BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033025
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 101/126 (80%)
Query: 1 MCAELNQSYTMAQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQW 60
+C +LNQ + A FF++ ITPLQSGCCKPPT CGY FVNPT W++P N AAD DC W
Sbjct: 143 VCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFVNPTLWLNPTNMAADADCYLW 202
Query: 61 GNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDLF 120
NDQ QLCYNC+SCKAGLL NL+KEWR+ ++ILI+T+V LI VY+I C AFRN +TEDLF
Sbjct: 203 SNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAFRNAQTEDLF 262
Query: 121 RKYKQG 126
RKYKQG
Sbjct: 263 RKYKQG 268
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
Query: 1 MCAELNQSYTMAQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQW 60
+C ELNQ YT+AQDFFNAH + P+QSGCCKPPT+CG+TFVNPTYWISPI+ +ADMDCL W
Sbjct: 143 ICPELNQRYTLAQDFFNAH-LDPIQSGCCKPPTKCGFTFVNPTYWISPIDMSADMDCLNW 201
Query: 61 GNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDLF 120
NDQ LCY CDSCKAGLLAN+K +W + DI L++ L+ LI+VY+IGCCAFRN +TED+F
Sbjct: 202 SNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLIIVYIIGCCAFRNAETEDIF 261
Query: 121 RKYKQG 126
RKYKQG
Sbjct: 262 RKYKQG 267
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 4 ELNQSYTMAQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQWGND 63
EL + DF+ D+T +SGCCKP +C +T++ T W + + DC W N+
Sbjct: 149 ELVTANHTVSDFYK-EDLTAFESGCCKPSNDCDFTYITSTTWNKTSGTHKNSDCQLWDNE 207
Query: 64 QMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTEDLFR 121
+ +LCYNC +CKAG L NLK W+RV I+ I+ LV L++VY +GCCAFRN+K + R
Sbjct: 208 KHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCAFRNNKEDRYGR 265
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 14 DFFNAHDITPLQSGCCKPPTECGYTFVNPTYW------ISPINSAADMDCLQWGNDQMQL 67
D F ++P++SGCCKPPT+CG+++VN T W I P + DC+ W NDQ L
Sbjct: 160 DMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGP-----NQDCMVWSNDQSML 214
Query: 68 CYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTED 118
CY C SCKAG+L +LKK WR+V +I IV L+ L++ Y+I A+RN K D
Sbjct: 215 CYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNVKRID 265
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
Query: 14 DFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINS----AADMDCLQWGNDQMQLCY 69
D F +++P+QSGCCKPP++C + F N T+WI P + A + DC W N Q +LC+
Sbjct: 158 DAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSKNETAVAENGDCGTWSNVQTELCF 217
Query: 70 NCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKT 116
NC++CKAG+LAN++++WR + + I L+ LI VY GCCA RN++T
Sbjct: 218 NCNACKAGVLANIREKWRNLLVFNICLLILLITVYSCGCCARRNNRT 264
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 4/125 (3%)
Query: 1 MCAELNQSYTMA--QDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSA-ADMDC 57
+C++L + F+ H +T LQSGCCKP ECG+ +VNPT W + DC
Sbjct: 144 VCSKLEAKFVNVPVNSFYKEH-LTALQSGCCKPSDECGFEYVNPTTWTKNTTGTHTNPDC 202
Query: 58 LQWGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTE 117
W N + +LC++C SCKAGLL N+K W++V I+ IV LV LI+VY +GCCAFRN+K +
Sbjct: 203 QTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRD 262
Query: 118 DLFRK 122
D + +
Sbjct: 263 DSYSR 267
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 12 AQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQWGNDQMQLCYNC 71
+DF+ + ++ LQSGCCKP +C +T+VNPT W + DC W N LCY+C
Sbjct: 157 VEDFYKS-NLNALQSGCCKPSNDCNFTYVNPTTWTKTPGPYKNEDCNVWDNKPGTLCYDC 215
Query: 72 DSCKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKTED 118
++CKAGLL N+K W++V + IV L+ LI+VY +GCCAFRN++
Sbjct: 216 EACKAGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFRNNRKRS 262
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 16 FNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAA-DMDCLQWGNDQMQLCYNCDSC 74
F +++P++SGCCKPPT+CGYT+VN T WI + DC+ W NDQ LCY C SC
Sbjct: 162 FYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSC 221
Query: 75 KAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDK 115
