pred cCCCCCHHHHHHHHHHHHhCCc
Q 033022 42 IEDGEDPKLAAMRELREETGIV 63 (129)
Q Consensus 42 ve~gEs~~~aa~RE~~EEtGl~ 63 (129)
+++|+|+.++|.+ .|+.
T Consensus 16 ~~~g~tlL~a~~~-----~gi~ 32 (94)
T 1awd_A 16 CPEDTYILDAAEE-----AGLD 32 (94)
T ss_dssp CCTTSCHHHHHHH-----TTCC
T ss_pred ECCCCcHHHHHHH-----cCCC
Confidence 6789999999876 4775
Done!