KAG+L +LKK WR+V +I IV ++ L++ Y+I C A++N K
Sbjct: 222 KAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNVK 262
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Query: 20 DITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQWGNDQMQLCYNCDSCKAGLL 79
D++PLQSGCCKPPT C Y + D DC +W N LCY+CD+C+AG+L
Sbjct: 159 DLSPLQSGCCKPPTSCVYN--------TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVL 210
Query: 80 ANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDK 115
++++W ++ ++ ++ ++ LI VY +GCCAF+N K
Sbjct: 211 ETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNAK 246
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 2 CAELNQSYTMAQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINS-AADMDCLQW 60
C +L++ Y + +A ++TP+++GCC+PP+ECGY VN +Y+ +S +++ DC +
Sbjct: 145 CRKLSKKYKTIKQLKSA-ELTPIEAGCCRPPSECGYPAVNASYYDLSFHSISSNKDCKLY 203
Query: 61 GNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALI 101
N + CYNCDSCKAG+ +K EWR V I +V V LI
Sbjct: 204 KNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLI 244
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 16 FNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADM--DCLQWGNDQMQLCYNCDS 73
F++ ++ +Q GCC+PP ECG+ N T+W P + + DC W N Q QLCY C+S
Sbjct: 155 FDSKHLSNVQFGCCRPPVECGFESKNATWWTVPATATTAIIGDCKAWSNTQRQLCYACES 214
Query: 74 CKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDKT 116
CK G+L ++K WR + ++ ++ ++ ++ +Y GCC +N++
Sbjct: 215 CKIGVLKGIRKRWRILIVVNLLLILLVVFLYSCGCCVRKNNRV 257
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 10/102 (9%)
Query: 14 DFFNAHDITPLQSGCCKPPTECGYTFVNPTYWISPINSAADMDCLQWGNDQMQLCYNCDS 73
D+F D+T +QSGCCKPPT C TY ++ D C +W N LCY CD+
Sbjct: 154 DYFQ-RDMTSVQSGCCKPPTAC-------TYEAGVVDGGGD--CFRWNNGVEMLCYECDA 203
Query: 74 CKAGLLANLKKEWRRVDIILIVTLVALILVYLIGCCAFRNDK 115
CKAG+L ++ +WR++ ++ I+ LV LI VY GCCAF N +
Sbjct: 204 CKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNTR 245
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 1 MCAELNQSYTMAQDFFNAHDITPLQSGCCKPPTECGYTFVNPTYW-ISPINSAADMDCLQ 59
+C LN M F ++TP+QSGCCKPP CG + P W +S + ++DC +
Sbjct: 161 VCNRLNHK--MPASEFYQMNLTPIQSGCCKPPLSCGLNYEKPNNWTVSRYYNNLEVDCKR 218
Query: 60 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVAL 100
W N LC++CDSCKA ++A++ + + +I + +L
Sbjct: 219 WNNSADTLCFDCDSCKAVIIADVHNTSFSITVNIIHIIFSL 259
>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 16 FNAHDITPLQSGCCKPPTECGYTFVNPTYWI-----SPINSAADM-----------DCLQ 59
+N + P+++GCC PP C +N T+W P +S M DC
Sbjct: 199 YNRRKMPPIKNGCCMPPETCNMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRISDCQL 258
Query: 60 WGNDQMQLCYNCDSCKAGLLANLKKEWRRVDIILIVTLVALILVYLI 106
W ND LCY+C SCK G + +++++W ++ I LIV + L++ +L+
Sbjct: 259 WRNDWSILCYDCRSCKFGFIRSVRRKWWQLGIFLIVISILLLMSHLL 305
>sp|Q58G33|TET14_ARATH Tetraspanin-14 OS=Arabidopsis thaliana GN=TET14 PE=2 SV=1
Length = 260
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 27/100 (27%)
Query: 15 FFNAHDITP--------LQSGCCKPPTECGYTFVNPTYWIS------PINSAADMDCL-- 58
F N++ + P +++GCC P C VN T W++ P+ +A D
Sbjct: 148 FVNSYALPPYDRRLLPSVKTGCCNRPGNCKLETVNATLWVTRNREGPPLETAMIYDRYGG 207
Query: 59 ---------QWGNDQMQLCYNCDSCKAGLLAN--LKKEWR 87
W ++ L Y+C +C+ ++ + L+K W+
Sbjct: 208 NADIKDYYDMWRHELSVLYYDCMTCQVRIIKSPRLRKWWQ 247
>sp|P47658|DPO3X_MYCGE DNA polymerase III subunit gamma/tau OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=dnaX PE=3
SV=3
Length = 597
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 52 AADMDCLQWGNDQMQLCYNCDSCKA 76
A ++CL W DQ+ +C +CD CK+
Sbjct: 58 AKAINCLNW--DQIDVCNSCDVCKS 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.466
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,473,017
Number of Sequences: 539616
Number of extensions: 1758974
Number of successful extensions: 5120
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5090
Number of HSP's gapped (non-prelim): 22
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)